Multiple sequence alignment - TraesCS3B01G298200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G298200 chr3B 100.000 3231 0 0 1 3231 478324393 478321163 0.000000e+00 5967.0
1 TraesCS3B01G298200 chr3B 83.217 143 16 8 1000 1138 103722710 103722572 1.220000e-24 124.0
2 TraesCS3B01G298200 chr3D 89.134 2770 146 75 342 3048 367237591 367234914 0.000000e+00 3304.0
3 TraesCS3B01G298200 chr3D 89.231 130 10 3 3096 3223 367234796 367234669 3.340000e-35 159.0
4 TraesCS3B01G298200 chr3D 80.124 161 24 8 1000 1155 63460955 63460798 2.630000e-21 113.0
5 TraesCS3B01G298200 chr3A 90.478 2111 114 42 342 2412 489312597 489310534 0.000000e+00 2704.0
6 TraesCS3B01G298200 chr3A 86.761 778 48 26 2411 3167 489310297 489309554 0.000000e+00 815.0
7 TraesCS3B01G298200 chr3A 84.375 96 12 3 253 346 724148119 724148213 1.230000e-14 91.6
8 TraesCS3B01G298200 chr1D 90.210 143 14 0 1001 1143 459880642 459880500 1.530000e-43 187.0
9 TraesCS3B01G298200 chr1D 92.553 94 7 0 1596 1689 459880277 459880184 5.620000e-28 135.0
10 TraesCS3B01G298200 chr1A 90.278 144 12 2 1001 1143 551593136 551592994 1.530000e-43 187.0
11 TraesCS3B01G298200 chr1A 91.837 98 7 1 1596 1693 551592780 551592684 5.620000e-28 135.0
12 TraesCS3B01G298200 chr1A 85.417 96 8 4 253 344 590863614 590863521 9.540000e-16 95.3
13 TraesCS3B01G298200 chr1B 87.417 151 16 3 994 1143 631967724 631967576 1.540000e-38 171.0
14 TraesCS3B01G298200 chr1B 92.553 94 7 0 1596 1689 631967367 631967274 5.620000e-28 135.0
15 TraesCS3B01G298200 chr5B 83.333 144 19 5 1004 1144 391144733 391144874 9.410000e-26 128.0
16 TraesCS3B01G298200 chr5B 86.813 91 6 4 253 340 540345366 540345279 2.650000e-16 97.1
17 TraesCS3B01G298200 chr5A 82.639 144 20 5 1004 1144 436089153 436089294 4.380000e-24 122.0
18 TraesCS3B01G298200 chr7B 91.860 86 7 0 1591 1676 561280494 561280409 1.570000e-23 121.0
19 TraesCS3B01G298200 chr7D 90.698 86 8 0 1591 1676 524915755 524915670 7.320000e-22 115.0
20 TraesCS3B01G298200 chr7A 90.698 86 8 0 1591 1676 604853602 604853517 7.320000e-22 115.0
21 TraesCS3B01G298200 chr7A 86.905 84 10 1 253 336 672137003 672137085 3.430000e-15 93.5
22 TraesCS3B01G298200 chr6B 89.412 85 9 0 1592 1676 652629938 652629854 1.230000e-19 108.0
23 TraesCS3B01G298200 chr4B 88.172 93 8 3 253 343 659070716 659070807 1.230000e-19 108.0
24 TraesCS3B01G298200 chr6D 86.813 91 11 1 250 339 4787779 4787689 2.050000e-17 100.0
25 TraesCS3B01G298200 chr2A 84.694 98 13 2 253 349 97849296 97849200 2.650000e-16 97.1
26 TraesCS3B01G298200 chr2A 83.962 106 10 7 253 354 19613240 19613138 9.540000e-16 95.3
27 TraesCS3B01G298200 chr5D 86.364 88 7 5 266 352 454269578 454269495 1.230000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G298200 chr3B 478321163 478324393 3230 True 5967.0 5967 100.0000 1 3231 1 chr3B.!!$R2 3230
1 TraesCS3B01G298200 chr3D 367234669 367237591 2922 True 1731.5 3304 89.1825 342 3223 2 chr3D.!!$R2 2881
2 TraesCS3B01G298200 chr3A 489309554 489312597 3043 True 1759.5 2704 88.6195 342 3167 2 chr3A.!!$R1 2825


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
226 227 0.029700 TGACTTGAGAACGCGAACGA 59.970 50.0 15.93 0.00 43.93 3.85 F
247 248 0.030908 GGTAAGACGAGGGCAGATCG 59.969 60.0 4.72 4.72 45.54 3.69 F
283 284 0.108615 AAAGGCAGACAGATCGGACG 60.109 55.0 0.00 0.00 32.39 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1262 1334 0.179034 AATCAGGAAGCTCGATGGCC 60.179 55.0 0.00 0.0 0.00 5.36 R
1535 1607 0.747852 TACGTGACACACTGCAGGAA 59.252 50.0 19.93 0.0 31.34 3.36 R
2278 2365 0.319040 CCATCGACGACTAGGCATGG 60.319 60.0 0.00 0.0 32.78 3.66 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.748503 GCCACGTAACAAACAAAAAGAC 57.251 40.909 0.00 0.00 0.00 3.01
22 23 4.167268 GCCACGTAACAAACAAAAAGACA 58.833 39.130 0.00 0.00 0.00 3.41
23 24 4.030865 GCCACGTAACAAACAAAAAGACAC 59.969 41.667 0.00 0.00 0.00 3.67
24 25 5.154932 CCACGTAACAAACAAAAAGACACA 58.845 37.500 0.00 0.00 0.00 3.72
25 26 5.629849 CCACGTAACAAACAAAAAGACACAA 59.370 36.000 0.00 0.00 0.00 3.33
26 27 6.144080 CCACGTAACAAACAAAAAGACACAAA 59.856 34.615 0.00 0.00 0.00 2.83
27 28 6.999055 CACGTAACAAACAAAAAGACACAAAC 59.001 34.615 0.00 0.00 0.00 2.93
28 29 6.919115 ACGTAACAAACAAAAAGACACAAACT 59.081 30.769 0.00 0.00 0.00 2.66
29 30 8.074972 ACGTAACAAACAAAAAGACACAAACTA 58.925 29.630 0.00 0.00 0.00 2.24
30 31 8.360132 CGTAACAAACAAAAAGACACAAACTAC 58.640 33.333 0.00 0.00 0.00 2.73
31 32 9.182933 GTAACAAACAAAAAGACACAAACTACA 57.817 29.630 0.00 0.00 0.00 2.74
32 33 8.825667 AACAAACAAAAAGACACAAACTACAT 57.174 26.923 0.00 0.00 0.00 2.29
33 34 9.915629 AACAAACAAAAAGACACAAACTACATA 57.084 25.926 0.00 0.00 0.00 2.29
34 35 9.567848 ACAAACAAAAAGACACAAACTACATAG 57.432 29.630 0.00 0.00 0.00 2.23
35 36 9.019764 CAAACAAAAAGACACAAACTACATAGG 57.980 33.333 0.00 0.00 0.00 2.57
36 37 7.875327 ACAAAAAGACACAAACTACATAGGT 57.125 32.000 0.00 0.00 0.00 3.08
37 38 8.967664 ACAAAAAGACACAAACTACATAGGTA 57.032 30.769 0.00 0.00 0.00 3.08
38 39 8.833493 ACAAAAAGACACAAACTACATAGGTAC 58.167 33.333 0.00 0.00 0.00 3.34
39 40 8.832521 CAAAAAGACACAAACTACATAGGTACA 58.167 33.333 0.00 0.00 0.00 2.90
40 41 8.967664 AAAAGACACAAACTACATAGGTACAA 57.032 30.769 0.00 0.00 0.00 2.41
41 42 7.958053 AAGACACAAACTACATAGGTACAAC 57.042 36.000 0.00 0.00 0.00 3.32
42 43 7.299246 AGACACAAACTACATAGGTACAACT 57.701 36.000 0.00 0.00 0.00 3.16
43 44 7.732996 AGACACAAACTACATAGGTACAACTT 58.267 34.615 0.00 0.00 0.00 2.66
44 45 8.208903 AGACACAAACTACATAGGTACAACTTT 58.791 33.333 0.00 0.00 0.00 2.66
45 46 8.741603 ACACAAACTACATAGGTACAACTTTT 57.258 30.769 0.00 0.00 0.00 2.27
46 47 9.835389 ACACAAACTACATAGGTACAACTTTTA 57.165 29.630 0.00 0.00 0.00 1.52
63 64 9.921637 ACAACTTTTATTTTCTTGAGAAACACA 57.078 25.926 5.71 0.00 43.01 3.72
65 66 9.921637 AACTTTTATTTTCTTGAGAAACACACA 57.078 25.926 5.71 0.00 43.01 3.72
66 67 9.353999 ACTTTTATTTTCTTGAGAAACACACAC 57.646 29.630 5.71 0.00 43.01 3.82
67 68 7.962934 TTTATTTTCTTGAGAAACACACACG 57.037 32.000 5.71 0.00 43.01 4.49
68 69 5.811399 ATTTTCTTGAGAAACACACACGA 57.189 34.783 5.71 0.00 43.01 4.35
69 70 5.811399 TTTTCTTGAGAAACACACACGAT 57.189 34.783 5.71 0.00 43.01 3.73
70 71 5.403897 TTTCTTGAGAAACACACACGATC 57.596 39.130 2.16 0.00 38.94 3.69
71 72 4.053469 TCTTGAGAAACACACACGATCA 57.947 40.909 0.00 0.00 0.00 2.92
72 73 3.802139 TCTTGAGAAACACACACGATCAC 59.198 43.478 0.00 0.00 0.00 3.06
73 74 3.172229 TGAGAAACACACACGATCACA 57.828 42.857 0.00 0.00 0.00 3.58
74 75 3.526534 TGAGAAACACACACGATCACAA 58.473 40.909 0.00 0.00 0.00 3.33
75 76 3.935828 TGAGAAACACACACGATCACAAA 59.064 39.130 0.00 0.00 0.00 2.83
76 77 4.201773 TGAGAAACACACACGATCACAAAC 60.202 41.667 0.00 0.00 0.00 2.93
77 78 3.938963 AGAAACACACACGATCACAAACT 59.061 39.130 0.00 0.00 0.00 2.66
78 79 3.673746 AACACACACGATCACAAACTG 57.326 42.857 0.00 0.00 0.00 3.16
79 80 2.627945 ACACACACGATCACAAACTGT 58.372 42.857 0.00 0.00 0.00 3.55
89 90 2.967459 CACAAACTGTGCGCTAATCA 57.033 45.000 9.73 1.90 41.89 2.57
90 91 3.266541 CACAAACTGTGCGCTAATCAA 57.733 42.857 9.73 0.00 41.89 2.57
91 92 3.626977 CACAAACTGTGCGCTAATCAAA 58.373 40.909 9.73 0.00 41.89 2.69
92 93 4.041049 CACAAACTGTGCGCTAATCAAAA 58.959 39.130 9.73 0.00 41.89 2.44
93 94 4.041723 ACAAACTGTGCGCTAATCAAAAC 58.958 39.130 9.73 0.00 0.00 2.43
94 95 3.980646 AACTGTGCGCTAATCAAAACA 57.019 38.095 9.73 0.07 0.00 2.83
95 96 3.980646 ACTGTGCGCTAATCAAAACAA 57.019 38.095 9.73 0.00 0.00 2.83
96 97 3.628017 ACTGTGCGCTAATCAAAACAAC 58.372 40.909 9.73 0.00 0.00 3.32
97 98 3.315191 ACTGTGCGCTAATCAAAACAACT 59.685 39.130 9.73 0.00 0.00 3.16
98 99 4.513692 ACTGTGCGCTAATCAAAACAACTA 59.486 37.500 9.73 0.00 0.00 2.24
99 100 5.029650 TGTGCGCTAATCAAAACAACTAG 57.970 39.130 9.73 0.00 0.00 2.57
100 101 3.846335 GTGCGCTAATCAAAACAACTAGC 59.154 43.478 9.73 0.00 33.24 3.42
101 102 3.751175 TGCGCTAATCAAAACAACTAGCT 59.249 39.130 9.73 0.00 34.19 3.32
102 103 4.142902 TGCGCTAATCAAAACAACTAGCTC 60.143 41.667 9.73 0.00 34.19 4.09
103 104 4.569029 CGCTAATCAAAACAACTAGCTCG 58.431 43.478 0.00 0.00 34.19 5.03
104 105 4.326278 CGCTAATCAAAACAACTAGCTCGA 59.674 41.667 0.00 0.00 34.19 4.04
105 106 5.163992 CGCTAATCAAAACAACTAGCTCGAA 60.164 40.000 0.00 0.00 34.19 3.71
106 107 6.244275 GCTAATCAAAACAACTAGCTCGAAG 58.756 40.000 0.00 0.00 33.68 3.79
107 108 5.613358 AATCAAAACAACTAGCTCGAAGG 57.387 39.130 0.00 0.00 0.00 3.46
108 109 2.806244 TCAAAACAACTAGCTCGAAGGC 59.194 45.455 0.00 0.00 0.00 4.35
109 110 2.543777 AAACAACTAGCTCGAAGGCA 57.456 45.000 0.00 0.00 34.17 4.75
110 111 2.086054 AACAACTAGCTCGAAGGCAG 57.914 50.000 0.00 0.00 34.17 4.85
111 112 1.257743 ACAACTAGCTCGAAGGCAGA 58.742 50.000 0.00 0.00 34.17 4.26
112 113 1.067495 ACAACTAGCTCGAAGGCAGAC 60.067 52.381 0.00 0.00 34.17 3.51
113 114 0.171455 AACTAGCTCGAAGGCAGACG 59.829 55.000 0.00 0.00 34.17 4.18
114 115 1.587613 CTAGCTCGAAGGCAGACGC 60.588 63.158 0.00 0.00 37.44 5.19
125 126 3.337398 GCAGACGCCAAAACAAACA 57.663 47.368 0.00 0.00 0.00 2.83
126 127 1.634702 GCAGACGCCAAAACAAACAA 58.365 45.000 0.00 0.00 0.00 2.83
127 128 1.996191 GCAGACGCCAAAACAAACAAA 59.004 42.857 0.00 0.00 0.00 2.83
128 129 2.222707 GCAGACGCCAAAACAAACAAAC 60.223 45.455 0.00 0.00 0.00 2.93
129 130 2.027451 CAGACGCCAAAACAAACAAACG 59.973 45.455 0.00 0.00 0.00 3.60
130 131 0.716666 ACGCCAAAACAAACAAACGC 59.283 45.000 0.00 0.00 0.00 4.84
131 132 0.716108 CGCCAAAACAAACAAACGCA 59.284 45.000 0.00 0.00 0.00 5.24
132 133 1.266793 CGCCAAAACAAACAAACGCAG 60.267 47.619 0.00 0.00 0.00 5.18
133 134 1.996191 GCCAAAACAAACAAACGCAGA 59.004 42.857 0.00 0.00 0.00 4.26
134 135 2.029124 GCCAAAACAAACAAACGCAGAG 59.971 45.455 0.00 0.00 0.00 3.35
135 136 2.602660 CCAAAACAAACAAACGCAGAGG 59.397 45.455 0.00 0.00 0.00 3.69
136 137 1.921243 AAACAAACAAACGCAGAGGC 58.079 45.000 0.00 0.00 0.00 4.70
137 138 0.102300 AACAAACAAACGCAGAGGCC 59.898 50.000 0.00 0.00 36.38 5.19
138 139 1.034838 ACAAACAAACGCAGAGGCCA 61.035 50.000 5.01 0.00 36.38 5.36
139 140 0.102120 CAAACAAACGCAGAGGCCAA 59.898 50.000 5.01 0.00 36.38 4.52
140 141 0.102300 AAACAAACGCAGAGGCCAAC 59.898 50.000 5.01 0.00 36.38 3.77
141 142 1.734388 AACAAACGCAGAGGCCAACC 61.734 55.000 5.01 0.00 36.38 3.77
142 143 2.978010 AAACGCAGAGGCCAACCG 60.978 61.111 5.01 4.36 42.76 4.44
153 154 4.368808 CCAACCGCACGCGACTTG 62.369 66.667 15.93 12.91 42.83 3.16
154 155 3.334751 CAACCGCACGCGACTTGA 61.335 61.111 15.93 0.00 42.83 3.02
155 156 3.335534 AACCGCACGCGACTTGAC 61.336 61.111 15.93 0.00 42.83 3.18
156 157 4.578898 ACCGCACGCGACTTGACA 62.579 61.111 15.93 0.00 42.83 3.58
157 158 3.334751 CCGCACGCGACTTGACAA 61.335 61.111 15.93 0.00 42.83 3.18
158 159 2.128128 CGCACGCGACTTGACAAC 60.128 61.111 15.93 0.00 42.83 3.32
159 160 2.248431 GCACGCGACTTGACAACC 59.752 61.111 15.93 0.00 0.00 3.77
160 161 2.544359 CACGCGACTTGACAACCG 59.456 61.111 15.93 1.95 0.00 4.44
161 162 2.660552 ACGCGACTTGACAACCGG 60.661 61.111 15.93 0.00 0.00 5.28
162 163 4.072088 CGCGACTTGACAACCGGC 62.072 66.667 0.00 0.00 0.00 6.13
163 164 3.723348 GCGACTTGACAACCGGCC 61.723 66.667 0.00 0.00 0.00 6.13
164 165 3.047877 CGACTTGACAACCGGCCC 61.048 66.667 0.00 0.00 0.00 5.80
165 166 2.112297 GACTTGACAACCGGCCCA 59.888 61.111 0.00 0.00 0.00 5.36
166 167 1.527380 GACTTGACAACCGGCCCAA 60.527 57.895 0.00 0.00 0.00 4.12
167 168 1.076632 ACTTGACAACCGGCCCAAA 60.077 52.632 0.00 0.00 0.00 3.28
168 169 0.684805 ACTTGACAACCGGCCCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
169 170 0.461961 CTTGACAACCGGCCCAAAAA 59.538 50.000 0.00 0.00 0.00 1.94
186 187 0.105964 AAAAACAAAGAAGGGCCCGC 59.894 50.000 18.44 13.37 0.00 6.13
187 188 1.754380 AAAACAAAGAAGGGCCCGCC 61.754 55.000 18.44 12.62 0.00 6.13
202 203 4.237207 GCCCCGCTGTAGCCCTAC 62.237 72.222 0.00 0.00 37.91 3.18
203 204 2.762459 CCCCGCTGTAGCCCTACA 60.762 66.667 7.81 7.81 43.14 2.74
210 211 2.591915 TGTAGCCCTACAGCCTGAC 58.408 57.895 0.00 0.00 40.77 3.51
211 212 0.041238 TGTAGCCCTACAGCCTGACT 59.959 55.000 0.00 0.00 40.77 3.41
212 213 1.196012 GTAGCCCTACAGCCTGACTT 58.804 55.000 0.00 0.00 36.15 3.01
213 214 1.134670 GTAGCCCTACAGCCTGACTTG 60.135 57.143 0.00 0.00 36.15 3.16
214 215 0.545309 AGCCCTACAGCCTGACTTGA 60.545 55.000 0.00 0.00 0.00 3.02
215 216 0.107945 GCCCTACAGCCTGACTTGAG 60.108 60.000 0.00 0.00 0.00 3.02
216 217 1.561643 CCCTACAGCCTGACTTGAGA 58.438 55.000 0.00 0.00 0.00 3.27
217 218 1.902508 CCCTACAGCCTGACTTGAGAA 59.097 52.381 0.00 0.00 0.00 2.87
218 219 2.354203 CCCTACAGCCTGACTTGAGAAC 60.354 54.545 0.00 0.00 0.00 3.01
219 220 2.600731 CTACAGCCTGACTTGAGAACG 58.399 52.381 0.00 0.00 0.00 3.95
220 221 0.601311 ACAGCCTGACTTGAGAACGC 60.601 55.000 0.00 0.00 0.00 4.84
221 222 1.373497 AGCCTGACTTGAGAACGCG 60.373 57.895 3.53 3.53 0.00 6.01
222 223 1.372997 GCCTGACTTGAGAACGCGA 60.373 57.895 15.93 0.00 0.00 5.87
223 224 0.944311 GCCTGACTTGAGAACGCGAA 60.944 55.000 15.93 0.00 0.00 4.70
224 225 0.784778 CCTGACTTGAGAACGCGAAC 59.215 55.000 15.93 6.10 0.00 3.95
226 227 0.029700 TGACTTGAGAACGCGAACGA 59.970 50.000 15.93 0.00 43.93 3.85
227 228 1.335597 TGACTTGAGAACGCGAACGAT 60.336 47.619 15.93 0.00 43.93 3.73
228 229 1.057847 GACTTGAGAACGCGAACGATG 59.942 52.381 15.93 0.00 43.93 3.84
229 230 0.366871 CTTGAGAACGCGAACGATGG 59.633 55.000 15.93 0.00 43.93 3.51
230 231 0.319211 TTGAGAACGCGAACGATGGT 60.319 50.000 15.93 0.00 43.93 3.55
231 232 0.522626 TGAGAACGCGAACGATGGTA 59.477 50.000 15.93 0.00 43.93 3.25
232 233 1.068402 TGAGAACGCGAACGATGGTAA 60.068 47.619 15.93 0.00 43.93 2.85
233 234 1.582502 GAGAACGCGAACGATGGTAAG 59.417 52.381 15.93 0.00 43.93 2.34
234 235 1.200716 AGAACGCGAACGATGGTAAGA 59.799 47.619 15.93 0.00 43.93 2.10
235 236 1.319669 GAACGCGAACGATGGTAAGAC 59.680 52.381 15.93 0.00 43.93 3.01
236 237 0.795735 ACGCGAACGATGGTAAGACG 60.796 55.000 15.93 0.00 43.93 4.18
237 238 0.521867 CGCGAACGATGGTAAGACGA 60.522 55.000 0.00 0.00 43.93 4.20
238 239 1.189403 GCGAACGATGGTAAGACGAG 58.811 55.000 0.00 0.00 0.00 4.18
239 240 1.823828 CGAACGATGGTAAGACGAGG 58.176 55.000 0.00 0.00 0.00 4.63
240 241 1.533338 CGAACGATGGTAAGACGAGGG 60.533 57.143 0.00 0.00 0.00 4.30
241 242 0.175073 AACGATGGTAAGACGAGGGC 59.825 55.000 0.00 0.00 0.00 5.19
242 243 0.968901 ACGATGGTAAGACGAGGGCA 60.969 55.000 0.00 0.00 0.00 5.36
243 244 0.249073 CGATGGTAAGACGAGGGCAG 60.249 60.000 0.00 0.00 0.00 4.85
244 245 1.112113 GATGGTAAGACGAGGGCAGA 58.888 55.000 0.00 0.00 0.00 4.26
245 246 1.689273 GATGGTAAGACGAGGGCAGAT 59.311 52.381 0.00 0.00 0.00 2.90
246 247 1.112113 TGGTAAGACGAGGGCAGATC 58.888 55.000 0.00 0.00 0.00 2.75
247 248 0.030908 GGTAAGACGAGGGCAGATCG 59.969 60.000 4.72 4.72 45.54 3.69
248 249 0.595310 GTAAGACGAGGGCAGATCGC 60.595 60.000 6.00 1.55 43.91 4.58
249 250 2.060004 TAAGACGAGGGCAGATCGCG 62.060 60.000 0.00 0.00 43.91 5.87
250 251 3.889044 GACGAGGGCAGATCGCGA 61.889 66.667 13.09 13.09 43.91 5.87
251 252 3.815569 GACGAGGGCAGATCGCGAG 62.816 68.421 16.66 1.42 43.91 5.03
252 253 3.893763 CGAGGGCAGATCGCGAGT 61.894 66.667 16.66 0.37 43.84 4.18
253 254 2.279120 GAGGGCAGATCGCGAGTG 60.279 66.667 16.66 15.79 43.84 3.51
254 255 4.521062 AGGGCAGATCGCGAGTGC 62.521 66.667 29.05 29.05 43.84 4.40
268 269 2.166007 CGAGTGCGCGAAAATTAAAGG 58.834 47.619 12.10 0.00 0.00 3.11
269 270 1.911464 GAGTGCGCGAAAATTAAAGGC 59.089 47.619 12.10 0.00 0.00 4.35
270 271 1.268352 AGTGCGCGAAAATTAAAGGCA 59.732 42.857 12.10 0.00 0.00 4.75
271 272 1.648681 GTGCGCGAAAATTAAAGGCAG 59.351 47.619 12.10 0.00 0.00 4.85
272 273 1.537638 TGCGCGAAAATTAAAGGCAGA 59.462 42.857 12.10 0.00 0.00 4.26
273 274 1.911464 GCGCGAAAATTAAAGGCAGAC 59.089 47.619 12.10 0.00 0.00 3.51
274 275 2.667171 GCGCGAAAATTAAAGGCAGACA 60.667 45.455 12.10 0.00 0.00 3.41
275 276 3.163594 CGCGAAAATTAAAGGCAGACAG 58.836 45.455 0.00 0.00 0.00 3.51
276 277 3.120338 CGCGAAAATTAAAGGCAGACAGA 60.120 43.478 0.00 0.00 0.00 3.41
277 278 4.437390 CGCGAAAATTAAAGGCAGACAGAT 60.437 41.667 0.00 0.00 0.00 2.90
278 279 5.030936 GCGAAAATTAAAGGCAGACAGATC 58.969 41.667 0.00 0.00 0.00 2.75
279 280 5.258622 CGAAAATTAAAGGCAGACAGATCG 58.741 41.667 0.00 0.00 0.00 3.69
280 281 5.567138 AAAATTAAAGGCAGACAGATCGG 57.433 39.130 0.00 0.00 0.00 4.18
281 282 4.487714 AATTAAAGGCAGACAGATCGGA 57.512 40.909 0.00 0.00 0.00 4.55
282 283 2.961526 TAAAGGCAGACAGATCGGAC 57.038 50.000 0.00 0.00 0.00 4.79
283 284 0.108615 AAAGGCAGACAGATCGGACG 60.109 55.000 0.00 0.00 32.39 4.79
284 285 1.949847 AAGGCAGACAGATCGGACGG 61.950 60.000 0.00 0.00 32.39 4.79
285 286 2.583593 GCAGACAGATCGGACGGC 60.584 66.667 0.00 2.03 0.00 5.68
286 287 3.069980 GCAGACAGATCGGACGGCT 62.070 63.158 11.90 0.00 0.00 5.52
287 288 1.226802 CAGACAGATCGGACGGCTG 60.227 63.158 0.00 11.79 35.81 4.85
288 289 2.105128 GACAGATCGGACGGCTGG 59.895 66.667 15.76 0.00 34.05 4.85
289 290 2.362503 ACAGATCGGACGGCTGGA 60.363 61.111 15.76 0.00 34.05 3.86
290 291 2.105128 CAGATCGGACGGCTGGAC 59.895 66.667 0.00 0.00 0.00 4.02
291 292 2.362503 AGATCGGACGGCTGGACA 60.363 61.111 0.00 0.00 0.00 4.02
292 293 1.758514 AGATCGGACGGCTGGACAT 60.759 57.895 0.00 0.00 0.00 3.06
293 294 1.144057 GATCGGACGGCTGGACATT 59.856 57.895 0.00 0.00 0.00 2.71
294 295 0.462047 GATCGGACGGCTGGACATTT 60.462 55.000 0.00 0.00 0.00 2.32
295 296 0.828022 ATCGGACGGCTGGACATTTA 59.172 50.000 0.00 0.00 0.00 1.40
296 297 0.174845 TCGGACGGCTGGACATTTAG 59.825 55.000 0.00 0.00 0.00 1.85
297 298 0.174845 CGGACGGCTGGACATTTAGA 59.825 55.000 0.00 0.00 0.00 2.10
298 299 1.202533 CGGACGGCTGGACATTTAGAT 60.203 52.381 0.00 0.00 0.00 1.98
299 300 2.213499 GGACGGCTGGACATTTAGATG 58.787 52.381 0.00 0.00 39.25 2.90
301 302 2.609459 GACGGCTGGACATTTAGATGTG 59.391 50.000 3.18 0.00 46.27 3.21
302 303 2.236146 ACGGCTGGACATTTAGATGTGA 59.764 45.455 3.18 0.00 46.27 3.58
303 304 2.868583 CGGCTGGACATTTAGATGTGAG 59.131 50.000 3.18 1.19 46.27 3.51
304 305 3.430790 CGGCTGGACATTTAGATGTGAGA 60.431 47.826 3.18 0.00 46.27 3.27
305 306 4.712476 GGCTGGACATTTAGATGTGAGAT 58.288 43.478 3.18 0.00 46.27 2.75
306 307 5.509670 CGGCTGGACATTTAGATGTGAGATA 60.510 44.000 3.18 0.00 46.27 1.98
307 308 6.291377 GGCTGGACATTTAGATGTGAGATAA 58.709 40.000 3.18 0.00 46.27 1.75
308 309 6.203723 GGCTGGACATTTAGATGTGAGATAAC 59.796 42.308 3.18 0.00 46.27 1.89
309 310 6.989169 GCTGGACATTTAGATGTGAGATAACT 59.011 38.462 3.18 0.00 46.27 2.24
310 311 8.144478 GCTGGACATTTAGATGTGAGATAACTA 58.856 37.037 3.18 0.00 46.27 2.24
395 406 0.652592 CAACAAGTGGCCGATCGATC 59.347 55.000 18.66 15.68 0.00 3.69
420 431 0.526211 TCTCGCGCACAAGTACAGAT 59.474 50.000 8.75 0.00 0.00 2.90
426 437 1.066858 CGCACAAGTACAGATGGAGGT 60.067 52.381 0.00 0.00 0.00 3.85
427 438 2.612972 CGCACAAGTACAGATGGAGGTT 60.613 50.000 0.00 0.00 0.00 3.50
428 439 3.003480 GCACAAGTACAGATGGAGGTTC 58.997 50.000 0.00 0.00 0.00 3.62
438 455 9.830186 AGTACAGATGGAGGTTCATTATAGTAT 57.170 33.333 0.00 0.00 0.00 2.12
439 456 9.862371 GTACAGATGGAGGTTCATTATAGTATG 57.138 37.037 0.00 0.00 0.00 2.39
440 457 8.727100 ACAGATGGAGGTTCATTATAGTATGA 57.273 34.615 0.00 0.00 32.87 2.15
441 458 8.589338 ACAGATGGAGGTTCATTATAGTATGAC 58.411 37.037 0.00 0.00 34.41 3.06
442 459 8.037758 CAGATGGAGGTTCATTATAGTATGACC 58.962 40.741 0.00 0.00 34.41 4.02
443 460 7.734865 AGATGGAGGTTCATTATAGTATGACCA 59.265 37.037 0.00 0.00 34.41 4.02
444 461 7.062749 TGGAGGTTCATTATAGTATGACCAC 57.937 40.000 0.00 0.00 34.41 4.16
547 564 4.143514 CGCGCGAAACCAAAATTTATTTGA 60.144 37.500 28.94 0.00 0.00 2.69
575 596 1.683025 TCCACGGAGCGGGACAATA 60.683 57.895 0.00 0.00 28.17 1.90
711 735 1.426041 CCCAGTATAAAACGCGCGCT 61.426 55.000 32.58 17.02 0.00 5.92
735 759 1.147153 CCCTGCAAGCCTACTAGCC 59.853 63.158 0.00 0.00 0.00 3.93
736 760 1.341156 CCCTGCAAGCCTACTAGCCT 61.341 60.000 0.00 0.00 0.00 4.58
737 761 0.543749 CCTGCAAGCCTACTAGCCTT 59.456 55.000 0.00 0.00 0.00 4.35
738 762 1.661341 CTGCAAGCCTACTAGCCTTG 58.339 55.000 2.92 2.92 0.00 3.61
739 763 0.253044 TGCAAGCCTACTAGCCTTGG 59.747 55.000 8.49 2.22 0.00 3.61
743 767 3.884226 GCCTACTAGCCTTGGCTTT 57.116 52.632 19.93 9.76 41.92 3.51
764 788 3.885521 GCCTTCCATCTGCTGCGC 61.886 66.667 0.00 0.00 0.00 6.09
765 789 2.124819 CCTTCCATCTGCTGCGCT 60.125 61.111 9.73 0.00 0.00 5.92
766 790 2.470362 CCTTCCATCTGCTGCGCTG 61.470 63.158 9.73 10.04 0.00 5.18
767 791 3.109612 CTTCCATCTGCTGCGCTGC 62.110 63.158 29.76 29.76 0.00 5.25
768 792 3.905437 TTCCATCTGCTGCGCTGCA 62.905 57.895 34.91 34.91 41.05 4.41
769 793 3.436924 CCATCTGCTGCGCTGCAA 61.437 61.111 36.00 27.24 42.83 4.08
770 794 2.100410 CATCTGCTGCGCTGCAAG 59.900 61.111 36.00 28.73 42.83 4.01
852 885 0.447801 CGCCCAGGAAACTTTGATCG 59.552 55.000 0.00 0.00 40.21 3.69
855 888 2.356069 GCCCAGGAAACTTTGATCGATC 59.644 50.000 18.72 18.72 40.21 3.69
873 909 1.300931 CCATCCATACGCCCTGTCG 60.301 63.158 0.00 0.00 0.00 4.35
874 910 1.441729 CATCCATACGCCCTGTCGT 59.558 57.895 0.00 0.00 45.49 4.34
875 911 0.875908 CATCCATACGCCCTGTCGTG 60.876 60.000 0.00 0.00 43.21 4.35
876 912 2.644555 ATCCATACGCCCTGTCGTGC 62.645 60.000 0.00 0.00 43.21 5.34
877 913 2.890474 CATACGCCCTGTCGTGCC 60.890 66.667 0.00 0.00 43.21 5.01
928 964 4.379243 CCTCAACGGCAGGCTCGT 62.379 66.667 0.00 0.00 43.14 4.18
929 965 3.114616 CTCAACGGCAGGCTCGTG 61.115 66.667 1.75 0.00 40.96 4.35
930 966 3.865929 CTCAACGGCAGGCTCGTGT 62.866 63.158 1.75 0.00 40.96 4.49
932 968 2.665185 AACGGCAGGCTCGTGTTC 60.665 61.111 1.75 0.00 40.96 3.18
937 974 1.204312 GCAGGCTCGTGTTCGTTTC 59.796 57.895 0.00 0.00 38.33 2.78
939 976 2.170273 GGCTCGTGTTCGTTTCGC 59.830 61.111 0.00 0.00 38.33 4.70
972 1009 4.690719 AATTCGGCGGCGTGGTGA 62.691 61.111 31.06 8.65 0.00 4.02
974 1011 2.581208 AATTCGGCGGCGTGGTGATA 62.581 55.000 31.06 6.96 0.00 2.15
1144 1185 1.667756 CGCAGAAAGCAGGTACGTACA 60.668 52.381 26.02 0.00 46.13 2.90
1214 1278 0.251698 GGGGACGGACTAGATAGGGG 60.252 65.000 0.00 0.00 0.00 4.79
1244 1316 2.319096 CGGCGGCGTCCTTTGTTAA 61.319 57.895 24.74 0.00 0.00 2.01
1259 1331 8.263940 TCCTTTGTTAATTCGAGGACATAAAG 57.736 34.615 0.00 0.00 31.82 1.85
1260 1332 6.967199 CCTTTGTTAATTCGAGGACATAAAGC 59.033 38.462 0.00 0.00 0.00 3.51
1261 1333 6.431198 TTGTTAATTCGAGGACATAAAGCC 57.569 37.500 0.00 0.00 0.00 4.35
1262 1334 4.569162 TGTTAATTCGAGGACATAAAGCCG 59.431 41.667 0.00 0.00 0.00 5.52
1263 1335 2.240493 ATTCGAGGACATAAAGCCGG 57.760 50.000 0.00 0.00 0.00 6.13
1264 1336 0.461339 TTCGAGGACATAAAGCCGGC 60.461 55.000 21.89 21.89 0.00 6.13
1265 1337 1.887707 CGAGGACATAAAGCCGGCC 60.888 63.158 26.15 5.24 0.00 6.13
1266 1338 1.223487 GAGGACATAAAGCCGGCCA 59.777 57.895 26.15 9.51 0.00 5.36
1267 1339 0.179018 GAGGACATAAAGCCGGCCAT 60.179 55.000 26.15 15.51 0.00 4.40
1268 1340 0.179018 AGGACATAAAGCCGGCCATC 60.179 55.000 26.15 11.61 0.00 3.51
1269 1341 1.507141 GGACATAAAGCCGGCCATCG 61.507 60.000 26.15 11.09 38.88 3.84
1270 1342 0.531974 GACATAAAGCCGGCCATCGA 60.532 55.000 26.15 4.44 42.43 3.59
1271 1343 0.532862 ACATAAAGCCGGCCATCGAG 60.533 55.000 26.15 11.96 42.43 4.04
1272 1344 1.598130 ATAAAGCCGGCCATCGAGC 60.598 57.895 26.15 0.00 42.43 5.03
1273 1345 2.044806 ATAAAGCCGGCCATCGAGCT 62.045 55.000 26.15 0.00 43.54 4.09
1274 1346 4.101448 AAGCCGGCCATCGAGCTT 62.101 61.111 26.15 4.89 44.41 3.74
1275 1347 4.537433 AGCCGGCCATCGAGCTTC 62.537 66.667 26.15 0.00 40.60 3.86
1277 1349 3.854669 CCGGCCATCGAGCTTCCT 61.855 66.667 2.24 0.00 42.43 3.36
1278 1350 2.587194 CGGCCATCGAGCTTCCTG 60.587 66.667 2.24 0.00 42.43 3.86
1279 1351 2.903357 GGCCATCGAGCTTCCTGA 59.097 61.111 0.00 0.00 0.00 3.86
1280 1352 1.449353 GGCCATCGAGCTTCCTGAT 59.551 57.895 0.00 0.00 0.00 2.90
1281 1353 0.179034 GGCCATCGAGCTTCCTGATT 60.179 55.000 0.00 0.00 0.00 2.57
1282 1354 1.673168 GCCATCGAGCTTCCTGATTT 58.327 50.000 0.00 0.00 0.00 2.17
1283 1355 2.019984 GCCATCGAGCTTCCTGATTTT 58.980 47.619 0.00 0.00 0.00 1.82
1284 1356 2.032675 GCCATCGAGCTTCCTGATTTTC 59.967 50.000 0.00 0.00 0.00 2.29
1285 1357 2.615912 CCATCGAGCTTCCTGATTTTCC 59.384 50.000 0.00 0.00 0.00 3.13
1308 1380 2.819608 TCCATGGTTGCTAAGCTTTGAC 59.180 45.455 12.58 1.86 0.00 3.18
1459 1531 1.906574 TCCATCGGAAGCAGGTAAACT 59.093 47.619 0.00 0.00 0.00 2.66
1535 1607 2.164219 CGGATTTGTTTGTAGCTGCCAT 59.836 45.455 0.00 0.00 0.00 4.40
1609 1689 0.104855 GCAGGTGGTCTATCATCGCA 59.895 55.000 0.00 0.00 0.00 5.10
1807 1890 1.577922 CGCATCATACATGCAGCCC 59.422 57.895 7.32 0.00 44.75 5.19
1885 1968 2.423898 CGCCATGTACTCCCCGTCT 61.424 63.158 0.00 0.00 0.00 4.18
1894 1977 4.316823 TCCCCGTCTCACCAGGCT 62.317 66.667 0.00 0.00 0.00 4.58
2245 2328 5.067674 CCTGACATGAGAAACAAAACCAAGA 59.932 40.000 0.00 0.00 0.00 3.02
2278 2365 0.317603 GCATCCATGCGCAAGATGTC 60.318 55.000 35.06 27.77 44.67 3.06
2296 2387 0.668535 TCCATGCCTAGTCGTCGATG 59.331 55.000 0.00 0.00 0.00 3.84
2299 2390 1.109920 ATGCCTAGTCGTCGATGGCT 61.110 55.000 25.84 17.19 43.57 4.75
2314 2405 2.694760 GGCTGTAGTTGCTGGCTGC 61.695 63.158 9.67 9.67 43.25 5.25
2395 2486 5.801531 TGTACATTATCTTATCCGCCACT 57.198 39.130 0.00 0.00 0.00 4.00
2396 2487 5.779922 TGTACATTATCTTATCCGCCACTC 58.220 41.667 0.00 0.00 0.00 3.51
2397 2488 4.273148 ACATTATCTTATCCGCCACTCC 57.727 45.455 0.00 0.00 0.00 3.85
2398 2489 3.646162 ACATTATCTTATCCGCCACTCCA 59.354 43.478 0.00 0.00 0.00 3.86
2399 2490 3.746045 TTATCTTATCCGCCACTCCAC 57.254 47.619 0.00 0.00 0.00 4.02
2508 2842 2.656646 CAGTCCGGCTACTGTGCA 59.343 61.111 13.81 0.00 41.63 4.57
2559 2893 2.618816 GGACATGGCTCTGTCAAATCCA 60.619 50.000 18.14 0.00 45.95 3.41
2623 2957 2.501610 CCCAAGTCCGCCTCTAGC 59.498 66.667 0.00 0.00 38.52 3.42
2648 2982 0.098200 TAGCCAATCACTCGTCGACG 59.902 55.000 31.30 31.30 41.45 5.12
2655 2989 4.096311 CAATCACTCGTCGACGTAAAGAT 58.904 43.478 34.40 27.11 40.80 2.40
2657 2991 2.998670 TCACTCGTCGACGTAAAGATCT 59.001 45.455 34.40 9.10 40.80 2.75
2677 3011 6.821665 AGATCTTGTAGTGAGAGAGACTGTAC 59.178 42.308 0.00 0.00 0.00 2.90
2678 3012 6.116711 TCTTGTAGTGAGAGAGACTGTACT 57.883 41.667 0.00 0.00 0.00 2.73
2679 3013 7.242322 TCTTGTAGTGAGAGAGACTGTACTA 57.758 40.000 0.00 0.00 0.00 1.82
2707 3066 9.809096 ATCACACACACTGAGAATAAATACTAG 57.191 33.333 0.00 0.00 0.00 2.57
2708 3067 8.803235 TCACACACACTGAGAATAAATACTAGT 58.197 33.333 0.00 0.00 0.00 2.57
2711 3070 9.222916 CACACACTGAGAATAAATACTAGTACG 57.777 37.037 4.31 0.00 0.00 3.67
2713 3072 9.435802 CACACTGAGAATAAATACTAGTACGAC 57.564 37.037 4.31 0.00 0.00 4.34
2714 3073 9.170734 ACACTGAGAATAAATACTAGTACGACA 57.829 33.333 4.31 0.00 0.00 4.35
2718 3077 9.570468 TGAGAATAAATACTAGTACGACATCCT 57.430 33.333 4.31 0.00 0.00 3.24
2729 3088 8.997323 ACTAGTACGACATCCTATGTAATGTAC 58.003 37.037 15.11 15.11 45.03 2.90
2731 3090 5.762825 ACGACATCCTATGTAATGTACGT 57.237 39.130 0.00 0.00 45.03 3.57
2732 3091 6.866010 ACGACATCCTATGTAATGTACGTA 57.134 37.500 0.00 0.00 45.03 3.57
2734 3093 5.787062 CGACATCCTATGTAATGTACGTACG 59.213 44.000 20.18 15.01 45.03 3.67
2755 3123 5.617609 ACGTATGTGTTTGATCAATTCGTG 58.382 37.500 9.40 0.00 0.00 4.35
2761 3129 4.068599 TGTTTGATCAATTCGTGTGGCTA 58.931 39.130 9.40 0.00 0.00 3.93
2762 3130 4.083537 TGTTTGATCAATTCGTGTGGCTAC 60.084 41.667 9.40 0.33 0.00 3.58
2763 3131 3.610040 TGATCAATTCGTGTGGCTACT 57.390 42.857 0.64 0.00 0.00 2.57
2764 3132 4.729227 TGATCAATTCGTGTGGCTACTA 57.271 40.909 0.64 0.00 0.00 1.82
2779 3147 3.060602 GCTACTATTGCTTGGTCCGATC 58.939 50.000 0.00 0.00 0.00 3.69
2781 3149 1.480954 ACTATTGCTTGGTCCGATCGT 59.519 47.619 15.09 0.00 0.00 3.73
2786 3154 0.872021 GCTTGGTCCGATCGTGCTAG 60.872 60.000 15.09 5.83 0.00 3.42
2915 3291 1.876714 GTACGTGTGCGCGATGGAT 60.877 57.895 12.10 0.00 42.83 3.41
2916 3292 1.876263 TACGTGTGCGCGATGGATG 60.876 57.895 12.10 0.00 42.83 3.51
2917 3293 3.928769 CGTGTGCGCGATGGATGG 61.929 66.667 12.10 0.00 0.00 3.51
2918 3294 2.511373 GTGTGCGCGATGGATGGA 60.511 61.111 12.10 0.00 0.00 3.41
2919 3295 2.511373 TGTGCGCGATGGATGGAC 60.511 61.111 12.10 0.00 0.00 4.02
2920 3296 3.272334 GTGCGCGATGGATGGACC 61.272 66.667 12.10 0.00 39.54 4.46
3011 3388 1.217882 GCCGTTAACCGATCATGGAG 58.782 55.000 0.00 0.00 39.56 3.86
3012 3389 1.217882 CCGTTAACCGATCATGGAGC 58.782 55.000 0.00 0.00 39.56 4.70
3013 3390 0.852777 CGTTAACCGATCATGGAGCG 59.147 55.000 0.00 0.00 41.31 5.03
3014 3391 1.535226 CGTTAACCGATCATGGAGCGA 60.535 52.381 5.36 0.00 44.55 4.93
3016 3393 0.032130 TAACCGATCATGGAGCGAGC 59.968 55.000 5.36 0.00 44.55 5.03
3048 3429 0.622665 AAGATGCACCCAGCTAGCTT 59.377 50.000 16.46 0.00 45.94 3.74
3049 3430 1.500474 AGATGCACCCAGCTAGCTTA 58.500 50.000 16.46 0.00 45.94 3.09
3079 3538 2.476051 CGTGTGGATGCAAGCGAC 59.524 61.111 5.92 0.00 0.00 5.19
3080 3539 2.029288 CGTGTGGATGCAAGCGACT 61.029 57.895 5.92 0.00 0.00 4.18
3081 3540 1.790387 GTGTGGATGCAAGCGACTC 59.210 57.895 0.00 0.00 0.00 3.36
3083 3542 0.036105 TGTGGATGCAAGCGACTCAT 60.036 50.000 0.00 0.00 0.00 2.90
3084 3543 1.089920 GTGGATGCAAGCGACTCATT 58.910 50.000 0.00 0.00 0.00 2.57
3085 3544 1.063174 GTGGATGCAAGCGACTCATTC 59.937 52.381 0.00 0.00 0.00 2.67
3086 3545 0.659957 GGATGCAAGCGACTCATTCC 59.340 55.000 0.00 0.00 0.00 3.01
3087 3546 0.659957 GATGCAAGCGACTCATTCCC 59.340 55.000 0.00 0.00 0.00 3.97
3088 3547 0.035152 ATGCAAGCGACTCATTCCCA 60.035 50.000 0.00 0.00 0.00 4.37
3089 3548 0.674581 TGCAAGCGACTCATTCCCAG 60.675 55.000 0.00 0.00 0.00 4.45
3090 3549 0.674895 GCAAGCGACTCATTCCCAGT 60.675 55.000 0.00 0.00 0.00 4.00
3091 3550 1.363744 CAAGCGACTCATTCCCAGTC 58.636 55.000 0.00 0.00 37.51 3.51
3092 3551 0.250513 AAGCGACTCATTCCCAGTCC 59.749 55.000 0.00 0.00 37.58 3.85
3093 3552 1.153349 GCGACTCATTCCCAGTCCC 60.153 63.158 0.00 0.00 37.58 4.46
3094 3553 1.899437 GCGACTCATTCCCAGTCCCA 61.899 60.000 0.00 0.00 37.58 4.37
3147 3606 2.617308 CTCCATGTAGCAAGCCAATCAG 59.383 50.000 0.00 0.00 0.00 2.90
3167 3626 1.533756 GCACGCCACGCATTTGATTAT 60.534 47.619 0.00 0.00 0.00 1.28
3168 3627 2.110990 CACGCCACGCATTTGATTATG 58.889 47.619 0.00 0.00 0.00 1.90
3176 3635 2.349817 CGCATTTGATTATGCTCGACCC 60.350 50.000 6.97 0.00 46.81 4.46
3223 3684 7.325660 ACACATTTGATTGCTCGATCTTATT 57.674 32.000 0.00 0.00 0.00 1.40
3224 3685 8.437360 ACACATTTGATTGCTCGATCTTATTA 57.563 30.769 0.00 0.00 0.00 0.98
3225 3686 8.338259 ACACATTTGATTGCTCGATCTTATTAC 58.662 33.333 0.00 0.00 0.00 1.89
3226 3687 8.554528 CACATTTGATTGCTCGATCTTATTACT 58.445 33.333 0.00 0.00 0.00 2.24
3227 3688 8.768955 ACATTTGATTGCTCGATCTTATTACTC 58.231 33.333 0.00 0.00 0.00 2.59
3228 3689 8.986847 CATTTGATTGCTCGATCTTATTACTCT 58.013 33.333 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.030865 GTGTCTTTTTGTTTGTTACGTGGC 59.969 41.667 0.00 0.00 0.00 5.01
1 2 5.154932 TGTGTCTTTTTGTTTGTTACGTGG 58.845 37.500 0.00 0.00 0.00 4.94
2 3 6.677027 TTGTGTCTTTTTGTTTGTTACGTG 57.323 33.333 0.00 0.00 0.00 4.49
3 4 6.919115 AGTTTGTGTCTTTTTGTTTGTTACGT 59.081 30.769 0.00 0.00 0.00 3.57
4 5 7.328157 AGTTTGTGTCTTTTTGTTTGTTACG 57.672 32.000 0.00 0.00 0.00 3.18
5 6 9.182933 TGTAGTTTGTGTCTTTTTGTTTGTTAC 57.817 29.630 0.00 0.00 0.00 2.50
6 7 9.915629 ATGTAGTTTGTGTCTTTTTGTTTGTTA 57.084 25.926 0.00 0.00 0.00 2.41
7 8 8.825667 ATGTAGTTTGTGTCTTTTTGTTTGTT 57.174 26.923 0.00 0.00 0.00 2.83
8 9 9.567848 CTATGTAGTTTGTGTCTTTTTGTTTGT 57.432 29.630 0.00 0.00 0.00 2.83
9 10 9.019764 CCTATGTAGTTTGTGTCTTTTTGTTTG 57.980 33.333 0.00 0.00 0.00 2.93
10 11 8.745590 ACCTATGTAGTTTGTGTCTTTTTGTTT 58.254 29.630 0.00 0.00 0.00 2.83
11 12 8.288689 ACCTATGTAGTTTGTGTCTTTTTGTT 57.711 30.769 0.00 0.00 0.00 2.83
12 13 7.875327 ACCTATGTAGTTTGTGTCTTTTTGT 57.125 32.000 0.00 0.00 0.00 2.83
13 14 8.832521 TGTACCTATGTAGTTTGTGTCTTTTTG 58.167 33.333 0.00 0.00 0.00 2.44
14 15 8.967664 TGTACCTATGTAGTTTGTGTCTTTTT 57.032 30.769 0.00 0.00 0.00 1.94
15 16 8.833493 GTTGTACCTATGTAGTTTGTGTCTTTT 58.167 33.333 0.00 0.00 0.00 2.27
16 17 8.208903 AGTTGTACCTATGTAGTTTGTGTCTTT 58.791 33.333 0.00 0.00 0.00 2.52
17 18 7.732996 AGTTGTACCTATGTAGTTTGTGTCTT 58.267 34.615 0.00 0.00 0.00 3.01
18 19 7.299246 AGTTGTACCTATGTAGTTTGTGTCT 57.701 36.000 0.00 0.00 0.00 3.41
19 20 7.958053 AAGTTGTACCTATGTAGTTTGTGTC 57.042 36.000 0.00 0.00 0.00 3.67
20 21 8.741603 AAAAGTTGTACCTATGTAGTTTGTGT 57.258 30.769 0.00 0.00 0.00 3.72
37 38 9.921637 TGTGTTTCTCAAGAAAATAAAAGTTGT 57.078 25.926 6.76 0.00 44.58 3.32
39 40 9.921637 TGTGTGTTTCTCAAGAAAATAAAAGTT 57.078 25.926 6.76 0.00 44.58 2.66
40 41 9.353999 GTGTGTGTTTCTCAAGAAAATAAAAGT 57.646 29.630 6.76 0.00 44.58 2.66
41 42 8.523464 CGTGTGTGTTTCTCAAGAAAATAAAAG 58.477 33.333 6.76 0.00 44.58 2.27
42 43 8.237949 TCGTGTGTGTTTCTCAAGAAAATAAAA 58.762 29.630 6.76 0.00 44.58 1.52
43 44 7.753659 TCGTGTGTGTTTCTCAAGAAAATAAA 58.246 30.769 6.76 0.00 44.58 1.40
44 45 7.310072 TCGTGTGTGTTTCTCAAGAAAATAA 57.690 32.000 6.76 0.00 44.58 1.40
45 46 6.912203 TCGTGTGTGTTTCTCAAGAAAATA 57.088 33.333 6.76 0.00 44.58 1.40
46 47 5.811399 TCGTGTGTGTTTCTCAAGAAAAT 57.189 34.783 6.76 0.00 44.58 1.82
47 48 5.352846 TGATCGTGTGTGTTTCTCAAGAAAA 59.647 36.000 6.76 0.00 44.58 2.29
48 49 4.873259 TGATCGTGTGTGTTTCTCAAGAAA 59.127 37.500 1.06 1.06 41.29 2.52
49 50 4.270084 GTGATCGTGTGTGTTTCTCAAGAA 59.730 41.667 0.00 0.00 33.51 2.52
50 51 3.802139 GTGATCGTGTGTGTTTCTCAAGA 59.198 43.478 0.00 0.00 34.06 3.02
51 52 3.555547 TGTGATCGTGTGTGTTTCTCAAG 59.444 43.478 0.00 0.00 0.00 3.02
52 53 3.526534 TGTGATCGTGTGTGTTTCTCAA 58.473 40.909 0.00 0.00 0.00 3.02
53 54 3.172229 TGTGATCGTGTGTGTTTCTCA 57.828 42.857 0.00 0.00 0.00 3.27
54 55 4.034048 AGTTTGTGATCGTGTGTGTTTCTC 59.966 41.667 0.00 0.00 0.00 2.87
55 56 3.938963 AGTTTGTGATCGTGTGTGTTTCT 59.061 39.130 0.00 0.00 0.00 2.52
56 57 4.028383 CAGTTTGTGATCGTGTGTGTTTC 58.972 43.478 0.00 0.00 0.00 2.78
57 58 3.438781 ACAGTTTGTGATCGTGTGTGTTT 59.561 39.130 0.00 0.00 0.00 2.83
58 59 3.006940 ACAGTTTGTGATCGTGTGTGTT 58.993 40.909 0.00 0.00 0.00 3.32
59 60 2.627945 ACAGTTTGTGATCGTGTGTGT 58.372 42.857 0.00 0.00 0.00 3.72
71 72 3.980646 TTTGATTAGCGCACAGTTTGT 57.019 38.095 11.47 0.00 0.00 2.83
72 73 4.041049 TGTTTTGATTAGCGCACAGTTTG 58.959 39.130 11.47 0.00 0.00 2.93
73 74 4.300189 TGTTTTGATTAGCGCACAGTTT 57.700 36.364 11.47 0.00 0.00 2.66
74 75 3.980646 TGTTTTGATTAGCGCACAGTT 57.019 38.095 11.47 0.00 0.00 3.16
75 76 3.315191 AGTTGTTTTGATTAGCGCACAGT 59.685 39.130 11.47 0.00 0.00 3.55
76 77 3.888934 AGTTGTTTTGATTAGCGCACAG 58.111 40.909 11.47 0.00 0.00 3.66
77 78 3.980646 AGTTGTTTTGATTAGCGCACA 57.019 38.095 11.47 0.00 0.00 4.57
78 79 3.846335 GCTAGTTGTTTTGATTAGCGCAC 59.154 43.478 11.47 0.00 0.00 5.34
79 80 3.751175 AGCTAGTTGTTTTGATTAGCGCA 59.249 39.130 11.47 0.00 41.12 6.09
80 81 4.335272 GAGCTAGTTGTTTTGATTAGCGC 58.665 43.478 0.00 0.00 41.12 5.92
81 82 4.326278 TCGAGCTAGTTGTTTTGATTAGCG 59.674 41.667 0.00 0.00 41.12 4.26
82 83 5.779806 TCGAGCTAGTTGTTTTGATTAGC 57.220 39.130 0.00 0.00 37.57 3.09
83 84 6.673316 GCCTTCGAGCTAGTTGTTTTGATTAG 60.673 42.308 0.00 0.00 0.00 1.73
84 85 5.121768 GCCTTCGAGCTAGTTGTTTTGATTA 59.878 40.000 0.00 0.00 0.00 1.75
85 86 4.083271 GCCTTCGAGCTAGTTGTTTTGATT 60.083 41.667 0.00 0.00 0.00 2.57
86 87 3.437049 GCCTTCGAGCTAGTTGTTTTGAT 59.563 43.478 0.00 0.00 0.00 2.57
87 88 2.806244 GCCTTCGAGCTAGTTGTTTTGA 59.194 45.455 0.00 0.00 0.00 2.69
88 89 2.548057 TGCCTTCGAGCTAGTTGTTTTG 59.452 45.455 0.00 0.00 0.00 2.44
89 90 2.808543 CTGCCTTCGAGCTAGTTGTTTT 59.191 45.455 0.00 0.00 0.00 2.43
90 91 2.037251 TCTGCCTTCGAGCTAGTTGTTT 59.963 45.455 0.00 0.00 0.00 2.83
91 92 1.618837 TCTGCCTTCGAGCTAGTTGTT 59.381 47.619 0.00 0.00 0.00 2.83
92 93 1.067495 GTCTGCCTTCGAGCTAGTTGT 60.067 52.381 0.00 0.00 0.00 3.32
93 94 1.634702 GTCTGCCTTCGAGCTAGTTG 58.365 55.000 0.00 0.00 0.00 3.16
94 95 0.171455 CGTCTGCCTTCGAGCTAGTT 59.829 55.000 0.00 0.00 0.00 2.24
95 96 1.803943 CGTCTGCCTTCGAGCTAGT 59.196 57.895 0.00 0.00 0.00 2.57
96 97 1.587613 GCGTCTGCCTTCGAGCTAG 60.588 63.158 0.00 0.00 33.98 3.42
97 98 2.490217 GCGTCTGCCTTCGAGCTA 59.510 61.111 0.00 0.00 33.98 3.32
107 108 1.634702 TTGTTTGTTTTGGCGTCTGC 58.365 45.000 0.00 0.00 41.71 4.26
108 109 2.027451 CGTTTGTTTGTTTTGGCGTCTG 59.973 45.455 0.00 0.00 0.00 3.51
109 110 2.255316 CGTTTGTTTGTTTTGGCGTCT 58.745 42.857 0.00 0.00 0.00 4.18
110 111 1.266647 GCGTTTGTTTGTTTTGGCGTC 60.267 47.619 0.00 0.00 0.00 5.19
111 112 0.716666 GCGTTTGTTTGTTTTGGCGT 59.283 45.000 0.00 0.00 0.00 5.68
112 113 0.716108 TGCGTTTGTTTGTTTTGGCG 59.284 45.000 0.00 0.00 0.00 5.69
113 114 1.996191 TCTGCGTTTGTTTGTTTTGGC 59.004 42.857 0.00 0.00 0.00 4.52
114 115 2.602660 CCTCTGCGTTTGTTTGTTTTGG 59.397 45.455 0.00 0.00 0.00 3.28
115 116 2.029124 GCCTCTGCGTTTGTTTGTTTTG 59.971 45.455 0.00 0.00 0.00 2.44
116 117 2.267426 GCCTCTGCGTTTGTTTGTTTT 58.733 42.857 0.00 0.00 0.00 2.43
117 118 1.470805 GGCCTCTGCGTTTGTTTGTTT 60.471 47.619 0.00 0.00 38.85 2.83
118 119 0.102300 GGCCTCTGCGTTTGTTTGTT 59.898 50.000 0.00 0.00 38.85 2.83
119 120 1.034838 TGGCCTCTGCGTTTGTTTGT 61.035 50.000 3.32 0.00 38.85 2.83
120 121 0.102120 TTGGCCTCTGCGTTTGTTTG 59.898 50.000 3.32 0.00 38.85 2.93
121 122 0.102300 GTTGGCCTCTGCGTTTGTTT 59.898 50.000 3.32 0.00 38.85 2.83
122 123 1.733526 GTTGGCCTCTGCGTTTGTT 59.266 52.632 3.32 0.00 38.85 2.83
123 124 2.193536 GGTTGGCCTCTGCGTTTGT 61.194 57.895 3.32 0.00 38.85 2.83
124 125 2.644992 GGTTGGCCTCTGCGTTTG 59.355 61.111 3.32 0.00 38.85 2.93
125 126 2.978010 CGGTTGGCCTCTGCGTTT 60.978 61.111 3.32 0.00 38.85 3.60
136 137 4.368808 CAAGTCGCGTGCGGTTGG 62.369 66.667 14.89 0.00 40.25 3.77
137 138 3.334751 TCAAGTCGCGTGCGGTTG 61.335 61.111 14.89 16.93 40.25 3.77
138 139 3.335534 GTCAAGTCGCGTGCGGTT 61.336 61.111 14.89 5.71 40.25 4.44
139 140 4.578898 TGTCAAGTCGCGTGCGGT 62.579 61.111 14.89 0.00 40.25 5.68
140 141 3.334751 TTGTCAAGTCGCGTGCGG 61.335 61.111 14.89 0.00 40.25 5.69
141 142 2.128128 GTTGTCAAGTCGCGTGCG 60.128 61.111 5.77 8.14 41.35 5.34
142 143 2.248431 GGTTGTCAAGTCGCGTGC 59.752 61.111 5.77 0.00 0.00 5.34
143 144 2.544359 CGGTTGTCAAGTCGCGTG 59.456 61.111 5.77 0.00 0.00 5.34
144 145 2.660552 CCGGTTGTCAAGTCGCGT 60.661 61.111 5.77 0.00 0.00 6.01
145 146 4.072088 GCCGGTTGTCAAGTCGCG 62.072 66.667 1.90 0.00 0.00 5.87
146 147 3.723348 GGCCGGTTGTCAAGTCGC 61.723 66.667 1.90 0.00 0.00 5.19
147 148 3.047877 GGGCCGGTTGTCAAGTCG 61.048 66.667 1.90 0.00 0.00 4.18
148 149 1.104577 TTTGGGCCGGTTGTCAAGTC 61.105 55.000 1.90 0.00 0.00 3.01
149 150 0.684805 TTTTGGGCCGGTTGTCAAGT 60.685 50.000 1.90 0.00 0.00 3.16
150 151 0.461961 TTTTTGGGCCGGTTGTCAAG 59.538 50.000 1.90 0.00 0.00 3.02
151 152 2.591915 TTTTTGGGCCGGTTGTCAA 58.408 47.368 1.90 0.00 0.00 3.18
152 153 4.356979 TTTTTGGGCCGGTTGTCA 57.643 50.000 1.90 0.00 0.00 3.58
167 168 0.105964 GCGGGCCCTTCTTTGTTTTT 59.894 50.000 22.43 0.00 0.00 1.94
168 169 1.745890 GCGGGCCCTTCTTTGTTTT 59.254 52.632 22.43 0.00 0.00 2.43
169 170 2.207229 GGCGGGCCCTTCTTTGTTT 61.207 57.895 22.43 0.00 0.00 2.83
170 171 2.600470 GGCGGGCCCTTCTTTGTT 60.600 61.111 22.43 0.00 0.00 2.83
185 186 4.237207 GTAGGGCTACAGCGGGGC 62.237 72.222 0.00 0.00 43.26 5.80
186 187 2.762459 TGTAGGGCTACAGCGGGG 60.762 66.667 0.00 0.00 40.77 5.73
196 197 0.107945 CTCAAGTCAGGCTGTAGGGC 60.108 60.000 15.27 1.43 41.20 5.19
197 198 1.561643 TCTCAAGTCAGGCTGTAGGG 58.438 55.000 15.27 3.23 0.00 3.53
198 199 2.672478 CGTTCTCAAGTCAGGCTGTAGG 60.672 54.545 15.27 3.28 0.00 3.18
199 200 2.600731 CGTTCTCAAGTCAGGCTGTAG 58.399 52.381 15.27 5.91 0.00 2.74
200 201 1.336887 GCGTTCTCAAGTCAGGCTGTA 60.337 52.381 15.27 0.00 0.00 2.74
201 202 0.601311 GCGTTCTCAAGTCAGGCTGT 60.601 55.000 15.27 0.00 0.00 4.40
202 203 1.621301 CGCGTTCTCAAGTCAGGCTG 61.621 60.000 8.58 8.58 0.00 4.85
203 204 1.373497 CGCGTTCTCAAGTCAGGCT 60.373 57.895 0.00 0.00 0.00 4.58
204 205 0.944311 TTCGCGTTCTCAAGTCAGGC 60.944 55.000 5.77 0.00 0.00 4.85
205 206 0.784778 GTTCGCGTTCTCAAGTCAGG 59.215 55.000 5.77 0.00 0.00 3.86
206 207 0.431233 CGTTCGCGTTCTCAAGTCAG 59.569 55.000 5.77 0.00 35.57 3.51
207 208 0.029700 TCGTTCGCGTTCTCAAGTCA 59.970 50.000 5.77 0.00 42.11 3.41
208 209 1.057847 CATCGTTCGCGTTCTCAAGTC 59.942 52.381 5.77 0.00 42.11 3.01
209 210 1.060713 CATCGTTCGCGTTCTCAAGT 58.939 50.000 5.77 0.00 42.11 3.16
210 211 0.366871 CCATCGTTCGCGTTCTCAAG 59.633 55.000 5.77 0.00 42.11 3.02
211 212 0.319211 ACCATCGTTCGCGTTCTCAA 60.319 50.000 5.77 0.00 42.11 3.02
212 213 0.522626 TACCATCGTTCGCGTTCTCA 59.477 50.000 5.77 0.00 42.11 3.27
213 214 1.582502 CTTACCATCGTTCGCGTTCTC 59.417 52.381 5.77 0.00 42.11 2.87
214 215 1.200716 TCTTACCATCGTTCGCGTTCT 59.799 47.619 5.77 0.00 42.11 3.01
215 216 1.319669 GTCTTACCATCGTTCGCGTTC 59.680 52.381 5.77 0.00 42.11 3.95
216 217 1.343506 GTCTTACCATCGTTCGCGTT 58.656 50.000 5.77 0.00 42.11 4.84
217 218 0.795735 CGTCTTACCATCGTTCGCGT 60.796 55.000 5.77 0.00 42.11 6.01
218 219 0.521867 TCGTCTTACCATCGTTCGCG 60.522 55.000 0.00 0.00 42.98 5.87
219 220 1.189403 CTCGTCTTACCATCGTTCGC 58.811 55.000 0.00 0.00 0.00 4.70
220 221 1.533338 CCCTCGTCTTACCATCGTTCG 60.533 57.143 0.00 0.00 0.00 3.95
221 222 1.801765 GCCCTCGTCTTACCATCGTTC 60.802 57.143 0.00 0.00 0.00 3.95
222 223 0.175073 GCCCTCGTCTTACCATCGTT 59.825 55.000 0.00 0.00 0.00 3.85
223 224 0.968901 TGCCCTCGTCTTACCATCGT 60.969 55.000 0.00 0.00 0.00 3.73
224 225 0.249073 CTGCCCTCGTCTTACCATCG 60.249 60.000 0.00 0.00 0.00 3.84
225 226 1.112113 TCTGCCCTCGTCTTACCATC 58.888 55.000 0.00 0.00 0.00 3.51
226 227 1.689273 GATCTGCCCTCGTCTTACCAT 59.311 52.381 0.00 0.00 0.00 3.55
227 228 1.112113 GATCTGCCCTCGTCTTACCA 58.888 55.000 0.00 0.00 0.00 3.25
228 229 0.030908 CGATCTGCCCTCGTCTTACC 59.969 60.000 0.00 0.00 0.00 2.85
229 230 0.595310 GCGATCTGCCCTCGTCTTAC 60.595 60.000 0.00 0.00 38.37 2.34
230 231 1.734137 GCGATCTGCCCTCGTCTTA 59.266 57.895 0.00 0.00 38.37 2.10
231 232 2.496817 GCGATCTGCCCTCGTCTT 59.503 61.111 0.00 0.00 38.37 3.01
232 233 3.893763 CGCGATCTGCCCTCGTCT 61.894 66.667 0.00 0.00 42.08 4.18
233 234 3.815569 CTCGCGATCTGCCCTCGTC 62.816 68.421 10.36 0.00 42.08 4.20
234 235 3.893763 CTCGCGATCTGCCCTCGT 61.894 66.667 10.36 0.00 42.08 4.18
235 236 3.893763 ACTCGCGATCTGCCCTCG 61.894 66.667 10.36 0.00 42.08 4.63
236 237 2.279120 CACTCGCGATCTGCCCTC 60.279 66.667 10.36 0.00 42.08 4.30
237 238 4.521062 GCACTCGCGATCTGCCCT 62.521 66.667 22.25 0.00 42.08 5.19
248 249 2.166007 CCTTTAATTTTCGCGCACTCG 58.834 47.619 8.75 0.00 39.07 4.18
249 250 1.911464 GCCTTTAATTTTCGCGCACTC 59.089 47.619 8.75 0.00 0.00 3.51
250 251 1.268352 TGCCTTTAATTTTCGCGCACT 59.732 42.857 8.75 0.00 0.00 4.40
251 252 1.648681 CTGCCTTTAATTTTCGCGCAC 59.351 47.619 8.75 0.00 0.00 5.34
252 253 1.537638 TCTGCCTTTAATTTTCGCGCA 59.462 42.857 8.75 0.00 0.00 6.09
253 254 1.911464 GTCTGCCTTTAATTTTCGCGC 59.089 47.619 0.00 0.00 0.00 6.86
254 255 3.120338 TCTGTCTGCCTTTAATTTTCGCG 60.120 43.478 0.00 0.00 0.00 5.87
255 256 4.419522 TCTGTCTGCCTTTAATTTTCGC 57.580 40.909 0.00 0.00 0.00 4.70
256 257 5.258622 CGATCTGTCTGCCTTTAATTTTCG 58.741 41.667 0.00 0.00 0.00 3.46
257 258 5.354234 TCCGATCTGTCTGCCTTTAATTTTC 59.646 40.000 0.00 0.00 0.00 2.29
258 259 5.123979 GTCCGATCTGTCTGCCTTTAATTTT 59.876 40.000 0.00 0.00 0.00 1.82
259 260 4.636206 GTCCGATCTGTCTGCCTTTAATTT 59.364 41.667 0.00 0.00 0.00 1.82
260 261 4.192317 GTCCGATCTGTCTGCCTTTAATT 58.808 43.478 0.00 0.00 0.00 1.40
261 262 3.738281 CGTCCGATCTGTCTGCCTTTAAT 60.738 47.826 0.00 0.00 0.00 1.40
262 263 2.416836 CGTCCGATCTGTCTGCCTTTAA 60.417 50.000 0.00 0.00 0.00 1.52
263 264 1.134367 CGTCCGATCTGTCTGCCTTTA 59.866 52.381 0.00 0.00 0.00 1.85
264 265 0.108615 CGTCCGATCTGTCTGCCTTT 60.109 55.000 0.00 0.00 0.00 3.11
265 266 1.513158 CGTCCGATCTGTCTGCCTT 59.487 57.895 0.00 0.00 0.00 4.35
266 267 2.418910 CCGTCCGATCTGTCTGCCT 61.419 63.158 0.00 0.00 0.00 4.75
267 268 2.105128 CCGTCCGATCTGTCTGCC 59.895 66.667 0.00 0.00 0.00 4.85
268 269 2.583593 GCCGTCCGATCTGTCTGC 60.584 66.667 0.00 0.00 0.00 4.26
269 270 1.226802 CAGCCGTCCGATCTGTCTG 60.227 63.158 0.00 0.00 0.00 3.51
270 271 2.418910 CCAGCCGTCCGATCTGTCT 61.419 63.158 0.00 0.00 0.00 3.41
271 272 2.105128 CCAGCCGTCCGATCTGTC 59.895 66.667 0.00 0.00 0.00 3.51
272 273 2.362503 TCCAGCCGTCCGATCTGT 60.363 61.111 0.00 0.00 0.00 3.41
273 274 2.021068 ATGTCCAGCCGTCCGATCTG 62.021 60.000 0.00 0.00 0.00 2.90
274 275 1.330655 AATGTCCAGCCGTCCGATCT 61.331 55.000 0.00 0.00 0.00 2.75
275 276 0.462047 AAATGTCCAGCCGTCCGATC 60.462 55.000 0.00 0.00 0.00 3.69
276 277 0.828022 TAAATGTCCAGCCGTCCGAT 59.172 50.000 0.00 0.00 0.00 4.18
277 278 0.174845 CTAAATGTCCAGCCGTCCGA 59.825 55.000 0.00 0.00 0.00 4.55
278 279 0.174845 TCTAAATGTCCAGCCGTCCG 59.825 55.000 0.00 0.00 0.00 4.79
279 280 2.213499 CATCTAAATGTCCAGCCGTCC 58.787 52.381 0.00 0.00 0.00 4.79
280 281 2.609459 CACATCTAAATGTCCAGCCGTC 59.391 50.000 0.00 0.00 44.41 4.79
281 282 2.236146 TCACATCTAAATGTCCAGCCGT 59.764 45.455 0.00 0.00 44.41 5.68
282 283 2.868583 CTCACATCTAAATGTCCAGCCG 59.131 50.000 0.00 0.00 44.41 5.52
283 284 4.142609 TCTCACATCTAAATGTCCAGCC 57.857 45.455 0.00 0.00 44.41 4.85
284 285 6.989169 AGTTATCTCACATCTAAATGTCCAGC 59.011 38.462 0.00 0.00 44.41 4.85
316 317 9.269453 TCAGATTTGCTATTTCACATCTAGATG 57.731 33.333 27.63 27.63 44.15 2.90
318 319 9.842775 AATCAGATTTGCTATTTCACATCTAGA 57.157 29.630 0.00 0.00 33.22 2.43
329 330 9.578439 GTGCTTAGAAAAATCAGATTTGCTATT 57.422 29.630 9.24 0.00 31.77 1.73
330 331 8.742777 TGTGCTTAGAAAAATCAGATTTGCTAT 58.257 29.630 9.24 0.64 31.77 2.97
331 332 8.109705 TGTGCTTAGAAAAATCAGATTTGCTA 57.890 30.769 9.24 10.84 31.77 3.49
332 333 6.985117 TGTGCTTAGAAAAATCAGATTTGCT 58.015 32.000 9.24 11.72 31.77 3.91
333 334 7.758528 AGATGTGCTTAGAAAAATCAGATTTGC 59.241 33.333 9.24 7.74 31.77 3.68
334 335 9.286946 GAGATGTGCTTAGAAAAATCAGATTTG 57.713 33.333 9.24 0.00 31.77 2.32
335 336 8.465201 GGAGATGTGCTTAGAAAAATCAGATTT 58.535 33.333 2.20 2.20 0.00 2.17
336 337 7.833183 AGGAGATGTGCTTAGAAAAATCAGATT 59.167 33.333 0.00 0.00 0.00 2.40
337 338 7.344913 AGGAGATGTGCTTAGAAAAATCAGAT 58.655 34.615 0.00 0.00 0.00 2.90
338 339 6.715280 AGGAGATGTGCTTAGAAAAATCAGA 58.285 36.000 0.00 0.00 0.00 3.27
339 340 6.038050 GGAGGAGATGTGCTTAGAAAAATCAG 59.962 42.308 0.00 0.00 0.00 2.90
340 341 5.882557 GGAGGAGATGTGCTTAGAAAAATCA 59.117 40.000 0.00 0.00 0.00 2.57
389 400 2.632541 GCGAGACGGACGATCGAT 59.367 61.111 24.34 5.96 38.72 3.59
397 408 2.619165 TACTTGTGCGCGAGACGGA 61.619 57.895 21.46 0.72 43.93 4.69
398 409 2.126618 TACTTGTGCGCGAGACGG 60.127 61.111 21.46 5.18 43.93 4.79
420 431 6.844388 AGTGGTCATACTATAATGAACCTCCA 59.156 38.462 0.95 0.00 41.96 3.86
426 437 5.368230 TGGGCAGTGGTCATACTATAATGAA 59.632 40.000 0.00 0.00 37.61 2.57
427 438 4.904853 TGGGCAGTGGTCATACTATAATGA 59.095 41.667 0.00 0.00 33.48 2.57
428 439 4.997395 GTGGGCAGTGGTCATACTATAATG 59.003 45.833 0.00 0.00 0.00 1.90
438 455 2.828868 GTCAGTGGGCAGTGGTCA 59.171 61.111 0.00 0.00 32.72 4.02
439 456 2.357517 CGTCAGTGGGCAGTGGTC 60.358 66.667 0.00 0.00 32.72 4.02
440 457 4.626081 GCGTCAGTGGGCAGTGGT 62.626 66.667 0.00 0.00 32.72 4.16
557 578 1.683025 TATTGTCCCGCTCCGTGGA 60.683 57.895 0.00 0.00 34.74 4.02
575 596 1.224039 CTCTCCCCTCGACCGTAGT 59.776 63.158 0.00 0.00 0.00 2.73
687 708 0.654160 GCGTTTTATACTGGGCGTCC 59.346 55.000 0.00 0.00 0.00 4.79
711 735 3.267177 TAGGCTTGCAGGGGAGGGA 62.267 63.158 0.00 0.00 0.00 4.20
718 742 4.865865 GGCTAGTAGGCTTGCAGG 57.134 61.111 16.18 0.00 43.54 4.85
739 763 0.172803 CAGATGGAAGGCAGCAAAGC 59.827 55.000 0.00 0.00 0.00 3.51
743 767 1.378119 CAGCAGATGGAAGGCAGCA 60.378 57.895 0.00 0.00 0.00 4.41
767 791 4.688419 CGCGGTGTTGCAGGCTTG 62.688 66.667 0.00 0.00 34.15 4.01
768 792 4.927782 TCGCGGTGTTGCAGGCTT 62.928 61.111 6.13 0.00 34.15 4.35
771 795 3.414700 GACTCGCGGTGTTGCAGG 61.415 66.667 6.13 0.00 34.15 4.85
811 838 4.643387 GGCGAGCTGGGTGTTGGT 62.643 66.667 0.00 0.00 0.00 3.67
831 860 0.539438 ATCAAAGTTTCCTGGGCGCA 60.539 50.000 10.83 2.47 0.00 6.09
832 861 0.171231 GATCAAAGTTTCCTGGGCGC 59.829 55.000 0.00 0.00 0.00 6.53
833 862 0.447801 CGATCAAAGTTTCCTGGGCG 59.552 55.000 0.00 0.00 0.00 6.13
834 863 1.821216 TCGATCAAAGTTTCCTGGGC 58.179 50.000 0.00 0.00 0.00 5.36
835 864 2.945668 GGATCGATCAAAGTTTCCTGGG 59.054 50.000 25.93 0.00 0.00 4.45
836 865 3.609853 TGGATCGATCAAAGTTTCCTGG 58.390 45.455 25.93 0.00 0.00 4.45
843 876 4.560128 CGTATGGATGGATCGATCAAAGT 58.440 43.478 25.93 9.01 0.00 2.66
844 877 3.369147 GCGTATGGATGGATCGATCAAAG 59.631 47.826 25.93 8.03 0.00 2.77
852 885 0.687354 ACAGGGCGTATGGATGGATC 59.313 55.000 0.00 0.00 0.00 3.36
855 888 1.300931 CGACAGGGCGTATGGATGG 60.301 63.158 0.00 0.00 0.00 3.51
880 916 4.749310 CCTCTCGTTGCTGCCGCT 62.749 66.667 0.70 0.00 36.97 5.52
913 949 3.454587 AACACGAGCCTGCCGTTGA 62.455 57.895 0.00 0.00 38.29 3.18
920 956 1.487231 CGAAACGAACACGAGCCTG 59.513 57.895 0.00 0.00 0.00 4.85
921 957 2.308039 GCGAAACGAACACGAGCCT 61.308 57.895 0.00 0.00 0.00 4.58
922 958 2.170273 GCGAAACGAACACGAGCC 59.830 61.111 0.00 0.00 0.00 4.70
924 960 2.464189 CGGCGAAACGAACACGAG 59.536 61.111 0.00 0.00 35.47 4.18
925 961 2.752322 ATCCGGCGAAACGAACACGA 62.752 55.000 9.30 0.00 35.47 4.35
927 963 0.236449 AAATCCGGCGAAACGAACAC 59.764 50.000 9.30 0.00 35.47 3.32
928 964 0.513820 GAAATCCGGCGAAACGAACA 59.486 50.000 9.30 0.00 35.47 3.18
929 965 0.517742 CGAAATCCGGCGAAACGAAC 60.518 55.000 9.30 0.00 35.47 3.95
930 966 1.782807 CGAAATCCGGCGAAACGAA 59.217 52.632 9.30 0.00 35.47 3.85
972 1009 1.613255 GCTCCCTCTCGCTCTAGCTAT 60.613 57.143 0.00 0.00 39.32 2.97
974 1011 1.528309 GCTCCCTCTCGCTCTAGCT 60.528 63.158 0.00 0.00 39.32 3.32
976 1013 1.795170 GCTGCTCCCTCTCGCTCTAG 61.795 65.000 0.00 0.00 0.00 2.43
1105 1142 2.510238 GAGCGCGATCCAGTTGCT 60.510 61.111 14.62 0.00 38.89 3.91
1144 1185 2.444624 CGATTACTGCAGCACGCGT 61.445 57.895 15.27 5.58 46.97 6.01
1175 1231 4.845580 CACCGGCAGGCTAGGCTG 62.846 72.222 35.39 35.39 42.76 4.85
1231 1303 2.997986 TCCTCGAATTAACAAAGGACGC 59.002 45.455 0.00 0.00 31.25 5.19
1240 1312 4.025145 CCGGCTTTATGTCCTCGAATTAAC 60.025 45.833 0.00 0.00 0.00 2.01
1241 1313 4.124238 CCGGCTTTATGTCCTCGAATTAA 58.876 43.478 0.00 0.00 0.00 1.40
1244 1316 1.810412 GCCGGCTTTATGTCCTCGAAT 60.810 52.381 22.15 0.00 0.00 3.34
1253 1325 1.845809 GCTCGATGGCCGGCTTTATG 61.846 60.000 28.56 12.96 39.14 1.90
1254 1326 1.598130 GCTCGATGGCCGGCTTTAT 60.598 57.895 28.56 18.25 39.14 1.40
1256 1328 3.628646 AAGCTCGATGGCCGGCTTT 62.629 57.895 28.56 14.45 45.56 3.51
1257 1329 4.101448 AAGCTCGATGGCCGGCTT 62.101 61.111 28.56 14.87 44.19 4.35
1258 1330 4.537433 GAAGCTCGATGGCCGGCT 62.537 66.667 28.56 7.30 43.26 5.52
1260 1332 3.854669 AGGAAGCTCGATGGCCGG 61.855 66.667 0.00 0.00 39.14 6.13
1261 1333 2.374830 ATCAGGAAGCTCGATGGCCG 62.375 60.000 0.00 0.00 40.25 6.13
1262 1334 0.179034 AATCAGGAAGCTCGATGGCC 60.179 55.000 0.00 0.00 0.00 5.36
1263 1335 1.673168 AAATCAGGAAGCTCGATGGC 58.327 50.000 0.00 0.00 0.00 4.40
1264 1336 2.615912 GGAAAATCAGGAAGCTCGATGG 59.384 50.000 0.00 0.00 0.00 3.51
1265 1337 3.539604 AGGAAAATCAGGAAGCTCGATG 58.460 45.455 0.00 0.00 0.00 3.84
1266 1338 3.922171 AGGAAAATCAGGAAGCTCGAT 57.078 42.857 0.00 0.00 0.00 3.59
1267 1339 3.600388 GAAGGAAAATCAGGAAGCTCGA 58.400 45.455 0.00 0.00 0.00 4.04
1268 1340 2.680339 GGAAGGAAAATCAGGAAGCTCG 59.320 50.000 0.00 0.00 0.00 5.03
1269 1341 3.690460 TGGAAGGAAAATCAGGAAGCTC 58.310 45.455 0.00 0.00 0.00 4.09
1270 1342 3.814504 TGGAAGGAAAATCAGGAAGCT 57.185 42.857 0.00 0.00 0.00 3.74
1271 1343 3.131755 CCATGGAAGGAAAATCAGGAAGC 59.868 47.826 5.56 0.00 0.00 3.86
1272 1344 4.347607 ACCATGGAAGGAAAATCAGGAAG 58.652 43.478 21.47 0.00 0.00 3.46
1273 1345 4.402616 ACCATGGAAGGAAAATCAGGAA 57.597 40.909 21.47 0.00 0.00 3.36
1274 1346 4.088634 CAACCATGGAAGGAAAATCAGGA 58.911 43.478 21.47 0.00 0.00 3.86
1275 1347 3.368739 GCAACCATGGAAGGAAAATCAGG 60.369 47.826 21.47 0.00 0.00 3.86
1276 1348 3.512724 AGCAACCATGGAAGGAAAATCAG 59.487 43.478 21.47 0.00 0.00 2.90
1277 1349 3.509442 AGCAACCATGGAAGGAAAATCA 58.491 40.909 21.47 0.00 0.00 2.57
1278 1350 5.654497 CTTAGCAACCATGGAAGGAAAATC 58.346 41.667 21.47 0.00 0.00 2.17
1279 1351 4.081476 GCTTAGCAACCATGGAAGGAAAAT 60.081 41.667 21.47 0.00 0.00 1.82
1280 1352 3.258123 GCTTAGCAACCATGGAAGGAAAA 59.742 43.478 21.47 4.48 0.00 2.29
1281 1353 2.825532 GCTTAGCAACCATGGAAGGAAA 59.174 45.455 21.47 6.10 0.00 3.13
1282 1354 2.041620 AGCTTAGCAACCATGGAAGGAA 59.958 45.455 21.47 4.79 0.00 3.36
1283 1355 1.635487 AGCTTAGCAACCATGGAAGGA 59.365 47.619 21.47 0.00 0.00 3.36
1284 1356 2.134789 AGCTTAGCAACCATGGAAGG 57.865 50.000 21.47 8.25 0.00 3.46
1285 1357 3.507233 TCAAAGCTTAGCAACCATGGAAG 59.493 43.478 21.47 12.29 0.00 3.46
1502 1574 4.832608 AATCCGACGGGGCGCTTC 62.833 66.667 15.25 0.00 34.94 3.86
1508 1580 1.735571 CTACAAACAAATCCGACGGGG 59.264 52.381 15.25 4.18 37.02 5.73
1515 1587 3.874392 ATGGCAGCTACAAACAAATCC 57.126 42.857 0.00 0.00 0.00 3.01
1535 1607 0.747852 TACGTGACACACTGCAGGAA 59.252 50.000 19.93 0.00 31.34 3.36
1609 1689 2.273449 CTGCCGGGAAGCTTGGAT 59.727 61.111 2.10 0.00 0.00 3.41
1894 1977 2.986979 TAGTGACCGAGTGGCGCA 60.987 61.111 10.83 0.00 39.70 6.09
2245 2328 0.810031 GGATGCGGCGACATTAGTGT 60.810 55.000 12.98 0.00 42.49 3.55
2278 2365 0.319040 CCATCGACGACTAGGCATGG 60.319 60.000 0.00 0.00 32.78 3.66
2296 2387 2.694760 GCAGCCAGCAACTACAGCC 61.695 63.158 0.00 0.00 44.79 4.85
2366 2457 9.811995 GGCGGATAAGATAATGTACATGTAATA 57.188 33.333 9.63 0.02 0.00 0.98
2395 2486 5.776716 TCATCATCTATGACATAGCAGTGGA 59.223 40.000 16.38 9.01 39.77 4.02
2396 2487 6.034161 TCATCATCTATGACATAGCAGTGG 57.966 41.667 16.38 7.12 39.77 4.00
2397 2488 5.577554 GCTCATCATCTATGACATAGCAGTG 59.422 44.000 16.38 14.05 39.77 3.66
2398 2489 5.481122 AGCTCATCATCTATGACATAGCAGT 59.519 40.000 16.38 3.85 39.77 4.40
2399 2490 5.968254 AGCTCATCATCTATGACATAGCAG 58.032 41.667 16.38 11.35 39.77 4.24
2508 2842 2.094700 TCGATCGCACTAACTCAAGCTT 60.095 45.455 11.09 0.00 0.00 3.74
2623 2957 3.669354 GAGTGATTGGCTACTCGGG 57.331 57.895 0.00 0.00 34.60 5.14
2648 2982 8.181573 CAGTCTCTCTCACTACAAGATCTTTAC 58.818 40.741 4.86 0.00 0.00 2.01
2655 2989 6.116711 AGTACAGTCTCTCTCACTACAAGA 57.883 41.667 0.00 0.00 0.00 3.02
2657 2991 9.767228 GATATAGTACAGTCTCTCTCACTACAA 57.233 37.037 0.00 0.00 0.00 2.41
2706 3065 6.484643 ACGTACATTACATAGGATGTCGTACT 59.515 38.462 16.56 0.00 43.67 2.73
2707 3066 6.662616 ACGTACATTACATAGGATGTCGTAC 58.337 40.000 12.43 12.43 43.67 3.67
2708 3067 6.866010 ACGTACATTACATAGGATGTCGTA 57.134 37.500 0.00 0.00 43.67 3.43
2709 3068 5.762825 ACGTACATTACATAGGATGTCGT 57.237 39.130 0.00 0.00 43.67 4.34
2710 3069 5.787062 CGTACGTACATTACATAGGATGTCG 59.213 44.000 24.50 1.48 43.67 4.35
2711 3070 6.662616 ACGTACGTACATTACATAGGATGTC 58.337 40.000 21.41 0.00 43.67 3.06
2713 3072 8.232513 ACATACGTACGTACATTACATAGGATG 58.767 37.037 28.99 20.46 33.01 3.51
2714 3073 8.232513 CACATACGTACGTACATTACATAGGAT 58.767 37.037 28.99 7.90 33.01 3.24
2716 3075 7.355017 ACACATACGTACGTACATTACATAGG 58.645 38.462 28.99 10.90 33.01 2.57
2718 3077 9.008289 CAAACACATACGTACGTACATTACATA 57.992 33.333 28.99 7.24 33.01 2.29
2720 3079 7.080724 TCAAACACATACGTACGTACATTACA 58.919 34.615 28.99 8.81 33.01 2.41
2721 3080 7.491254 TCAAACACATACGTACGTACATTAC 57.509 36.000 28.99 0.57 33.01 1.89
2722 3081 7.967303 TGATCAAACACATACGTACGTACATTA 59.033 33.333 28.99 15.06 33.01 1.90
2723 3082 6.807720 TGATCAAACACATACGTACGTACATT 59.192 34.615 28.99 17.29 33.01 2.71
2724 3083 6.324042 TGATCAAACACATACGTACGTACAT 58.676 36.000 28.99 17.49 33.01 2.29
2728 3087 6.453265 CGAATTGATCAAACACATACGTACGT 60.453 38.462 25.98 25.98 0.00 3.57
2729 3088 5.888890 CGAATTGATCAAACACATACGTACG 59.111 40.000 15.01 15.01 0.00 3.67
2731 3090 6.366604 ACACGAATTGATCAAACACATACGTA 59.633 34.615 13.09 0.00 0.00 3.57
2732 3091 5.178623 ACACGAATTGATCAAACACATACGT 59.821 36.000 13.09 12.57 0.00 3.57
2734 3093 5.794945 CCACACGAATTGATCAAACACATAC 59.205 40.000 13.09 0.00 0.00 2.39
2755 3123 2.289565 GGACCAAGCAATAGTAGCCAC 58.710 52.381 0.00 0.00 0.00 5.01
2761 3129 1.480954 ACGATCGGACCAAGCAATAGT 59.519 47.619 20.98 0.00 0.00 2.12
2762 3130 1.860950 CACGATCGGACCAAGCAATAG 59.139 52.381 20.98 0.00 0.00 1.73
2763 3131 1.934589 CACGATCGGACCAAGCAATA 58.065 50.000 20.98 0.00 0.00 1.90
2764 3132 1.369091 GCACGATCGGACCAAGCAAT 61.369 55.000 20.98 0.00 0.00 3.56
2779 3147 0.249238 CCTGCCTAGCTTCTAGCACG 60.249 60.000 0.00 0.00 45.56 5.34
2781 3149 1.050988 CCCCTGCCTAGCTTCTAGCA 61.051 60.000 0.00 0.00 45.56 3.49
2919 3295 1.283181 GATCGATCGACCGACCTGG 59.717 63.158 22.06 0.00 41.70 4.45
2920 3296 0.593618 ATGATCGATCGACCGACCTG 59.406 55.000 22.06 0.00 41.70 4.00
2921 3297 0.593618 CATGATCGATCGACCGACCT 59.406 55.000 22.06 2.53 41.70 3.85
2922 3298 0.387367 CCATGATCGATCGACCGACC 60.387 60.000 22.06 0.00 41.70 4.79
2923 3299 0.387367 CCCATGATCGATCGACCGAC 60.387 60.000 22.06 12.53 41.70 4.79
2924 3300 1.524008 CCCCATGATCGATCGACCGA 61.524 60.000 22.06 3.30 43.16 4.69
2925 3301 1.080501 CCCCATGATCGATCGACCG 60.081 63.158 22.06 8.85 0.00 4.79
3048 3429 1.068588 CCACACGCCTGCTAGCTAATA 59.931 52.381 17.23 0.00 0.00 0.98
3049 3430 0.179073 CCACACGCCTGCTAGCTAAT 60.179 55.000 17.23 0.00 0.00 1.73
3079 3538 0.392998 CGGTTGGGACTGGGAATGAG 60.393 60.000 0.00 0.00 0.00 2.90
3080 3539 1.682849 CGGTTGGGACTGGGAATGA 59.317 57.895 0.00 0.00 0.00 2.57
3081 3540 1.378514 CCGGTTGGGACTGGGAATG 60.379 63.158 0.00 0.00 46.76 2.67
3090 3549 1.268992 AATCATCCGTCCGGTTGGGA 61.269 55.000 14.82 12.82 44.68 4.37
3091 3550 0.466543 TAATCATCCGTCCGGTTGGG 59.533 55.000 14.82 8.13 36.07 4.12
3092 3551 1.411246 TCTAATCATCCGTCCGGTTGG 59.589 52.381 14.82 4.64 36.07 3.77
3093 3552 2.882927 TCTAATCATCCGTCCGGTTG 57.117 50.000 0.00 9.91 36.57 3.77
3094 3553 4.831155 TCTAATCTAATCATCCGTCCGGTT 59.169 41.667 0.00 0.00 36.47 4.44
3147 3606 0.179176 TAATCAAATGCGTGGCGTGC 60.179 50.000 0.00 0.00 0.00 5.34
3188 3647 9.213819 GAGCAATCAAATGTGTTTTTCTTTTTC 57.786 29.630 0.00 0.00 0.00 2.29
3189 3648 7.904461 CGAGCAATCAAATGTGTTTTTCTTTTT 59.096 29.630 0.00 0.00 0.00 1.94
3191 3650 6.756074 TCGAGCAATCAAATGTGTTTTTCTTT 59.244 30.769 0.00 0.00 0.00 2.52
3195 3654 6.449698 AGATCGAGCAATCAAATGTGTTTTT 58.550 32.000 2.38 0.00 0.00 1.94
3196 3655 6.017400 AGATCGAGCAATCAAATGTGTTTT 57.983 33.333 2.38 0.00 0.00 2.43
3197 3656 5.633830 AGATCGAGCAATCAAATGTGTTT 57.366 34.783 2.38 0.00 0.00 2.83
3198 3657 5.633830 AAGATCGAGCAATCAAATGTGTT 57.366 34.783 2.38 0.00 0.00 3.32
3200 3659 8.554528 AGTAATAAGATCGAGCAATCAAATGTG 58.445 33.333 2.38 0.00 0.00 3.21
3201 3660 8.668510 AGTAATAAGATCGAGCAATCAAATGT 57.331 30.769 2.38 0.00 0.00 2.71
3202 3661 8.986847 AGAGTAATAAGATCGAGCAATCAAATG 58.013 33.333 2.38 0.00 0.00 2.32



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.