Multiple sequence alignment - TraesCS3B01G297600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G297600 chr3B 100.000 3386 0 0 1 3386 477330010 477326625 0.000000e+00 6253.0
1 TraesCS3B01G297600 chr3B 94.215 121 5 1 467 587 819925510 819925628 2.080000e-42 183.0
2 TraesCS3B01G297600 chr3B 92.308 130 7 2 464 593 614194120 614193994 7.460000e-42 182.0
3 TraesCS3B01G297600 chr3B 93.443 122 5 2 469 590 796656458 796656576 9.650000e-41 178.0
4 TraesCS3B01G297600 chr3B 79.245 106 18 4 2066 2169 452754796 452754899 1.690000e-08 71.3
5 TraesCS3B01G297600 chr3A 93.115 1743 70 13 693 2420 488110064 488108357 0.000000e+00 2508.0
6 TraesCS3B01G297600 chr3A 100.000 31 0 0 663 693 488110108 488110078 1.310000e-04 58.4
7 TraesCS3B01G297600 chr3D 92.568 1682 93 18 930 2596 365929340 365927676 0.000000e+00 2385.0
8 TraesCS3B01G297600 chr3D 93.089 246 12 3 693 938 365932982 365932742 4.160000e-94 355.0
9 TraesCS3B01G297600 chr3D 94.340 212 7 3 723 934 365932462 365932256 1.520000e-83 320.0
10 TraesCS3B01G297600 chr3D 93.220 177 7 3 723 899 365931148 365930977 4.340000e-64 255.0
11 TraesCS3B01G297600 chr3D 92.655 177 8 3 723 899 365931974 365931803 2.020000e-62 250.0
12 TraesCS3B01G297600 chr3D 92.090 177 9 3 723 899 365931557 365931386 9.390000e-61 244.0
13 TraesCS3B01G297600 chr3D 89.655 174 16 1 293 466 137021023 137020852 1.580000e-53 220.0
14 TraesCS3B01G297600 chr7A 98.990 792 8 0 2595 3386 48007970 48007179 0.000000e+00 1419.0
15 TraesCS3B01G297600 chr7A 89.944 179 16 2 290 466 707996291 707996113 2.630000e-56 230.0
16 TraesCS3B01G297600 chr7A 90.173 173 15 2 293 463 730830677 730830849 1.220000e-54 224.0
17 TraesCS3B01G297600 chr2B 98.615 794 10 1 2594 3386 198096416 198095623 0.000000e+00 1404.0
18 TraesCS3B01G297600 chr2B 92.800 125 6 2 466 590 632039497 632039618 9.650000e-41 178.0
19 TraesCS3B01G297600 chr2B 92.126 127 6 2 464 590 91234361 91234483 3.470000e-40 176.0
20 TraesCS3B01G297600 chr6B 97.733 794 11 1 2593 3386 159804834 159804048 0.000000e+00 1360.0
21 TraesCS3B01G297600 chr6B 94.336 512 21 6 2595 3099 503894523 503894013 0.000000e+00 778.0
22 TraesCS3B01G297600 chr6B 92.800 125 5 3 469 592 34198189 34198310 9.650000e-41 178.0
23 TraesCS3B01G297600 chr5A 97.598 791 10 1 2596 3386 569166497 569167278 0.000000e+00 1347.0
24 TraesCS3B01G297600 chr5A 96.843 792 9 1 2595 3386 456075403 456076178 0.000000e+00 1310.0
25 TraesCS3B01G297600 chr7B 97.219 791 21 1 2596 3386 85873165 85872376 0.000000e+00 1338.0
26 TraesCS3B01G297600 chr7B 93.725 510 24 6 2595 3097 33834244 33833736 0.000000e+00 758.0
27 TraesCS3B01G297600 chr7B 97.578 289 7 0 3098 3386 78129126 78129414 2.350000e-136 496.0
28 TraesCS3B01G297600 chr7B 82.796 93 10 3 2416 2502 544324624 544324716 1.010000e-10 78.7
29 TraesCS3B01G297600 chr7B 91.071 56 5 0 2447 2502 296348699 296348644 3.620000e-10 76.8
30 TraesCS3B01G297600 chr7B 92.453 53 4 0 2450 2502 708465896 708465844 3.620000e-10 76.8
31 TraesCS3B01G297600 chr4B 94.314 510 23 4 2596 3099 545063838 545064347 0.000000e+00 776.0
32 TraesCS3B01G297600 chr4B 98.618 434 6 0 2953 3386 240148399 240148832 0.000000e+00 769.0
33 TraesCS3B01G297600 chr4B 92.913 508 32 3 2593 3099 545077152 545077656 0.000000e+00 736.0
34 TraesCS3B01G297600 chr4B 97.232 289 8 0 3098 3386 545064256 545064544 1.090000e-134 490.0
35 TraesCS3B01G297600 chr4B 96.886 289 9 0 3098 3386 545077565 545077853 5.080000e-133 484.0
36 TraesCS3B01G297600 chr4B 91.667 132 7 2 462 593 551745501 551745374 2.680000e-41 180.0
37 TraesCS3B01G297600 chr4B 78.295 129 24 4 2043 2169 24664552 24664426 2.800000e-11 80.5
38 TraesCS3B01G297600 chr4B 80.952 105 14 3 2419 2517 541857876 541857772 1.010000e-10 78.7
39 TraesCS3B01G297600 chr4B 87.879 66 8 0 2447 2512 671812053 671812118 1.010000e-10 78.7
40 TraesCS3B01G297600 chr2D 89.944 179 14 3 293 470 108278181 108278356 9.450000e-56 228.0
41 TraesCS3B01G297600 chr2D 81.915 94 11 2 2415 2502 427953671 427953764 1.300000e-09 75.0
42 TraesCS3B01G297600 chr2D 78.947 95 16 4 2066 2158 584898285 584898377 1.010000e-05 62.1
43 TraesCS3B01G297600 chr1D 89.944 179 14 3 293 470 51741824 51741999 9.450000e-56 228.0
44 TraesCS3B01G297600 chr1D 88.764 178 18 2 293 470 51798564 51798739 2.050000e-52 217.0
45 TraesCS3B01G297600 chr1D 88.764 178 18 2 293 470 51803592 51803767 2.050000e-52 217.0
46 TraesCS3B01G297600 chr5B 89.266 177 17 2 287 463 35248025 35248199 1.580000e-53 220.0
47 TraesCS3B01G297600 chr1A 89.326 178 16 3 289 463 544732079 544732256 1.580000e-53 220.0
48 TraesCS3B01G297600 chr1B 92.800 125 5 3 470 593 118429524 118429403 9.650000e-41 178.0
49 TraesCS3B01G297600 chr1B 92.126 127 6 2 464 590 12257471 12257593 3.470000e-40 176.0
50 TraesCS3B01G297600 chr7D 88.060 67 8 0 2447 2513 530896977 530897043 2.800000e-11 80.5
51 TraesCS3B01G297600 chr4D 78.295 129 24 4 2043 2169 14830559 14830433 2.800000e-11 80.5
52 TraesCS3B01G297600 chr4A 78.295 129 24 4 2043 2169 456475117 456475243 2.800000e-11 80.5
53 TraesCS3B01G297600 chr4A 85.714 70 9 1 2448 2516 29074810 29074879 4.690000e-09 73.1
54 TraesCS3B01G297600 chr4A 76.744 129 26 4 2043 2169 586728239 586728365 6.060000e-08 69.4
55 TraesCS3B01G297600 chr6D 87.879 66 7 1 2430 2495 444708135 444708199 3.620000e-10 76.8
56 TraesCS3B01G297600 chr6D 77.612 134 22 7 2045 2174 429945077 429944948 1.300000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G297600 chr3B 477326625 477330010 3385 True 6253.000000 6253 100.000000 1 3386 1 chr3B.!!$R1 3385
1 TraesCS3B01G297600 chr3A 488108357 488110108 1751 True 1283.200000 2508 96.557500 663 2420 2 chr3A.!!$R1 1757
2 TraesCS3B01G297600 chr3D 365927676 365932982 5306 True 634.833333 2385 92.993667 693 2596 6 chr3D.!!$R2 1903
3 TraesCS3B01G297600 chr7A 48007179 48007970 791 True 1419.000000 1419 98.990000 2595 3386 1 chr7A.!!$R1 791
4 TraesCS3B01G297600 chr2B 198095623 198096416 793 True 1404.000000 1404 98.615000 2594 3386 1 chr2B.!!$R1 792
5 TraesCS3B01G297600 chr6B 159804048 159804834 786 True 1360.000000 1360 97.733000 2593 3386 1 chr6B.!!$R1 793
6 TraesCS3B01G297600 chr6B 503894013 503894523 510 True 778.000000 778 94.336000 2595 3099 1 chr6B.!!$R2 504
7 TraesCS3B01G297600 chr5A 569166497 569167278 781 False 1347.000000 1347 97.598000 2596 3386 1 chr5A.!!$F2 790
8 TraesCS3B01G297600 chr5A 456075403 456076178 775 False 1310.000000 1310 96.843000 2595 3386 1 chr5A.!!$F1 791
9 TraesCS3B01G297600 chr7B 85872376 85873165 789 True 1338.000000 1338 97.219000 2596 3386 1 chr7B.!!$R2 790
10 TraesCS3B01G297600 chr7B 33833736 33834244 508 True 758.000000 758 93.725000 2595 3097 1 chr7B.!!$R1 502
11 TraesCS3B01G297600 chr4B 545063838 545064544 706 False 633.000000 776 95.773000 2596 3386 2 chr4B.!!$F3 790
12 TraesCS3B01G297600 chr4B 545077152 545077853 701 False 610.000000 736 94.899500 2593 3386 2 chr4B.!!$F4 793

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
656 657 0.033781 TTCCGTCCTACACAAACCCG 59.966 55.0 0.0 0.0 0.0 5.28 F
839 1344 0.320421 TTCCCGTGCTTGTGAGTAGC 60.320 55.0 0.0 0.0 39.1 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1583 5014 0.175073 GTCGGAGGCGTAAATCAGGT 59.825 55.0 0.00 0.00 0.00 4.00 R
2541 5981 0.179124 GAGAGGATGACGGCACACTC 60.179 60.0 14.54 14.54 32.96 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.382821 TTGTGCGTTTAAAAACAACAAGAG 57.617 33.333 14.84 0.00 38.81 2.85
25 26 5.462405 TGTGCGTTTAAAAACAACAAGAGT 58.538 33.333 6.41 0.00 38.81 3.24
26 27 6.609533 TGTGCGTTTAAAAACAACAAGAGTA 58.390 32.000 6.41 0.00 38.81 2.59
27 28 7.082602 TGTGCGTTTAAAAACAACAAGAGTAA 58.917 30.769 6.41 0.00 38.81 2.24
28 29 7.594015 TGTGCGTTTAAAAACAACAAGAGTAAA 59.406 29.630 6.41 0.00 38.81 2.01
29 30 8.426251 GTGCGTTTAAAAACAACAAGAGTAAAA 58.574 29.630 6.41 0.00 38.81 1.52
30 31 8.426251 TGCGTTTAAAAACAACAAGAGTAAAAC 58.574 29.630 6.41 0.00 38.81 2.43
31 32 8.426251 GCGTTTAAAAACAACAAGAGTAAAACA 58.574 29.630 6.41 0.00 38.81 2.83
40 41 9.783256 AACAACAAGAGTAAAACAATACACTTC 57.217 29.630 0.00 0.00 35.43 3.01
41 42 8.120465 ACAACAAGAGTAAAACAATACACTTCG 58.880 33.333 0.00 0.00 35.43 3.79
42 43 7.781548 ACAAGAGTAAAACAATACACTTCGT 57.218 32.000 0.00 0.00 35.43 3.85
43 44 8.205131 ACAAGAGTAAAACAATACACTTCGTT 57.795 30.769 0.00 0.00 35.43 3.85
44 45 8.671028 ACAAGAGTAAAACAATACACTTCGTTT 58.329 29.630 0.00 0.00 35.43 3.60
45 46 8.943925 CAAGAGTAAAACAATACACTTCGTTTG 58.056 33.333 0.00 0.00 35.43 2.93
46 47 8.428186 AGAGTAAAACAATACACTTCGTTTGA 57.572 30.769 0.00 0.00 32.19 2.69
47 48 8.885722 AGAGTAAAACAATACACTTCGTTTGAA 58.114 29.630 0.00 0.00 32.19 2.69
56 57 2.957576 CTTCGTTTGAAGGTGAGCTG 57.042 50.000 0.00 0.00 46.44 4.24
57 58 2.213499 CTTCGTTTGAAGGTGAGCTGT 58.787 47.619 0.00 0.00 46.44 4.40
58 59 1.865865 TCGTTTGAAGGTGAGCTGTC 58.134 50.000 0.00 0.00 0.00 3.51
59 60 1.138069 TCGTTTGAAGGTGAGCTGTCA 59.862 47.619 0.00 0.00 0.00 3.58
60 61 2.146342 CGTTTGAAGGTGAGCTGTCAT 58.854 47.619 0.00 0.00 34.36 3.06
61 62 2.549754 CGTTTGAAGGTGAGCTGTCATT 59.450 45.455 0.00 0.00 34.36 2.57
62 63 3.003689 CGTTTGAAGGTGAGCTGTCATTT 59.996 43.478 0.00 0.00 34.36 2.32
63 64 4.293415 GTTTGAAGGTGAGCTGTCATTTG 58.707 43.478 0.00 0.00 34.36 2.32
64 65 2.507484 TGAAGGTGAGCTGTCATTTGG 58.493 47.619 0.00 0.00 34.36 3.28
65 66 2.106338 TGAAGGTGAGCTGTCATTTGGA 59.894 45.455 0.00 0.00 34.36 3.53
66 67 3.245016 TGAAGGTGAGCTGTCATTTGGAT 60.245 43.478 0.00 0.00 34.36 3.41
67 68 3.446442 AGGTGAGCTGTCATTTGGATT 57.554 42.857 0.00 0.00 34.36 3.01
68 69 3.350833 AGGTGAGCTGTCATTTGGATTC 58.649 45.455 0.00 0.00 34.36 2.52
69 70 2.096496 GGTGAGCTGTCATTTGGATTCG 59.904 50.000 0.00 0.00 34.36 3.34
70 71 3.002791 GTGAGCTGTCATTTGGATTCGA 58.997 45.455 0.00 0.00 34.36 3.71
71 72 3.063180 GTGAGCTGTCATTTGGATTCGAG 59.937 47.826 0.00 0.00 34.36 4.04
72 73 3.055891 TGAGCTGTCATTTGGATTCGAGA 60.056 43.478 0.00 0.00 0.00 4.04
73 74 3.529533 AGCTGTCATTTGGATTCGAGAG 58.470 45.455 0.00 0.00 0.00 3.20
74 75 3.055530 AGCTGTCATTTGGATTCGAGAGT 60.056 43.478 0.00 0.00 0.00 3.24
75 76 3.308323 GCTGTCATTTGGATTCGAGAGTC 59.692 47.826 0.00 0.00 0.00 3.36
76 77 4.753233 CTGTCATTTGGATTCGAGAGTCT 58.247 43.478 0.00 0.00 0.00 3.24
77 78 5.679894 GCTGTCATTTGGATTCGAGAGTCTA 60.680 44.000 0.00 0.00 0.00 2.59
78 79 6.471233 TGTCATTTGGATTCGAGAGTCTAT 57.529 37.500 0.00 0.00 0.00 1.98
79 80 6.276091 TGTCATTTGGATTCGAGAGTCTATG 58.724 40.000 0.00 0.00 0.00 2.23
80 81 6.096846 TGTCATTTGGATTCGAGAGTCTATGA 59.903 38.462 0.00 0.00 0.00 2.15
81 82 7.151308 GTCATTTGGATTCGAGAGTCTATGAT 58.849 38.462 0.00 0.00 0.00 2.45
82 83 7.116090 GTCATTTGGATTCGAGAGTCTATGATG 59.884 40.741 0.00 6.07 0.00 3.07
83 84 6.471233 TTTGGATTCGAGAGTCTATGATGT 57.529 37.500 0.00 0.00 0.00 3.06
84 85 7.582667 TTTGGATTCGAGAGTCTATGATGTA 57.417 36.000 0.00 0.00 0.00 2.29
85 86 6.561737 TGGATTCGAGAGTCTATGATGTAC 57.438 41.667 0.00 0.00 0.00 2.90
86 87 6.299922 TGGATTCGAGAGTCTATGATGTACT 58.700 40.000 0.00 0.00 0.00 2.73
87 88 6.428465 TGGATTCGAGAGTCTATGATGTACTC 59.572 42.308 0.00 0.00 39.95 2.59
88 89 6.128117 GGATTCGAGAGTCTATGATGTACTCC 60.128 46.154 0.00 0.00 40.42 3.85
89 90 4.643463 TCGAGAGTCTATGATGTACTCCC 58.357 47.826 0.00 0.00 40.42 4.30
90 91 4.348461 TCGAGAGTCTATGATGTACTCCCT 59.652 45.833 0.00 0.00 40.42 4.20
91 92 5.067273 CGAGAGTCTATGATGTACTCCCTT 58.933 45.833 0.00 0.00 40.42 3.95
92 93 5.180492 CGAGAGTCTATGATGTACTCCCTTC 59.820 48.000 0.00 0.00 40.42 3.46
93 94 6.274322 AGAGTCTATGATGTACTCCCTTCT 57.726 41.667 0.00 0.00 40.42 2.85
94 95 6.678547 AGAGTCTATGATGTACTCCCTTCTT 58.321 40.000 0.00 0.00 40.42 2.52
95 96 7.129425 AGAGTCTATGATGTACTCCCTTCTTT 58.871 38.462 0.00 0.00 40.42 2.52
96 97 7.286775 AGAGTCTATGATGTACTCCCTTCTTTC 59.713 40.741 0.00 0.00 40.42 2.62
97 98 6.897966 AGTCTATGATGTACTCCCTTCTTTCA 59.102 38.462 0.00 0.00 0.00 2.69
98 99 7.069331 AGTCTATGATGTACTCCCTTCTTTCAG 59.931 40.741 0.00 0.00 0.00 3.02
99 100 7.068839 GTCTATGATGTACTCCCTTCTTTCAGA 59.931 40.741 0.00 0.00 0.00 3.27
100 101 6.627087 ATGATGTACTCCCTTCTTTCAGAA 57.373 37.500 0.00 0.00 32.50 3.02
101 102 6.627087 TGATGTACTCCCTTCTTTCAGAAT 57.373 37.500 0.00 0.00 33.13 2.40
102 103 7.020827 TGATGTACTCCCTTCTTTCAGAATT 57.979 36.000 0.00 0.00 33.13 2.17
103 104 8.146053 TGATGTACTCCCTTCTTTCAGAATTA 57.854 34.615 0.00 0.00 33.13 1.40
104 105 8.041323 TGATGTACTCCCTTCTTTCAGAATTAC 58.959 37.037 0.00 0.00 33.13 1.89
105 106 7.554959 TGTACTCCCTTCTTTCAGAATTACT 57.445 36.000 0.00 0.00 33.13 2.24
106 107 7.974504 TGTACTCCCTTCTTTCAGAATTACTT 58.025 34.615 0.00 0.00 33.13 2.24
107 108 7.878127 TGTACTCCCTTCTTTCAGAATTACTTG 59.122 37.037 0.00 0.00 33.13 3.16
108 109 6.842676 ACTCCCTTCTTTCAGAATTACTTGT 58.157 36.000 0.00 0.00 33.13 3.16
109 110 6.937465 ACTCCCTTCTTTCAGAATTACTTGTC 59.063 38.462 0.00 0.00 33.13 3.18
110 111 5.932303 TCCCTTCTTTCAGAATTACTTGTCG 59.068 40.000 0.00 0.00 33.13 4.35
111 112 5.701290 CCCTTCTTTCAGAATTACTTGTCGT 59.299 40.000 0.00 0.00 33.13 4.34
112 113 6.347725 CCCTTCTTTCAGAATTACTTGTCGTG 60.348 42.308 0.00 0.00 33.13 4.35
113 114 6.202954 CCTTCTTTCAGAATTACTTGTCGTGT 59.797 38.462 0.00 0.00 33.13 4.49
114 115 7.384115 CCTTCTTTCAGAATTACTTGTCGTGTA 59.616 37.037 0.00 0.00 33.13 2.90
115 116 8.651391 TTCTTTCAGAATTACTTGTCGTGTAA 57.349 30.769 0.00 0.00 34.87 2.41
116 117 8.651391 TCTTTCAGAATTACTTGTCGTGTAAA 57.349 30.769 0.00 0.00 34.20 2.01
117 118 9.268268 TCTTTCAGAATTACTTGTCGTGTAAAT 57.732 29.630 0.00 0.00 34.20 1.40
120 121 9.917129 TTCAGAATTACTTGTCGTGTAAATAGA 57.083 29.630 0.00 0.00 34.20 1.98
185 186 6.539649 TCAGTTTTGTGAGAAGTAATTCGG 57.460 37.500 0.00 0.00 0.00 4.30
186 187 5.468746 TCAGTTTTGTGAGAAGTAATTCGGG 59.531 40.000 0.00 0.00 0.00 5.14
187 188 5.468746 CAGTTTTGTGAGAAGTAATTCGGGA 59.531 40.000 0.00 0.00 0.00 5.14
188 189 5.469084 AGTTTTGTGAGAAGTAATTCGGGAC 59.531 40.000 0.00 0.00 0.00 4.46
208 209 2.617308 ACGGAGTGAGTATGATGGTACG 59.383 50.000 0.00 0.00 42.51 3.67
209 210 2.617308 CGGAGTGAGTATGATGGTACGT 59.383 50.000 0.00 0.00 0.00 3.57
210 211 3.548214 CGGAGTGAGTATGATGGTACGTG 60.548 52.174 0.00 0.00 0.00 4.49
211 212 3.372954 GAGTGAGTATGATGGTACGTGC 58.627 50.000 0.00 0.00 0.00 5.34
212 213 2.758423 AGTGAGTATGATGGTACGTGCA 59.242 45.455 5.86 0.00 0.00 4.57
213 214 3.384789 AGTGAGTATGATGGTACGTGCAT 59.615 43.478 5.86 0.00 0.00 3.96
214 215 3.736252 GTGAGTATGATGGTACGTGCATC 59.264 47.826 5.86 7.44 0.00 3.91
215 216 2.980476 GAGTATGATGGTACGTGCATCG 59.020 50.000 5.86 7.07 46.00 3.84
216 217 2.621526 AGTATGATGGTACGTGCATCGA 59.378 45.455 14.18 0.00 42.86 3.59
217 218 2.820059 ATGATGGTACGTGCATCGAT 57.180 45.000 14.18 0.00 42.86 3.59
218 219 2.134201 TGATGGTACGTGCATCGATC 57.866 50.000 14.18 7.93 42.86 3.69
219 220 1.407258 TGATGGTACGTGCATCGATCA 59.593 47.619 14.18 9.92 42.86 2.92
220 221 2.054363 GATGGTACGTGCATCGATCAG 58.946 52.381 14.18 0.00 42.86 2.90
221 222 0.815095 TGGTACGTGCATCGATCAGT 59.185 50.000 14.18 0.00 42.86 3.41
222 223 1.203758 TGGTACGTGCATCGATCAGTT 59.796 47.619 14.18 0.00 42.86 3.16
223 224 1.852895 GGTACGTGCATCGATCAGTTC 59.147 52.381 14.18 0.00 42.86 3.01
224 225 1.852895 GTACGTGCATCGATCAGTTCC 59.147 52.381 14.18 0.00 42.86 3.62
225 226 0.460284 ACGTGCATCGATCAGTTCCC 60.460 55.000 14.18 0.00 42.86 3.97
226 227 0.179100 CGTGCATCGATCAGTTCCCT 60.179 55.000 0.00 0.00 42.86 4.20
227 228 1.740380 CGTGCATCGATCAGTTCCCTT 60.740 52.381 0.00 0.00 42.86 3.95
228 229 2.359900 GTGCATCGATCAGTTCCCTTT 58.640 47.619 0.00 0.00 0.00 3.11
229 230 2.096496 GTGCATCGATCAGTTCCCTTTG 59.904 50.000 0.00 0.00 0.00 2.77
230 231 2.290260 TGCATCGATCAGTTCCCTTTGT 60.290 45.455 0.00 0.00 0.00 2.83
231 232 2.749621 GCATCGATCAGTTCCCTTTGTT 59.250 45.455 0.00 0.00 0.00 2.83
232 233 3.191371 GCATCGATCAGTTCCCTTTGTTT 59.809 43.478 0.00 0.00 0.00 2.83
233 234 4.321230 GCATCGATCAGTTCCCTTTGTTTT 60.321 41.667 0.00 0.00 0.00 2.43
234 235 4.829064 TCGATCAGTTCCCTTTGTTTTG 57.171 40.909 0.00 0.00 0.00 2.44
235 236 4.204012 TCGATCAGTTCCCTTTGTTTTGT 58.796 39.130 0.00 0.00 0.00 2.83
236 237 4.642885 TCGATCAGTTCCCTTTGTTTTGTT 59.357 37.500 0.00 0.00 0.00 2.83
237 238 5.126384 TCGATCAGTTCCCTTTGTTTTGTTT 59.874 36.000 0.00 0.00 0.00 2.83
238 239 5.810074 CGATCAGTTCCCTTTGTTTTGTTTT 59.190 36.000 0.00 0.00 0.00 2.43
239 240 6.019881 CGATCAGTTCCCTTTGTTTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
240 241 5.483811 TCAGTTCCCTTTGTTTTGTTTTCC 58.516 37.500 0.00 0.00 0.00 3.13
241 242 4.328712 CAGTTCCCTTTGTTTTGTTTTCCG 59.671 41.667 0.00 0.00 0.00 4.30
242 243 3.528597 TCCCTTTGTTTTGTTTTCCGG 57.471 42.857 0.00 0.00 0.00 5.14
243 244 2.168728 TCCCTTTGTTTTGTTTTCCGGG 59.831 45.455 0.00 0.00 0.00 5.73
244 245 2.168728 CCCTTTGTTTTGTTTTCCGGGA 59.831 45.455 0.00 0.00 0.00 5.14
245 246 3.181459 CCCTTTGTTTTGTTTTCCGGGAT 60.181 43.478 0.00 0.00 0.00 3.85
246 247 3.807071 CCTTTGTTTTGTTTTCCGGGATG 59.193 43.478 0.00 0.00 0.00 3.51
247 248 4.442192 CCTTTGTTTTGTTTTCCGGGATGA 60.442 41.667 0.00 0.00 0.00 2.92
248 249 3.719173 TGTTTTGTTTTCCGGGATGAC 57.281 42.857 0.00 0.16 0.00 3.06
249 250 2.362717 TGTTTTGTTTTCCGGGATGACC 59.637 45.455 0.00 0.00 0.00 4.02
261 262 3.277142 GGGATGACCGGTTCATTACTT 57.723 47.619 9.42 0.00 45.67 2.24
262 263 2.943033 GGGATGACCGGTTCATTACTTG 59.057 50.000 9.42 0.00 45.67 3.16
263 264 3.370103 GGGATGACCGGTTCATTACTTGA 60.370 47.826 9.42 0.00 45.67 3.02
264 265 3.621715 GGATGACCGGTTCATTACTTGAC 59.378 47.826 9.42 0.36 45.67 3.18
265 266 4.504858 GATGACCGGTTCATTACTTGACT 58.495 43.478 9.42 0.00 45.67 3.41
266 267 3.659786 TGACCGGTTCATTACTTGACTG 58.340 45.455 9.42 0.00 32.84 3.51
267 268 3.070446 TGACCGGTTCATTACTTGACTGT 59.930 43.478 9.42 0.00 32.84 3.55
268 269 4.281435 TGACCGGTTCATTACTTGACTGTA 59.719 41.667 9.42 0.00 32.84 2.74
269 270 5.217978 ACCGGTTCATTACTTGACTGTAA 57.782 39.130 0.00 0.00 36.92 2.41
270 271 5.613329 ACCGGTTCATTACTTGACTGTAAA 58.387 37.500 0.00 0.00 36.22 2.01
271 272 6.235664 ACCGGTTCATTACTTGACTGTAAAT 58.764 36.000 0.00 0.00 36.22 1.40
272 273 6.713450 ACCGGTTCATTACTTGACTGTAAATT 59.287 34.615 0.00 0.00 36.22 1.82
273 274 7.879160 ACCGGTTCATTACTTGACTGTAAATTA 59.121 33.333 0.00 0.00 36.22 1.40
274 275 8.723311 CCGGTTCATTACTTGACTGTAAATTAA 58.277 33.333 0.00 0.00 36.22 1.40
283 284 8.025243 ACTTGACTGTAAATTAATGTACCACG 57.975 34.615 12.37 4.94 0.00 4.94
284 285 7.658575 ACTTGACTGTAAATTAATGTACCACGT 59.341 33.333 12.37 7.50 0.00 4.49
285 286 7.966246 TGACTGTAAATTAATGTACCACGTT 57.034 32.000 12.37 0.00 0.00 3.99
286 287 7.798801 TGACTGTAAATTAATGTACCACGTTG 58.201 34.615 12.37 0.00 0.00 4.10
287 288 7.441760 TGACTGTAAATTAATGTACCACGTTGT 59.558 33.333 12.37 0.00 0.00 3.32
288 289 8.830201 ACTGTAAATTAATGTACCACGTTGTA 57.170 30.769 12.37 0.00 0.00 2.41
289 290 9.439500 ACTGTAAATTAATGTACCACGTTGTAT 57.561 29.630 12.37 0.00 0.00 2.29
299 300 8.638685 ATGTACCACGTTGTATATAGTTTGTC 57.361 34.615 7.18 0.00 0.00 3.18
300 301 7.829725 TGTACCACGTTGTATATAGTTTGTCT 58.170 34.615 2.49 0.00 0.00 3.41
301 302 8.955388 TGTACCACGTTGTATATAGTTTGTCTA 58.045 33.333 2.49 0.00 0.00 2.59
302 303 9.787532 GTACCACGTTGTATATAGTTTGTCTAA 57.212 33.333 2.49 0.00 31.94 2.10
304 305 9.880157 ACCACGTTGTATATAGTTTGTCTAATT 57.120 29.630 0.00 0.00 31.94 1.40
332 333 8.429493 CATCTAGATGTTTTCTAAGCATGTCA 57.571 34.615 22.42 0.00 36.50 3.58
333 334 7.834068 TCTAGATGTTTTCTAAGCATGTCAC 57.166 36.000 0.00 0.00 36.50 3.67
334 335 7.386059 TCTAGATGTTTTCTAAGCATGTCACA 58.614 34.615 0.00 0.00 36.50 3.58
335 336 8.043113 TCTAGATGTTTTCTAAGCATGTCACAT 58.957 33.333 0.00 0.00 36.50 3.21
336 337 7.081526 AGATGTTTTCTAAGCATGTCACATC 57.918 36.000 0.00 0.00 39.62 3.06
337 338 6.883217 AGATGTTTTCTAAGCATGTCACATCT 59.117 34.615 5.79 5.79 42.98 2.90
338 339 8.043113 AGATGTTTTCTAAGCATGTCACATCTA 58.957 33.333 9.23 0.00 44.89 1.98
339 340 7.977789 TGTTTTCTAAGCATGTCACATCTAA 57.022 32.000 0.00 0.00 0.00 2.10
340 341 8.389779 TGTTTTCTAAGCATGTCACATCTAAA 57.610 30.769 0.00 0.00 0.00 1.85
341 342 8.289618 TGTTTTCTAAGCATGTCACATCTAAAC 58.710 33.333 0.00 0.00 0.00 2.01
342 343 8.507249 GTTTTCTAAGCATGTCACATCTAAACT 58.493 33.333 0.00 0.00 0.00 2.66
343 344 8.621532 TTTCTAAGCATGTCACATCTAAACTT 57.378 30.769 0.00 0.00 0.00 2.66
344 345 8.621532 TTCTAAGCATGTCACATCTAAACTTT 57.378 30.769 0.00 0.00 0.00 2.66
345 346 8.621532 TCTAAGCATGTCACATCTAAACTTTT 57.378 30.769 0.00 0.00 0.00 2.27
346 347 9.719355 TCTAAGCATGTCACATCTAAACTTTTA 57.281 29.630 0.00 0.00 0.00 1.52
347 348 9.760660 CTAAGCATGTCACATCTAAACTTTTAC 57.239 33.333 0.00 0.00 0.00 2.01
348 349 7.744087 AGCATGTCACATCTAAACTTTTACA 57.256 32.000 0.00 0.00 0.00 2.41
349 350 8.165239 AGCATGTCACATCTAAACTTTTACAA 57.835 30.769 0.00 0.00 0.00 2.41
350 351 8.629158 AGCATGTCACATCTAAACTTTTACAAA 58.371 29.630 0.00 0.00 0.00 2.83
351 352 9.410556 GCATGTCACATCTAAACTTTTACAAAT 57.589 29.630 0.00 0.00 0.00 2.32
356 357 9.601971 TCACATCTAAACTTTTACAAATAACGC 57.398 29.630 0.00 0.00 0.00 4.84
357 358 9.388346 CACATCTAAACTTTTACAAATAACGCA 57.612 29.630 0.00 0.00 0.00 5.24
358 359 9.953697 ACATCTAAACTTTTACAAATAACGCAA 57.046 25.926 0.00 0.00 0.00 4.85
360 361 9.953697 ATCTAAACTTTTACAAATAACGCAACA 57.046 25.926 0.00 0.00 0.00 3.33
361 362 9.784680 TCTAAACTTTTACAAATAACGCAACAA 57.215 25.926 0.00 0.00 0.00 2.83
362 363 9.823979 CTAAACTTTTACAAATAACGCAACAAC 57.176 29.630 0.00 0.00 0.00 3.32
363 364 7.813852 AACTTTTACAAATAACGCAACAACA 57.186 28.000 0.00 0.00 0.00 3.33
364 365 7.813852 ACTTTTACAAATAACGCAACAACAA 57.186 28.000 0.00 0.00 0.00 2.83
365 366 7.890763 ACTTTTACAAATAACGCAACAACAAG 58.109 30.769 0.00 0.00 0.00 3.16
366 367 6.814076 TTTACAAATAACGCAACAACAAGG 57.186 33.333 0.00 0.00 0.00 3.61
367 368 4.640789 ACAAATAACGCAACAACAAGGA 57.359 36.364 0.00 0.00 0.00 3.36
368 369 5.000012 ACAAATAACGCAACAACAAGGAA 58.000 34.783 0.00 0.00 0.00 3.36
369 370 4.801516 ACAAATAACGCAACAACAAGGAAC 59.198 37.500 0.00 0.00 0.00 3.62
370 371 4.640789 AATAACGCAACAACAAGGAACA 57.359 36.364 0.00 0.00 0.00 3.18
371 372 4.640789 ATAACGCAACAACAAGGAACAA 57.359 36.364 0.00 0.00 0.00 2.83
372 373 3.305398 AACGCAACAACAAGGAACAAA 57.695 38.095 0.00 0.00 0.00 2.83
373 374 3.305398 ACGCAACAACAAGGAACAAAA 57.695 38.095 0.00 0.00 0.00 2.44
374 375 3.249917 ACGCAACAACAAGGAACAAAAG 58.750 40.909 0.00 0.00 0.00 2.27
375 376 2.602660 CGCAACAACAAGGAACAAAAGG 59.397 45.455 0.00 0.00 0.00 3.11
376 377 3.674682 CGCAACAACAAGGAACAAAAGGA 60.675 43.478 0.00 0.00 0.00 3.36
377 378 4.249661 GCAACAACAAGGAACAAAAGGAA 58.750 39.130 0.00 0.00 0.00 3.36
378 379 4.693095 GCAACAACAAGGAACAAAAGGAAA 59.307 37.500 0.00 0.00 0.00 3.13
379 380 5.163864 GCAACAACAAGGAACAAAAGGAAAG 60.164 40.000 0.00 0.00 0.00 2.62
380 381 5.738619 ACAACAAGGAACAAAAGGAAAGT 57.261 34.783 0.00 0.00 0.00 2.66
381 382 6.109156 ACAACAAGGAACAAAAGGAAAGTT 57.891 33.333 0.00 0.00 0.00 2.66
382 383 5.931724 ACAACAAGGAACAAAAGGAAAGTTG 59.068 36.000 0.00 0.00 38.71 3.16
383 384 5.084818 ACAAGGAACAAAAGGAAAGTTGG 57.915 39.130 0.00 0.00 0.00 3.77
384 385 4.081142 ACAAGGAACAAAAGGAAAGTTGGG 60.081 41.667 0.00 0.00 0.00 4.12
385 386 3.989056 AGGAACAAAAGGAAAGTTGGGA 58.011 40.909 0.00 0.00 0.00 4.37
386 387 3.704566 AGGAACAAAAGGAAAGTTGGGAC 59.295 43.478 0.00 0.00 0.00 4.46
387 388 3.449377 GGAACAAAAGGAAAGTTGGGACA 59.551 43.478 0.00 0.00 0.00 4.02
422 423 8.506168 AGACCACAAACATAATGTACATTAGG 57.494 34.615 29.36 29.36 39.96 2.69
423 424 8.107095 AGACCACAAACATAATGTACATTAGGT 58.893 33.333 30.46 30.46 46.33 3.08
458 459 9.836864 ACATAATTATGTCACATGTAGATGTGT 57.163 29.630 26.83 14.29 44.41 3.72
495 496 8.631480 AAAAATTTTATACGAGACCAGGTCTT 57.369 30.769 23.78 11.23 43.53 3.01
496 497 9.729281 AAAAATTTTATACGAGACCAGGTCTTA 57.271 29.630 23.78 13.16 43.53 2.10
497 498 9.901172 AAAATTTTATACGAGACCAGGTCTTAT 57.099 29.630 23.78 18.89 43.53 1.73
504 505 6.402456 ACGAGACCAGGTCTTATATAAACC 57.598 41.667 23.78 6.34 43.53 3.27
505 506 5.895534 ACGAGACCAGGTCTTATATAAACCA 59.104 40.000 23.78 0.00 43.53 3.67
506 507 6.040616 ACGAGACCAGGTCTTATATAAACCAG 59.959 42.308 23.78 15.00 43.53 4.00
507 508 6.516860 CGAGACCAGGTCTTATATAAACCAGG 60.517 46.154 23.78 22.48 43.53 4.45
510 511 6.494666 CCAGGTCTTATATAAACCAGGTGA 57.505 41.667 19.93 3.18 35.58 4.02
511 512 6.525629 CCAGGTCTTATATAAACCAGGTGAG 58.474 44.000 19.93 0.00 35.58 3.51
512 513 6.326583 CCAGGTCTTATATAAACCAGGTGAGA 59.673 42.308 19.93 1.86 35.58 3.27
513 514 7.210873 CAGGTCTTATATAAACCAGGTGAGAC 58.789 42.308 19.93 10.99 35.43 3.36
514 515 6.326843 AGGTCTTATATAAACCAGGTGAGACC 59.673 42.308 19.93 16.86 46.84 3.85
515 516 6.464039 GGTCTTATATAAACCAGGTGAGACCC 60.464 46.154 15.96 2.43 42.90 4.46
516 517 5.303589 TCTTATATAAACCAGGTGAGACCCG 59.696 44.000 0.00 0.00 39.75 5.28
517 518 0.252197 ATAAACCAGGTGAGACCCGC 59.748 55.000 0.00 0.00 39.75 6.13
518 519 1.833787 TAAACCAGGTGAGACCCGCC 61.834 60.000 0.00 0.00 45.81 6.13
521 522 4.087892 CAGGTGAGACCCGCCCTG 62.088 72.222 0.00 0.00 46.65 4.45
522 523 4.316823 AGGTGAGACCCGCCCTGA 62.317 66.667 0.00 0.00 46.65 3.86
523 524 3.083997 GGTGAGACCCGCCCTGAT 61.084 66.667 0.00 0.00 39.55 2.90
524 525 2.187946 GTGAGACCCGCCCTGATG 59.812 66.667 0.00 0.00 0.00 3.07
525 526 3.083349 TGAGACCCGCCCTGATGG 61.083 66.667 0.00 0.00 37.09 3.51
526 527 2.764128 GAGACCCGCCCTGATGGA 60.764 66.667 0.00 0.00 35.39 3.41
527 528 2.040464 AGACCCGCCCTGATGGAT 60.040 61.111 0.00 0.00 35.39 3.41
528 529 0.832135 GAGACCCGCCCTGATGGATA 60.832 60.000 0.00 0.00 35.39 2.59
529 530 0.399949 AGACCCGCCCTGATGGATAA 60.400 55.000 0.00 0.00 35.39 1.75
530 531 0.250338 GACCCGCCCTGATGGATAAC 60.250 60.000 0.00 0.00 35.39 1.89
531 532 0.986019 ACCCGCCCTGATGGATAACA 60.986 55.000 0.00 0.00 35.39 2.41
532 533 0.401738 CCCGCCCTGATGGATAACAT 59.598 55.000 0.00 0.00 44.18 2.71
533 534 1.527034 CCGCCCTGATGGATAACATG 58.473 55.000 0.00 0.00 40.72 3.21
534 535 1.202806 CCGCCCTGATGGATAACATGT 60.203 52.381 0.00 0.00 40.72 3.21
535 536 1.875514 CGCCCTGATGGATAACATGTG 59.124 52.381 0.00 0.00 40.72 3.21
536 537 2.233271 GCCCTGATGGATAACATGTGG 58.767 52.381 0.00 0.00 40.72 4.17
537 538 2.233271 CCCTGATGGATAACATGTGGC 58.767 52.381 0.00 0.00 40.72 5.01
538 539 2.423231 CCCTGATGGATAACATGTGGCA 60.423 50.000 0.00 0.00 40.72 4.92
539 540 3.493334 CCTGATGGATAACATGTGGCAT 58.507 45.455 0.00 0.00 40.72 4.40
540 541 3.893200 CCTGATGGATAACATGTGGCATT 59.107 43.478 0.00 0.00 40.72 3.56
541 542 4.022589 CCTGATGGATAACATGTGGCATTC 60.023 45.833 0.00 0.00 40.72 2.67
542 543 4.534797 TGATGGATAACATGTGGCATTCA 58.465 39.130 0.00 0.00 40.72 2.57
543 544 4.338964 TGATGGATAACATGTGGCATTCAC 59.661 41.667 0.00 0.00 46.23 3.18
554 555 4.977741 GTGGCATTCACAAATCACAAAG 57.022 40.909 0.00 0.00 45.39 2.77
555 556 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
556 557 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
557 558 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
558 559 4.092383 GGCATTCACAAATCACAAAGCATC 59.908 41.667 0.00 0.00 0.00 3.91
559 560 4.927425 GCATTCACAAATCACAAAGCATCT 59.073 37.500 0.00 0.00 0.00 2.90
560 561 6.094719 GCATTCACAAATCACAAAGCATCTA 58.905 36.000 0.00 0.00 0.00 1.98
561 562 6.587226 GCATTCACAAATCACAAAGCATCTAA 59.413 34.615 0.00 0.00 0.00 2.10
562 563 7.277098 GCATTCACAAATCACAAAGCATCTAAT 59.723 33.333 0.00 0.00 0.00 1.73
563 564 9.146984 CATTCACAAATCACAAAGCATCTAATT 57.853 29.630 0.00 0.00 0.00 1.40
564 565 9.715121 ATTCACAAATCACAAAGCATCTAATTT 57.285 25.926 0.00 0.00 0.00 1.82
565 566 8.746922 TCACAAATCACAAAGCATCTAATTTC 57.253 30.769 0.00 0.00 0.00 2.17
566 567 8.579006 TCACAAATCACAAAGCATCTAATTTCT 58.421 29.630 0.00 0.00 0.00 2.52
567 568 9.199982 CACAAATCACAAAGCATCTAATTTCTT 57.800 29.630 0.00 0.00 0.00 2.52
568 569 9.415544 ACAAATCACAAAGCATCTAATTTCTTC 57.584 29.630 0.00 0.00 0.00 2.87
569 570 8.866956 CAAATCACAAAGCATCTAATTTCTTCC 58.133 33.333 0.00 0.00 0.00 3.46
570 571 6.515272 TCACAAAGCATCTAATTTCTTCCC 57.485 37.500 0.00 0.00 0.00 3.97
571 572 5.418840 TCACAAAGCATCTAATTTCTTCCCC 59.581 40.000 0.00 0.00 0.00 4.81
572 573 4.711846 ACAAAGCATCTAATTTCTTCCCCC 59.288 41.667 0.00 0.00 0.00 5.40
594 595 2.928334 CTGATTTCAGGTGGGGATGAG 58.072 52.381 0.00 0.00 40.20 2.90
595 596 2.240667 CTGATTTCAGGTGGGGATGAGT 59.759 50.000 0.00 0.00 40.20 3.41
596 597 2.239654 TGATTTCAGGTGGGGATGAGTC 59.760 50.000 0.00 0.00 0.00 3.36
597 598 1.741028 TTTCAGGTGGGGATGAGTCA 58.259 50.000 0.00 0.00 0.00 3.41
598 599 0.984230 TTCAGGTGGGGATGAGTCAC 59.016 55.000 0.00 0.00 0.00 3.67
599 600 0.178906 TCAGGTGGGGATGAGTCACA 60.179 55.000 0.00 0.00 33.45 3.58
600 601 0.036010 CAGGTGGGGATGAGTCACAC 60.036 60.000 0.00 0.00 34.76 3.82
601 602 1.201429 AGGTGGGGATGAGTCACACC 61.201 60.000 18.50 18.50 46.18 4.16
602 603 1.201429 GGTGGGGATGAGTCACACCT 61.201 60.000 18.75 0.00 44.23 4.00
603 604 0.036010 GTGGGGATGAGTCACACCTG 60.036 60.000 15.03 0.00 31.48 4.00
604 605 1.078143 GGGGATGAGTCACACCTGC 60.078 63.158 15.03 0.00 0.00 4.85
605 606 1.557269 GGGGATGAGTCACACCTGCT 61.557 60.000 15.03 0.00 0.00 4.24
606 607 1.195115 GGGATGAGTCACACCTGCTA 58.805 55.000 15.03 0.00 0.00 3.49
607 608 1.555075 GGGATGAGTCACACCTGCTAA 59.445 52.381 15.03 0.00 0.00 3.09
608 609 2.622436 GGATGAGTCACACCTGCTAAC 58.378 52.381 0.00 0.00 0.00 2.34
609 610 2.622436 GATGAGTCACACCTGCTAACC 58.378 52.381 0.00 0.00 0.00 2.85
610 611 0.685097 TGAGTCACACCTGCTAACCC 59.315 55.000 0.00 0.00 0.00 4.11
611 612 0.389948 GAGTCACACCTGCTAACCCG 60.390 60.000 0.00 0.00 0.00 5.28
612 613 1.119574 AGTCACACCTGCTAACCCGT 61.120 55.000 0.00 0.00 0.00 5.28
613 614 0.949105 GTCACACCTGCTAACCCGTG 60.949 60.000 0.00 0.00 0.00 4.94
614 615 1.116536 TCACACCTGCTAACCCGTGA 61.117 55.000 0.00 0.00 0.00 4.35
615 616 0.250124 CACACCTGCTAACCCGTGAA 60.250 55.000 0.00 0.00 0.00 3.18
616 617 0.470766 ACACCTGCTAACCCGTGAAA 59.529 50.000 0.00 0.00 0.00 2.69
617 618 0.872388 CACCTGCTAACCCGTGAAAC 59.128 55.000 0.00 0.00 0.00 2.78
618 619 0.250597 ACCTGCTAACCCGTGAAACC 60.251 55.000 0.00 0.00 0.00 3.27
619 620 0.036306 CCTGCTAACCCGTGAAACCT 59.964 55.000 0.00 0.00 0.00 3.50
620 621 1.156736 CTGCTAACCCGTGAAACCTG 58.843 55.000 0.00 0.00 0.00 4.00
621 622 0.759959 TGCTAACCCGTGAAACCTGA 59.240 50.000 0.00 0.00 0.00 3.86
622 623 1.349688 TGCTAACCCGTGAAACCTGAT 59.650 47.619 0.00 0.00 0.00 2.90
623 624 2.007608 GCTAACCCGTGAAACCTGATC 58.992 52.381 0.00 0.00 0.00 2.92
624 625 2.354805 GCTAACCCGTGAAACCTGATCT 60.355 50.000 0.00 0.00 0.00 2.75
625 626 2.474410 AACCCGTGAAACCTGATCTC 57.526 50.000 0.00 0.00 0.00 2.75
626 627 1.348064 ACCCGTGAAACCTGATCTCA 58.652 50.000 0.00 0.00 0.00 3.27
627 628 1.909302 ACCCGTGAAACCTGATCTCAT 59.091 47.619 0.00 0.00 0.00 2.90
628 629 3.104512 ACCCGTGAAACCTGATCTCATA 58.895 45.455 0.00 0.00 0.00 2.15
629 630 3.517901 ACCCGTGAAACCTGATCTCATAA 59.482 43.478 0.00 0.00 0.00 1.90
630 631 4.019681 ACCCGTGAAACCTGATCTCATAAA 60.020 41.667 0.00 0.00 0.00 1.40
631 632 4.941263 CCCGTGAAACCTGATCTCATAAAA 59.059 41.667 0.00 0.00 0.00 1.52
632 633 5.590259 CCCGTGAAACCTGATCTCATAAAAT 59.410 40.000 0.00 0.00 0.00 1.82
633 634 6.095440 CCCGTGAAACCTGATCTCATAAAATT 59.905 38.462 0.00 0.00 0.00 1.82
634 635 7.189512 CCGTGAAACCTGATCTCATAAAATTC 58.810 38.462 0.00 0.00 0.00 2.17
635 636 7.066284 CCGTGAAACCTGATCTCATAAAATTCT 59.934 37.037 0.00 0.00 0.00 2.40
636 637 8.454106 CGTGAAACCTGATCTCATAAAATTCTT 58.546 33.333 0.00 0.00 0.00 2.52
641 642 7.989826 ACCTGATCTCATAAAATTCTTTTCCG 58.010 34.615 0.00 0.00 34.19 4.30
642 643 7.611855 ACCTGATCTCATAAAATTCTTTTCCGT 59.388 33.333 0.00 0.00 34.19 4.69
643 644 8.125448 CCTGATCTCATAAAATTCTTTTCCGTC 58.875 37.037 0.00 0.00 34.19 4.79
644 645 7.985476 TGATCTCATAAAATTCTTTTCCGTCC 58.015 34.615 0.00 0.00 34.19 4.79
645 646 7.829211 TGATCTCATAAAATTCTTTTCCGTCCT 59.171 33.333 0.00 0.00 34.19 3.85
646 647 9.326413 GATCTCATAAAATTCTTTTCCGTCCTA 57.674 33.333 0.00 0.00 34.19 2.94
647 648 8.488651 TCTCATAAAATTCTTTTCCGTCCTAC 57.511 34.615 0.00 0.00 34.19 3.18
648 649 8.098286 TCTCATAAAATTCTTTTCCGTCCTACA 58.902 33.333 0.00 0.00 34.19 2.74
649 650 8.036273 TCATAAAATTCTTTTCCGTCCTACAC 57.964 34.615 0.00 0.00 34.19 2.90
650 651 7.662258 TCATAAAATTCTTTTCCGTCCTACACA 59.338 33.333 0.00 0.00 34.19 3.72
651 652 6.702716 AAAATTCTTTTCCGTCCTACACAA 57.297 33.333 0.00 0.00 0.00 3.33
652 653 6.702716 AAATTCTTTTCCGTCCTACACAAA 57.297 33.333 0.00 0.00 0.00 2.83
653 654 5.684550 ATTCTTTTCCGTCCTACACAAAC 57.315 39.130 0.00 0.00 0.00 2.93
654 655 3.469739 TCTTTTCCGTCCTACACAAACC 58.530 45.455 0.00 0.00 0.00 3.27
655 656 2.259266 TTTCCGTCCTACACAAACCC 57.741 50.000 0.00 0.00 0.00 4.11
656 657 0.033781 TTCCGTCCTACACAAACCCG 59.966 55.000 0.00 0.00 0.00 5.28
657 658 1.114722 TCCGTCCTACACAAACCCGT 61.115 55.000 0.00 0.00 0.00 5.28
658 659 0.602562 CCGTCCTACACAAACCCGTA 59.397 55.000 0.00 0.00 0.00 4.02
659 660 1.669795 CCGTCCTACACAAACCCGTAC 60.670 57.143 0.00 0.00 0.00 3.67
660 661 1.270550 CGTCCTACACAAACCCGTACT 59.729 52.381 0.00 0.00 0.00 2.73
661 662 2.669391 CGTCCTACACAAACCCGTACTC 60.669 54.545 0.00 0.00 0.00 2.59
810 1315 4.573900 AGCTGAACTAGATTTGTGGTGAG 58.426 43.478 0.00 0.00 0.00 3.51
839 1344 0.320421 TTCCCGTGCTTGTGAGTAGC 60.320 55.000 0.00 0.00 39.10 3.58
840 1345 1.005037 CCCGTGCTTGTGAGTAGCA 60.005 57.895 0.00 0.00 45.78 3.49
866 1371 0.482446 AATCCCAGCAACTCCCAACA 59.518 50.000 0.00 0.00 0.00 3.33
1065 4490 2.997897 GCCCTCCTCGTGTCCACT 60.998 66.667 0.00 0.00 0.00 4.00
1149 4574 1.823169 TAGTCACCTTCACCACCGCC 61.823 60.000 0.00 0.00 0.00 6.13
1549 4980 2.011617 GCTATTGGCCATCCCTGGGT 62.012 60.000 6.09 0.00 43.36 4.51
1631 5062 1.299773 GGCGAGAGATGCTCTTCGG 60.300 63.158 13.78 3.87 41.35 4.30
1639 5070 0.038709 GATGCTCTTCGGGGATCTCG 60.039 60.000 0.00 0.00 0.00 4.04
1643 5074 4.286320 CTTCGGGGATCTCGGCGG 62.286 72.222 7.21 0.00 0.00 6.13
1676 5107 1.337074 GGTATCGTGGGTGTTCGTCAA 60.337 52.381 0.00 0.00 0.00 3.18
1692 5123 0.039437 TCAACACCTTCGACGAGCTC 60.039 55.000 2.73 2.73 0.00 4.09
1731 5162 2.048222 CTTCGCGAGCACCTTCCA 60.048 61.111 9.59 0.00 0.00 3.53
1756 5187 2.415010 CAGTCGGCCCTCTCATCG 59.585 66.667 0.00 0.00 0.00 3.84
1780 5220 0.249911 GGAAATCGATGGGTCCTCCG 60.250 60.000 13.31 0.00 38.76 4.63
1781 5221 0.750850 GAAATCGATGGGTCCTCCGA 59.249 55.000 0.00 6.73 38.76 4.55
1782 5222 1.344763 GAAATCGATGGGTCCTCCGAT 59.655 52.381 0.00 9.83 42.66 4.18
1783 5223 0.681733 AATCGATGGGTCCTCCGATG 59.318 55.000 0.00 0.00 40.96 3.84
1784 5224 0.178961 ATCGATGGGTCCTCCGATGA 60.179 55.000 0.00 0.00 39.84 2.92
1785 5225 0.823769 TCGATGGGTCCTCCGATGAG 60.824 60.000 0.00 0.00 38.76 2.90
2017 5457 2.180131 CTTGTGCGACAGAGGCAAGC 62.180 60.000 0.00 0.00 42.92 4.01
2033 5473 4.980805 GCTCGTCCCGTGGTGCAA 62.981 66.667 0.00 0.00 0.00 4.08
2103 5543 1.218316 CGGCTGGAACTCTACCACC 59.782 63.158 0.00 0.00 33.57 4.61
2108 5548 0.613853 TGGAACTCTACCACCGAGGG 60.614 60.000 0.00 0.00 43.89 4.30
2175 5615 2.414559 CCAGAGCATCAACGCGAAATTT 60.415 45.455 15.93 0.00 37.82 1.82
2230 5670 2.281208 CGCCGGTGACAAGGGAAA 60.281 61.111 10.20 0.00 0.00 3.13
2387 5827 6.317391 GCTTTTGCTGACCAGATAAAGTAGAT 59.683 38.462 17.46 0.00 43.35 1.98
2407 5847 2.680913 CCAAAGGGAGCGTGCTTCG 61.681 63.158 0.00 0.00 38.48 3.79
2426 5866 1.544691 CGTGTGCACTAGTACTCCCTT 59.455 52.381 19.41 0.00 0.00 3.95
2430 5870 3.447586 TGTGCACTAGTACTCCCTTCATC 59.552 47.826 19.41 0.00 0.00 2.92
2431 5871 3.031736 TGCACTAGTACTCCCTTCATCC 58.968 50.000 0.00 0.00 0.00 3.51
2432 5872 3.301274 GCACTAGTACTCCCTTCATCCT 58.699 50.000 0.00 0.00 0.00 3.24
2437 5877 7.419172 GCACTAGTACTCCCTTCATCCTAAAAT 60.419 40.741 0.00 0.00 0.00 1.82
2438 5878 9.144298 CACTAGTACTCCCTTCATCCTAAAATA 57.856 37.037 0.00 0.00 0.00 1.40
2442 5882 9.853177 AGTACTCCCTTCATCCTAAAATAAATG 57.147 33.333 0.00 0.00 0.00 2.32
2443 5883 9.628500 GTACTCCCTTCATCCTAAAATAAATGT 57.372 33.333 0.00 0.00 0.00 2.71
2444 5884 8.753497 ACTCCCTTCATCCTAAAATAAATGTC 57.247 34.615 0.00 0.00 0.00 3.06
2445 5885 8.336235 ACTCCCTTCATCCTAAAATAAATGTCA 58.664 33.333 0.00 0.00 0.00 3.58
2446 5886 9.359653 CTCCCTTCATCCTAAAATAAATGTCAT 57.640 33.333 0.00 0.00 0.00 3.06
2498 5938 9.783256 ACAAAGTTAAGACACTTATTTTGTGAC 57.217 29.630 20.39 6.55 35.87 3.67
2499 5939 8.943925 CAAAGTTAAGACACTTATTTTGTGACG 58.056 33.333 0.84 0.00 35.87 4.35
2500 5940 7.186021 AGTTAAGACACTTATTTTGTGACGG 57.814 36.000 0.00 0.00 38.65 4.79
2502 5942 7.496591 AGTTAAGACACTTATTTTGTGACGGAA 59.503 33.333 0.00 0.00 38.65 4.30
2503 5943 6.877611 AAGACACTTATTTTGTGACGGAAT 57.122 33.333 0.00 0.00 38.65 3.01
2504 5944 7.972832 AAGACACTTATTTTGTGACGGAATA 57.027 32.000 0.00 0.00 38.65 1.75
2509 5949 9.444600 ACACTTATTTTGTGACGGAATAAGTAT 57.555 29.630 23.49 16.28 46.65 2.12
2541 5981 7.615582 TCTTCATTGTCTTTGCTATTAGTGG 57.384 36.000 0.00 0.00 0.00 4.00
2550 5990 1.134818 TGCTATTAGTGGAGTGTGCCG 60.135 52.381 0.00 0.00 0.00 5.69
2578 6018 8.470002 CATCCTCTCGTGATGGTCATTATTATA 58.530 37.037 0.00 0.00 36.74 0.98
2588 6028 9.066892 TGATGGTCATTATTATAGCTTTTCACC 57.933 33.333 0.00 0.00 0.00 4.02
2589 6029 7.490962 TGGTCATTATTATAGCTTTTCACCG 57.509 36.000 0.00 0.00 0.00 4.94
2793 6233 1.377725 CTGCCGTCCTTGAGCCAAT 60.378 57.895 0.00 0.00 0.00 3.16
3169 6724 4.735132 CGGCGGCAAACTCCTCGA 62.735 66.667 10.53 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.921408 ACTCTTGTTGTTTTTAAACGCACAA 59.079 32.000 16.02 16.02 41.74 3.33
2 3 5.462405 ACTCTTGTTGTTTTTAAACGCACA 58.538 33.333 6.24 6.24 41.74 4.57
3 4 7.495339 TTACTCTTGTTGTTTTTAAACGCAC 57.505 32.000 1.35 1.85 41.74 5.34
4 5 8.426251 GTTTTACTCTTGTTGTTTTTAAACGCA 58.574 29.630 1.35 0.85 41.74 5.24
5 6 8.426251 TGTTTTACTCTTGTTGTTTTTAAACGC 58.574 29.630 1.35 0.00 41.74 4.84
14 15 9.783256 GAAGTGTATTGTTTTACTCTTGTTGTT 57.217 29.630 4.27 0.00 36.53 2.83
15 16 8.120465 CGAAGTGTATTGTTTTACTCTTGTTGT 58.880 33.333 4.27 0.00 36.53 3.32
16 17 8.120465 ACGAAGTGTATTGTTTTACTCTTGTTG 58.880 33.333 0.00 0.00 42.51 3.33
17 18 8.205131 ACGAAGTGTATTGTTTTACTCTTGTT 57.795 30.769 0.00 0.00 42.51 2.83
18 19 7.781548 ACGAAGTGTATTGTTTTACTCTTGT 57.218 32.000 0.00 1.95 42.51 3.16
19 20 8.943925 CAAACGAAGTGTATTGTTTTACTCTTG 58.056 33.333 0.00 1.51 45.00 3.02
20 21 8.885722 TCAAACGAAGTGTATTGTTTTACTCTT 58.114 29.630 0.00 0.00 45.00 2.85
21 22 8.428186 TCAAACGAAGTGTATTGTTTTACTCT 57.572 30.769 0.00 0.00 45.00 3.24
22 23 9.155053 CTTCAAACGAAGTGTATTGTTTTACTC 57.845 33.333 0.00 0.00 45.00 2.59
23 24 8.126700 CCTTCAAACGAAGTGTATTGTTTTACT 58.873 33.333 0.00 0.00 45.00 2.24
24 25 7.911727 ACCTTCAAACGAAGTGTATTGTTTTAC 59.088 33.333 0.00 0.00 45.00 2.01
25 26 7.911205 CACCTTCAAACGAAGTGTATTGTTTTA 59.089 33.333 0.00 0.00 45.00 1.52
26 27 6.750039 CACCTTCAAACGAAGTGTATTGTTTT 59.250 34.615 0.00 0.00 45.00 2.43
27 28 6.094325 TCACCTTCAAACGAAGTGTATTGTTT 59.906 34.615 0.00 0.00 45.00 2.83
28 29 5.587043 TCACCTTCAAACGAAGTGTATTGTT 59.413 36.000 0.00 0.00 45.00 2.83
29 30 5.120399 TCACCTTCAAACGAAGTGTATTGT 58.880 37.500 0.00 0.00 45.00 2.71
30 31 5.666969 TCACCTTCAAACGAAGTGTATTG 57.333 39.130 0.00 0.00 45.00 1.90
31 32 4.213482 GCTCACCTTCAAACGAAGTGTATT 59.787 41.667 0.00 0.00 45.00 1.89
32 33 3.746492 GCTCACCTTCAAACGAAGTGTAT 59.254 43.478 0.00 0.00 45.00 2.29
33 34 3.128349 GCTCACCTTCAAACGAAGTGTA 58.872 45.455 0.00 0.00 45.00 2.90
34 35 1.940613 GCTCACCTTCAAACGAAGTGT 59.059 47.619 0.00 0.00 45.00 3.55
35 36 2.032549 CAGCTCACCTTCAAACGAAGTG 60.033 50.000 0.00 0.00 45.00 3.16
37 38 2.213499 ACAGCTCACCTTCAAACGAAG 58.787 47.619 0.00 0.00 39.77 3.79
38 39 2.210116 GACAGCTCACCTTCAAACGAA 58.790 47.619 0.00 0.00 0.00 3.85
39 40 1.138069 TGACAGCTCACCTTCAAACGA 59.862 47.619 0.00 0.00 0.00 3.85
40 41 1.581934 TGACAGCTCACCTTCAAACG 58.418 50.000 0.00 0.00 0.00 3.60
41 42 4.293415 CAAATGACAGCTCACCTTCAAAC 58.707 43.478 0.00 0.00 0.00 2.93
42 43 3.318839 CCAAATGACAGCTCACCTTCAAA 59.681 43.478 0.00 0.00 0.00 2.69
43 44 2.886523 CCAAATGACAGCTCACCTTCAA 59.113 45.455 0.00 0.00 0.00 2.69
44 45 2.106338 TCCAAATGACAGCTCACCTTCA 59.894 45.455 0.00 0.00 0.00 3.02
45 46 2.783135 TCCAAATGACAGCTCACCTTC 58.217 47.619 0.00 0.00 0.00 3.46
46 47 2.957402 TCCAAATGACAGCTCACCTT 57.043 45.000 0.00 0.00 0.00 3.50
47 48 3.350833 GAATCCAAATGACAGCTCACCT 58.649 45.455 0.00 0.00 0.00 4.00
48 49 2.096496 CGAATCCAAATGACAGCTCACC 59.904 50.000 0.00 0.00 0.00 4.02
49 50 3.002791 TCGAATCCAAATGACAGCTCAC 58.997 45.455 0.00 0.00 0.00 3.51
50 51 3.055891 TCTCGAATCCAAATGACAGCTCA 60.056 43.478 0.00 0.00 0.00 4.26
51 52 3.525537 TCTCGAATCCAAATGACAGCTC 58.474 45.455 0.00 0.00 0.00 4.09
52 53 3.055530 ACTCTCGAATCCAAATGACAGCT 60.056 43.478 0.00 0.00 0.00 4.24
53 54 3.265791 ACTCTCGAATCCAAATGACAGC 58.734 45.455 0.00 0.00 0.00 4.40
54 55 4.753233 AGACTCTCGAATCCAAATGACAG 58.247 43.478 0.00 0.00 0.00 3.51
55 56 4.808414 AGACTCTCGAATCCAAATGACA 57.192 40.909 0.00 0.00 0.00 3.58
56 57 6.507900 TCATAGACTCTCGAATCCAAATGAC 58.492 40.000 0.00 0.00 0.00 3.06
57 58 6.715347 TCATAGACTCTCGAATCCAAATGA 57.285 37.500 0.00 0.00 0.00 2.57
58 59 6.927936 ACATCATAGACTCTCGAATCCAAATG 59.072 38.462 0.00 0.00 0.00 2.32
59 60 7.060383 ACATCATAGACTCTCGAATCCAAAT 57.940 36.000 0.00 0.00 0.00 2.32
60 61 6.471233 ACATCATAGACTCTCGAATCCAAA 57.529 37.500 0.00 0.00 0.00 3.28
61 62 6.773200 AGTACATCATAGACTCTCGAATCCAA 59.227 38.462 0.00 0.00 0.00 3.53
62 63 6.299922 AGTACATCATAGACTCTCGAATCCA 58.700 40.000 0.00 0.00 0.00 3.41
63 64 6.128117 GGAGTACATCATAGACTCTCGAATCC 60.128 46.154 0.00 0.00 39.66 3.01
64 65 6.128117 GGGAGTACATCATAGACTCTCGAATC 60.128 46.154 0.00 0.00 39.66 2.52
65 66 5.708230 GGGAGTACATCATAGACTCTCGAAT 59.292 44.000 0.00 0.00 39.66 3.34
66 67 5.064558 GGGAGTACATCATAGACTCTCGAA 58.935 45.833 0.00 0.00 39.66 3.71
67 68 4.348461 AGGGAGTACATCATAGACTCTCGA 59.652 45.833 0.00 0.00 44.07 4.04
68 69 4.647611 AGGGAGTACATCATAGACTCTCG 58.352 47.826 0.00 0.00 44.07 4.04
69 70 6.303839 AGAAGGGAGTACATCATAGACTCTC 58.696 44.000 0.00 0.00 40.42 3.20
70 71 6.274322 AGAAGGGAGTACATCATAGACTCT 57.726 41.667 0.00 0.00 39.66 3.24
71 72 6.969993 AAGAAGGGAGTACATCATAGACTC 57.030 41.667 0.00 0.00 39.12 3.36
72 73 6.897966 TGAAAGAAGGGAGTACATCATAGACT 59.102 38.462 0.00 0.00 0.00 3.24
73 74 7.068839 TCTGAAAGAAGGGAGTACATCATAGAC 59.931 40.741 0.00 0.00 42.31 2.59
74 75 7.126061 TCTGAAAGAAGGGAGTACATCATAGA 58.874 38.462 0.00 0.00 42.31 1.98
75 76 7.353414 TCTGAAAGAAGGGAGTACATCATAG 57.647 40.000 0.00 0.00 42.31 2.23
91 92 8.651391 TTTACACGACAAGTAATTCTGAAAGA 57.349 30.769 0.00 0.00 44.68 2.52
94 95 9.917129 TCTATTTACACGACAAGTAATTCTGAA 57.083 29.630 0.00 0.00 32.07 3.02
159 160 8.717821 CCGAATTACTTCTCACAAAACTGATAA 58.282 33.333 0.00 0.00 0.00 1.75
160 161 7.333423 CCCGAATTACTTCTCACAAAACTGATA 59.667 37.037 0.00 0.00 0.00 2.15
161 162 6.149474 CCCGAATTACTTCTCACAAAACTGAT 59.851 38.462 0.00 0.00 0.00 2.90
162 163 5.468746 CCCGAATTACTTCTCACAAAACTGA 59.531 40.000 0.00 0.00 0.00 3.41
163 164 5.468746 TCCCGAATTACTTCTCACAAAACTG 59.531 40.000 0.00 0.00 0.00 3.16
164 165 5.469084 GTCCCGAATTACTTCTCACAAAACT 59.531 40.000 0.00 0.00 0.00 2.66
165 166 5.614013 CGTCCCGAATTACTTCTCACAAAAC 60.614 44.000 0.00 0.00 0.00 2.43
166 167 4.449743 CGTCCCGAATTACTTCTCACAAAA 59.550 41.667 0.00 0.00 0.00 2.44
167 168 3.991773 CGTCCCGAATTACTTCTCACAAA 59.008 43.478 0.00 0.00 0.00 2.83
168 169 3.581755 CGTCCCGAATTACTTCTCACAA 58.418 45.455 0.00 0.00 0.00 3.33
169 170 2.094390 CCGTCCCGAATTACTTCTCACA 60.094 50.000 0.00 0.00 0.00 3.58
170 171 2.165030 TCCGTCCCGAATTACTTCTCAC 59.835 50.000 0.00 0.00 0.00 3.51
171 172 2.426024 CTCCGTCCCGAATTACTTCTCA 59.574 50.000 0.00 0.00 0.00 3.27
172 173 2.426381 ACTCCGTCCCGAATTACTTCTC 59.574 50.000 0.00 0.00 0.00 2.87
173 174 2.165845 CACTCCGTCCCGAATTACTTCT 59.834 50.000 0.00 0.00 0.00 2.85
174 175 2.165030 TCACTCCGTCCCGAATTACTTC 59.835 50.000 0.00 0.00 0.00 3.01
175 176 2.165845 CTCACTCCGTCCCGAATTACTT 59.834 50.000 0.00 0.00 0.00 2.24
176 177 1.749634 CTCACTCCGTCCCGAATTACT 59.250 52.381 0.00 0.00 0.00 2.24
177 178 1.475682 ACTCACTCCGTCCCGAATTAC 59.524 52.381 0.00 0.00 0.00 1.89
178 179 1.843368 ACTCACTCCGTCCCGAATTA 58.157 50.000 0.00 0.00 0.00 1.40
179 180 1.843368 TACTCACTCCGTCCCGAATT 58.157 50.000 0.00 0.00 0.00 2.17
180 181 1.681793 CATACTCACTCCGTCCCGAAT 59.318 52.381 0.00 0.00 0.00 3.34
181 182 1.100510 CATACTCACTCCGTCCCGAA 58.899 55.000 0.00 0.00 0.00 4.30
182 183 0.253894 TCATACTCACTCCGTCCCGA 59.746 55.000 0.00 0.00 0.00 5.14
183 184 1.001268 CATCATACTCACTCCGTCCCG 60.001 57.143 0.00 0.00 0.00 5.14
184 185 1.341531 CCATCATACTCACTCCGTCCC 59.658 57.143 0.00 0.00 0.00 4.46
185 186 2.032620 ACCATCATACTCACTCCGTCC 58.967 52.381 0.00 0.00 0.00 4.79
186 187 3.303857 CGTACCATCATACTCACTCCGTC 60.304 52.174 0.00 0.00 0.00 4.79
187 188 2.617308 CGTACCATCATACTCACTCCGT 59.383 50.000 0.00 0.00 0.00 4.69
188 189 2.617308 ACGTACCATCATACTCACTCCG 59.383 50.000 0.00 0.00 0.00 4.63
189 190 3.795826 GCACGTACCATCATACTCACTCC 60.796 52.174 0.00 0.00 0.00 3.85
190 191 3.181490 TGCACGTACCATCATACTCACTC 60.181 47.826 0.00 0.00 0.00 3.51
191 192 2.758423 TGCACGTACCATCATACTCACT 59.242 45.455 0.00 0.00 0.00 3.41
192 193 3.159353 TGCACGTACCATCATACTCAC 57.841 47.619 0.00 0.00 0.00 3.51
193 194 3.550030 CGATGCACGTACCATCATACTCA 60.550 47.826 21.24 0.00 39.17 3.41
194 195 2.980476 CGATGCACGTACCATCATACTC 59.020 50.000 21.24 3.09 39.17 2.59
195 196 2.621526 TCGATGCACGTACCATCATACT 59.378 45.455 21.24 0.00 43.13 2.12
196 197 3.007979 TCGATGCACGTACCATCATAC 57.992 47.619 21.24 3.27 43.13 2.39
197 198 3.254657 TGATCGATGCACGTACCATCATA 59.745 43.478 21.24 12.78 43.13 2.15
198 199 2.035832 TGATCGATGCACGTACCATCAT 59.964 45.455 21.24 15.43 43.13 2.45
199 200 1.407258 TGATCGATGCACGTACCATCA 59.593 47.619 21.24 12.61 43.13 3.07
200 201 2.054363 CTGATCGATGCACGTACCATC 58.946 52.381 0.54 14.95 43.13 3.51
201 202 1.409064 ACTGATCGATGCACGTACCAT 59.591 47.619 0.54 0.95 43.13 3.55
202 203 0.815095 ACTGATCGATGCACGTACCA 59.185 50.000 0.54 0.00 43.13 3.25
203 204 1.852895 GAACTGATCGATGCACGTACC 59.147 52.381 0.54 0.00 43.13 3.34
204 205 1.852895 GGAACTGATCGATGCACGTAC 59.147 52.381 0.54 0.00 43.13 3.67
205 206 1.202371 GGGAACTGATCGATGCACGTA 60.202 52.381 0.54 0.00 43.13 3.57
206 207 0.460284 GGGAACTGATCGATGCACGT 60.460 55.000 0.54 0.00 43.13 4.49
207 208 0.179100 AGGGAACTGATCGATGCACG 60.179 55.000 0.54 0.00 41.13 5.34
208 209 2.029838 AAGGGAACTGATCGATGCAC 57.970 50.000 0.54 0.00 42.68 4.57
209 210 2.290260 ACAAAGGGAACTGATCGATGCA 60.290 45.455 0.54 0.00 42.68 3.96
210 211 2.359900 ACAAAGGGAACTGATCGATGC 58.640 47.619 0.54 0.00 42.68 3.91
211 212 5.156355 CAAAACAAAGGGAACTGATCGATG 58.844 41.667 0.54 0.00 42.68 3.84
212 213 4.827284 ACAAAACAAAGGGAACTGATCGAT 59.173 37.500 0.00 0.00 42.68 3.59
213 214 4.204012 ACAAAACAAAGGGAACTGATCGA 58.796 39.130 0.00 0.00 42.68 3.59
214 215 4.568152 ACAAAACAAAGGGAACTGATCG 57.432 40.909 0.00 0.00 42.68 3.69
215 216 6.257849 GGAAAACAAAACAAAGGGAACTGATC 59.742 38.462 0.00 0.00 42.68 2.92
216 217 6.112734 GGAAAACAAAACAAAGGGAACTGAT 58.887 36.000 0.00 0.00 42.68 2.90
217 218 5.483811 GGAAAACAAAACAAAGGGAACTGA 58.516 37.500 0.00 0.00 42.68 3.41
218 219 4.328712 CGGAAAACAAAACAAAGGGAACTG 59.671 41.667 0.00 0.00 42.68 3.16
220 221 3.619483 CCGGAAAACAAAACAAAGGGAAC 59.381 43.478 0.00 0.00 0.00 3.62
221 222 3.369576 CCCGGAAAACAAAACAAAGGGAA 60.370 43.478 0.73 0.00 38.62 3.97
222 223 2.168728 CCCGGAAAACAAAACAAAGGGA 59.831 45.455 0.73 0.00 38.62 4.20
223 224 2.168728 TCCCGGAAAACAAAACAAAGGG 59.831 45.455 0.73 0.00 37.72 3.95
224 225 3.528597 TCCCGGAAAACAAAACAAAGG 57.471 42.857 0.73 0.00 0.00 3.11
225 226 4.506288 GTCATCCCGGAAAACAAAACAAAG 59.494 41.667 0.73 0.00 0.00 2.77
226 227 4.434520 GTCATCCCGGAAAACAAAACAAA 58.565 39.130 0.73 0.00 0.00 2.83
227 228 3.181474 GGTCATCCCGGAAAACAAAACAA 60.181 43.478 0.73 0.00 0.00 2.83
228 229 2.362717 GGTCATCCCGGAAAACAAAACA 59.637 45.455 0.73 0.00 0.00 2.83
229 230 3.021269 GGTCATCCCGGAAAACAAAAC 57.979 47.619 0.73 0.00 0.00 2.43
240 241 6.711172 TCAAGTAATGAACCGGTCATCCCG 62.711 50.000 8.04 2.33 46.80 5.14
241 242 2.943033 CAAGTAATGAACCGGTCATCCC 59.057 50.000 8.04 7.52 46.80 3.85
242 243 3.621715 GTCAAGTAATGAACCGGTCATCC 59.378 47.826 8.04 7.85 46.80 3.51
243 244 4.330074 CAGTCAAGTAATGAACCGGTCATC 59.670 45.833 8.04 2.68 46.80 2.92
245 246 3.070446 ACAGTCAAGTAATGAACCGGTCA 59.930 43.478 8.04 8.53 40.50 4.02
246 247 3.660865 ACAGTCAAGTAATGAACCGGTC 58.339 45.455 8.04 1.72 40.50 4.79
247 248 3.764237 ACAGTCAAGTAATGAACCGGT 57.236 42.857 0.00 0.00 40.50 5.28
248 249 6.737254 ATTTACAGTCAAGTAATGAACCGG 57.263 37.500 0.00 0.00 40.50 5.28
257 258 9.142515 CGTGGTACATTAATTTACAGTCAAGTA 57.857 33.333 12.58 0.00 44.52 2.24
258 259 7.658575 ACGTGGTACATTAATTTACAGTCAAGT 59.341 33.333 12.58 7.71 44.52 3.16
259 260 8.025243 ACGTGGTACATTAATTTACAGTCAAG 57.975 34.615 12.58 7.23 44.52 3.02
260 261 7.966246 ACGTGGTACATTAATTTACAGTCAA 57.034 32.000 12.58 0.00 44.52 3.18
261 262 7.441760 ACAACGTGGTACATTAATTTACAGTCA 59.558 33.333 12.58 1.02 44.52 3.41
262 263 7.799784 ACAACGTGGTACATTAATTTACAGTC 58.200 34.615 12.58 3.31 44.52 3.51
263 264 7.733402 ACAACGTGGTACATTAATTTACAGT 57.267 32.000 12.58 7.28 44.52 3.55
273 274 9.090692 GACAAACTATATACAACGTGGTACATT 57.909 33.333 4.55 0.00 44.52 2.71
274 275 8.472413 AGACAAACTATATACAACGTGGTACAT 58.528 33.333 4.55 1.36 44.52 2.29
275 276 7.829725 AGACAAACTATATACAACGTGGTACA 58.170 34.615 4.55 0.00 0.00 2.90
276 277 9.787532 TTAGACAAACTATATACAACGTGGTAC 57.212 33.333 4.55 0.00 0.00 3.34
278 279 9.880157 AATTAGACAAACTATATACAACGTGGT 57.120 29.630 0.00 0.00 0.00 4.16
307 308 8.333908 GTGACATGCTTAGAAAACATCTAGATG 58.666 37.037 27.63 27.63 41.59 2.90
308 309 8.043113 TGTGACATGCTTAGAAAACATCTAGAT 58.957 33.333 0.00 0.00 41.59 1.98
309 310 7.386059 TGTGACATGCTTAGAAAACATCTAGA 58.614 34.615 0.00 0.00 41.59 2.43
310 311 7.601073 TGTGACATGCTTAGAAAACATCTAG 57.399 36.000 0.00 0.00 41.59 2.43
311 312 8.043113 AGATGTGACATGCTTAGAAAACATCTA 58.957 33.333 1.23 0.00 46.74 1.98
312 313 6.883217 AGATGTGACATGCTTAGAAAACATCT 59.117 34.615 1.23 8.71 44.92 2.90
313 314 7.081526 AGATGTGACATGCTTAGAAAACATC 57.918 36.000 1.23 0.00 41.77 3.06
314 315 8.565896 TTAGATGTGACATGCTTAGAAAACAT 57.434 30.769 1.23 0.00 0.00 2.71
315 316 7.977789 TTAGATGTGACATGCTTAGAAAACA 57.022 32.000 1.23 0.00 0.00 2.83
316 317 8.507249 AGTTTAGATGTGACATGCTTAGAAAAC 58.493 33.333 1.23 7.63 0.00 2.43
317 318 8.621532 AGTTTAGATGTGACATGCTTAGAAAA 57.378 30.769 1.23 0.00 0.00 2.29
318 319 8.621532 AAGTTTAGATGTGACATGCTTAGAAA 57.378 30.769 1.23 0.00 0.00 2.52
319 320 8.621532 AAAGTTTAGATGTGACATGCTTAGAA 57.378 30.769 1.23 0.00 0.00 2.10
320 321 8.621532 AAAAGTTTAGATGTGACATGCTTAGA 57.378 30.769 1.23 0.00 0.00 2.10
321 322 9.760660 GTAAAAGTTTAGATGTGACATGCTTAG 57.239 33.333 1.23 0.00 0.00 2.18
322 323 9.278978 TGTAAAAGTTTAGATGTGACATGCTTA 57.721 29.630 1.23 0.00 0.00 3.09
323 324 8.165239 TGTAAAAGTTTAGATGTGACATGCTT 57.835 30.769 1.23 0.00 0.00 3.91
324 325 7.744087 TGTAAAAGTTTAGATGTGACATGCT 57.256 32.000 1.23 2.84 0.00 3.79
325 326 8.795786 TTTGTAAAAGTTTAGATGTGACATGC 57.204 30.769 1.23 0.00 0.00 4.06
330 331 9.601971 GCGTTATTTGTAAAAGTTTAGATGTGA 57.398 29.630 0.00 0.00 0.00 3.58
331 332 9.388346 TGCGTTATTTGTAAAAGTTTAGATGTG 57.612 29.630 0.00 0.00 0.00 3.21
332 333 9.953697 TTGCGTTATTTGTAAAAGTTTAGATGT 57.046 25.926 0.00 0.00 0.00 3.06
334 335 9.953697 TGTTGCGTTATTTGTAAAAGTTTAGAT 57.046 25.926 0.00 0.00 0.00 1.98
335 336 9.784680 TTGTTGCGTTATTTGTAAAAGTTTAGA 57.215 25.926 0.00 0.00 0.00 2.10
336 337 9.823979 GTTGTTGCGTTATTTGTAAAAGTTTAG 57.176 29.630 0.00 0.00 0.00 1.85
337 338 9.350357 TGTTGTTGCGTTATTTGTAAAAGTTTA 57.650 25.926 0.00 0.00 0.00 2.01
338 339 8.240883 TGTTGTTGCGTTATTTGTAAAAGTTT 57.759 26.923 0.00 0.00 0.00 2.66
339 340 7.813852 TGTTGTTGCGTTATTTGTAAAAGTT 57.186 28.000 0.00 0.00 0.00 2.66
340 341 7.009723 CCTTGTTGTTGCGTTATTTGTAAAAGT 59.990 33.333 0.00 0.00 0.00 2.66
341 342 7.221067 TCCTTGTTGTTGCGTTATTTGTAAAAG 59.779 33.333 0.00 0.00 0.00 2.27
342 343 7.033791 TCCTTGTTGTTGCGTTATTTGTAAAA 58.966 30.769 0.00 0.00 0.00 1.52
343 344 6.561614 TCCTTGTTGTTGCGTTATTTGTAAA 58.438 32.000 0.00 0.00 0.00 2.01
344 345 6.132791 TCCTTGTTGTTGCGTTATTTGTAA 57.867 33.333 0.00 0.00 0.00 2.41
345 346 5.752892 TCCTTGTTGTTGCGTTATTTGTA 57.247 34.783 0.00 0.00 0.00 2.41
346 347 4.640789 TCCTTGTTGTTGCGTTATTTGT 57.359 36.364 0.00 0.00 0.00 2.83
347 348 4.800993 TGTTCCTTGTTGTTGCGTTATTTG 59.199 37.500 0.00 0.00 0.00 2.32
348 349 5.000012 TGTTCCTTGTTGTTGCGTTATTT 58.000 34.783 0.00 0.00 0.00 1.40
349 350 4.640789 TGTTCCTTGTTGTTGCGTTATT 57.359 36.364 0.00 0.00 0.00 1.40
350 351 4.640789 TTGTTCCTTGTTGTTGCGTTAT 57.359 36.364 0.00 0.00 0.00 1.89
351 352 4.436242 TTTGTTCCTTGTTGTTGCGTTA 57.564 36.364 0.00 0.00 0.00 3.18
352 353 3.305398 TTTGTTCCTTGTTGTTGCGTT 57.695 38.095 0.00 0.00 0.00 4.84
353 354 3.249917 CTTTTGTTCCTTGTTGTTGCGT 58.750 40.909 0.00 0.00 0.00 5.24
354 355 2.602660 CCTTTTGTTCCTTGTTGTTGCG 59.397 45.455 0.00 0.00 0.00 4.85
355 356 3.855858 TCCTTTTGTTCCTTGTTGTTGC 58.144 40.909 0.00 0.00 0.00 4.17
356 357 5.931724 ACTTTCCTTTTGTTCCTTGTTGTTG 59.068 36.000 0.00 0.00 0.00 3.33
357 358 6.109156 ACTTTCCTTTTGTTCCTTGTTGTT 57.891 33.333 0.00 0.00 0.00 2.83
358 359 5.738619 ACTTTCCTTTTGTTCCTTGTTGT 57.261 34.783 0.00 0.00 0.00 3.32
359 360 5.351189 CCAACTTTCCTTTTGTTCCTTGTTG 59.649 40.000 0.00 0.00 0.00 3.33
360 361 5.487433 CCAACTTTCCTTTTGTTCCTTGTT 58.513 37.500 0.00 0.00 0.00 2.83
361 362 4.081142 CCCAACTTTCCTTTTGTTCCTTGT 60.081 41.667 0.00 0.00 0.00 3.16
362 363 4.161377 TCCCAACTTTCCTTTTGTTCCTTG 59.839 41.667 0.00 0.00 0.00 3.61
363 364 4.161565 GTCCCAACTTTCCTTTTGTTCCTT 59.838 41.667 0.00 0.00 0.00 3.36
364 365 3.704566 GTCCCAACTTTCCTTTTGTTCCT 59.295 43.478 0.00 0.00 0.00 3.36
365 366 3.449377 TGTCCCAACTTTCCTTTTGTTCC 59.551 43.478 0.00 0.00 0.00 3.62
366 367 4.729227 TGTCCCAACTTTCCTTTTGTTC 57.271 40.909 0.00 0.00 0.00 3.18
367 368 5.491323 TTTGTCCCAACTTTCCTTTTGTT 57.509 34.783 0.00 0.00 0.00 2.83
368 369 5.491323 TTTTGTCCCAACTTTCCTTTTGT 57.509 34.783 0.00 0.00 0.00 2.83
396 397 9.607988 CCTAATGTACATTATGTTTGTGGTCTA 57.392 33.333 24.81 3.72 33.29 2.59
397 398 8.107095 ACCTAATGTACATTATGTTTGTGGTCT 58.893 33.333 24.81 6.86 31.17 3.85
398 399 8.276252 ACCTAATGTACATTATGTTTGTGGTC 57.724 34.615 24.81 0.00 31.17 4.02
399 400 8.644374 AACCTAATGTACATTATGTTTGTGGT 57.356 30.769 28.95 24.52 38.24 4.16
470 471 8.631480 AAGACCTGGTCTCGTATAAAATTTTT 57.369 30.769 28.46 5.98 42.59 1.94
471 472 9.901172 ATAAGACCTGGTCTCGTATAAAATTTT 57.099 29.630 28.46 11.36 42.59 1.82
478 479 9.236006 GGTTTATATAAGACCTGGTCTCGTATA 57.764 37.037 28.46 24.48 42.59 1.47
479 480 7.727186 TGGTTTATATAAGACCTGGTCTCGTAT 59.273 37.037 28.46 26.24 42.59 3.06
480 481 7.062322 TGGTTTATATAAGACCTGGTCTCGTA 58.938 38.462 28.46 22.33 42.59 3.43
481 482 5.895534 TGGTTTATATAAGACCTGGTCTCGT 59.104 40.000 28.46 21.05 42.59 4.18
482 483 6.401047 TGGTTTATATAAGACCTGGTCTCG 57.599 41.667 28.46 0.00 42.59 4.04
483 484 6.760291 CCTGGTTTATATAAGACCTGGTCTC 58.240 44.000 28.46 13.64 42.59 3.36
484 485 6.749036 CCTGGTTTATATAAGACCTGGTCT 57.251 41.667 23.49 23.49 45.64 3.85
488 489 7.210873 GTCTCACCTGGTTTATATAAGACCTG 58.789 42.308 19.09 18.16 34.52 4.00
489 490 6.326843 GGTCTCACCTGGTTTATATAAGACCT 59.673 42.308 19.09 5.50 44.34 3.85
490 491 6.464039 GGGTCTCACCTGGTTTATATAAGACC 60.464 46.154 17.47 17.47 46.09 3.85
491 492 6.522946 GGGTCTCACCTGGTTTATATAAGAC 58.477 44.000 0.00 2.27 38.64 3.01
492 493 5.303589 CGGGTCTCACCTGGTTTATATAAGA 59.696 44.000 0.00 0.00 41.01 2.10
493 494 5.539048 CGGGTCTCACCTGGTTTATATAAG 58.461 45.833 0.00 0.00 41.01 1.73
494 495 4.202284 GCGGGTCTCACCTGGTTTATATAA 60.202 45.833 0.00 0.00 44.90 0.98
495 496 3.322828 GCGGGTCTCACCTGGTTTATATA 59.677 47.826 0.00 0.00 44.90 0.86
496 497 2.104281 GCGGGTCTCACCTGGTTTATAT 59.896 50.000 0.00 0.00 44.90 0.86
497 498 1.483415 GCGGGTCTCACCTGGTTTATA 59.517 52.381 0.00 0.00 44.90 0.98
498 499 0.252197 GCGGGTCTCACCTGGTTTAT 59.748 55.000 0.00 0.00 44.90 1.40
499 500 1.675219 GCGGGTCTCACCTGGTTTA 59.325 57.895 0.00 0.00 44.90 2.01
500 501 2.430367 GCGGGTCTCACCTGGTTT 59.570 61.111 0.00 0.00 44.90 3.27
501 502 3.637273 GGCGGGTCTCACCTGGTT 61.637 66.667 0.00 0.00 44.90 3.67
505 506 3.625632 ATCAGGGCGGGTCTCACCT 62.626 63.158 0.00 0.00 38.64 4.00
506 507 3.083997 ATCAGGGCGGGTCTCACC 61.084 66.667 0.00 0.00 37.60 4.02
507 508 2.187946 CATCAGGGCGGGTCTCAC 59.812 66.667 0.00 0.00 0.00 3.51
508 509 2.896677 ATCCATCAGGGCGGGTCTCA 62.897 60.000 0.00 0.00 36.21 3.27
509 510 0.832135 TATCCATCAGGGCGGGTCTC 60.832 60.000 0.00 0.00 36.21 3.36
510 511 0.399949 TTATCCATCAGGGCGGGTCT 60.400 55.000 0.00 0.00 36.21 3.85
511 512 0.250338 GTTATCCATCAGGGCGGGTC 60.250 60.000 0.00 0.00 36.21 4.46
512 513 0.986019 TGTTATCCATCAGGGCGGGT 60.986 55.000 0.00 0.00 36.21 5.28
513 514 0.401738 ATGTTATCCATCAGGGCGGG 59.598 55.000 0.00 0.00 36.21 6.13
514 515 1.202806 ACATGTTATCCATCAGGGCGG 60.203 52.381 0.00 0.00 36.21 6.13
515 516 1.875514 CACATGTTATCCATCAGGGCG 59.124 52.381 0.00 0.00 36.21 6.13
516 517 2.233271 CCACATGTTATCCATCAGGGC 58.767 52.381 0.00 0.00 36.21 5.19
517 518 2.233271 GCCACATGTTATCCATCAGGG 58.767 52.381 0.00 0.00 34.83 4.45
518 519 2.934887 TGCCACATGTTATCCATCAGG 58.065 47.619 0.00 0.00 0.00 3.86
519 520 4.581409 TGAATGCCACATGTTATCCATCAG 59.419 41.667 0.00 0.00 0.00 2.90
520 521 4.338964 GTGAATGCCACATGTTATCCATCA 59.661 41.667 0.00 0.00 45.03 3.07
521 522 4.863491 GTGAATGCCACATGTTATCCATC 58.137 43.478 0.00 0.00 45.03 3.51
522 523 4.924305 GTGAATGCCACATGTTATCCAT 57.076 40.909 0.00 0.00 45.03 3.41
533 534 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
534 535 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
535 536 3.391965 TGCTTTGTGATTTGTGAATGCC 58.608 40.909 0.00 0.00 0.00 4.40
536 537 4.927425 AGATGCTTTGTGATTTGTGAATGC 59.073 37.500 0.00 0.00 0.00 3.56
537 538 8.697846 ATTAGATGCTTTGTGATTTGTGAATG 57.302 30.769 0.00 0.00 0.00 2.67
538 539 9.715121 AAATTAGATGCTTTGTGATTTGTGAAT 57.285 25.926 0.00 0.00 0.00 2.57
539 540 9.195411 GAAATTAGATGCTTTGTGATTTGTGAA 57.805 29.630 0.00 0.00 0.00 3.18
540 541 8.579006 AGAAATTAGATGCTTTGTGATTTGTGA 58.421 29.630 0.00 0.00 0.00 3.58
541 542 8.752766 AGAAATTAGATGCTTTGTGATTTGTG 57.247 30.769 0.00 0.00 0.00 3.33
542 543 9.415544 GAAGAAATTAGATGCTTTGTGATTTGT 57.584 29.630 0.00 0.00 0.00 2.83
543 544 8.866956 GGAAGAAATTAGATGCTTTGTGATTTG 58.133 33.333 0.00 0.00 0.00 2.32
544 545 8.037166 GGGAAGAAATTAGATGCTTTGTGATTT 58.963 33.333 0.00 0.00 0.00 2.17
545 546 7.364144 GGGGAAGAAATTAGATGCTTTGTGATT 60.364 37.037 0.00 0.00 0.00 2.57
546 547 6.097412 GGGGAAGAAATTAGATGCTTTGTGAT 59.903 38.462 0.00 0.00 0.00 3.06
547 548 5.418840 GGGGAAGAAATTAGATGCTTTGTGA 59.581 40.000 0.00 0.00 0.00 3.58
548 549 5.394553 GGGGGAAGAAATTAGATGCTTTGTG 60.395 44.000 0.00 0.00 0.00 3.33
549 550 4.711846 GGGGGAAGAAATTAGATGCTTTGT 59.288 41.667 0.00 0.00 0.00 2.83
550 551 5.268118 GGGGGAAGAAATTAGATGCTTTG 57.732 43.478 0.00 0.00 0.00 2.77
574 575 2.240667 ACTCATCCCCACCTGAAATCAG 59.759 50.000 3.37 3.37 43.40 2.90
575 576 2.239654 GACTCATCCCCACCTGAAATCA 59.760 50.000 0.00 0.00 0.00 2.57
576 577 2.239654 TGACTCATCCCCACCTGAAATC 59.760 50.000 0.00 0.00 0.00 2.17
577 578 2.025887 GTGACTCATCCCCACCTGAAAT 60.026 50.000 0.00 0.00 0.00 2.17
578 579 1.351017 GTGACTCATCCCCACCTGAAA 59.649 52.381 0.00 0.00 0.00 2.69
579 580 0.984230 GTGACTCATCCCCACCTGAA 59.016 55.000 0.00 0.00 0.00 3.02
580 581 0.178906 TGTGACTCATCCCCACCTGA 60.179 55.000 0.00 0.00 0.00 3.86
581 582 0.036010 GTGTGACTCATCCCCACCTG 60.036 60.000 0.00 0.00 0.00 4.00
582 583 1.201429 GGTGTGACTCATCCCCACCT 61.201 60.000 8.62 0.00 40.35 4.00
583 584 1.201429 AGGTGTGACTCATCCCCACC 61.201 60.000 8.02 8.02 42.30 4.61
584 585 0.036010 CAGGTGTGACTCATCCCCAC 60.036 60.000 0.00 0.00 0.00 4.61
585 586 1.841302 GCAGGTGTGACTCATCCCCA 61.841 60.000 0.00 0.00 0.00 4.96
586 587 1.078143 GCAGGTGTGACTCATCCCC 60.078 63.158 0.00 0.00 0.00 4.81
587 588 1.195115 TAGCAGGTGTGACTCATCCC 58.805 55.000 0.00 0.00 0.00 3.85
588 589 2.622436 GTTAGCAGGTGTGACTCATCC 58.378 52.381 0.00 0.00 0.00 3.51
589 590 2.622436 GGTTAGCAGGTGTGACTCATC 58.378 52.381 0.00 0.00 0.00 2.92
590 591 1.279271 GGGTTAGCAGGTGTGACTCAT 59.721 52.381 0.00 0.00 0.00 2.90
591 592 0.685097 GGGTTAGCAGGTGTGACTCA 59.315 55.000 0.00 0.00 0.00 3.41
592 593 0.389948 CGGGTTAGCAGGTGTGACTC 60.390 60.000 0.00 0.00 0.00 3.36
593 594 1.119574 ACGGGTTAGCAGGTGTGACT 61.120 55.000 0.00 0.00 0.00 3.41
594 595 0.949105 CACGGGTTAGCAGGTGTGAC 60.949 60.000 0.00 0.00 0.00 3.67
595 596 1.116536 TCACGGGTTAGCAGGTGTGA 61.117 55.000 5.14 0.00 34.27 3.58
596 597 0.250124 TTCACGGGTTAGCAGGTGTG 60.250 55.000 5.14 0.00 0.00 3.82
597 598 0.470766 TTTCACGGGTTAGCAGGTGT 59.529 50.000 5.14 0.00 0.00 4.16
598 599 0.872388 GTTTCACGGGTTAGCAGGTG 59.128 55.000 0.00 0.00 0.00 4.00
599 600 0.250597 GGTTTCACGGGTTAGCAGGT 60.251 55.000 0.00 0.00 0.00 4.00
600 601 0.036306 AGGTTTCACGGGTTAGCAGG 59.964 55.000 0.00 0.00 0.00 4.85
601 602 1.156736 CAGGTTTCACGGGTTAGCAG 58.843 55.000 0.00 0.00 0.00 4.24
602 603 0.759959 TCAGGTTTCACGGGTTAGCA 59.240 50.000 0.00 0.00 0.00 3.49
603 604 2.007608 GATCAGGTTTCACGGGTTAGC 58.992 52.381 0.00 0.00 0.00 3.09
604 605 3.056107 TGAGATCAGGTTTCACGGGTTAG 60.056 47.826 0.00 0.00 0.00 2.34
605 606 2.901192 TGAGATCAGGTTTCACGGGTTA 59.099 45.455 0.00 0.00 0.00 2.85
606 607 1.697432 TGAGATCAGGTTTCACGGGTT 59.303 47.619 0.00 0.00 0.00 4.11
607 608 1.348064 TGAGATCAGGTTTCACGGGT 58.652 50.000 0.00 0.00 0.00 5.28
608 609 2.698855 ATGAGATCAGGTTTCACGGG 57.301 50.000 0.00 0.00 0.00 5.28
609 610 6.683974 ATTTTATGAGATCAGGTTTCACGG 57.316 37.500 0.00 0.00 0.00 4.94
610 611 7.978982 AGAATTTTATGAGATCAGGTTTCACG 58.021 34.615 0.00 0.00 0.00 4.35
629 630 6.460537 GGTTTGTGTAGGACGGAAAAGAATTT 60.461 38.462 0.00 0.00 42.41 1.82
630 631 5.009310 GGTTTGTGTAGGACGGAAAAGAATT 59.991 40.000 0.00 0.00 0.00 2.17
631 632 4.517832 GGTTTGTGTAGGACGGAAAAGAAT 59.482 41.667 0.00 0.00 0.00 2.40
632 633 3.878699 GGTTTGTGTAGGACGGAAAAGAA 59.121 43.478 0.00 0.00 0.00 2.52
633 634 3.469739 GGTTTGTGTAGGACGGAAAAGA 58.530 45.455 0.00 0.00 0.00 2.52
634 635 2.551032 GGGTTTGTGTAGGACGGAAAAG 59.449 50.000 0.00 0.00 0.00 2.27
635 636 2.574450 GGGTTTGTGTAGGACGGAAAA 58.426 47.619 0.00 0.00 0.00 2.29
636 637 1.540797 CGGGTTTGTGTAGGACGGAAA 60.541 52.381 0.00 0.00 0.00 3.13
637 638 0.033781 CGGGTTTGTGTAGGACGGAA 59.966 55.000 0.00 0.00 0.00 4.30
638 639 1.114722 ACGGGTTTGTGTAGGACGGA 61.115 55.000 0.00 0.00 0.00 4.69
639 640 0.602562 TACGGGTTTGTGTAGGACGG 59.397 55.000 0.00 0.00 0.00 4.79
640 641 1.270550 AGTACGGGTTTGTGTAGGACG 59.729 52.381 0.00 0.00 0.00 4.79
641 642 2.297033 TGAGTACGGGTTTGTGTAGGAC 59.703 50.000 0.00 0.00 0.00 3.85
642 643 2.596346 TGAGTACGGGTTTGTGTAGGA 58.404 47.619 0.00 0.00 0.00 2.94
643 644 3.604875 ATGAGTACGGGTTTGTGTAGG 57.395 47.619 0.00 0.00 0.00 3.18
644 645 5.472148 TGTTATGAGTACGGGTTTGTGTAG 58.528 41.667 0.00 0.00 0.00 2.74
645 646 5.010922 ACTGTTATGAGTACGGGTTTGTGTA 59.989 40.000 0.00 0.00 0.00 2.90
646 647 4.202284 ACTGTTATGAGTACGGGTTTGTGT 60.202 41.667 0.00 0.00 0.00 3.72
647 648 4.312443 ACTGTTATGAGTACGGGTTTGTG 58.688 43.478 0.00 0.00 0.00 3.33
648 649 4.563061 GACTGTTATGAGTACGGGTTTGT 58.437 43.478 0.00 0.00 0.00 2.83
649 650 3.611113 CGACTGTTATGAGTACGGGTTTG 59.389 47.826 0.00 0.00 0.00 2.93
650 651 3.256631 ACGACTGTTATGAGTACGGGTTT 59.743 43.478 0.00 0.00 0.00 3.27
651 652 2.821969 ACGACTGTTATGAGTACGGGTT 59.178 45.455 0.00 0.00 0.00 4.11
652 653 2.440409 ACGACTGTTATGAGTACGGGT 58.560 47.619 0.00 0.00 0.00 5.28
653 654 4.534168 CATACGACTGTTATGAGTACGGG 58.466 47.826 0.00 0.00 0.00 5.28
654 655 3.973135 GCATACGACTGTTATGAGTACGG 59.027 47.826 4.15 0.00 0.00 4.02
655 656 4.594136 TGCATACGACTGTTATGAGTACG 58.406 43.478 4.15 0.00 0.00 3.67
656 657 6.263344 TCTTGCATACGACTGTTATGAGTAC 58.737 40.000 4.15 0.00 0.00 2.73
657 658 6.445357 TCTTGCATACGACTGTTATGAGTA 57.555 37.500 4.15 0.00 0.00 2.59
658 659 5.324784 TCTTGCATACGACTGTTATGAGT 57.675 39.130 4.15 0.00 0.00 3.41
659 660 7.809806 TGATATCTTGCATACGACTGTTATGAG 59.190 37.037 3.98 0.00 0.00 2.90
660 661 7.595130 GTGATATCTTGCATACGACTGTTATGA 59.405 37.037 3.98 0.00 0.00 2.15
661 662 7.382218 TGTGATATCTTGCATACGACTGTTATG 59.618 37.037 3.98 0.00 0.00 1.90
710 725 6.125029 AGTAATCAAGGACATAAGCTGCATT 58.875 36.000 1.02 0.00 0.00 3.56
721 736 3.009033 CCCACTTGGAGTAATCAAGGACA 59.991 47.826 8.41 0.00 44.13 4.02
822 1327 1.005037 TGCTACTCACAAGCACGGG 60.005 57.895 0.00 0.00 44.78 5.28
839 1344 3.305608 GGAGTTGCTGGGATTTTTGACTG 60.306 47.826 0.00 0.00 0.00 3.51
840 1345 2.893489 GGAGTTGCTGGGATTTTTGACT 59.107 45.455 0.00 0.00 0.00 3.41
841 1346 2.029020 GGGAGTTGCTGGGATTTTTGAC 60.029 50.000 0.00 0.00 0.00 3.18
844 1349 2.368548 GTTGGGAGTTGCTGGGATTTTT 59.631 45.455 0.00 0.00 0.00 1.94
866 1371 3.614870 GCTGGGATTTTTGACAGCGAAAT 60.615 43.478 0.00 0.00 45.56 2.17
1065 4490 1.213619 TGATGTGGCCCTGGAATGGA 61.214 55.000 0.00 0.00 0.00 3.41
1236 4667 2.527875 GGATCCTCCGGCTCCCAT 60.528 66.667 3.84 0.00 0.00 4.00
1549 4980 3.467226 GATGGCGAGGTCCGGGAA 61.467 66.667 0.00 0.00 39.04 3.97
1583 5014 0.175073 GTCGGAGGCGTAAATCAGGT 59.825 55.000 0.00 0.00 0.00 4.00
1631 5062 4.688966 GGATGCCGCCGAGATCCC 62.689 72.222 3.66 0.00 31.01 3.85
1643 5074 1.080434 GATACCCTCTCGCGGATGC 60.080 63.158 6.13 0.00 37.91 3.91
1655 5086 0.459063 GACGAACACCCACGATACCC 60.459 60.000 0.00 0.00 0.00 3.69
1717 5148 0.460284 ATAACTGGAAGGTGCTCGCG 60.460 55.000 0.00 0.00 39.30 5.87
1728 5159 1.117150 GGCCGACTGGTATAACTGGA 58.883 55.000 0.00 0.00 37.67 3.86
1731 5162 1.063114 AGAGGGCCGACTGGTATAACT 60.063 52.381 0.00 0.00 37.67 2.24
1756 5187 0.880718 GACCCATCGATTTCCGGCTC 60.881 60.000 0.00 0.00 39.14 4.70
1780 5220 0.596083 CAGCCGTCGTCATCCTCATC 60.596 60.000 0.00 0.00 0.00 2.92
1781 5221 1.439228 CAGCCGTCGTCATCCTCAT 59.561 57.895 0.00 0.00 0.00 2.90
1782 5222 2.885113 CAGCCGTCGTCATCCTCA 59.115 61.111 0.00 0.00 0.00 3.86
1783 5223 2.583593 GCAGCCGTCGTCATCCTC 60.584 66.667 0.00 0.00 0.00 3.71
1784 5224 2.635229 GATGCAGCCGTCGTCATCCT 62.635 60.000 0.00 0.00 31.62 3.24
1785 5225 2.202932 ATGCAGCCGTCGTCATCC 60.203 61.111 0.00 0.00 0.00 3.51
1877 5317 1.371145 GCTATCTCGGCAGTCTCGC 60.371 63.158 0.00 0.00 0.00 5.03
1959 5399 2.612115 AGGGTGCCCTGGAAGAGG 60.612 66.667 9.33 0.00 46.22 3.69
2060 5500 2.167861 GTGACGAAGCAGCCGATCC 61.168 63.158 0.00 0.00 0.00 3.36
2088 5528 0.818296 CCTCGGTGGTAGAGTTCCAG 59.182 60.000 0.00 0.00 35.49 3.86
2175 5615 0.892755 GTCGGTACACATCCACCAGA 59.107 55.000 0.00 0.00 34.25 3.86
2230 5670 1.815613 CTCGATGGATAGATGGAGCGT 59.184 52.381 0.00 0.00 0.00 5.07
2369 5809 6.485830 TTGGGATCTACTTTATCTGGTCAG 57.514 41.667 0.00 0.00 0.00 3.51
2407 5847 2.561419 TGAAGGGAGTACTAGTGCACAC 59.439 50.000 21.04 8.16 0.00 3.82
2472 5912 9.783256 GTCACAAAATAAGTGTCTTAACTTTGT 57.217 29.630 17.44 17.44 40.77 2.83
2473 5913 8.943925 CGTCACAAAATAAGTGTCTTAACTTTG 58.056 33.333 16.68 16.68 40.77 2.77
2474 5914 8.126700 CCGTCACAAAATAAGTGTCTTAACTTT 58.873 33.333 0.00 0.00 40.77 2.66
2475 5915 7.496591 TCCGTCACAAAATAAGTGTCTTAACTT 59.503 33.333 0.00 0.00 42.89 2.66
2476 5916 6.987992 TCCGTCACAAAATAAGTGTCTTAACT 59.012 34.615 0.00 0.00 38.16 2.24
2477 5917 7.181143 TCCGTCACAAAATAAGTGTCTTAAC 57.819 36.000 0.00 0.00 38.16 2.01
2478 5918 7.789273 TTCCGTCACAAAATAAGTGTCTTAA 57.211 32.000 0.00 0.00 38.16 1.85
2479 5919 7.972832 ATTCCGTCACAAAATAAGTGTCTTA 57.027 32.000 0.00 0.00 38.16 2.10
2480 5920 6.877611 ATTCCGTCACAAAATAAGTGTCTT 57.122 33.333 0.00 0.00 38.16 3.01
2481 5921 7.660208 ACTTATTCCGTCACAAAATAAGTGTCT 59.340 33.333 17.65 1.28 46.57 3.41
2482 5922 7.803724 ACTTATTCCGTCACAAAATAAGTGTC 58.196 34.615 17.65 0.00 46.57 3.67
2483 5923 7.739498 ACTTATTCCGTCACAAAATAAGTGT 57.261 32.000 17.65 2.67 46.57 3.55
2530 5970 1.134818 CGGCACACTCCACTAATAGCA 60.135 52.381 0.00 0.00 0.00 3.49
2531 5971 1.134788 ACGGCACACTCCACTAATAGC 60.135 52.381 0.00 0.00 0.00 2.97
2533 5973 2.172679 TGACGGCACACTCCACTAATA 58.827 47.619 0.00 0.00 0.00 0.98
2534 5974 0.973632 TGACGGCACACTCCACTAAT 59.026 50.000 0.00 0.00 0.00 1.73
2535 5975 0.973632 ATGACGGCACACTCCACTAA 59.026 50.000 0.00 0.00 0.00 2.24
2536 5976 0.530744 GATGACGGCACACTCCACTA 59.469 55.000 0.00 0.00 0.00 2.74
2541 5981 0.179124 GAGAGGATGACGGCACACTC 60.179 60.000 14.54 14.54 32.96 3.51
2550 5990 1.751351 TGACCATCACGAGAGGATGAC 59.249 52.381 4.07 0.00 43.80 3.06
2578 6018 2.564947 AGAGATGAGACGGTGAAAAGCT 59.435 45.455 0.00 0.00 0.00 3.74
3040 6489 2.835701 GATGCGCAGTCCGGAGACAA 62.836 60.000 18.32 0.00 46.15 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.