Multiple sequence alignment - TraesCS3B01G295100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G295100 chr3B 100.000 2957 0 0 1 2957 473706139 473703183 0.000000e+00 5461
1 TraesCS3B01G295100 chr3B 94.697 792 35 5 1 789 17282275 17281488 0.000000e+00 1223
2 TraesCS3B01G295100 chr3B 94.028 787 44 3 1 786 117940366 117941150 0.000000e+00 1190
3 TraesCS3B01G295100 chr3B 91.153 859 59 6 995 1840 474016975 474017829 0.000000e+00 1149
4 TraesCS3B01G295100 chr3B 89.778 450 30 10 1 435 4541398 4541846 1.990000e-156 562
5 TraesCS3B01G295100 chr3B 92.488 213 10 3 2745 2957 474018995 474019201 1.720000e-77 300
6 TraesCS3B01G295100 chr2A 96.315 787 28 1 1 786 615703295 615702509 0.000000e+00 1291
7 TraesCS3B01G295100 chr2A 79.545 176 28 1 1121 1288 775761816 775761641 5.180000e-23 119
8 TraesCS3B01G295100 chr6B 96.081 791 30 1 1 790 204355098 204355888 0.000000e+00 1288
9 TraesCS3B01G295100 chr6B 84.370 627 63 19 1 609 289783894 289783285 1.530000e-162 582
10 TraesCS3B01G295100 chr6B 90.200 449 29 5 1 435 16957666 16957219 3.310000e-159 571
11 TraesCS3B01G295100 chr6B 90.306 196 19 0 591 786 16956773 16956578 1.050000e-64 257
12 TraesCS3B01G295100 chr3A 87.207 1024 87 21 995 2004 484999243 485000236 0.000000e+00 1125
13 TraesCS3B01G295100 chr3A 86.927 1025 88 22 995 2004 484643881 484642888 0.000000e+00 1109
14 TraesCS3B01G295100 chr3A 79.979 934 142 23 891 1807 484651150 484650245 0.000000e+00 647
15 TraesCS3B01G295100 chr3A 84.524 336 33 6 2631 2957 484644513 484644188 6.150000e-82 315
16 TraesCS3B01G295100 chr3A 95.556 90 3 1 787 875 484651446 484651357 3.070000e-30 143
17 TraesCS3B01G295100 chr3A 90.090 111 8 2 2369 2476 484644738 484644628 1.100000e-29 141
18 TraesCS3B01G295100 chr2B 89.648 454 28 11 1 435 221999399 221998946 7.160000e-156 560
19 TraesCS3B01G295100 chr2B 89.556 450 31 10 1 435 775130083 775130531 9.260000e-155 556
20 TraesCS3B01G295100 chr2B 78.736 348 56 11 1119 1465 784709282 784709612 1.780000e-52 217
21 TraesCS3B01G295100 chr2B 87.059 170 20 2 449 618 221998463 221998296 1.080000e-44 191
22 TraesCS3B01G295100 chr3D 89.645 338 25 3 2625 2957 363858052 363858384 3.520000e-114 422
23 TraesCS3B01G295100 chr3D 83.795 469 37 13 2496 2957 363602241 363601805 2.740000e-110 409
24 TraesCS3B01G295100 chr3D 93.750 256 11 3 1 254 576313331 576313079 2.150000e-101 379
25 TraesCS3B01G295100 chr3D 88.263 213 19 3 2745 2957 363859798 363860004 1.760000e-62 250
26 TraesCS3B01G295100 chr3D 85.116 215 17 6 586 790 576312620 576312411 3.860000e-49 206
27 TraesCS3B01G295100 chr3D 84.466 206 17 9 586 790 590168075 590167884 3.890000e-44 189
28 TraesCS3B01G295100 chr3D 89.815 108 7 3 790 893 363857138 363857245 5.140000e-28 135
29 TraesCS3B01G295100 chr7B 87.129 202 26 0 588 789 390741303 390741504 2.290000e-56 230
30 TraesCS3B01G295100 chr6A 86.301 146 20 0 641 786 7351032 7351177 3.050000e-35 159


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G295100 chr3B 473703183 473706139 2956 True 5461.000000 5461 100.000000 1 2957 1 chr3B.!!$R2 2956
1 TraesCS3B01G295100 chr3B 17281488 17282275 787 True 1223.000000 1223 94.697000 1 789 1 chr3B.!!$R1 788
2 TraesCS3B01G295100 chr3B 117940366 117941150 784 False 1190.000000 1190 94.028000 1 786 1 chr3B.!!$F2 785
3 TraesCS3B01G295100 chr3B 474016975 474019201 2226 False 724.500000 1149 91.820500 995 2957 2 chr3B.!!$F3 1962
4 TraesCS3B01G295100 chr2A 615702509 615703295 786 True 1291.000000 1291 96.315000 1 786 1 chr2A.!!$R1 785
5 TraesCS3B01G295100 chr6B 204355098 204355888 790 False 1288.000000 1288 96.081000 1 790 1 chr6B.!!$F1 789
6 TraesCS3B01G295100 chr6B 289783285 289783894 609 True 582.000000 582 84.370000 1 609 1 chr6B.!!$R1 608
7 TraesCS3B01G295100 chr6B 16956578 16957666 1088 True 414.000000 571 90.253000 1 786 2 chr6B.!!$R2 785
8 TraesCS3B01G295100 chr3A 484999243 485000236 993 False 1125.000000 1125 87.207000 995 2004 1 chr3A.!!$F1 1009
9 TraesCS3B01G295100 chr3A 484642888 484644738 1850 True 521.666667 1109 87.180333 995 2957 3 chr3A.!!$R1 1962
10 TraesCS3B01G295100 chr3A 484650245 484651446 1201 True 395.000000 647 87.767500 787 1807 2 chr3A.!!$R2 1020
11 TraesCS3B01G295100 chr2B 221998296 221999399 1103 True 375.500000 560 88.353500 1 618 2 chr2B.!!$R1 617
12 TraesCS3B01G295100 chr3D 576312411 576313331 920 True 292.500000 379 89.433000 1 790 2 chr3D.!!$R3 789
13 TraesCS3B01G295100 chr3D 363857138 363860004 2866 False 269.000000 422 89.241000 790 2957 3 chr3D.!!$F1 2167

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
990 2240 0.741574 TCTCCTGACTCTCGTCTCGC 60.742 60.0 0.0 0.0 40.86 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2117 4386 0.040067 CGAACCACAGCTTCAAAGGC 60.04 55.0 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
341 415 9.905713 AAATTTATTGGTCATGTAGCTCTTAGA 57.094 29.630 0.00 0.00 0.00 2.10
453 1006 3.819564 AACATATGAAGGCTCTGCGTA 57.180 42.857 10.38 0.00 0.00 4.42
473 1240 7.549839 TGCGTACAGTTATGATAACTAAGGTT 58.450 34.615 16.73 3.46 39.26 3.50
485 1252 2.583143 ACTAAGGTTGTTTGCCCAGTC 58.417 47.619 0.00 0.00 0.00 3.51
543 1313 3.195661 GTTCGAAACAGGAGAACACAGT 58.804 45.455 0.00 0.00 42.56 3.55
544 1314 4.365723 GTTCGAAACAGGAGAACACAGTA 58.634 43.478 0.00 0.00 42.56 2.74
592 1362 1.539065 CGCTCTTTGACTCACAGGTGT 60.539 52.381 0.00 0.00 0.00 4.16
663 1500 4.950974 CCGCGCGCGTATACGAGT 62.951 66.667 45.51 0.00 43.02 4.18
680 1521 2.282555 CGAGTGAGATTTGCACCGTATG 59.717 50.000 0.00 0.00 36.95 2.39
700 1541 2.791868 GCACGCCCCAACCAAGTTT 61.792 57.895 0.00 0.00 0.00 2.66
798 1640 8.028938 GGTGTAATTGACTCATTACTTTGCATT 58.971 33.333 0.00 0.00 35.07 3.56
875 1727 5.401033 GCTGCATGCGATAATTAGATAGG 57.599 43.478 14.09 0.00 0.00 2.57
876 1728 5.111989 GCTGCATGCGATAATTAGATAGGA 58.888 41.667 14.09 0.00 0.00 2.94
877 1729 5.233902 GCTGCATGCGATAATTAGATAGGAG 59.766 44.000 14.09 0.00 0.00 3.69
920 2165 3.192844 AGGTCTATATACGGCCACATTCG 59.807 47.826 2.24 0.00 0.00 3.34
925 2170 4.794278 ATATACGGCCACATTCGTCATA 57.206 40.909 2.24 0.00 40.31 2.15
954 2201 4.390603 ACGCGTGCATAATCAGAGTTTAAA 59.609 37.500 12.93 0.00 0.00 1.52
958 2205 6.620733 GCGTGCATAATCAGAGTTTAAACAGT 60.621 38.462 20.06 3.99 0.00 3.55
986 2236 1.735571 GTCTGTCTCCTGACTCTCGTC 59.264 57.143 0.00 0.00 43.29 4.20
987 2237 1.626321 TCTGTCTCCTGACTCTCGTCT 59.374 52.381 0.00 0.00 43.29 4.18
988 2238 2.006888 CTGTCTCCTGACTCTCGTCTC 58.993 57.143 0.00 0.00 43.29 3.36
989 2239 1.003851 GTCTCCTGACTCTCGTCTCG 58.996 60.000 0.00 0.00 40.86 4.04
990 2240 0.741574 TCTCCTGACTCTCGTCTCGC 60.742 60.000 0.00 0.00 40.86 5.03
991 2241 1.711060 CTCCTGACTCTCGTCTCGCC 61.711 65.000 0.00 0.00 40.86 5.54
1064 3291 1.078759 GTCCATGTCTTCGTCGCCTG 61.079 60.000 0.00 0.00 0.00 4.85
1115 3342 3.181503 GCCTACAATGATTCTGTGTGCTG 60.182 47.826 0.00 0.00 0.00 4.41
1146 3376 2.030401 GTGTGGCGGCGTTGACATA 61.030 57.895 9.37 0.00 0.00 2.29
1474 3716 3.254024 TTCTTCGGCTGCCACTCCC 62.254 63.158 20.29 0.00 0.00 4.30
1503 3754 3.905678 CACCCGGCTCCGCTAGAG 61.906 72.222 0.00 0.00 46.29 2.43
1510 3762 0.248702 GGCTCCGCTAGAGAAGTTCG 60.249 60.000 4.90 0.00 46.50 3.95
1578 3830 2.224209 TGTTTCCTTCGTCTTCACCTCC 60.224 50.000 0.00 0.00 0.00 4.30
1613 3865 2.915659 TCGGGAGCACGAACTGGT 60.916 61.111 0.00 0.00 40.34 4.00
1657 3909 3.090219 GCGCCGGTACTCCAGGAAT 62.090 63.158 1.90 0.00 32.09 3.01
1673 3925 4.100653 CCAGGAATATGCTCTGAGAAGTGA 59.899 45.833 9.28 0.00 0.00 3.41
1682 3934 1.949847 CTGAGAAGTGATCCGCCCGT 61.950 60.000 0.00 0.00 0.00 5.28
1683 3935 1.519455 GAGAAGTGATCCGCCCGTG 60.519 63.158 0.00 0.00 0.00 4.94
1684 3936 2.227089 GAGAAGTGATCCGCCCGTGT 62.227 60.000 0.00 0.00 0.00 4.49
1784 4042 4.433615 GACCTGTGCGAGAAATCTTATGA 58.566 43.478 0.00 0.00 0.00 2.15
1841 4099 4.077184 CTTGTGCTCCGGCGGGTA 62.077 66.667 27.98 13.65 42.25 3.69
1902 4163 2.990284 TCCAAACCCTCCATCAGGTAAA 59.010 45.455 0.00 0.00 41.51 2.01
1914 4175 5.014123 TCCATCAGGTAAATCCTTCACAACT 59.986 40.000 0.00 0.00 45.67 3.16
1942 4204 9.578439 GTCCTTCAATTTTATTCCATCTGAAAG 57.422 33.333 0.00 0.00 36.33 2.62
1952 4214 0.597568 CATCTGAAAGCAAACGGCCA 59.402 50.000 2.24 0.00 46.50 5.36
1961 4227 0.249031 GCAAACGGCCAATAGCATCC 60.249 55.000 2.24 0.00 46.50 3.51
1977 4246 0.034186 ATCCCTCGCTTGCCAATTGA 60.034 50.000 7.12 0.00 0.00 2.57
1979 4248 1.135315 CCTCGCTTGCCAATTGACG 59.865 57.895 7.12 2.95 0.00 4.35
1999 4268 0.179040 TTTCGCCGGAAGACAAACCT 60.179 50.000 5.05 0.00 32.80 3.50
2004 4273 2.159572 CGCCGGAAGACAAACCTAATTG 60.160 50.000 5.05 0.00 36.37 2.32
2005 4274 2.817844 GCCGGAAGACAAACCTAATTGT 59.182 45.455 5.05 0.00 45.82 2.71
2027 4296 7.503521 TGTCTACATCAATTAAAGTTGTGCA 57.496 32.000 0.00 0.00 0.00 4.57
2028 4297 7.935520 TGTCTACATCAATTAAAGTTGTGCAA 58.064 30.769 0.00 0.00 0.00 4.08
2031 4300 9.243637 TCTACATCAATTAAAGTTGTGCAAAAC 57.756 29.630 12.10 12.10 0.00 2.43
2042 4311 6.699575 AGTTGTGCAAAACTTATCTTGTCT 57.300 33.333 16.88 0.00 37.05 3.41
2043 4312 7.801716 AGTTGTGCAAAACTTATCTTGTCTA 57.198 32.000 16.88 0.00 37.05 2.59
2044 4313 7.639945 AGTTGTGCAAAACTTATCTTGTCTAC 58.360 34.615 16.88 0.00 37.05 2.59
2045 4314 7.282224 AGTTGTGCAAAACTTATCTTGTCTACA 59.718 33.333 16.88 0.00 37.05 2.74
2047 4316 7.990917 TGTGCAAAACTTATCTTGTCTACAAA 58.009 30.769 0.00 0.00 35.15 2.83
2048 4317 7.913297 TGTGCAAAACTTATCTTGTCTACAAAC 59.087 33.333 0.00 0.00 35.15 2.93
2050 4319 7.913297 TGCAAAACTTATCTTGTCTACAAACAC 59.087 33.333 0.00 0.00 35.15 3.32
2055 4324 6.759827 ACTTATCTTGTCTACAAACACAACGT 59.240 34.615 0.00 0.00 35.15 3.99
2058 4327 6.243811 TCTTGTCTACAAACACAACGTTTT 57.756 33.333 0.00 0.00 45.79 2.43
2059 4328 6.670233 TCTTGTCTACAAACACAACGTTTTT 58.330 32.000 0.00 0.00 45.79 1.94
2087 4356 7.960793 AGTTGTTAAATAAGCTGTGATACGTC 58.039 34.615 0.00 0.00 0.00 4.34
2088 4357 7.601130 AGTTGTTAAATAAGCTGTGATACGTCA 59.399 33.333 0.00 0.00 0.00 4.35
2089 4358 7.520119 TGTTAAATAAGCTGTGATACGTCAG 57.480 36.000 0.00 0.00 34.36 3.51
2091 4360 8.245491 TGTTAAATAAGCTGTGATACGTCAGTA 58.755 33.333 0.00 0.00 34.36 2.74
2093 4362 7.521509 AAATAAGCTGTGATACGTCAGTAAC 57.478 36.000 0.00 0.00 36.29 2.50
2094 4363 4.514781 AAGCTGTGATACGTCAGTAACA 57.485 40.909 0.00 0.00 36.29 2.41
2095 4364 4.098055 AGCTGTGATACGTCAGTAACAG 57.902 45.455 0.00 1.67 41.32 3.16
2097 4366 3.119602 GCTGTGATACGTCAGTAACAGGA 60.120 47.826 14.62 0.00 39.92 3.86
2098 4367 4.663166 CTGTGATACGTCAGTAACAGGAG 58.337 47.826 0.00 0.00 37.73 3.69
2099 4368 3.442625 TGTGATACGTCAGTAACAGGAGG 59.557 47.826 0.00 0.00 36.50 4.30
2100 4369 2.426024 TGATACGTCAGTAACAGGAGGC 59.574 50.000 0.00 0.00 36.29 4.70
2101 4370 2.211250 TACGTCAGTAACAGGAGGCT 57.789 50.000 0.00 0.00 0.00 4.58
2128 4397 1.532523 GCTCTTGAGCCTTTGAAGCT 58.467 50.000 11.24 0.00 45.23 3.74
2129 4398 1.199558 GCTCTTGAGCCTTTGAAGCTG 59.800 52.381 11.24 0.00 41.75 4.24
2131 4400 2.224606 TCTTGAGCCTTTGAAGCTGTG 58.775 47.619 0.00 0.00 41.75 3.66
2132 4401 1.268899 CTTGAGCCTTTGAAGCTGTGG 59.731 52.381 0.00 0.00 41.75 4.17
2134 4403 1.322442 GAGCCTTTGAAGCTGTGGTT 58.678 50.000 0.00 0.00 41.75 3.67
2135 4404 1.268079 GAGCCTTTGAAGCTGTGGTTC 59.732 52.381 0.00 2.95 41.75 3.62
2136 4405 0.040067 GCCTTTGAAGCTGTGGTTCG 60.040 55.000 0.00 0.00 42.15 3.95
2137 4406 0.593128 CCTTTGAAGCTGTGGTTCGG 59.407 55.000 0.00 0.00 42.15 4.30
2144 4413 3.006728 CTGTGGTTCGGCCCCCTA 61.007 66.667 0.00 0.00 36.04 3.53
2145 4414 2.529643 TGTGGTTCGGCCCCCTAA 60.530 61.111 0.00 0.00 36.04 2.69
2146 4415 2.132089 CTGTGGTTCGGCCCCCTAAA 62.132 60.000 0.00 0.00 36.04 1.85
2147 4416 1.075305 GTGGTTCGGCCCCCTAAAA 59.925 57.895 0.00 0.00 36.04 1.52
2148 4417 0.540133 GTGGTTCGGCCCCCTAAAAA 60.540 55.000 0.00 0.00 36.04 1.94
2166 4435 2.413310 AAAACTGTGGTTCGACTGGT 57.587 45.000 0.00 0.00 34.14 4.00
2167 4436 2.413310 AAACTGTGGTTCGACTGGTT 57.587 45.000 0.00 0.00 34.14 3.67
2168 4437 2.413310 AACTGTGGTTCGACTGGTTT 57.587 45.000 0.00 0.00 0.00 3.27
2170 4439 1.065709 ACTGTGGTTCGACTGGTTTGT 60.066 47.619 0.00 0.00 0.00 2.83
2171 4440 2.014128 CTGTGGTTCGACTGGTTTGTT 58.986 47.619 0.00 0.00 0.00 2.83
2172 4441 2.422127 CTGTGGTTCGACTGGTTTGTTT 59.578 45.455 0.00 0.00 0.00 2.83
2173 4442 2.820787 TGTGGTTCGACTGGTTTGTTTT 59.179 40.909 0.00 0.00 0.00 2.43
2176 4445 2.424246 GGTTCGACTGGTTTGTTTTGGA 59.576 45.455 0.00 0.00 0.00 3.53
2177 4446 3.488553 GGTTCGACTGGTTTGTTTTGGAG 60.489 47.826 0.00 0.00 0.00 3.86
2178 4447 2.993937 TCGACTGGTTTGTTTTGGAGT 58.006 42.857 0.00 0.00 0.00 3.85
2180 4449 3.759618 TCGACTGGTTTGTTTTGGAGTTT 59.240 39.130 0.00 0.00 0.00 2.66
2181 4450 4.218852 TCGACTGGTTTGTTTTGGAGTTTT 59.781 37.500 0.00 0.00 0.00 2.43
2182 4451 4.326009 CGACTGGTTTGTTTTGGAGTTTTG 59.674 41.667 0.00 0.00 0.00 2.44
2183 4452 5.474825 GACTGGTTTGTTTTGGAGTTTTGA 58.525 37.500 0.00 0.00 0.00 2.69
2184 4453 5.859495 ACTGGTTTGTTTTGGAGTTTTGAA 58.141 33.333 0.00 0.00 0.00 2.69
2185 4454 5.699001 ACTGGTTTGTTTTGGAGTTTTGAAC 59.301 36.000 0.00 0.00 0.00 3.18
2186 4455 4.998033 TGGTTTGTTTTGGAGTTTTGAACC 59.002 37.500 0.00 0.00 35.70 3.62
2187 4456 5.221742 TGGTTTGTTTTGGAGTTTTGAACCT 60.222 36.000 0.00 0.00 36.03 3.50
2188 4457 5.121611 GGTTTGTTTTGGAGTTTTGAACCTG 59.878 40.000 0.00 0.00 33.14 4.00
2189 4458 4.464069 TGTTTTGGAGTTTTGAACCTGG 57.536 40.909 0.00 0.00 0.00 4.45
2190 4459 3.196685 TGTTTTGGAGTTTTGAACCTGGG 59.803 43.478 0.00 0.00 0.00 4.45
2191 4460 1.408969 TTGGAGTTTTGAACCTGGGC 58.591 50.000 0.00 0.00 0.00 5.36
2193 4462 1.248486 GGAGTTTTGAACCTGGGCTC 58.752 55.000 0.00 0.00 0.00 4.70
2195 4464 0.182775 AGTTTTGAACCTGGGCTCGT 59.817 50.000 0.00 0.00 0.00 4.18
2196 4465 1.029681 GTTTTGAACCTGGGCTCGTT 58.970 50.000 0.00 0.00 0.00 3.85
2197 4466 1.407618 GTTTTGAACCTGGGCTCGTTT 59.592 47.619 0.00 0.00 0.00 3.60
2199 4468 2.871096 TTGAACCTGGGCTCGTTTAT 57.129 45.000 0.00 0.00 0.00 1.40
2201 4470 1.626321 TGAACCTGGGCTCGTTTATGA 59.374 47.619 0.00 0.00 0.00 2.15
2202 4471 2.238646 TGAACCTGGGCTCGTTTATGAT 59.761 45.455 0.00 0.00 0.00 2.45
2203 4472 3.279434 GAACCTGGGCTCGTTTATGATT 58.721 45.455 0.00 0.00 0.00 2.57
2204 4473 3.366052 ACCTGGGCTCGTTTATGATTT 57.634 42.857 0.00 0.00 0.00 2.17
2207 4476 2.285083 TGGGCTCGTTTATGATTTCCG 58.715 47.619 0.00 0.00 0.00 4.30
2208 4477 2.285977 GGGCTCGTTTATGATTTCCGT 58.714 47.619 0.00 0.00 0.00 4.69
2209 4478 2.287103 GGGCTCGTTTATGATTTCCGTC 59.713 50.000 0.00 0.00 0.00 4.79
2210 4479 2.034001 GGCTCGTTTATGATTTCCGTCG 60.034 50.000 0.00 0.00 0.00 5.12
2211 4480 2.034001 GCTCGTTTATGATTTCCGTCGG 60.034 50.000 4.39 4.39 0.00 4.79
2212 4481 2.538449 CTCGTTTATGATTTCCGTCGGG 59.462 50.000 12.29 0.00 0.00 5.14
2213 4482 1.595794 CGTTTATGATTTCCGTCGGGG 59.404 52.381 12.29 0.00 37.02 5.73
2231 4500 3.223674 GGGACACCCTTTTCAGAAAGA 57.776 47.619 0.00 0.00 44.03 2.52
2232 4501 3.562182 GGGACACCCTTTTCAGAAAGAA 58.438 45.455 0.00 0.00 44.03 2.52
2233 4502 3.958147 GGGACACCCTTTTCAGAAAGAAA 59.042 43.478 0.00 0.00 44.03 2.52
2298 4994 6.544038 AACACCAATTAAAAGCTCATTTGC 57.456 33.333 0.00 0.00 0.00 3.68
2299 4995 4.996758 ACACCAATTAAAAGCTCATTTGCC 59.003 37.500 0.00 0.00 0.00 4.52
2301 4997 3.062504 CCAATTAAAAGCTCATTTGCCGC 59.937 43.478 0.00 0.00 0.00 6.53
2302 4998 3.591196 ATTAAAAGCTCATTTGCCGCA 57.409 38.095 0.00 0.00 0.00 5.69
2303 4999 3.591196 TTAAAAGCTCATTTGCCGCAT 57.409 38.095 0.00 0.00 0.00 4.73
2305 5001 0.174162 AAAGCTCATTTGCCGCATCC 59.826 50.000 0.00 0.00 0.00 3.51
2306 5002 0.682209 AAGCTCATTTGCCGCATCCT 60.682 50.000 0.00 0.00 0.00 3.24
2307 5003 1.065273 GCTCATTTGCCGCATCCTG 59.935 57.895 0.00 0.00 0.00 3.86
2308 5004 1.065273 CTCATTTGCCGCATCCTGC 59.935 57.895 0.00 0.00 40.69 4.85
2309 5005 1.378911 TCATTTGCCGCATCCTGCT 60.379 52.632 0.00 0.00 42.25 4.24
2310 5006 1.065273 CATTTGCCGCATCCTGCTC 59.935 57.895 0.00 0.00 42.25 4.26
2311 5007 1.077212 ATTTGCCGCATCCTGCTCT 60.077 52.632 0.00 0.00 42.25 4.09
2312 5008 1.099879 ATTTGCCGCATCCTGCTCTC 61.100 55.000 0.00 0.00 42.25 3.20
2313 5009 4.519437 TGCCGCATCCTGCTCTCG 62.519 66.667 0.00 0.00 42.25 4.04
2328 5024 4.419522 GCTCTCGGCACTTATTTTCAAA 57.580 40.909 0.00 0.00 41.35 2.69
2330 5026 5.030936 GCTCTCGGCACTTATTTTCAAATC 58.969 41.667 0.00 0.00 41.35 2.17
2331 5027 5.163713 GCTCTCGGCACTTATTTTCAAATCT 60.164 40.000 0.00 0.00 41.35 2.40
2332 5028 6.623767 GCTCTCGGCACTTATTTTCAAATCTT 60.624 38.462 0.00 0.00 41.35 2.40
2333 5029 6.611381 TCTCGGCACTTATTTTCAAATCTTG 58.389 36.000 0.00 0.00 0.00 3.02
2334 5030 6.206634 TCTCGGCACTTATTTTCAAATCTTGT 59.793 34.615 0.00 0.00 0.00 3.16
2335 5031 6.744112 TCGGCACTTATTTTCAAATCTTGTT 58.256 32.000 0.00 0.00 0.00 2.83
2336 5032 7.206687 TCGGCACTTATTTTCAAATCTTGTTT 58.793 30.769 0.00 0.00 0.00 2.83
2337 5033 7.708752 TCGGCACTTATTTTCAAATCTTGTTTT 59.291 29.630 0.00 0.00 0.00 2.43
2338 5034 8.973378 CGGCACTTATTTTCAAATCTTGTTTTA 58.027 29.630 0.00 0.00 0.00 1.52
2345 5041 8.611654 ATTTTCAAATCTTGTTTTAGCATGCT 57.388 26.923 25.99 25.99 0.00 3.79
2346 5042 9.709495 ATTTTCAAATCTTGTTTTAGCATGCTA 57.291 25.926 23.52 23.52 0.00 3.49
2347 5043 9.539825 TTTTCAAATCTTGTTTTAGCATGCTAA 57.460 25.926 31.53 31.53 36.81 3.09
2348 5044 8.746922 TTCAAATCTTGTTTTAGCATGCTAAG 57.253 30.769 32.55 24.97 39.36 2.18
2349 5045 7.315142 TCAAATCTTGTTTTAGCATGCTAAGG 58.685 34.615 32.55 22.22 39.36 2.69
2350 5046 6.840780 AATCTTGTTTTAGCATGCTAAGGT 57.159 33.333 32.55 20.58 39.36 3.50
2352 5048 7.938140 ATCTTGTTTTAGCATGCTAAGGTTA 57.062 32.000 32.55 19.85 39.36 2.85
2353 5049 7.377766 TCTTGTTTTAGCATGCTAAGGTTAG 57.622 36.000 32.55 26.75 39.36 2.34
2354 5050 6.940298 TCTTGTTTTAGCATGCTAAGGTTAGT 59.060 34.615 32.55 7.81 39.36 2.24
2355 5051 6.737254 TGTTTTAGCATGCTAAGGTTAGTC 57.263 37.500 32.55 20.42 39.36 2.59
2356 5052 5.350365 TGTTTTAGCATGCTAAGGTTAGTCG 59.650 40.000 32.55 0.00 39.36 4.18
2358 5054 2.108168 AGCATGCTAAGGTTAGTCGGA 58.892 47.619 21.21 0.00 33.32 4.55
2360 5056 2.159085 GCATGCTAAGGTTAGTCGGAGT 60.159 50.000 11.37 0.00 33.32 3.85
2361 5057 3.448686 CATGCTAAGGTTAGTCGGAGTG 58.551 50.000 0.00 0.00 33.32 3.51
2364 5060 2.230750 GCTAAGGTTAGTCGGAGTGTGT 59.769 50.000 0.00 0.00 33.32 3.72
2365 5061 3.672781 GCTAAGGTTAGTCGGAGTGTGTC 60.673 52.174 0.00 0.00 33.32 3.67
2366 5062 0.879765 AGGTTAGTCGGAGTGTGTCG 59.120 55.000 0.00 0.00 0.00 4.35
2368 5064 0.240411 GTTAGTCGGAGTGTGTCGCT 59.760 55.000 0.00 0.00 0.00 4.93
2369 5065 0.956633 TTAGTCGGAGTGTGTCGCTT 59.043 50.000 0.00 0.00 0.00 4.68
2370 5066 1.812235 TAGTCGGAGTGTGTCGCTTA 58.188 50.000 0.00 0.00 0.00 3.09
2371 5067 1.174783 AGTCGGAGTGTGTCGCTTAT 58.825 50.000 0.00 0.00 0.00 1.73
2373 5069 2.950309 AGTCGGAGTGTGTCGCTTATAT 59.050 45.455 0.00 0.00 0.00 0.86
2378 5074 4.617223 CGGAGTGTGTCGCTTATATGTATG 59.383 45.833 0.00 0.00 0.00 2.39
2380 5076 4.944048 AGTGTGTCGCTTATATGTATGCA 58.056 39.130 7.88 0.00 32.17 3.96
2381 5077 4.745125 AGTGTGTCGCTTATATGTATGCAC 59.255 41.667 7.88 5.88 32.17 4.57
2382 5078 4.745125 GTGTGTCGCTTATATGTATGCACT 59.255 41.667 7.88 0.00 32.17 4.40
2383 5079 5.234329 GTGTGTCGCTTATATGTATGCACTT 59.766 40.000 7.88 0.00 32.17 3.16
2384 5080 5.234116 TGTGTCGCTTATATGTATGCACTTG 59.766 40.000 7.88 0.00 32.17 3.16
2385 5081 4.749598 TGTCGCTTATATGTATGCACTTGG 59.250 41.667 7.88 0.00 32.17 3.61
2386 5082 3.745975 TCGCTTATATGTATGCACTTGGC 59.254 43.478 7.88 0.00 45.13 4.52
2407 5103 7.867305 TGGCAAATCCAAAATACGTAGATAA 57.133 32.000 0.08 0.00 43.21 1.75
2408 5104 8.458573 TGGCAAATCCAAAATACGTAGATAAT 57.541 30.769 0.08 0.00 43.21 1.28
2409 5105 8.908903 TGGCAAATCCAAAATACGTAGATAATT 58.091 29.630 0.08 0.00 43.21 1.40
2410 5106 9.744468 GGCAAATCCAAAATACGTAGATAATTT 57.256 29.630 0.08 0.00 34.01 1.82
2423 5119 7.940850 ACGTAGATAATTTTCATTGGGAATGG 58.059 34.615 0.00 0.00 39.38 3.16
2424 5120 7.777910 ACGTAGATAATTTTCATTGGGAATGGA 59.222 33.333 0.00 0.00 39.38 3.41
2425 5121 8.629158 CGTAGATAATTTTCATTGGGAATGGAA 58.371 33.333 0.00 0.00 39.38 3.53
2426 5122 9.971922 GTAGATAATTTTCATTGGGAATGGAAG 57.028 33.333 0.00 0.00 37.65 3.46
2427 5123 8.026396 AGATAATTTTCATTGGGAATGGAAGG 57.974 34.615 0.00 0.00 37.65 3.46
2428 5124 7.845800 AGATAATTTTCATTGGGAATGGAAGGA 59.154 33.333 0.00 0.00 37.65 3.36
2429 5125 6.700845 AATTTTCATTGGGAATGGAAGGAA 57.299 33.333 0.00 0.00 37.65 3.36
2430 5126 6.700845 ATTTTCATTGGGAATGGAAGGAAA 57.299 33.333 0.00 0.00 37.65 3.13
2431 5127 6.700845 TTTTCATTGGGAATGGAAGGAAAT 57.299 33.333 0.00 0.00 37.65 2.17
2432 5128 5.680594 TTCATTGGGAATGGAAGGAAATG 57.319 39.130 0.00 0.00 39.38 2.32
2433 5129 4.686891 TCATTGGGAATGGAAGGAAATGT 58.313 39.130 0.00 0.00 39.38 2.71
2434 5130 4.711355 TCATTGGGAATGGAAGGAAATGTC 59.289 41.667 0.00 0.00 39.38 3.06
2435 5131 3.824001 TGGGAATGGAAGGAAATGTCA 57.176 42.857 0.00 0.00 0.00 3.58
2436 5132 3.700538 TGGGAATGGAAGGAAATGTCAG 58.299 45.455 0.00 0.00 0.00 3.51
2437 5133 3.075882 TGGGAATGGAAGGAAATGTCAGT 59.924 43.478 0.00 0.00 0.00 3.41
2438 5134 3.696548 GGGAATGGAAGGAAATGTCAGTC 59.303 47.826 0.00 0.00 0.00 3.51
2439 5135 4.568592 GGGAATGGAAGGAAATGTCAGTCT 60.569 45.833 0.00 0.00 0.00 3.24
2440 5136 4.637977 GGAATGGAAGGAAATGTCAGTCTC 59.362 45.833 0.00 0.00 0.00 3.36
2441 5137 4.916041 ATGGAAGGAAATGTCAGTCTCA 57.084 40.909 0.00 0.00 0.00 3.27
2442 5138 4.277515 TGGAAGGAAATGTCAGTCTCAG 57.722 45.455 0.00 0.00 0.00 3.35
2443 5139 3.008375 TGGAAGGAAATGTCAGTCTCAGG 59.992 47.826 0.00 0.00 0.00 3.86
2444 5140 3.261897 GGAAGGAAATGTCAGTCTCAGGA 59.738 47.826 0.00 0.00 0.00 3.86
2445 5141 4.263068 GGAAGGAAATGTCAGTCTCAGGAA 60.263 45.833 0.00 0.00 0.00 3.36
2446 5142 4.982241 AGGAAATGTCAGTCTCAGGAAA 57.018 40.909 0.00 0.00 0.00 3.13
2447 5143 5.511386 AGGAAATGTCAGTCTCAGGAAAT 57.489 39.130 0.00 0.00 0.00 2.17
2448 5144 5.885465 AGGAAATGTCAGTCTCAGGAAATT 58.115 37.500 0.00 0.00 0.00 1.82
2449 5145 7.020827 AGGAAATGTCAGTCTCAGGAAATTA 57.979 36.000 0.00 0.00 0.00 1.40
2450 5146 7.637511 AGGAAATGTCAGTCTCAGGAAATTAT 58.362 34.615 0.00 0.00 0.00 1.28
2451 5147 8.112183 AGGAAATGTCAGTCTCAGGAAATTATT 58.888 33.333 0.00 0.00 0.00 1.40
2452 5148 9.396022 GGAAATGTCAGTCTCAGGAAATTATTA 57.604 33.333 0.00 0.00 0.00 0.98
2455 5151 9.911788 AATGTCAGTCTCAGGAAATTATTATGT 57.088 29.630 0.00 0.00 0.00 2.29
2456 5152 8.722480 TGTCAGTCTCAGGAAATTATTATGTG 57.278 34.615 0.00 0.00 0.00 3.21
2457 5153 7.770433 TGTCAGTCTCAGGAAATTATTATGTGG 59.230 37.037 0.00 0.00 0.00 4.17
2458 5154 7.227512 GTCAGTCTCAGGAAATTATTATGTGGG 59.772 40.741 0.00 0.00 0.00 4.61
2459 5155 7.056635 CAGTCTCAGGAAATTATTATGTGGGT 58.943 38.462 0.00 0.00 0.00 4.51
2460 5156 7.012704 CAGTCTCAGGAAATTATTATGTGGGTG 59.987 40.741 0.00 0.00 0.00 4.61
2461 5157 6.828785 GTCTCAGGAAATTATTATGTGGGTGT 59.171 38.462 0.00 0.00 0.00 4.16
2462 5158 7.990886 GTCTCAGGAAATTATTATGTGGGTGTA 59.009 37.037 0.00 0.00 0.00 2.90
2463 5159 8.553153 TCTCAGGAAATTATTATGTGGGTGTAA 58.447 33.333 0.00 0.00 0.00 2.41
2464 5160 9.184523 CTCAGGAAATTATTATGTGGGTGTAAA 57.815 33.333 0.00 0.00 0.00 2.01
2465 5161 9.707957 TCAGGAAATTATTATGTGGGTGTAAAT 57.292 29.630 0.00 0.00 0.00 1.40
2466 5162 9.965824 CAGGAAATTATTATGTGGGTGTAAATC 57.034 33.333 0.00 0.00 0.00 2.17
2467 5163 9.707957 AGGAAATTATTATGTGGGTGTAAATCA 57.292 29.630 0.00 0.00 0.00 2.57
2468 5164 9.965824 GGAAATTATTATGTGGGTGTAAATCAG 57.034 33.333 0.00 0.00 0.00 2.90
2471 5167 9.693739 AATTATTATGTGGGTGTAAATCAGTCA 57.306 29.630 0.00 0.00 0.00 3.41
2472 5168 9.693739 ATTATTATGTGGGTGTAAATCAGTCAA 57.306 29.630 0.00 0.00 0.00 3.18
2473 5169 9.521841 TTATTATGTGGGTGTAAATCAGTCAAA 57.478 29.630 0.00 0.00 0.00 2.69
2474 5170 8.593945 ATTATGTGGGTGTAAATCAGTCAAAT 57.406 30.769 0.00 0.00 0.00 2.32
2475 5171 6.916360 ATGTGGGTGTAAATCAGTCAAATT 57.084 33.333 0.00 0.00 0.00 1.82
2476 5172 9.521841 TTATGTGGGTGTAAATCAGTCAAATTA 57.478 29.630 0.00 0.00 0.00 1.40
2477 5173 8.593945 ATGTGGGTGTAAATCAGTCAAATTAT 57.406 30.769 0.00 0.00 0.00 1.28
2478 5174 8.050778 TGTGGGTGTAAATCAGTCAAATTATC 57.949 34.615 0.00 0.00 0.00 1.75
2479 5175 7.122055 TGTGGGTGTAAATCAGTCAAATTATCC 59.878 37.037 0.00 0.00 0.00 2.59
2480 5176 6.605594 TGGGTGTAAATCAGTCAAATTATCCC 59.394 38.462 0.00 0.00 0.00 3.85
2481 5177 6.833933 GGGTGTAAATCAGTCAAATTATCCCT 59.166 38.462 0.00 0.00 0.00 4.20
2482 5178 7.013369 GGGTGTAAATCAGTCAAATTATCCCTC 59.987 40.741 0.00 0.00 0.00 4.30
2483 5179 7.254795 GGTGTAAATCAGTCAAATTATCCCTCG 60.255 40.741 0.00 0.00 0.00 4.63
2484 5180 5.757850 AAATCAGTCAAATTATCCCTCGC 57.242 39.130 0.00 0.00 0.00 5.03
2485 5181 3.904800 TCAGTCAAATTATCCCTCGCA 57.095 42.857 0.00 0.00 0.00 5.10
2486 5182 4.214986 TCAGTCAAATTATCCCTCGCAA 57.785 40.909 0.00 0.00 0.00 4.85
2487 5183 4.584874 TCAGTCAAATTATCCCTCGCAAA 58.415 39.130 0.00 0.00 0.00 3.68
2488 5184 5.007034 TCAGTCAAATTATCCCTCGCAAAA 58.993 37.500 0.00 0.00 0.00 2.44
2489 5185 5.475220 TCAGTCAAATTATCCCTCGCAAAAA 59.525 36.000 0.00 0.00 0.00 1.94
2515 5211 7.719689 AAAAATCAGTCAAATTATACACGCG 57.280 32.000 3.53 3.53 0.00 6.01
2516 5212 3.918258 TCAGTCAAATTATACACGCGC 57.082 42.857 5.73 0.00 0.00 6.86
2517 5213 3.254892 TCAGTCAAATTATACACGCGCA 58.745 40.909 5.73 0.00 0.00 6.09
2518 5214 3.061563 TCAGTCAAATTATACACGCGCAC 59.938 43.478 5.73 0.00 0.00 5.34
2519 5215 3.062099 CAGTCAAATTATACACGCGCACT 59.938 43.478 5.73 0.00 0.00 4.40
2520 5216 4.266739 CAGTCAAATTATACACGCGCACTA 59.733 41.667 5.73 0.00 0.00 2.74
2521 5217 4.503007 AGTCAAATTATACACGCGCACTAG 59.497 41.667 5.73 0.00 0.00 2.57
2522 5218 4.266976 GTCAAATTATACACGCGCACTAGT 59.733 41.667 5.73 1.87 0.00 2.57
2524 5220 3.984508 ATTATACACGCGCACTAGTCT 57.015 42.857 5.73 0.00 0.00 3.24
2526 5222 1.092348 ATACACGCGCACTAGTCTCA 58.908 50.000 5.73 0.00 0.00 3.27
2528 5224 0.663568 ACACGCGCACTAGTCTCAAC 60.664 55.000 5.73 0.00 0.00 3.18
2533 5229 1.200252 GCGCACTAGTCTCAACTCTCA 59.800 52.381 0.30 0.00 36.92 3.27
2536 5232 3.304726 CGCACTAGTCTCAACTCTCAACA 60.305 47.826 0.00 0.00 36.92 3.33
2543 5239 5.734720 AGTCTCAACTCTCAACAGAACAAA 58.265 37.500 0.00 0.00 0.00 2.83
2544 5240 5.582665 AGTCTCAACTCTCAACAGAACAAAC 59.417 40.000 0.00 0.00 0.00 2.93
2545 5241 5.582665 GTCTCAACTCTCAACAGAACAAACT 59.417 40.000 0.00 0.00 0.00 2.66
2548 5244 4.386867 ACTCTCAACAGAACAAACTCGA 57.613 40.909 0.00 0.00 0.00 4.04
2552 5248 4.338400 TCTCAACAGAACAAACTCGAGAGA 59.662 41.667 21.68 3.64 39.12 3.10
2555 5251 6.382608 TCAACAGAACAAACTCGAGAGATAG 58.617 40.000 21.68 6.51 40.84 2.08
2556 5252 6.206829 TCAACAGAACAAACTCGAGAGATAGA 59.793 38.462 21.68 0.00 40.84 1.98
2557 5253 6.189677 ACAGAACAAACTCGAGAGATAGAG 57.810 41.667 21.68 5.05 40.84 2.43
2558 5254 5.941058 ACAGAACAAACTCGAGAGATAGAGA 59.059 40.000 21.68 0.00 40.84 3.10
2560 5256 6.912051 CAGAACAAACTCGAGAGATAGAGATG 59.088 42.308 21.68 6.52 40.84 2.90
2561 5257 5.766150 ACAAACTCGAGAGATAGAGATGG 57.234 43.478 21.68 0.00 40.84 3.51
2562 5258 5.197451 ACAAACTCGAGAGATAGAGATGGT 58.803 41.667 21.68 0.00 40.84 3.55
2564 5260 6.485313 ACAAACTCGAGAGATAGAGATGGTAG 59.515 42.308 21.68 0.00 40.84 3.18
2566 5262 5.790593 ACTCGAGAGATAGAGATGGTAGAC 58.209 45.833 21.68 0.00 40.84 2.59
2567 5263 4.811908 TCGAGAGATAGAGATGGTAGACG 58.188 47.826 0.00 0.00 33.31 4.18
2568 5264 4.523558 TCGAGAGATAGAGATGGTAGACGA 59.476 45.833 0.00 0.00 33.31 4.20
2569 5265 4.624024 CGAGAGATAGAGATGGTAGACGAC 59.376 50.000 0.00 0.00 0.00 4.34
2570 5266 5.566032 CGAGAGATAGAGATGGTAGACGACT 60.566 48.000 0.00 0.00 0.00 4.18
2571 5267 5.547465 AGAGATAGAGATGGTAGACGACTG 58.453 45.833 0.00 0.00 0.00 3.51
2572 5268 5.305902 AGAGATAGAGATGGTAGACGACTGA 59.694 44.000 0.00 0.00 0.00 3.41
2573 5269 5.302360 AGATAGAGATGGTAGACGACTGAC 58.698 45.833 0.00 0.00 0.00 3.51
2574 5270 3.637911 AGAGATGGTAGACGACTGACT 57.362 47.619 0.00 0.00 0.00 3.41
2575 5271 4.757019 AGAGATGGTAGACGACTGACTA 57.243 45.455 0.00 0.00 0.00 2.59
2585 5281 4.097218 ACTGACTAGTCTGGCGCA 57.903 55.556 27.33 7.05 28.79 6.09
2586 5282 1.886585 ACTGACTAGTCTGGCGCAG 59.113 57.895 27.33 17.08 28.79 5.18
2587 5283 0.609406 ACTGACTAGTCTGGCGCAGA 60.609 55.000 27.33 7.66 38.25 4.26
2588 5284 0.100325 CTGACTAGTCTGGCGCAGAG 59.900 60.000 23.01 4.21 41.46 3.35
2589 5285 0.322546 TGACTAGTCTGGCGCAGAGA 60.323 55.000 23.01 7.05 41.46 3.10
2591 5287 2.222886 GACTAGTCTGGCGCAGAGATA 58.777 52.381 15.91 5.78 41.46 1.98
2592 5288 1.950909 ACTAGTCTGGCGCAGAGATAC 59.049 52.381 10.83 0.00 41.46 2.24
2593 5289 0.945099 TAGTCTGGCGCAGAGATACG 59.055 55.000 10.83 0.00 41.46 3.06
2595 5291 1.453197 TCTGGCGCAGAGATACGGA 60.453 57.895 10.83 0.00 35.39 4.69
2596 5292 0.823769 TCTGGCGCAGAGATACGGAT 60.824 55.000 10.83 0.00 35.39 4.18
2597 5293 0.665670 CTGGCGCAGAGATACGGATG 60.666 60.000 10.83 0.00 32.44 3.51
2598 5294 1.106944 TGGCGCAGAGATACGGATGA 61.107 55.000 10.83 0.00 0.00 2.92
2600 5296 0.664767 GCGCAGAGATACGGATGACC 60.665 60.000 0.30 0.00 0.00 4.02
2611 5307 3.713902 GGATGACCGGCAAGATCAT 57.286 52.632 0.00 1.97 35.26 2.45
2613 5309 0.590195 GATGACCGGCAAGATCATGC 59.410 55.000 14.46 14.46 45.67 4.06
2623 5319 2.035576 GCAAGATCATGCCCATTCTTCC 59.964 50.000 11.87 0.00 40.49 3.46
2624 5320 2.626743 CAAGATCATGCCCATTCTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
2625 5321 1.146566 AGATCATGCCCATTCTTCCCC 59.853 52.381 0.00 0.00 0.00 4.81
2626 5322 0.935942 ATCATGCCCATTCTTCCCCA 59.064 50.000 0.00 0.00 0.00 4.96
2627 5323 0.709397 TCATGCCCATTCTTCCCCAA 59.291 50.000 0.00 0.00 0.00 4.12
2628 5324 1.117150 CATGCCCATTCTTCCCCAAG 58.883 55.000 0.00 0.00 0.00 3.61
2633 5404 0.396278 CCATTCTTCCCCAAGAGCCC 60.396 60.000 0.00 0.00 39.90 5.19
2641 5412 2.032528 CCAAGAGCCCTCGCAACA 59.967 61.111 0.00 0.00 37.52 3.33
2643 5414 1.651240 CCAAGAGCCCTCGCAACATG 61.651 60.000 0.00 0.00 37.52 3.21
2645 5416 0.957395 AAGAGCCCTCGCAACATGTG 60.957 55.000 0.00 0.00 37.52 3.21
2650 5421 0.948623 CCCTCGCAACATGTGAACGA 60.949 55.000 14.86 14.86 36.34 3.85
2655 5426 0.310543 GCAACATGTGAACGAAGGCA 59.689 50.000 0.00 0.00 0.00 4.75
2656 5427 1.068333 GCAACATGTGAACGAAGGCAT 60.068 47.619 0.00 0.00 0.00 4.40
2659 5430 0.452987 CATGTGAACGAAGGCATGGG 59.547 55.000 0.00 0.00 36.15 4.00
2661 5432 2.046285 GTGAACGAAGGCATGGGGG 61.046 63.158 0.00 0.00 0.00 5.40
2662 5433 2.355115 GAACGAAGGCATGGGGGT 59.645 61.111 0.00 0.00 0.00 4.95
2663 5434 1.202099 TGAACGAAGGCATGGGGGTA 61.202 55.000 0.00 0.00 0.00 3.69
2664 5435 0.463833 GAACGAAGGCATGGGGGTAG 60.464 60.000 0.00 0.00 0.00 3.18
2667 5438 2.616893 AAGGCATGGGGGTAGGCA 60.617 61.111 0.00 0.00 0.00 4.75
2668 5439 2.631012 GAAGGCATGGGGGTAGGCAG 62.631 65.000 0.00 0.00 0.00 4.85
2669 5440 4.902645 GGCATGGGGGTAGGCAGC 62.903 72.222 0.00 0.00 0.00 5.25
2670 5441 4.127744 GCATGGGGGTAGGCAGCA 62.128 66.667 0.00 0.00 0.00 4.41
2673 5444 1.000359 ATGGGGGTAGGCAGCAAAC 60.000 57.895 0.00 0.00 0.00 2.93
2676 5447 1.977009 GGGGTAGGCAGCAAACCAC 60.977 63.158 15.38 9.39 34.83 4.16
2677 5448 1.977009 GGGTAGGCAGCAAACCACC 60.977 63.158 15.38 5.01 34.83 4.61
2678 5449 1.228429 GGTAGGCAGCAAACCACCA 60.228 57.895 9.94 0.00 33.28 4.17
2680 5451 0.537371 GTAGGCAGCAAACCACCAGT 60.537 55.000 0.00 0.00 0.00 4.00
2681 5452 0.184933 TAGGCAGCAAACCACCAGTT 59.815 50.000 0.00 0.00 41.81 3.16
2698 5469 8.973182 ACCACCAGTTTAAACTTTAAAGATCAA 58.027 29.630 21.92 8.74 37.08 2.57
2699 5470 9.810545 CCACCAGTTTAAACTTTAAAGATCAAA 57.189 29.630 21.92 13.56 37.08 2.69
2701 5472 9.529325 ACCAGTTTAAACTTTAAAGATCAAAGC 57.471 29.630 21.92 9.87 37.08 3.51
2713 5484 8.816640 TTAAAGATCAAAGCAAAGAATGGAAC 57.183 30.769 0.00 0.00 0.00 3.62
2763 5543 3.257469 CAGACATGCCTCTCTTGCTAA 57.743 47.619 0.00 0.00 0.00 3.09
2770 5550 0.615331 CCTCTCTTGCTAAGCCACCA 59.385 55.000 0.00 0.00 0.00 4.17
2771 5551 1.677217 CCTCTCTTGCTAAGCCACCAC 60.677 57.143 0.00 0.00 0.00 4.16
2772 5552 0.324943 TCTCTTGCTAAGCCACCACC 59.675 55.000 0.00 0.00 0.00 4.61
2773 5553 0.036732 CTCTTGCTAAGCCACCACCA 59.963 55.000 0.00 0.00 0.00 4.17
2774 5554 0.250727 TCTTGCTAAGCCACCACCAC 60.251 55.000 0.00 0.00 0.00 4.16
2795 5575 0.321387 TGCTGCTGCTTCTCCTCTTG 60.321 55.000 17.00 0.00 40.48 3.02
2796 5576 1.025647 GCTGCTGCTTCTCCTCTTGG 61.026 60.000 8.53 0.00 36.03 3.61
2797 5577 0.324285 CTGCTGCTTCTCCTCTTGGT 59.676 55.000 0.00 0.00 34.23 3.67
2798 5578 0.767375 TGCTGCTTCTCCTCTTGGTT 59.233 50.000 0.00 0.00 34.23 3.67
2800 5580 1.163554 CTGCTTCTCCTCTTGGTTGC 58.836 55.000 0.00 0.00 34.23 4.17
2802 5582 1.301677 GCTTCTCCTCTTGGTTGCCG 61.302 60.000 0.00 0.00 34.23 5.69
2803 5583 0.035458 CTTCTCCTCTTGGTTGCCGT 59.965 55.000 0.00 0.00 34.23 5.68
2804 5584 0.472471 TTCTCCTCTTGGTTGCCGTT 59.528 50.000 0.00 0.00 34.23 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
219 238 8.910351 ATCCAAAGAATAAGGAACTAGCATAC 57.090 34.615 0.00 0.00 38.49 2.39
318 392 9.733556 TTTTCTAAGAGCTACATGACCAATAAA 57.266 29.630 0.00 0.00 0.00 1.40
341 415 6.098266 ACCCAGCAAGACAAATAACTCTTTTT 59.902 34.615 0.00 0.00 0.00 1.94
453 1006 8.512138 GCAAACAACCTTAGTTATCATAACTGT 58.488 33.333 18.85 6.74 33.27 3.55
485 1252 1.284657 CATGCACTCAAGTCTAGCCG 58.715 55.000 0.00 0.00 0.00 5.52
494 1261 2.161855 CTTGGCCTTACATGCACTCAA 58.838 47.619 3.32 0.00 0.00 3.02
592 1362 1.302431 CGTGGCAGTGATTGGGTCA 60.302 57.895 0.00 0.00 0.00 4.02
617 1446 7.564793 TGACATGGCTTTGTACATCTATACTT 58.435 34.615 0.00 0.00 0.00 2.24
680 1521 3.977244 CTTGGTTGGGGCGTGCAC 61.977 66.667 6.82 6.82 0.00 4.57
700 1541 2.680841 GCATACATTGAACGGGTGCTAA 59.319 45.455 0.00 0.00 0.00 3.09
849 1693 3.992427 TCTAATTATCGCATGCAGCTCTG 59.008 43.478 19.57 0.00 42.61 3.35
872 1724 5.566230 GCGTGGACTTTTCTTTCTACTCCTA 60.566 44.000 0.00 0.00 0.00 2.94
873 1725 4.799917 GCGTGGACTTTTCTTTCTACTCCT 60.800 45.833 0.00 0.00 0.00 3.69
874 1726 3.432592 GCGTGGACTTTTCTTTCTACTCC 59.567 47.826 0.00 0.00 0.00 3.85
875 1727 3.432592 GGCGTGGACTTTTCTTTCTACTC 59.567 47.826 0.00 0.00 0.00 2.59
876 1728 3.181458 TGGCGTGGACTTTTCTTTCTACT 60.181 43.478 0.00 0.00 0.00 2.57
877 1729 3.135994 TGGCGTGGACTTTTCTTTCTAC 58.864 45.455 0.00 0.00 0.00 2.59
920 2165 0.236187 TGCACGCGTTTGGTTATGAC 59.764 50.000 10.22 0.00 0.00 3.06
925 2170 1.537638 TGATTATGCACGCGTTTGGTT 59.462 42.857 10.22 0.00 0.00 3.67
1007 3234 0.955919 GAGCAAGTGTGGTGGTAGGC 60.956 60.000 0.00 0.00 35.00 3.93
1064 3291 2.194326 GAAGAGGGGAGCCATGGC 59.806 66.667 30.12 30.12 42.33 4.40
1115 3342 1.004918 CCACACCTGAACGACTCCC 60.005 63.158 0.00 0.00 0.00 4.30
1146 3376 7.386299 GCGTTTGACAGATAGAATGGATATCTT 59.614 37.037 2.05 0.00 37.79 2.40
1474 3716 4.271816 CGGGTGATCGCTCTCCGG 62.272 72.222 12.89 0.00 36.15 5.14
1510 3762 2.003301 GAACCCTTTGCAGTCGATCTC 58.997 52.381 0.00 0.00 0.00 2.75
1578 3830 0.790814 GAGAAACGTTGCCTTCCTCG 59.209 55.000 0.00 0.00 0.00 4.63
1613 3865 1.002430 CCTTCTGCCTGCAGTACTCAA 59.998 52.381 17.96 4.78 43.96 3.02
1657 3909 2.035193 GCGGATCACTTCTCAGAGCATA 59.965 50.000 0.00 0.00 0.00 3.14
1673 3925 3.361977 GCAACAACACGGGCGGAT 61.362 61.111 0.00 0.00 0.00 4.18
1682 3934 1.801771 CGTAATCCTTCGGCAACAACA 59.198 47.619 0.00 0.00 0.00 3.33
1683 3935 1.129811 CCGTAATCCTTCGGCAACAAC 59.870 52.381 0.00 0.00 40.28 3.32
1684 3936 1.444836 CCGTAATCCTTCGGCAACAA 58.555 50.000 0.00 0.00 40.28 2.83
1794 4052 3.866327 GGAATTCCTTCTTCTCGCTGTAC 59.134 47.826 17.73 0.00 0.00 2.90
1872 4130 2.171870 TGGAGGGTTTGGATTCGGATAC 59.828 50.000 0.00 0.00 0.00 2.24
1873 4131 2.483547 TGGAGGGTTTGGATTCGGATA 58.516 47.619 0.00 0.00 0.00 2.59
1874 4132 1.295020 TGGAGGGTTTGGATTCGGAT 58.705 50.000 0.00 0.00 0.00 4.18
1875 4133 1.211949 GATGGAGGGTTTGGATTCGGA 59.788 52.381 0.00 0.00 0.00 4.55
1876 4134 1.064758 TGATGGAGGGTTTGGATTCGG 60.065 52.381 0.00 0.00 0.00 4.30
1877 4135 2.292267 CTGATGGAGGGTTTGGATTCG 58.708 52.381 0.00 0.00 0.00 3.34
1878 4136 2.659428 CCTGATGGAGGGTTTGGATTC 58.341 52.381 0.00 0.00 38.36 2.52
1902 4163 2.711009 TGAAGGACCAGTTGTGAAGGAT 59.289 45.455 0.00 0.00 0.00 3.24
1914 4175 7.181361 TCAGATGGAATAAAATTGAAGGACCA 58.819 34.615 0.00 0.00 0.00 4.02
1942 4204 0.249031 GGATGCTATTGGCCGTTTGC 60.249 55.000 0.00 0.76 40.92 3.68
1952 4214 0.536006 GGCAAGCGAGGGATGCTATT 60.536 55.000 0.00 0.00 43.14 1.73
1961 4227 1.135315 CGTCAATTGGCAAGCGAGG 59.865 57.895 11.22 6.53 0.00 4.63
1977 4246 0.810823 TTTGTCTTCCGGCGAAACGT 60.811 50.000 9.30 0.00 0.00 3.99
1979 4248 0.040692 GGTTTGTCTTCCGGCGAAAC 60.041 55.000 9.30 9.84 0.00 2.78
2004 4273 8.795786 TTTGCACAACTTTAATTGATGTAGAC 57.204 30.769 0.00 0.00 33.57 2.59
2005 4274 9.243637 GTTTTGCACAACTTTAATTGATGTAGA 57.756 29.630 8.49 0.00 33.57 2.59
2006 4275 9.248291 AGTTTTGCACAACTTTAATTGATGTAG 57.752 29.630 12.46 0.00 32.81 2.74
2008 4277 8.491331 AAGTTTTGCACAACTTTAATTGATGT 57.509 26.923 22.23 0.00 43.17 3.06
2014 4283 9.816354 ACAAGATAAGTTTTGCACAACTTTAAT 57.184 25.926 30.01 20.57 43.17 1.40
2015 4284 9.296400 GACAAGATAAGTTTTGCACAACTTTAA 57.704 29.630 30.01 17.25 43.17 1.52
2017 4286 7.547227 AGACAAGATAAGTTTTGCACAACTTT 58.453 30.769 30.01 19.57 43.17 2.66
2019 4288 6.699575 AGACAAGATAAGTTTTGCACAACT 57.300 33.333 12.46 12.46 38.74 3.16
2020 4289 7.414436 TGTAGACAAGATAAGTTTTGCACAAC 58.586 34.615 7.67 7.67 0.00 3.32
2021 4290 7.561021 TGTAGACAAGATAAGTTTTGCACAA 57.439 32.000 0.00 0.00 0.00 3.33
2022 4291 7.561021 TTGTAGACAAGATAAGTTTTGCACA 57.439 32.000 0.00 0.00 0.00 4.57
2023 4292 7.913297 TGTTTGTAGACAAGATAAGTTTTGCAC 59.087 33.333 0.00 0.00 37.15 4.57
2024 4293 7.913297 GTGTTTGTAGACAAGATAAGTTTTGCA 59.087 33.333 0.00 0.00 37.15 4.08
2025 4294 7.913297 TGTGTTTGTAGACAAGATAAGTTTTGC 59.087 33.333 0.00 0.00 37.15 3.68
2027 4296 9.783256 GTTGTGTTTGTAGACAAGATAAGTTTT 57.217 29.630 0.00 0.00 38.11 2.43
2028 4297 8.120465 CGTTGTGTTTGTAGACAAGATAAGTTT 58.880 33.333 0.00 0.00 38.11 2.66
2031 4300 7.173863 ACGTTGTGTTTGTAGACAAGATAAG 57.826 36.000 0.00 0.00 38.11 1.73
2061 4330 8.991243 ACGTATCACAGCTTATTTAACAACTA 57.009 30.769 0.00 0.00 0.00 2.24
2063 4332 7.735500 TGACGTATCACAGCTTATTTAACAAC 58.264 34.615 0.00 0.00 0.00 3.32
2067 4336 9.079833 GTTACTGACGTATCACAGCTTATTTAA 57.920 33.333 2.13 0.00 37.61 1.52
2068 4337 8.245491 TGTTACTGACGTATCACAGCTTATTTA 58.755 33.333 2.13 0.00 37.61 1.40
2070 4339 6.627243 TGTTACTGACGTATCACAGCTTATT 58.373 36.000 2.13 0.00 37.61 1.40
2073 4342 4.486090 CTGTTACTGACGTATCACAGCTT 58.514 43.478 2.13 0.00 37.61 3.74
2074 4343 3.119459 CCTGTTACTGACGTATCACAGCT 60.119 47.826 2.13 0.00 34.98 4.24
2075 4344 3.119602 TCCTGTTACTGACGTATCACAGC 60.120 47.826 2.13 0.00 34.98 4.40
2076 4345 4.438880 CCTCCTGTTACTGACGTATCACAG 60.439 50.000 0.74 0.74 35.60 3.66
2078 4347 3.734293 GCCTCCTGTTACTGACGTATCAC 60.734 52.174 0.00 0.00 0.00 3.06
2080 4349 2.688958 AGCCTCCTGTTACTGACGTATC 59.311 50.000 0.00 0.00 0.00 2.24
2081 4350 2.736347 AGCCTCCTGTTACTGACGTAT 58.264 47.619 0.00 0.00 0.00 3.06
2082 4351 2.211250 AGCCTCCTGTTACTGACGTA 57.789 50.000 0.00 0.00 0.00 3.57
2083 4352 2.093106 CTAGCCTCCTGTTACTGACGT 58.907 52.381 0.00 0.00 0.00 4.34
2084 4353 1.202313 GCTAGCCTCCTGTTACTGACG 60.202 57.143 2.29 0.00 0.00 4.35
2085 4354 1.825474 TGCTAGCCTCCTGTTACTGAC 59.175 52.381 13.29 0.00 0.00 3.51
2087 4356 1.827969 ACTGCTAGCCTCCTGTTACTG 59.172 52.381 13.29 0.00 0.00 2.74
2088 4357 1.827969 CACTGCTAGCCTCCTGTTACT 59.172 52.381 13.29 0.00 0.00 2.24
2089 4358 1.134670 CCACTGCTAGCCTCCTGTTAC 60.135 57.143 13.29 0.00 0.00 2.50
2091 4360 1.986413 CCACTGCTAGCCTCCTGTT 59.014 57.895 13.29 0.00 0.00 3.16
2093 4362 2.188994 GCCACTGCTAGCCTCCTG 59.811 66.667 13.29 1.74 33.53 3.86
2112 4381 1.268899 CCACAGCTTCAAAGGCTCAAG 59.731 52.381 0.00 0.00 38.03 3.02
2113 4382 1.321474 CCACAGCTTCAAAGGCTCAA 58.679 50.000 0.00 0.00 38.03 3.02
2115 4384 1.268079 GAACCACAGCTTCAAAGGCTC 59.732 52.381 0.00 0.00 38.03 4.70
2116 4385 1.322442 GAACCACAGCTTCAAAGGCT 58.678 50.000 0.00 0.00 41.07 4.58
2117 4386 0.040067 CGAACCACAGCTTCAAAGGC 60.040 55.000 0.00 0.00 0.00 4.35
2118 4387 0.593128 CCGAACCACAGCTTCAAAGG 59.407 55.000 0.00 0.00 0.00 3.11
2121 4390 1.896660 GGCCGAACCACAGCTTCAA 60.897 57.895 0.00 0.00 38.86 2.69
2122 4391 2.281484 GGCCGAACCACAGCTTCA 60.281 61.111 0.00 0.00 38.86 3.02
2123 4392 3.056328 GGGCCGAACCACAGCTTC 61.056 66.667 0.00 0.00 42.05 3.86
2129 4398 0.540133 TTTTTAGGGGGCCGAACCAC 60.540 55.000 11.73 0.00 43.58 4.16
2131 4400 4.848000 TTTTTAGGGGGCCGAACC 57.152 55.556 0.00 0.00 37.93 3.62
2146 4415 2.718563 ACCAGTCGAACCACAGTTTTT 58.281 42.857 0.00 0.00 35.94 1.94
2147 4416 2.413310 ACCAGTCGAACCACAGTTTT 57.587 45.000 0.00 0.00 35.94 2.43
2148 4417 2.413310 AACCAGTCGAACCACAGTTT 57.587 45.000 0.00 0.00 35.94 2.66
2149 4418 2.014128 CAAACCAGTCGAACCACAGTT 58.986 47.619 0.00 0.00 39.54 3.16
2150 4419 1.065709 ACAAACCAGTCGAACCACAGT 60.066 47.619 0.00 0.00 0.00 3.55
2153 4422 3.175929 CAAAACAAACCAGTCGAACCAC 58.824 45.455 0.00 0.00 0.00 4.16
2155 4424 2.424246 TCCAAAACAAACCAGTCGAACC 59.576 45.455 0.00 0.00 0.00 3.62
2156 4425 3.128068 ACTCCAAAACAAACCAGTCGAAC 59.872 43.478 0.00 0.00 0.00 3.95
2157 4426 3.349022 ACTCCAAAACAAACCAGTCGAA 58.651 40.909 0.00 0.00 0.00 3.71
2158 4427 2.993937 ACTCCAAAACAAACCAGTCGA 58.006 42.857 0.00 0.00 0.00 4.20
2159 4428 3.775661 AACTCCAAAACAAACCAGTCG 57.224 42.857 0.00 0.00 0.00 4.18
2161 4430 5.476091 TCAAAACTCCAAAACAAACCAGT 57.524 34.783 0.00 0.00 0.00 4.00
2162 4431 5.121611 GGTTCAAAACTCCAAAACAAACCAG 59.878 40.000 0.00 0.00 35.00 4.00
2165 4434 5.121611 CCAGGTTCAAAACTCCAAAACAAAC 59.878 40.000 0.00 0.00 0.00 2.93
2166 4435 5.241662 CCAGGTTCAAAACTCCAAAACAAA 58.758 37.500 0.00 0.00 0.00 2.83
2167 4436 4.323104 CCCAGGTTCAAAACTCCAAAACAA 60.323 41.667 0.00 0.00 0.00 2.83
2168 4437 3.196685 CCCAGGTTCAAAACTCCAAAACA 59.803 43.478 0.00 0.00 0.00 2.83
2170 4439 2.169561 GCCCAGGTTCAAAACTCCAAAA 59.830 45.455 0.00 0.00 0.00 2.44
2171 4440 1.760029 GCCCAGGTTCAAAACTCCAAA 59.240 47.619 0.00 0.00 0.00 3.28
2172 4441 1.063266 AGCCCAGGTTCAAAACTCCAA 60.063 47.619 0.00 0.00 0.00 3.53
2173 4442 0.555769 AGCCCAGGTTCAAAACTCCA 59.444 50.000 0.00 0.00 0.00 3.86
2176 4445 0.182775 ACGAGCCCAGGTTCAAAACT 59.817 50.000 1.30 0.00 0.00 2.66
2177 4446 1.029681 AACGAGCCCAGGTTCAAAAC 58.970 50.000 1.30 0.00 0.00 2.43
2178 4447 1.770294 AAACGAGCCCAGGTTCAAAA 58.230 45.000 1.30 0.00 0.00 2.44
2180 4449 2.039216 TCATAAACGAGCCCAGGTTCAA 59.961 45.455 1.30 0.00 0.00 2.69
2181 4450 1.626321 TCATAAACGAGCCCAGGTTCA 59.374 47.619 1.30 0.00 0.00 3.18
2182 4451 2.396590 TCATAAACGAGCCCAGGTTC 57.603 50.000 0.00 0.00 0.00 3.62
2183 4452 3.366052 AATCATAAACGAGCCCAGGTT 57.634 42.857 0.00 0.00 0.00 3.50
2184 4453 3.279434 GAAATCATAAACGAGCCCAGGT 58.721 45.455 0.00 0.00 0.00 4.00
2185 4454 2.618709 GGAAATCATAAACGAGCCCAGG 59.381 50.000 0.00 0.00 0.00 4.45
2186 4455 2.287915 CGGAAATCATAAACGAGCCCAG 59.712 50.000 0.00 0.00 0.00 4.45
2187 4456 2.285083 CGGAAATCATAAACGAGCCCA 58.715 47.619 0.00 0.00 0.00 5.36
2188 4457 2.285977 ACGGAAATCATAAACGAGCCC 58.714 47.619 0.00 0.00 0.00 5.19
2189 4458 2.034001 CGACGGAAATCATAAACGAGCC 60.034 50.000 0.00 0.00 0.00 4.70
2190 4459 2.034001 CCGACGGAAATCATAAACGAGC 60.034 50.000 8.64 0.00 0.00 5.03
2191 4460 2.538449 CCCGACGGAAATCATAAACGAG 59.462 50.000 17.49 0.00 0.00 4.18
2193 4462 1.595794 CCCCGACGGAAATCATAAACG 59.404 52.381 17.49 0.00 0.00 3.60
2195 4464 2.236644 TGTCCCCGACGGAAATCATAAA 59.763 45.455 17.49 0.00 44.47 1.40
2196 4465 1.832366 TGTCCCCGACGGAAATCATAA 59.168 47.619 17.49 0.00 44.47 1.90
2197 4466 1.137479 GTGTCCCCGACGGAAATCATA 59.863 52.381 17.49 0.00 44.47 2.15
2199 4468 1.294138 GTGTCCCCGACGGAAATCA 59.706 57.895 17.49 6.20 44.47 2.57
2201 4470 2.666812 GGTGTCCCCGACGGAAAT 59.333 61.111 17.49 0.00 44.47 2.17
2202 4471 3.628982 GGGTGTCCCCGACGGAAA 61.629 66.667 17.49 0.00 44.47 3.13
2210 4479 5.177337 TTTCTTTCTGAAAAGGGTGTCCCC 61.177 45.833 4.18 0.00 44.19 4.81
2211 4480 3.223674 TCTTTCTGAAAAGGGTGTCCC 57.776 47.619 4.18 0.00 45.90 4.46
2212 4481 5.592104 TTTTCTTTCTGAAAAGGGTGTCC 57.408 39.130 4.18 0.00 46.20 4.02
2272 4561 7.914871 GCAAATGAGCTTTTAATTGGTGTTTTT 59.085 29.630 0.00 0.00 0.00 1.94
2273 4562 7.416817 GCAAATGAGCTTTTAATTGGTGTTTT 58.583 30.769 0.00 0.00 0.00 2.43
2275 4564 5.469760 GGCAAATGAGCTTTTAATTGGTGTT 59.530 36.000 0.00 0.00 34.17 3.32
2276 4565 4.996758 GGCAAATGAGCTTTTAATTGGTGT 59.003 37.500 0.00 0.00 34.17 4.16
2277 4566 4.091800 CGGCAAATGAGCTTTTAATTGGTG 59.908 41.667 0.00 0.00 34.17 4.17
2278 4567 4.244862 CGGCAAATGAGCTTTTAATTGGT 58.755 39.130 0.00 0.00 34.17 3.67
2279 4568 3.062504 GCGGCAAATGAGCTTTTAATTGG 59.937 43.478 0.00 0.00 34.17 3.16
2280 4569 3.679025 TGCGGCAAATGAGCTTTTAATTG 59.321 39.130 0.00 0.00 34.17 2.32
2307 5003 4.419522 TTTGAAAATAAGTGCCGAGAGC 57.580 40.909 0.00 0.00 44.14 4.09
2308 5004 6.428385 AGATTTGAAAATAAGTGCCGAGAG 57.572 37.500 0.00 0.00 0.00 3.20
2309 5005 6.206634 ACAAGATTTGAAAATAAGTGCCGAGA 59.793 34.615 0.00 0.00 0.00 4.04
2310 5006 6.381801 ACAAGATTTGAAAATAAGTGCCGAG 58.618 36.000 0.00 0.00 0.00 4.63
2311 5007 6.325919 ACAAGATTTGAAAATAAGTGCCGA 57.674 33.333 0.00 0.00 0.00 5.54
2312 5008 7.406799 AAACAAGATTTGAAAATAAGTGCCG 57.593 32.000 0.00 0.00 0.00 5.69
2322 5018 9.195411 CTTAGCATGCTAAAACAAGATTTGAAA 57.805 29.630 33.51 13.46 37.97 2.69
2323 5019 7.814107 CCTTAGCATGCTAAAACAAGATTTGAA 59.186 33.333 33.51 14.04 37.97 2.69
2324 5020 7.039784 ACCTTAGCATGCTAAAACAAGATTTGA 60.040 33.333 33.51 12.88 37.97 2.69
2326 5022 7.232118 ACCTTAGCATGCTAAAACAAGATTT 57.768 32.000 33.51 13.42 37.97 2.17
2328 5024 6.840780 AACCTTAGCATGCTAAAACAAGAT 57.159 33.333 33.51 14.08 37.97 2.40
2330 5026 7.145932 ACTAACCTTAGCATGCTAAAACAAG 57.854 36.000 33.51 28.07 37.97 3.16
2331 5027 6.128391 CGACTAACCTTAGCATGCTAAAACAA 60.128 38.462 33.51 20.97 37.97 2.83
2332 5028 5.350365 CGACTAACCTTAGCATGCTAAAACA 59.650 40.000 33.51 20.43 37.97 2.83
2333 5029 5.220605 CCGACTAACCTTAGCATGCTAAAAC 60.221 44.000 33.51 19.89 37.97 2.43
2334 5030 4.873827 CCGACTAACCTTAGCATGCTAAAA 59.126 41.667 33.51 19.71 37.97 1.52
2335 5031 4.160814 TCCGACTAACCTTAGCATGCTAAA 59.839 41.667 33.51 21.32 37.97 1.85
2336 5032 3.702548 TCCGACTAACCTTAGCATGCTAA 59.297 43.478 32.44 32.44 37.06 3.09
2337 5033 3.293337 TCCGACTAACCTTAGCATGCTA 58.707 45.455 23.52 23.52 34.09 3.49
2338 5034 2.101582 CTCCGACTAACCTTAGCATGCT 59.898 50.000 25.99 25.99 34.09 3.79
2339 5035 2.159085 ACTCCGACTAACCTTAGCATGC 60.159 50.000 10.51 10.51 34.09 4.06
2341 5037 3.097614 ACACTCCGACTAACCTTAGCAT 58.902 45.455 0.00 0.00 34.09 3.79
2342 5038 2.230508 CACACTCCGACTAACCTTAGCA 59.769 50.000 0.00 0.00 34.09 3.49
2343 5039 2.230750 ACACACTCCGACTAACCTTAGC 59.769 50.000 0.00 0.00 34.09 3.09
2344 5040 3.425892 CGACACACTCCGACTAACCTTAG 60.426 52.174 0.00 0.00 36.82 2.18
2345 5041 2.485426 CGACACACTCCGACTAACCTTA 59.515 50.000 0.00 0.00 0.00 2.69
2346 5042 1.268899 CGACACACTCCGACTAACCTT 59.731 52.381 0.00 0.00 0.00 3.50
2347 5043 0.879765 CGACACACTCCGACTAACCT 59.120 55.000 0.00 0.00 0.00 3.50
2348 5044 0.731855 GCGACACACTCCGACTAACC 60.732 60.000 0.00 0.00 0.00 2.85
2349 5045 0.240411 AGCGACACACTCCGACTAAC 59.760 55.000 0.00 0.00 0.00 2.34
2350 5046 0.956633 AAGCGACACACTCCGACTAA 59.043 50.000 0.00 0.00 0.00 2.24
2352 5048 1.174783 ATAAGCGACACACTCCGACT 58.825 50.000 0.00 0.00 0.00 4.18
2353 5049 2.838386 TATAAGCGACACACTCCGAC 57.162 50.000 0.00 0.00 0.00 4.79
2354 5050 2.686405 ACATATAAGCGACACACTCCGA 59.314 45.455 0.00 0.00 0.00 4.55
2355 5051 3.079960 ACATATAAGCGACACACTCCG 57.920 47.619 0.00 0.00 0.00 4.63
2356 5052 4.386049 GCATACATATAAGCGACACACTCC 59.614 45.833 0.00 0.00 0.00 3.85
2358 5054 4.745125 GTGCATACATATAAGCGACACACT 59.255 41.667 0.00 0.00 0.00 3.55
2360 5056 4.944048 AGTGCATACATATAAGCGACACA 58.056 39.130 0.00 0.00 0.00 3.72
2361 5057 5.333339 CCAAGTGCATACATATAAGCGACAC 60.333 44.000 0.00 0.00 0.00 3.67
2364 5060 3.745975 GCCAAGTGCATACATATAAGCGA 59.254 43.478 0.00 0.00 40.77 4.93
2365 5061 4.070581 GCCAAGTGCATACATATAAGCG 57.929 45.455 0.00 0.00 40.77 4.68
2384 5080 9.744468 AAATTATCTACGTATTTTGGATTTGCC 57.256 29.630 0.00 0.00 37.10 4.52
2397 5093 9.062524 CCATTCCCAATGAAAATTATCTACGTA 57.937 33.333 0.00 0.00 41.46 3.57
2398 5094 7.777910 TCCATTCCCAATGAAAATTATCTACGT 59.222 33.333 0.00 0.00 41.46 3.57
2399 5095 8.165239 TCCATTCCCAATGAAAATTATCTACG 57.835 34.615 0.00 0.00 41.46 3.51
2400 5096 9.971922 CTTCCATTCCCAATGAAAATTATCTAC 57.028 33.333 0.00 0.00 41.46 2.59
2401 5097 9.146586 CCTTCCATTCCCAATGAAAATTATCTA 57.853 33.333 0.00 0.00 41.46 1.98
2402 5098 7.845800 TCCTTCCATTCCCAATGAAAATTATCT 59.154 33.333 0.00 0.00 41.46 1.98
2403 5099 8.021898 TCCTTCCATTCCCAATGAAAATTATC 57.978 34.615 0.00 0.00 41.46 1.75
2404 5100 7.993349 TCCTTCCATTCCCAATGAAAATTAT 57.007 32.000 0.00 0.00 41.46 1.28
2405 5101 7.805083 TTCCTTCCATTCCCAATGAAAATTA 57.195 32.000 0.00 0.00 41.46 1.40
2406 5102 6.700845 TTCCTTCCATTCCCAATGAAAATT 57.299 33.333 0.00 0.00 41.46 1.82
2407 5103 6.700845 TTTCCTTCCATTCCCAATGAAAAT 57.299 33.333 0.00 0.00 41.46 1.82
2408 5104 6.044171 ACATTTCCTTCCATTCCCAATGAAAA 59.956 34.615 0.00 0.00 41.46 2.29
2409 5105 5.547276 ACATTTCCTTCCATTCCCAATGAAA 59.453 36.000 0.00 0.00 41.46 2.69
2410 5106 5.092968 ACATTTCCTTCCATTCCCAATGAA 58.907 37.500 0.00 0.00 41.46 2.57
2411 5107 4.686891 ACATTTCCTTCCATTCCCAATGA 58.313 39.130 0.00 0.00 41.46 2.57
2412 5108 4.467082 TGACATTTCCTTCCATTCCCAATG 59.533 41.667 0.00 0.00 38.63 2.82
2413 5109 4.686891 TGACATTTCCTTCCATTCCCAAT 58.313 39.130 0.00 0.00 0.00 3.16
2414 5110 4.088634 CTGACATTTCCTTCCATTCCCAA 58.911 43.478 0.00 0.00 0.00 4.12
2415 5111 3.075882 ACTGACATTTCCTTCCATTCCCA 59.924 43.478 0.00 0.00 0.00 4.37
2416 5112 3.696548 GACTGACATTTCCTTCCATTCCC 59.303 47.826 0.00 0.00 0.00 3.97
2417 5113 4.593956 AGACTGACATTTCCTTCCATTCC 58.406 43.478 0.00 0.00 0.00 3.01
2418 5114 5.248640 TGAGACTGACATTTCCTTCCATTC 58.751 41.667 0.00 0.00 0.00 2.67
2419 5115 5.246981 TGAGACTGACATTTCCTTCCATT 57.753 39.130 0.00 0.00 0.00 3.16
2420 5116 4.324099 CCTGAGACTGACATTTCCTTCCAT 60.324 45.833 0.00 0.00 0.00 3.41
2421 5117 3.008375 CCTGAGACTGACATTTCCTTCCA 59.992 47.826 0.00 0.00 0.00 3.53
2422 5118 3.261897 TCCTGAGACTGACATTTCCTTCC 59.738 47.826 0.00 0.00 0.00 3.46
2423 5119 4.543590 TCCTGAGACTGACATTTCCTTC 57.456 45.455 0.00 0.00 0.00 3.46
2424 5120 4.982241 TTCCTGAGACTGACATTTCCTT 57.018 40.909 0.00 0.00 0.00 3.36
2425 5121 4.982241 TTTCCTGAGACTGACATTTCCT 57.018 40.909 0.00 0.00 0.00 3.36
2426 5122 7.872113 ATAATTTCCTGAGACTGACATTTCC 57.128 36.000 0.00 0.00 0.00 3.13
2429 5125 9.911788 ACATAATAATTTCCTGAGACTGACATT 57.088 29.630 0.00 0.00 0.00 2.71
2430 5126 9.334947 CACATAATAATTTCCTGAGACTGACAT 57.665 33.333 0.00 0.00 0.00 3.06
2431 5127 7.770433 CCACATAATAATTTCCTGAGACTGACA 59.230 37.037 0.00 0.00 0.00 3.58
2432 5128 7.227512 CCCACATAATAATTTCCTGAGACTGAC 59.772 40.741 0.00 0.00 0.00 3.51
2433 5129 7.092444 ACCCACATAATAATTTCCTGAGACTGA 60.092 37.037 0.00 0.00 0.00 3.41
2434 5130 7.012704 CACCCACATAATAATTTCCTGAGACTG 59.987 40.741 0.00 0.00 0.00 3.51
2435 5131 7.056635 CACCCACATAATAATTTCCTGAGACT 58.943 38.462 0.00 0.00 0.00 3.24
2436 5132 6.828785 ACACCCACATAATAATTTCCTGAGAC 59.171 38.462 0.00 0.00 0.00 3.36
2437 5133 6.969043 ACACCCACATAATAATTTCCTGAGA 58.031 36.000 0.00 0.00 0.00 3.27
2438 5134 8.746052 TTACACCCACATAATAATTTCCTGAG 57.254 34.615 0.00 0.00 0.00 3.35
2439 5135 9.707957 ATTTACACCCACATAATAATTTCCTGA 57.292 29.630 0.00 0.00 0.00 3.86
2440 5136 9.965824 GATTTACACCCACATAATAATTTCCTG 57.034 33.333 0.00 0.00 0.00 3.86
2441 5137 9.707957 TGATTTACACCCACATAATAATTTCCT 57.292 29.630 0.00 0.00 0.00 3.36
2442 5138 9.965824 CTGATTTACACCCACATAATAATTTCC 57.034 33.333 0.00 0.00 0.00 3.13
2445 5141 9.693739 TGACTGATTTACACCCACATAATAATT 57.306 29.630 0.00 0.00 0.00 1.40
2446 5142 9.693739 TTGACTGATTTACACCCACATAATAAT 57.306 29.630 0.00 0.00 0.00 1.28
2447 5143 9.521841 TTTGACTGATTTACACCCACATAATAA 57.478 29.630 0.00 0.00 0.00 1.40
2448 5144 9.693739 ATTTGACTGATTTACACCCACATAATA 57.306 29.630 0.00 0.00 0.00 0.98
2449 5145 8.593945 ATTTGACTGATTTACACCCACATAAT 57.406 30.769 0.00 0.00 0.00 1.28
2450 5146 8.415950 AATTTGACTGATTTACACCCACATAA 57.584 30.769 0.00 0.00 0.00 1.90
2451 5147 9.693739 ATAATTTGACTGATTTACACCCACATA 57.306 29.630 0.00 0.00 0.00 2.29
2452 5148 6.916360 AATTTGACTGATTTACACCCACAT 57.084 33.333 0.00 0.00 0.00 3.21
2453 5149 7.122055 GGATAATTTGACTGATTTACACCCACA 59.878 37.037 0.00 0.00 0.00 4.17
2454 5150 7.416326 GGGATAATTTGACTGATTTACACCCAC 60.416 40.741 0.00 0.00 0.00 4.61
2455 5151 6.605594 GGGATAATTTGACTGATTTACACCCA 59.394 38.462 0.00 0.00 0.00 4.51
2456 5152 6.833933 AGGGATAATTTGACTGATTTACACCC 59.166 38.462 0.00 0.00 0.00 4.61
2457 5153 7.254795 CGAGGGATAATTTGACTGATTTACACC 60.255 40.741 0.00 0.00 0.00 4.16
2458 5154 7.630924 CGAGGGATAATTTGACTGATTTACAC 58.369 38.462 0.00 0.00 0.00 2.90
2459 5155 6.260050 GCGAGGGATAATTTGACTGATTTACA 59.740 38.462 0.00 0.00 0.00 2.41
2460 5156 6.260050 TGCGAGGGATAATTTGACTGATTTAC 59.740 38.462 0.00 0.00 0.00 2.01
2461 5157 6.353323 TGCGAGGGATAATTTGACTGATTTA 58.647 36.000 0.00 0.00 0.00 1.40
2462 5158 5.192927 TGCGAGGGATAATTTGACTGATTT 58.807 37.500 0.00 0.00 0.00 2.17
2463 5159 4.780815 TGCGAGGGATAATTTGACTGATT 58.219 39.130 0.00 0.00 0.00 2.57
2464 5160 4.422073 TGCGAGGGATAATTTGACTGAT 57.578 40.909 0.00 0.00 0.00 2.90
2465 5161 3.904800 TGCGAGGGATAATTTGACTGA 57.095 42.857 0.00 0.00 0.00 3.41
2466 5162 4.963276 TTTGCGAGGGATAATTTGACTG 57.037 40.909 0.00 0.00 0.00 3.51
2467 5163 5.975693 TTTTTGCGAGGGATAATTTGACT 57.024 34.783 0.00 0.00 0.00 3.41
2491 5187 6.250527 GCGCGTGTATAATTTGACTGATTTTT 59.749 34.615 8.43 0.00 0.00 1.94
2492 5188 5.737290 GCGCGTGTATAATTTGACTGATTTT 59.263 36.000 8.43 0.00 0.00 1.82
2493 5189 5.163804 TGCGCGTGTATAATTTGACTGATTT 60.164 36.000 8.43 0.00 0.00 2.17
2494 5190 4.331443 TGCGCGTGTATAATTTGACTGATT 59.669 37.500 8.43 0.00 0.00 2.57
2495 5191 3.868661 TGCGCGTGTATAATTTGACTGAT 59.131 39.130 8.43 0.00 0.00 2.90
2496 5192 3.061563 GTGCGCGTGTATAATTTGACTGA 59.938 43.478 8.43 0.00 0.00 3.41
2497 5193 3.062099 AGTGCGCGTGTATAATTTGACTG 59.938 43.478 8.43 0.00 0.00 3.51
2498 5194 3.259064 AGTGCGCGTGTATAATTTGACT 58.741 40.909 8.43 0.00 0.00 3.41
2499 5195 3.651562 AGTGCGCGTGTATAATTTGAC 57.348 42.857 8.43 0.00 0.00 3.18
2500 5196 4.426416 ACTAGTGCGCGTGTATAATTTGA 58.574 39.130 8.43 0.00 0.00 2.69
2501 5197 4.503007 AGACTAGTGCGCGTGTATAATTTG 59.497 41.667 8.43 0.00 0.00 2.32
2502 5198 4.679662 AGACTAGTGCGCGTGTATAATTT 58.320 39.130 8.43 0.00 0.00 1.82
2503 5199 4.201980 TGAGACTAGTGCGCGTGTATAATT 60.202 41.667 8.43 0.00 0.00 1.40
2504 5200 3.314357 TGAGACTAGTGCGCGTGTATAAT 59.686 43.478 8.43 0.00 0.00 1.28
2505 5201 2.679336 TGAGACTAGTGCGCGTGTATAA 59.321 45.455 8.43 0.00 0.00 0.98
2506 5202 2.282407 TGAGACTAGTGCGCGTGTATA 58.718 47.619 8.43 0.00 0.00 1.47
2507 5203 1.092348 TGAGACTAGTGCGCGTGTAT 58.908 50.000 8.43 0.00 0.00 2.29
2508 5204 0.876399 TTGAGACTAGTGCGCGTGTA 59.124 50.000 8.43 0.00 0.00 2.90
2509 5205 0.663568 GTTGAGACTAGTGCGCGTGT 60.664 55.000 8.43 0.00 0.00 4.49
2510 5206 0.387367 AGTTGAGACTAGTGCGCGTG 60.387 55.000 8.43 0.00 33.32 5.34
2511 5207 0.109689 GAGTTGAGACTAGTGCGCGT 60.110 55.000 8.43 0.00 35.88 6.01
2512 5208 0.169230 AGAGTTGAGACTAGTGCGCG 59.831 55.000 0.00 0.00 35.88 6.86
2513 5209 1.200252 TGAGAGTTGAGACTAGTGCGC 59.800 52.381 0.00 0.00 35.88 6.09
2514 5210 3.238441 GTTGAGAGTTGAGACTAGTGCG 58.762 50.000 0.00 0.00 35.88 5.34
2515 5211 4.022762 TCTGTTGAGAGTTGAGACTAGTGC 60.023 45.833 0.00 0.00 35.88 4.40
2516 5212 5.697473 TCTGTTGAGAGTTGAGACTAGTG 57.303 43.478 0.00 0.00 35.88 2.74
2517 5213 5.594725 TGTTCTGTTGAGAGTTGAGACTAGT 59.405 40.000 0.00 0.00 35.88 2.57
2518 5214 6.078202 TGTTCTGTTGAGAGTTGAGACTAG 57.922 41.667 0.00 0.00 35.88 2.57
2519 5215 6.465439 TTGTTCTGTTGAGAGTTGAGACTA 57.535 37.500 0.00 0.00 35.88 2.59
2520 5216 5.344743 TTGTTCTGTTGAGAGTTGAGACT 57.655 39.130 0.00 0.00 39.32 3.24
2521 5217 5.582665 AGTTTGTTCTGTTGAGAGTTGAGAC 59.417 40.000 0.00 0.00 0.00 3.36
2522 5218 5.734720 AGTTTGTTCTGTTGAGAGTTGAGA 58.265 37.500 0.00 0.00 0.00 3.27
2524 5220 4.566759 CGAGTTTGTTCTGTTGAGAGTTGA 59.433 41.667 0.00 0.00 0.00 3.18
2526 5222 4.755411 TCGAGTTTGTTCTGTTGAGAGTT 58.245 39.130 0.00 0.00 0.00 3.01
2528 5224 4.611943 TCTCGAGTTTGTTCTGTTGAGAG 58.388 43.478 13.13 0.00 0.00 3.20
2533 5229 6.431543 TCTCTATCTCTCGAGTTTGTTCTGTT 59.568 38.462 13.13 0.00 0.00 3.16
2536 5232 6.039270 CCATCTCTATCTCTCGAGTTTGTTCT 59.961 42.308 13.13 0.00 0.00 3.01
2543 5239 5.566032 CGTCTACCATCTCTATCTCTCGAGT 60.566 48.000 13.13 0.00 0.00 4.18
2544 5240 4.862574 CGTCTACCATCTCTATCTCTCGAG 59.137 50.000 5.93 5.93 0.00 4.04
2545 5241 4.523558 TCGTCTACCATCTCTATCTCTCGA 59.476 45.833 0.00 0.00 0.00 4.04
2548 5244 5.305902 TCAGTCGTCTACCATCTCTATCTCT 59.694 44.000 0.00 0.00 0.00 3.10
2552 5248 5.298989 AGTCAGTCGTCTACCATCTCTAT 57.701 43.478 0.00 0.00 0.00 1.98
2555 5251 4.444536 ACTAGTCAGTCGTCTACCATCTC 58.555 47.826 0.00 0.00 0.00 2.75
2556 5252 4.444536 GACTAGTCAGTCGTCTACCATCT 58.555 47.826 18.20 0.00 41.79 2.90
2557 5253 4.799419 GACTAGTCAGTCGTCTACCATC 57.201 50.000 18.20 0.00 41.79 3.51
2568 5264 0.609406 TCTGCGCCAGACTAGTCAGT 60.609 55.000 24.44 1.95 35.39 3.41
2569 5265 0.100325 CTCTGCGCCAGACTAGTCAG 59.900 60.000 24.44 16.51 35.39 3.51
2570 5266 0.322546 TCTCTGCGCCAGACTAGTCA 60.323 55.000 24.44 2.60 35.39 3.41
2571 5267 1.028905 ATCTCTGCGCCAGACTAGTC 58.971 55.000 15.41 15.41 35.39 2.59
2572 5268 1.950909 GTATCTCTGCGCCAGACTAGT 59.049 52.381 4.18 0.00 35.39 2.57
2573 5269 1.069568 CGTATCTCTGCGCCAGACTAG 60.070 57.143 4.18 0.00 35.39 2.57
2574 5270 0.945099 CGTATCTCTGCGCCAGACTA 59.055 55.000 4.18 0.00 35.39 2.59
2575 5271 1.729470 CCGTATCTCTGCGCCAGACT 61.729 60.000 4.18 0.00 35.39 3.24
2578 5274 0.665670 CATCCGTATCTCTGCGCCAG 60.666 60.000 4.18 0.00 0.00 4.85
2579 5275 1.106944 TCATCCGTATCTCTGCGCCA 61.107 55.000 4.18 0.00 0.00 5.69
2580 5276 0.664767 GTCATCCGTATCTCTGCGCC 60.665 60.000 4.18 0.00 0.00 6.53
2581 5277 0.664767 GGTCATCCGTATCTCTGCGC 60.665 60.000 0.00 0.00 0.00 6.09
2593 5289 1.233019 CATGATCTTGCCGGTCATCC 58.767 55.000 1.90 0.00 30.57 3.51
2595 5291 2.711711 GCATGATCTTGCCGGTCAT 58.288 52.632 20.10 0.08 36.60 3.06
2596 5292 4.223800 GCATGATCTTGCCGGTCA 57.776 55.556 20.10 0.00 36.60 4.02
2604 5300 2.425392 GGGGAAGAATGGGCATGATCTT 60.425 50.000 0.00 0.00 34.96 2.40
2605 5301 1.146566 GGGGAAGAATGGGCATGATCT 59.853 52.381 0.00 0.00 0.00 2.75
2608 5304 0.709397 TTGGGGAAGAATGGGCATGA 59.291 50.000 0.00 0.00 0.00 3.07
2609 5305 1.117150 CTTGGGGAAGAATGGGCATG 58.883 55.000 0.00 0.00 0.00 4.06
2610 5306 1.009997 TCTTGGGGAAGAATGGGCAT 58.990 50.000 0.00 0.00 0.00 4.40
2611 5307 0.332632 CTCTTGGGGAAGAATGGGCA 59.667 55.000 0.00 0.00 0.00 5.36
2613 5309 0.396278 GGCTCTTGGGGAAGAATGGG 60.396 60.000 0.00 0.00 0.00 4.00
2614 5310 0.396278 GGGCTCTTGGGGAAGAATGG 60.396 60.000 0.00 0.00 0.00 3.16
2615 5311 0.627986 AGGGCTCTTGGGGAAGAATG 59.372 55.000 0.00 0.00 0.00 2.67
2617 5313 1.553690 CGAGGGCTCTTGGGGAAGAA 61.554 60.000 0.00 0.00 0.00 2.52
2618 5314 1.990060 CGAGGGCTCTTGGGGAAGA 60.990 63.158 0.00 0.00 0.00 2.87
2619 5315 2.586792 CGAGGGCTCTTGGGGAAG 59.413 66.667 0.00 0.00 0.00 3.46
2620 5316 3.717294 GCGAGGGCTCTTGGGGAA 61.717 66.667 2.14 0.00 35.83 3.97
2623 5319 2.747855 GTTGCGAGGGCTCTTGGG 60.748 66.667 2.14 0.00 40.82 4.12
2624 5320 1.377725 ATGTTGCGAGGGCTCTTGG 60.378 57.895 2.14 0.00 40.82 3.61
2625 5321 0.957395 ACATGTTGCGAGGGCTCTTG 60.957 55.000 0.00 0.00 40.82 3.02
2626 5322 0.957395 CACATGTTGCGAGGGCTCTT 60.957 55.000 0.00 0.00 40.82 2.85
2627 5323 1.376424 CACATGTTGCGAGGGCTCT 60.376 57.895 0.00 0.00 40.82 4.09
2628 5324 0.955428 TTCACATGTTGCGAGGGCTC 60.955 55.000 0.00 0.00 40.82 4.70
2633 5404 1.136252 CCTTCGTTCACATGTTGCGAG 60.136 52.381 13.42 9.43 33.09 5.03
2638 5409 1.541147 CCATGCCTTCGTTCACATGTT 59.459 47.619 0.00 0.00 38.56 2.71
2641 5412 0.680921 CCCCATGCCTTCGTTCACAT 60.681 55.000 0.00 0.00 0.00 3.21
2643 5414 2.046285 CCCCCATGCCTTCGTTCAC 61.046 63.158 0.00 0.00 0.00 3.18
2645 5416 0.463833 CTACCCCCATGCCTTCGTTC 60.464 60.000 0.00 0.00 0.00 3.95
2650 5421 2.616893 TGCCTACCCCCATGCCTT 60.617 61.111 0.00 0.00 0.00 4.35
2655 5426 1.000359 GTTTGCTGCCTACCCCCAT 60.000 57.895 0.00 0.00 0.00 4.00
2656 5427 2.438795 GTTTGCTGCCTACCCCCA 59.561 61.111 0.00 0.00 0.00 4.96
2659 5430 1.977009 GGTGGTTTGCTGCCTACCC 60.977 63.158 15.08 8.30 0.00 3.69
2661 5432 0.537371 ACTGGTGGTTTGCTGCCTAC 60.537 55.000 0.00 0.00 0.00 3.18
2662 5433 0.184933 AACTGGTGGTTTGCTGCCTA 59.815 50.000 0.00 0.00 33.90 3.93
2663 5434 0.687427 AAACTGGTGGTTTGCTGCCT 60.687 50.000 0.00 0.00 45.29 4.75
2664 5435 1.036707 TAAACTGGTGGTTTGCTGCC 58.963 50.000 0.00 0.00 46.30 4.85
2667 5438 5.414789 AAAGTTTAAACTGGTGGTTTGCT 57.585 34.783 21.22 0.00 46.30 3.91
2668 5439 7.546316 TCTTTAAAGTTTAAACTGGTGGTTTGC 59.454 33.333 21.22 0.00 46.30 3.68
2669 5440 8.989653 TCTTTAAAGTTTAAACTGGTGGTTTG 57.010 30.769 21.22 7.75 46.30 2.93
2673 5444 9.810545 TTTGATCTTTAAAGTTTAAACTGGTGG 57.189 29.630 21.22 10.85 39.66 4.61
2676 5447 9.528018 TGCTTTGATCTTTAAAGTTTAAACTGG 57.472 29.630 21.22 9.62 39.66 4.00
2685 5456 8.641541 TCCATTCTTTGCTTTGATCTTTAAAGT 58.358 29.630 14.74 2.83 37.44 2.66
2686 5457 9.480053 TTCCATTCTTTGCTTTGATCTTTAAAG 57.520 29.630 9.04 9.04 38.00 1.85
2687 5458 9.260002 GTTCCATTCTTTGCTTTGATCTTTAAA 57.740 29.630 0.00 0.00 0.00 1.52
2688 5459 8.420222 TGTTCCATTCTTTGCTTTGATCTTTAA 58.580 29.630 0.00 0.00 0.00 1.52
2689 5460 7.867403 GTGTTCCATTCTTTGCTTTGATCTTTA 59.133 33.333 0.00 0.00 0.00 1.85
2690 5461 6.703165 GTGTTCCATTCTTTGCTTTGATCTTT 59.297 34.615 0.00 0.00 0.00 2.52
2692 5463 5.537674 AGTGTTCCATTCTTTGCTTTGATCT 59.462 36.000 0.00 0.00 0.00 2.75
2693 5464 5.776744 AGTGTTCCATTCTTTGCTTTGATC 58.223 37.500 0.00 0.00 0.00 2.92
2694 5465 5.796424 AGTGTTCCATTCTTTGCTTTGAT 57.204 34.783 0.00 0.00 0.00 2.57
2695 5466 5.827797 AGTAGTGTTCCATTCTTTGCTTTGA 59.172 36.000 0.00 0.00 0.00 2.69
2698 5469 4.022849 GCAGTAGTGTTCCATTCTTTGCTT 60.023 41.667 0.00 0.00 0.00 3.91
2699 5470 3.503748 GCAGTAGTGTTCCATTCTTTGCT 59.496 43.478 0.00 0.00 0.00 3.91
2700 5471 3.503748 AGCAGTAGTGTTCCATTCTTTGC 59.496 43.478 0.00 0.00 0.00 3.68
2701 5472 4.756642 TCAGCAGTAGTGTTCCATTCTTTG 59.243 41.667 0.00 0.00 0.00 2.77
2703 5474 4.040952 AGTCAGCAGTAGTGTTCCATTCTT 59.959 41.667 0.00 0.00 0.00 2.52
2704 5475 3.580458 AGTCAGCAGTAGTGTTCCATTCT 59.420 43.478 0.00 0.00 0.00 2.40
2705 5476 3.931578 AGTCAGCAGTAGTGTTCCATTC 58.068 45.455 0.00 0.00 0.00 2.67
2708 5479 4.521130 CTAAGTCAGCAGTAGTGTTCCA 57.479 45.455 0.00 0.00 0.00 3.53
2743 5514 2.975732 TAGCAAGAGAGGCATGTCTG 57.024 50.000 3.48 0.00 0.00 3.51
2746 5526 1.407989 GGCTTAGCAAGAGAGGCATGT 60.408 52.381 6.53 0.00 36.15 3.21
2760 5540 1.675641 GCAGGTGGTGGTGGCTTAG 60.676 63.158 0.00 0.00 0.00 2.18
2771 5551 2.033757 AGAAGCAGCAGCAGGTGG 59.966 61.111 10.46 0.00 45.49 4.61
2772 5552 2.039405 GGAGAAGCAGCAGCAGGTG 61.039 63.158 3.17 3.63 45.49 4.00
2773 5553 2.182732 GAGGAGAAGCAGCAGCAGGT 62.183 60.000 3.17 0.00 45.49 4.00
2774 5554 1.449956 GAGGAGAAGCAGCAGCAGG 60.450 63.158 3.17 0.00 45.49 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.