Multiple sequence alignment - TraesCS3B01G294100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G294100 chr3B 100.000 2573 0 0 1 2573 473178171 473180743 0.000000e+00 4752
1 TraesCS3B01G294100 chr6B 96.858 1082 33 1 534 1614 610080871 610081952 0.000000e+00 1808
2 TraesCS3B01G294100 chr5A 96.849 1079 33 1 537 1614 496035294 496034216 0.000000e+00 1803
3 TraesCS3B01G294100 chr7B 96.679 1084 35 1 534 1616 570375357 570376440 0.000000e+00 1801
4 TraesCS3B01G294100 chr2A 95.291 1083 50 1 534 1615 8389642 8390724 0.000000e+00 1716
5 TraesCS3B01G294100 chr3A 95.102 1082 51 2 534 1614 227370214 227371294 0.000000e+00 1703
6 TraesCS3B01G294100 chr3A 92.441 463 16 9 73 520 484101663 484102121 0.000000e+00 643
7 TraesCS3B01G294100 chr3A 85.103 584 51 13 2016 2570 484102121 484102697 4.810000e-157 564
8 TraesCS3B01G294100 chr3A 95.714 70 2 1 1 70 484101566 484101634 7.530000e-21 111
9 TraesCS3B01G294100 chr1D 95.023 1085 50 2 534 1614 411518654 411519738 0.000000e+00 1701
10 TraesCS3B01G294100 chr1D 89.539 889 89 4 542 1428 268032280 268031394 0.000000e+00 1123
11 TraesCS3B01G294100 chr4A 94.722 1080 47 3 537 1614 742706672 742707743 0.000000e+00 1670
12 TraesCS3B01G294100 chr5B 94.712 1078 42 5 537 1614 679005336 679004274 0.000000e+00 1661
13 TraesCS3B01G294100 chr7A 94.183 1083 59 4 534 1615 52660954 52662033 0.000000e+00 1648
14 TraesCS3B01G294100 chr3D 92.424 462 30 2 78 534 363264653 363265114 0.000000e+00 654
15 TraesCS3B01G294100 chr3D 83.333 678 79 16 1843 2497 363265526 363266192 1.700000e-166 595
16 TraesCS3B01G294100 chr3D 97.500 80 1 1 1 80 363264536 363264614 4.470000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G294100 chr3B 473178171 473180743 2572 False 4752.000000 4752 100.000000 1 2573 1 chr3B.!!$F1 2572
1 TraesCS3B01G294100 chr6B 610080871 610081952 1081 False 1808.000000 1808 96.858000 534 1614 1 chr6B.!!$F1 1080
2 TraesCS3B01G294100 chr5A 496034216 496035294 1078 True 1803.000000 1803 96.849000 537 1614 1 chr5A.!!$R1 1077
3 TraesCS3B01G294100 chr7B 570375357 570376440 1083 False 1801.000000 1801 96.679000 534 1616 1 chr7B.!!$F1 1082
4 TraesCS3B01G294100 chr2A 8389642 8390724 1082 False 1716.000000 1716 95.291000 534 1615 1 chr2A.!!$F1 1081
5 TraesCS3B01G294100 chr3A 227370214 227371294 1080 False 1703.000000 1703 95.102000 534 1614 1 chr3A.!!$F1 1080
6 TraesCS3B01G294100 chr3A 484101566 484102697 1131 False 439.333333 643 91.086000 1 2570 3 chr3A.!!$F2 2569
7 TraesCS3B01G294100 chr1D 411518654 411519738 1084 False 1701.000000 1701 95.023000 534 1614 1 chr1D.!!$F1 1080
8 TraesCS3B01G294100 chr1D 268031394 268032280 886 True 1123.000000 1123 89.539000 542 1428 1 chr1D.!!$R1 886
9 TraesCS3B01G294100 chr4A 742706672 742707743 1071 False 1670.000000 1670 94.722000 537 1614 1 chr4A.!!$F1 1077
10 TraesCS3B01G294100 chr5B 679004274 679005336 1062 True 1661.000000 1661 94.712000 537 1614 1 chr5B.!!$R1 1077
11 TraesCS3B01G294100 chr7A 52660954 52662033 1079 False 1648.000000 1648 94.183000 534 1615 1 chr7A.!!$F1 1081
12 TraesCS3B01G294100 chr3D 363264536 363266192 1656 False 461.333333 654 91.085667 1 2497 3 chr3D.!!$F1 2496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
442 527 0.681733 CTATCCCCACCTGGACGATG 59.318 60.0 0.0 0.0 37.2 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1659 2239 0.099436 GCTTAAAGCAGACATGGCCG 59.901 55.0 0.0 0.0 41.89 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.552684 CCAGAAATTTCGGCAAAGAAGCA 60.553 43.478 12.42 0.00 35.83 3.91
89 157 6.624352 TGCCTTGTCTAGATGATTTATTGC 57.376 37.500 0.00 0.00 0.00 3.56
128 205 6.978080 CCAAAAATAAAGCCGCATTACTGTAT 59.022 34.615 0.00 0.00 0.00 2.29
129 206 7.167468 CCAAAAATAAAGCCGCATTACTGTATC 59.833 37.037 0.00 0.00 0.00 2.24
151 228 2.919772 TACCTCTCCCATCACTGTCA 57.080 50.000 0.00 0.00 0.00 3.58
180 257 3.695830 AACACTGGTAGTGGTATGGTG 57.304 47.619 12.98 0.00 45.86 4.17
217 294 5.047802 TCTCATGGAAAGCTGGTGAAAATTC 60.048 40.000 0.00 0.00 0.00 2.17
223 300 2.427506 AGCTGGTGAAAATTCCGAGTC 58.572 47.619 0.00 0.00 0.00 3.36
335 414 6.692232 ACAACGTCTTAATTCTCTCTTTCG 57.308 37.500 0.00 0.00 0.00 3.46
361 440 5.127194 TGAGAGGCCACTGTAATTACTAGTG 59.873 44.000 25.49 25.49 41.04 2.74
409 494 1.003331 CACGGCGAGCAGTTAACAAAA 60.003 47.619 16.62 0.00 0.00 2.44
442 527 0.681733 CTATCCCCACCTGGACGATG 59.318 60.000 0.00 0.00 37.20 3.84
480 565 1.391157 AAAACAGCAGCCTGCCGAAA 61.391 50.000 14.25 0.00 46.52 3.46
481 566 1.799258 AAACAGCAGCCTGCCGAAAG 61.799 55.000 14.25 1.08 46.52 2.62
492 577 4.426313 CCGAAAGGTGCCCCCTCC 62.426 72.222 0.00 0.00 45.47 4.30
493 578 4.778143 CGAAAGGTGCCCCCTCCG 62.778 72.222 0.00 0.00 45.47 4.63
494 579 3.327404 GAAAGGTGCCCCCTCCGA 61.327 66.667 0.00 0.00 45.47 4.55
495 580 2.856988 AAAGGTGCCCCCTCCGAA 60.857 61.111 0.00 0.00 45.47 4.30
496 581 2.211468 GAAAGGTGCCCCCTCCGAAT 62.211 60.000 0.00 0.00 45.47 3.34
497 582 2.211468 AAAGGTGCCCCCTCCGAATC 62.211 60.000 0.00 0.00 45.47 2.52
498 583 4.191015 GGTGCCCCCTCCGAATCC 62.191 72.222 0.00 0.00 0.00 3.01
499 584 3.407967 GTGCCCCCTCCGAATCCA 61.408 66.667 0.00 0.00 0.00 3.41
500 585 2.612430 TGCCCCCTCCGAATCCAA 60.612 61.111 0.00 0.00 0.00 3.53
501 586 2.006415 TGCCCCCTCCGAATCCAAT 61.006 57.895 0.00 0.00 0.00 3.16
502 587 1.228276 GCCCCCTCCGAATCCAATC 60.228 63.158 0.00 0.00 0.00 2.67
503 588 1.456287 CCCCCTCCGAATCCAATCC 59.544 63.158 0.00 0.00 0.00 3.01
504 589 1.062488 CCCCCTCCGAATCCAATCCT 61.062 60.000 0.00 0.00 0.00 3.24
505 590 1.729586 CCCCTCCGAATCCAATCCTA 58.270 55.000 0.00 0.00 0.00 2.94
506 591 1.625818 CCCCTCCGAATCCAATCCTAG 59.374 57.143 0.00 0.00 0.00 3.02
507 592 2.330216 CCCTCCGAATCCAATCCTAGT 58.670 52.381 0.00 0.00 0.00 2.57
508 593 2.706190 CCCTCCGAATCCAATCCTAGTT 59.294 50.000 0.00 0.00 0.00 2.24
509 594 3.136626 CCCTCCGAATCCAATCCTAGTTT 59.863 47.826 0.00 0.00 0.00 2.66
510 595 4.385310 CCCTCCGAATCCAATCCTAGTTTT 60.385 45.833 0.00 0.00 0.00 2.43
511 596 4.576463 CCTCCGAATCCAATCCTAGTTTTG 59.424 45.833 0.00 0.00 0.00 2.44
512 597 4.523083 TCCGAATCCAATCCTAGTTTTGG 58.477 43.478 12.58 12.58 43.10 3.28
517 602 4.591321 TCCAATCCTAGTTTTGGAGCAT 57.409 40.909 15.97 0.00 44.92 3.79
518 603 4.526970 TCCAATCCTAGTTTTGGAGCATC 58.473 43.478 15.97 0.00 44.92 3.91
519 604 4.018506 TCCAATCCTAGTTTTGGAGCATCA 60.019 41.667 15.97 0.00 44.92 3.07
520 605 4.337555 CCAATCCTAGTTTTGGAGCATCAG 59.662 45.833 13.24 0.00 44.23 2.90
521 606 3.634397 TCCTAGTTTTGGAGCATCAGG 57.366 47.619 0.00 0.00 36.25 3.86
522 607 2.239654 TCCTAGTTTTGGAGCATCAGGG 59.760 50.000 0.00 0.00 36.25 4.45
523 608 2.239654 CCTAGTTTTGGAGCATCAGGGA 59.760 50.000 0.00 0.00 36.25 4.20
524 609 2.978156 AGTTTTGGAGCATCAGGGAA 57.022 45.000 0.00 0.00 36.25 3.97
525 610 3.463048 AGTTTTGGAGCATCAGGGAAT 57.537 42.857 0.00 0.00 36.25 3.01
526 611 3.359950 AGTTTTGGAGCATCAGGGAATC 58.640 45.455 0.00 0.00 36.25 2.52
527 612 3.091545 GTTTTGGAGCATCAGGGAATCA 58.908 45.455 0.00 0.00 36.25 2.57
528 613 3.454719 TTTGGAGCATCAGGGAATCAA 57.545 42.857 0.00 0.00 36.25 2.57
529 614 2.425143 TGGAGCATCAGGGAATCAAC 57.575 50.000 0.00 0.00 36.25 3.18
530 615 1.634973 TGGAGCATCAGGGAATCAACA 59.365 47.619 0.00 0.00 36.25 3.33
531 616 2.295885 GGAGCATCAGGGAATCAACAG 58.704 52.381 0.00 0.00 36.25 3.16
532 617 1.674962 GAGCATCAGGGAATCAACAGC 59.325 52.381 0.00 0.00 33.17 4.40
535 620 0.749454 ATCAGGGAATCAACAGCCGC 60.749 55.000 0.00 0.00 0.00 6.53
591 676 2.421399 GGCAATCCCAAGCTCCAGC 61.421 63.158 0.00 0.00 42.49 4.85
824 925 5.010516 TGGGCATATTGGAAATTATTGACGG 59.989 40.000 0.00 0.00 0.00 4.79
907 1008 1.937546 GCCAGTTCCAATGAAGCCGG 61.938 60.000 0.00 0.00 0.00 6.13
945 1046 7.164230 ACAAATTCTTGTTGTTGGTAGTTGA 57.836 32.000 0.00 0.00 43.45 3.18
991 1092 2.815503 CACACTCATGATGGAGCAACAA 59.184 45.455 0.00 0.00 38.50 2.83
1528 2108 0.399949 ATGGACTTATGAGCCCCCGA 60.400 55.000 0.00 0.00 0.00 5.14
1631 2211 3.850122 AAAGGCGCACTTAAGAAATCC 57.150 42.857 10.83 5.11 38.85 3.01
1632 2212 1.369625 AGGCGCACTTAAGAAATCCG 58.630 50.000 10.83 5.24 0.00 4.18
1633 2213 1.066430 AGGCGCACTTAAGAAATCCGA 60.066 47.619 10.83 0.00 0.00 4.55
1634 2214 1.940613 GGCGCACTTAAGAAATCCGAT 59.059 47.619 10.83 0.00 0.00 4.18
1635 2215 2.032808 GGCGCACTTAAGAAATCCGATC 60.033 50.000 10.83 0.00 0.00 3.69
1636 2216 2.032808 GCGCACTTAAGAAATCCGATCC 60.033 50.000 10.09 0.00 0.00 3.36
1637 2217 3.458189 CGCACTTAAGAAATCCGATCCT 58.542 45.455 10.09 0.00 0.00 3.24
1638 2218 3.491267 CGCACTTAAGAAATCCGATCCTC 59.509 47.826 10.09 0.00 0.00 3.71
1639 2219 4.698575 GCACTTAAGAAATCCGATCCTCT 58.301 43.478 10.09 0.00 0.00 3.69
1640 2220 5.507482 CGCACTTAAGAAATCCGATCCTCTA 60.507 44.000 10.09 0.00 0.00 2.43
1641 2221 6.281405 GCACTTAAGAAATCCGATCCTCTAA 58.719 40.000 10.09 0.00 0.00 2.10
1642 2222 6.761714 GCACTTAAGAAATCCGATCCTCTAAA 59.238 38.462 10.09 0.00 0.00 1.85
1643 2223 7.254488 GCACTTAAGAAATCCGATCCTCTAAAC 60.254 40.741 10.09 0.00 0.00 2.01
1644 2224 7.224949 CACTTAAGAAATCCGATCCTCTAAACC 59.775 40.741 10.09 0.00 0.00 3.27
1645 2225 5.693769 AAGAAATCCGATCCTCTAAACCA 57.306 39.130 0.00 0.00 0.00 3.67
1646 2226 5.896073 AGAAATCCGATCCTCTAAACCAT 57.104 39.130 0.00 0.00 0.00 3.55
1647 2227 5.859495 AGAAATCCGATCCTCTAAACCATC 58.141 41.667 0.00 0.00 0.00 3.51
1648 2228 3.944055 ATCCGATCCTCTAAACCATCG 57.056 47.619 0.00 0.00 38.28 3.84
1649 2229 2.662866 TCCGATCCTCTAAACCATCGT 58.337 47.619 0.00 0.00 37.11 3.73
1650 2230 2.361119 TCCGATCCTCTAAACCATCGTG 59.639 50.000 0.00 0.00 37.11 4.35
1651 2231 2.545952 CCGATCCTCTAAACCATCGTGG 60.546 54.545 2.92 2.92 45.02 4.94
1652 2232 2.361119 CGATCCTCTAAACCATCGTGGA 59.639 50.000 10.46 0.00 40.96 4.02
1653 2233 3.718815 GATCCTCTAAACCATCGTGGAC 58.281 50.000 10.46 0.00 40.96 4.02
1654 2234 2.531771 TCCTCTAAACCATCGTGGACA 58.468 47.619 10.46 0.00 40.96 4.02
1655 2235 2.232941 TCCTCTAAACCATCGTGGACAC 59.767 50.000 10.46 0.00 40.96 3.67
1667 2247 4.388499 GGACACGTCCGGCCATGT 62.388 66.667 2.24 0.00 40.36 3.21
1668 2248 2.813908 GACACGTCCGGCCATGTC 60.814 66.667 13.71 13.71 35.12 3.06
1669 2249 3.296709 GACACGTCCGGCCATGTCT 62.297 63.158 18.93 0.00 38.72 3.41
1670 2250 2.815211 CACGTCCGGCCATGTCTG 60.815 66.667 2.24 0.00 0.00 3.51
1671 2251 4.760047 ACGTCCGGCCATGTCTGC 62.760 66.667 2.24 0.00 0.00 4.26
1672 2252 4.457496 CGTCCGGCCATGTCTGCT 62.457 66.667 2.24 0.00 0.00 4.24
1673 2253 2.045926 GTCCGGCCATGTCTGCTT 60.046 61.111 2.24 0.00 0.00 3.91
1674 2254 1.675641 GTCCGGCCATGTCTGCTTT 60.676 57.895 2.24 0.00 0.00 3.51
1675 2255 0.392461 GTCCGGCCATGTCTGCTTTA 60.392 55.000 2.24 0.00 0.00 1.85
1676 2256 0.326595 TCCGGCCATGTCTGCTTTAA 59.673 50.000 2.24 0.00 0.00 1.52
1677 2257 0.734889 CCGGCCATGTCTGCTTTAAG 59.265 55.000 2.24 0.00 0.00 1.85
1678 2258 0.099436 CGGCCATGTCTGCTTTAAGC 59.901 55.000 10.38 10.38 42.82 3.09
1679 2259 1.467920 GGCCATGTCTGCTTTAAGCT 58.532 50.000 18.20 0.00 42.97 3.74
1680 2260 1.821136 GGCCATGTCTGCTTTAAGCTT 59.179 47.619 18.20 3.48 42.97 3.74
1681 2261 2.159324 GGCCATGTCTGCTTTAAGCTTC 60.159 50.000 18.20 8.69 42.97 3.86
1682 2262 2.751806 GCCATGTCTGCTTTAAGCTTCT 59.248 45.455 18.20 0.00 42.97 2.85
1683 2263 3.941483 GCCATGTCTGCTTTAAGCTTCTA 59.059 43.478 18.20 3.08 42.97 2.10
1684 2264 4.578105 GCCATGTCTGCTTTAAGCTTCTAT 59.422 41.667 18.20 5.22 42.97 1.98
1685 2265 5.067023 GCCATGTCTGCTTTAAGCTTCTATT 59.933 40.000 18.20 0.00 42.97 1.73
1686 2266 6.405176 GCCATGTCTGCTTTAAGCTTCTATTT 60.405 38.462 18.20 0.00 42.97 1.40
1687 2267 7.201732 GCCATGTCTGCTTTAAGCTTCTATTTA 60.202 37.037 18.20 0.00 42.97 1.40
1688 2268 8.844244 CCATGTCTGCTTTAAGCTTCTATTTAT 58.156 33.333 18.20 0.02 42.97 1.40
1689 2269 9.661187 CATGTCTGCTTTAAGCTTCTATTTATG 57.339 33.333 18.20 7.95 42.97 1.90
1690 2270 7.697691 TGTCTGCTTTAAGCTTCTATTTATGC 58.302 34.615 18.20 0.00 42.97 3.14
1691 2271 6.848296 GTCTGCTTTAAGCTTCTATTTATGCG 59.152 38.462 18.20 0.00 42.97 4.73
1692 2272 6.538742 TCTGCTTTAAGCTTCTATTTATGCGT 59.461 34.615 18.20 0.00 42.97 5.24
1693 2273 7.065803 TCTGCTTTAAGCTTCTATTTATGCGTT 59.934 33.333 18.20 0.00 42.97 4.84
1694 2274 7.186804 TGCTTTAAGCTTCTATTTATGCGTTC 58.813 34.615 18.20 0.00 42.97 3.95
1695 2275 7.148323 TGCTTTAAGCTTCTATTTATGCGTTCA 60.148 33.333 18.20 0.00 42.97 3.18
1696 2276 7.857885 GCTTTAAGCTTCTATTTATGCGTTCAT 59.142 33.333 10.01 0.00 38.45 2.57
1697 2277 9.162793 CTTTAAGCTTCTATTTATGCGTTCATG 57.837 33.333 0.00 0.00 34.22 3.07
1698 2278 5.100751 AGCTTCTATTTATGCGTTCATGC 57.899 39.130 0.00 0.00 34.22 4.06
1705 2285 4.633769 TGCGTTCATGCAGCCATA 57.366 50.000 0.00 0.00 40.62 2.74
1706 2286 3.099002 TGCGTTCATGCAGCCATAT 57.901 47.368 0.00 0.00 40.62 1.78
1707 2287 1.391577 TGCGTTCATGCAGCCATATT 58.608 45.000 0.00 0.00 40.62 1.28
1708 2288 1.750206 TGCGTTCATGCAGCCATATTT 59.250 42.857 0.00 0.00 40.62 1.40
1709 2289 2.223548 TGCGTTCATGCAGCCATATTTC 60.224 45.455 0.00 0.00 40.62 2.17
1710 2290 2.223548 GCGTTCATGCAGCCATATTTCA 60.224 45.455 0.00 0.00 34.15 2.69
1711 2291 3.365832 CGTTCATGCAGCCATATTTCAC 58.634 45.455 0.00 0.00 0.00 3.18
1712 2292 3.181498 CGTTCATGCAGCCATATTTCACA 60.181 43.478 0.00 0.00 0.00 3.58
1713 2293 4.498513 CGTTCATGCAGCCATATTTCACAT 60.499 41.667 0.00 0.00 0.00 3.21
1714 2294 5.353938 GTTCATGCAGCCATATTTCACATT 58.646 37.500 0.00 0.00 0.00 2.71
1715 2295 5.601583 TCATGCAGCCATATTTCACATTT 57.398 34.783 0.00 0.00 0.00 2.32
1716 2296 5.979993 TCATGCAGCCATATTTCACATTTT 58.020 33.333 0.00 0.00 0.00 1.82
1717 2297 6.408035 TCATGCAGCCATATTTCACATTTTT 58.592 32.000 0.00 0.00 0.00 1.94
1718 2298 6.535865 TCATGCAGCCATATTTCACATTTTTC 59.464 34.615 0.00 0.00 0.00 2.29
1719 2299 6.040209 TGCAGCCATATTTCACATTTTTCT 57.960 33.333 0.00 0.00 0.00 2.52
1720 2300 6.465948 TGCAGCCATATTTCACATTTTTCTT 58.534 32.000 0.00 0.00 0.00 2.52
1721 2301 6.591062 TGCAGCCATATTTCACATTTTTCTTC 59.409 34.615 0.00 0.00 0.00 2.87
1722 2302 6.815142 GCAGCCATATTTCACATTTTTCTTCT 59.185 34.615 0.00 0.00 0.00 2.85
1723 2303 7.332678 GCAGCCATATTTCACATTTTTCTTCTT 59.667 33.333 0.00 0.00 0.00 2.52
1724 2304 9.859427 CAGCCATATTTCACATTTTTCTTCTTA 57.141 29.630 0.00 0.00 0.00 2.10
1733 2313 8.801882 TCACATTTTTCTTCTTATATTCCGGT 57.198 30.769 0.00 0.00 0.00 5.28
1734 2314 8.889717 TCACATTTTTCTTCTTATATTCCGGTC 58.110 33.333 0.00 0.00 0.00 4.79
1735 2315 8.673711 CACATTTTTCTTCTTATATTCCGGTCA 58.326 33.333 0.00 0.00 0.00 4.02
1736 2316 8.674607 ACATTTTTCTTCTTATATTCCGGTCAC 58.325 33.333 0.00 0.00 0.00 3.67
1737 2317 8.893727 CATTTTTCTTCTTATATTCCGGTCACT 58.106 33.333 0.00 0.00 0.00 3.41
1738 2318 8.857694 TTTTTCTTCTTATATTCCGGTCACTT 57.142 30.769 0.00 0.00 0.00 3.16
1739 2319 7.843490 TTTCTTCTTATATTCCGGTCACTTG 57.157 36.000 0.00 0.00 0.00 3.16
1740 2320 5.357257 TCTTCTTATATTCCGGTCACTTGC 58.643 41.667 0.00 0.00 0.00 4.01
1741 2321 4.746535 TCTTATATTCCGGTCACTTGCA 57.253 40.909 0.00 0.00 0.00 4.08
1742 2322 5.290493 TCTTATATTCCGGTCACTTGCAT 57.710 39.130 0.00 0.00 0.00 3.96
1743 2323 5.056480 TCTTATATTCCGGTCACTTGCATG 58.944 41.667 0.00 0.00 0.00 4.06
1744 2324 2.779755 TATTCCGGTCACTTGCATGT 57.220 45.000 0.00 0.00 0.00 3.21
1745 2325 1.167851 ATTCCGGTCACTTGCATGTG 58.832 50.000 23.12 23.12 39.15 3.21
1746 2326 0.107643 TTCCGGTCACTTGCATGTGA 59.892 50.000 26.52 26.52 43.72 3.58
1753 2333 3.405823 TCACTTGCATGTGACTGATGA 57.594 42.857 26.52 7.48 41.43 2.92
1754 2334 3.742385 TCACTTGCATGTGACTGATGAA 58.258 40.909 26.52 6.82 41.43 2.57
1755 2335 3.749609 TCACTTGCATGTGACTGATGAAG 59.250 43.478 26.52 1.65 41.43 3.02
1756 2336 3.749609 CACTTGCATGTGACTGATGAAGA 59.250 43.478 24.41 0.00 40.12 2.87
1757 2337 4.395231 CACTTGCATGTGACTGATGAAGAT 59.605 41.667 24.41 0.00 40.12 2.40
1758 2338 4.395231 ACTTGCATGTGACTGATGAAGATG 59.605 41.667 4.14 0.00 0.00 2.90
1759 2339 3.275999 TGCATGTGACTGATGAAGATGG 58.724 45.455 0.00 0.00 0.00 3.51
1760 2340 3.054948 TGCATGTGACTGATGAAGATGGA 60.055 43.478 0.00 0.00 0.00 3.41
1761 2341 3.560481 GCATGTGACTGATGAAGATGGAG 59.440 47.826 0.00 0.00 0.00 3.86
1762 2342 4.682589 GCATGTGACTGATGAAGATGGAGA 60.683 45.833 0.00 0.00 0.00 3.71
1763 2343 4.732672 TGTGACTGATGAAGATGGAGAG 57.267 45.455 0.00 0.00 0.00 3.20
1764 2344 4.347607 TGTGACTGATGAAGATGGAGAGA 58.652 43.478 0.00 0.00 0.00 3.10
1765 2345 4.774200 TGTGACTGATGAAGATGGAGAGAA 59.226 41.667 0.00 0.00 0.00 2.87
1766 2346 5.246883 TGTGACTGATGAAGATGGAGAGAAA 59.753 40.000 0.00 0.00 0.00 2.52
1767 2347 5.811613 GTGACTGATGAAGATGGAGAGAAAG 59.188 44.000 0.00 0.00 0.00 2.62
1768 2348 5.718607 TGACTGATGAAGATGGAGAGAAAGA 59.281 40.000 0.00 0.00 0.00 2.52
1769 2349 6.212187 TGACTGATGAAGATGGAGAGAAAGAA 59.788 38.462 0.00 0.00 0.00 2.52
1770 2350 7.013823 ACTGATGAAGATGGAGAGAAAGAAA 57.986 36.000 0.00 0.00 0.00 2.52
1771 2351 7.104939 ACTGATGAAGATGGAGAGAAAGAAAG 58.895 38.462 0.00 0.00 0.00 2.62
1772 2352 7.038445 ACTGATGAAGATGGAGAGAAAGAAAGA 60.038 37.037 0.00 0.00 0.00 2.52
1773 2353 7.683578 TGATGAAGATGGAGAGAAAGAAAGAA 58.316 34.615 0.00 0.00 0.00 2.52
1774 2354 8.159447 TGATGAAGATGGAGAGAAAGAAAGAAA 58.841 33.333 0.00 0.00 0.00 2.52
1775 2355 8.930846 ATGAAGATGGAGAGAAAGAAAGAAAA 57.069 30.769 0.00 0.00 0.00 2.29
1776 2356 8.388484 TGAAGATGGAGAGAAAGAAAGAAAAG 57.612 34.615 0.00 0.00 0.00 2.27
1777 2357 8.213679 TGAAGATGGAGAGAAAGAAAGAAAAGA 58.786 33.333 0.00 0.00 0.00 2.52
1778 2358 9.230122 GAAGATGGAGAGAAAGAAAGAAAAGAT 57.770 33.333 0.00 0.00 0.00 2.40
1780 2360 9.889128 AGATGGAGAGAAAGAAAGAAAAGATAG 57.111 33.333 0.00 0.00 0.00 2.08
1781 2361 9.883142 GATGGAGAGAAAGAAAGAAAAGATAGA 57.117 33.333 0.00 0.00 0.00 1.98
1782 2362 9.889128 ATGGAGAGAAAGAAAGAAAAGATAGAG 57.111 33.333 0.00 0.00 0.00 2.43
1783 2363 9.094578 TGGAGAGAAAGAAAGAAAAGATAGAGA 57.905 33.333 0.00 0.00 0.00 3.10
1784 2364 9.936759 GGAGAGAAAGAAAGAAAAGATAGAGAA 57.063 33.333 0.00 0.00 0.00 2.87
1805 2385 2.765689 AAATGGTTTGGAGTGGGTCA 57.234 45.000 0.00 0.00 0.00 4.02
1806 2386 1.995376 AATGGTTTGGAGTGGGTCAC 58.005 50.000 0.00 0.00 34.10 3.67
1807 2387 0.250727 ATGGTTTGGAGTGGGTCACG 60.251 55.000 0.00 0.00 39.64 4.35
1808 2388 1.147600 GGTTTGGAGTGGGTCACGT 59.852 57.895 0.00 0.00 39.64 4.49
1809 2389 0.883370 GGTTTGGAGTGGGTCACGTC 60.883 60.000 0.00 0.00 39.64 4.34
1810 2390 0.883370 GTTTGGAGTGGGTCACGTCC 60.883 60.000 0.00 8.54 39.64 4.79
1811 2391 1.052124 TTTGGAGTGGGTCACGTCCT 61.052 55.000 13.47 0.00 39.64 3.85
1812 2392 0.178955 TTGGAGTGGGTCACGTCCTA 60.179 55.000 13.47 7.07 39.64 2.94
1813 2393 0.896940 TGGAGTGGGTCACGTCCTAC 60.897 60.000 1.96 1.96 39.64 3.18
1814 2394 0.896940 GGAGTGGGTCACGTCCTACA 60.897 60.000 11.57 0.00 40.66 2.74
1815 2395 1.183549 GAGTGGGTCACGTCCTACAT 58.816 55.000 11.57 0.00 40.66 2.29
1816 2396 0.895530 AGTGGGTCACGTCCTACATG 59.104 55.000 11.57 0.00 40.66 3.21
1817 2397 0.108329 GTGGGTCACGTCCTACATGG 60.108 60.000 5.09 0.00 38.55 3.66
1818 2398 1.153429 GGGTCACGTCCTACATGGC 60.153 63.158 0.00 0.00 35.26 4.40
1819 2399 1.518572 GGTCACGTCCTACATGGCG 60.519 63.158 0.00 0.00 39.83 5.69
1820 2400 1.518572 GTCACGTCCTACATGGCGG 60.519 63.158 0.00 0.00 38.83 6.13
1821 2401 1.679641 TCACGTCCTACATGGCGGA 60.680 57.895 0.00 0.00 38.83 5.54
1822 2402 1.518572 CACGTCCTACATGGCGGAC 60.519 63.158 20.00 20.00 44.88 4.79
1823 2403 1.681327 ACGTCCTACATGGCGGACT 60.681 57.895 24.40 13.94 45.88 3.85
1824 2404 1.255667 ACGTCCTACATGGCGGACTT 61.256 55.000 24.40 17.01 45.88 3.01
1825 2405 0.742505 CGTCCTACATGGCGGACTTA 59.257 55.000 24.40 0.00 45.88 2.24
1826 2406 1.535437 CGTCCTACATGGCGGACTTAC 60.535 57.143 24.40 7.65 45.88 2.34
1827 2407 1.117150 TCCTACATGGCGGACTTACC 58.883 55.000 0.00 0.00 35.26 2.85
1836 2416 3.924507 GGACTTACCGGGCGTCTA 58.075 61.111 6.32 0.00 0.00 2.59
1837 2417 1.732308 GGACTTACCGGGCGTCTAG 59.268 63.158 6.32 0.00 0.00 2.43
1838 2418 0.749454 GGACTTACCGGGCGTCTAGA 60.749 60.000 6.32 0.00 0.00 2.43
1839 2419 1.098050 GACTTACCGGGCGTCTAGAA 58.902 55.000 6.32 0.00 0.00 2.10
1840 2420 1.065251 GACTTACCGGGCGTCTAGAAG 59.935 57.143 6.32 0.74 0.00 2.85
1841 2421 1.340405 ACTTACCGGGCGTCTAGAAGA 60.340 52.381 10.08 0.00 0.00 2.87
1842 2422 1.065251 CTTACCGGGCGTCTAGAAGAC 59.935 57.143 10.08 6.40 41.71 3.01
1843 2423 0.749454 TACCGGGCGTCTAGAAGACC 60.749 60.000 19.87 19.87 42.12 3.85
1844 2424 1.753463 CCGGGCGTCTAGAAGACCT 60.753 63.158 25.68 0.00 42.12 3.85
1845 2425 1.726533 CCGGGCGTCTAGAAGACCTC 61.727 65.000 25.68 11.30 42.12 3.85
1846 2426 1.030488 CGGGCGTCTAGAAGACCTCA 61.030 60.000 25.68 0.00 42.12 3.86
1847 2427 1.404843 GGGCGTCTAGAAGACCTCAT 58.595 55.000 22.17 0.00 42.12 2.90
1848 2428 2.584236 GGGCGTCTAGAAGACCTCATA 58.416 52.381 22.17 0.00 42.12 2.15
1849 2429 3.158676 GGGCGTCTAGAAGACCTCATAT 58.841 50.000 22.17 0.00 42.12 1.78
1850 2430 4.333690 GGGCGTCTAGAAGACCTCATATA 58.666 47.826 22.17 0.00 42.12 0.86
1851 2431 4.396790 GGGCGTCTAGAAGACCTCATATAG 59.603 50.000 22.17 0.00 42.12 1.31
1852 2432 5.005094 GGCGTCTAGAAGACCTCATATAGT 58.995 45.833 10.08 0.00 42.12 2.12
1853 2433 5.122711 GGCGTCTAGAAGACCTCATATAGTC 59.877 48.000 10.08 0.00 42.12 2.59
1854 2434 5.122711 GCGTCTAGAAGACCTCATATAGTCC 59.877 48.000 10.08 0.00 42.12 3.85
1855 2435 6.469410 CGTCTAGAAGACCTCATATAGTCCT 58.531 44.000 0.00 0.00 42.12 3.85
1856 2436 6.938030 CGTCTAGAAGACCTCATATAGTCCTT 59.062 42.308 0.00 0.00 42.12 3.36
1857 2437 8.095792 CGTCTAGAAGACCTCATATAGTCCTTA 58.904 40.741 0.00 0.00 42.12 2.69
1858 2438 9.223099 GTCTAGAAGACCTCATATAGTCCTTAC 57.777 40.741 0.00 0.00 39.28 2.34
1859 2439 8.946248 TCTAGAAGACCTCATATAGTCCTTACA 58.054 37.037 0.00 0.00 33.29 2.41
1860 2440 9.747898 CTAGAAGACCTCATATAGTCCTTACAT 57.252 37.037 0.00 0.00 33.29 2.29
1862 2442 9.440761 AGAAGACCTCATATAGTCCTTACATTT 57.559 33.333 0.00 0.00 33.29 2.32
1863 2443 9.482627 GAAGACCTCATATAGTCCTTACATTTG 57.517 37.037 0.00 0.00 33.29 2.32
1864 2444 8.783660 AGACCTCATATAGTCCTTACATTTGA 57.216 34.615 0.00 0.00 33.29 2.69
1865 2445 9.386122 AGACCTCATATAGTCCTTACATTTGAT 57.614 33.333 0.00 0.00 33.29 2.57
1866 2446 9.646427 GACCTCATATAGTCCTTACATTTGATC 57.354 37.037 0.00 0.00 0.00 2.92
1867 2447 9.386122 ACCTCATATAGTCCTTACATTTGATCT 57.614 33.333 0.00 0.00 0.00 2.75
1868 2448 9.868277 CCTCATATAGTCCTTACATTTGATCTC 57.132 37.037 0.00 0.00 0.00 2.75
1877 2457 9.442047 GTCCTTACATTTGATCTCAATATAGGG 57.558 37.037 0.00 0.00 35.55 3.53
1878 2458 9.170890 TCCTTACATTTGATCTCAATATAGGGT 57.829 33.333 0.00 0.00 35.55 4.34
1879 2459 9.442047 CCTTACATTTGATCTCAATATAGGGTC 57.558 37.037 0.00 0.00 35.55 4.46
1880 2460 9.442047 CTTACATTTGATCTCAATATAGGGTCC 57.558 37.037 0.00 0.00 35.55 4.46
1881 2461 6.467677 ACATTTGATCTCAATATAGGGTCCG 58.532 40.000 0.00 0.00 35.55 4.79
1882 2462 4.537135 TTGATCTCAATATAGGGTCCGC 57.463 45.455 0.00 0.00 0.00 5.54
1883 2463 3.779444 TGATCTCAATATAGGGTCCGCT 58.221 45.455 0.00 0.00 0.00 5.52
1884 2464 3.511540 TGATCTCAATATAGGGTCCGCTG 59.488 47.826 0.00 0.00 0.00 5.18
1885 2465 3.238788 TCTCAATATAGGGTCCGCTGA 57.761 47.619 0.00 0.00 0.00 4.26
1886 2466 2.891580 TCTCAATATAGGGTCCGCTGAC 59.108 50.000 0.00 0.00 40.98 3.51
1887 2467 2.628178 CTCAATATAGGGTCCGCTGACA 59.372 50.000 10.60 0.00 43.65 3.58
1888 2468 3.035363 TCAATATAGGGTCCGCTGACAA 58.965 45.455 10.60 0.00 43.65 3.18
1889 2469 3.646162 TCAATATAGGGTCCGCTGACAAT 59.354 43.478 10.60 3.42 43.65 2.71
1890 2470 3.685139 ATATAGGGTCCGCTGACAATG 57.315 47.619 10.60 0.00 43.65 2.82
1891 2471 1.204146 ATAGGGTCCGCTGACAATGT 58.796 50.000 10.60 0.00 43.65 2.71
1892 2472 0.249120 TAGGGTCCGCTGACAATGTG 59.751 55.000 10.60 0.00 43.65 3.21
1893 2473 2.040544 GGGTCCGCTGACAATGTGG 61.041 63.158 10.60 0.00 43.65 4.17
1894 2474 1.003839 GGTCCGCTGACAATGTGGA 60.004 57.895 10.60 0.00 43.65 4.02
1895 2475 4.693532 TCCGCTGACAATGTGGAC 57.306 55.556 0.00 0.00 38.95 4.02
1896 2476 1.751563 TCCGCTGACAATGTGGACA 59.248 52.632 0.00 0.00 38.95 4.02
1897 2477 0.324614 TCCGCTGACAATGTGGACAT 59.675 50.000 0.00 0.00 38.95 3.06
1898 2478 1.552792 TCCGCTGACAATGTGGACATA 59.447 47.619 0.00 0.00 38.95 2.29
1899 2479 2.170397 TCCGCTGACAATGTGGACATAT 59.830 45.455 0.00 0.00 38.95 1.78
1900 2480 3.386402 TCCGCTGACAATGTGGACATATA 59.614 43.478 0.00 0.00 38.95 0.86
1901 2481 3.742882 CCGCTGACAATGTGGACATATAG 59.257 47.826 0.00 0.00 37.26 1.31
1902 2482 3.185188 CGCTGACAATGTGGACATATAGC 59.815 47.826 0.00 1.20 35.10 2.97
1903 2483 3.185188 GCTGACAATGTGGACATATAGCG 59.815 47.826 0.00 0.00 35.10 4.26
1904 2484 4.620982 CTGACAATGTGGACATATAGCGA 58.379 43.478 0.00 0.00 35.10 4.93
1905 2485 5.213891 TGACAATGTGGACATATAGCGAT 57.786 39.130 0.00 0.00 35.10 4.58
1906 2486 4.990426 TGACAATGTGGACATATAGCGATG 59.010 41.667 0.00 0.00 35.10 3.84
1907 2487 5.213891 ACAATGTGGACATATAGCGATGA 57.786 39.130 3.68 0.00 35.10 2.92
1908 2488 4.991056 ACAATGTGGACATATAGCGATGAC 59.009 41.667 3.68 0.00 35.10 3.06
1909 2489 4.871933 ATGTGGACATATAGCGATGACA 57.128 40.909 3.68 0.00 34.26 3.58
1910 2490 4.871933 TGTGGACATATAGCGATGACAT 57.128 40.909 3.68 0.00 0.00 3.06
1911 2491 5.975693 TGTGGACATATAGCGATGACATA 57.024 39.130 3.68 0.00 0.00 2.29
1912 2492 6.339587 TGTGGACATATAGCGATGACATAA 57.660 37.500 3.68 0.00 0.00 1.90
1913 2493 6.389906 TGTGGACATATAGCGATGACATAAG 58.610 40.000 3.68 0.00 0.00 1.73
1914 2494 5.807520 GTGGACATATAGCGATGACATAAGG 59.192 44.000 3.68 0.00 0.00 2.69
1915 2495 5.714806 TGGACATATAGCGATGACATAAGGA 59.285 40.000 3.68 0.00 0.00 3.36
1916 2496 6.127619 TGGACATATAGCGATGACATAAGGAG 60.128 42.308 3.68 0.00 0.00 3.69
1917 2497 6.127591 GGACATATAGCGATGACATAAGGAGT 60.128 42.308 3.68 0.00 0.00 3.85
1918 2498 7.233389 ACATATAGCGATGACATAAGGAGTT 57.767 36.000 3.68 0.00 0.00 3.01
1919 2499 7.316640 ACATATAGCGATGACATAAGGAGTTC 58.683 38.462 3.68 0.00 0.00 3.01
1920 2500 3.085443 AGCGATGACATAAGGAGTTCG 57.915 47.619 0.00 0.00 0.00 3.95
1921 2501 2.128035 GCGATGACATAAGGAGTTCGG 58.872 52.381 0.00 0.00 0.00 4.30
1922 2502 2.481449 GCGATGACATAAGGAGTTCGGT 60.481 50.000 0.00 0.00 0.00 4.69
1923 2503 3.782046 CGATGACATAAGGAGTTCGGTT 58.218 45.455 0.00 0.00 0.00 4.44
1924 2504 3.797256 CGATGACATAAGGAGTTCGGTTC 59.203 47.826 0.00 0.00 0.00 3.62
1925 2505 3.226346 TGACATAAGGAGTTCGGTTCG 57.774 47.619 0.00 0.00 0.00 3.95
1926 2506 2.094390 TGACATAAGGAGTTCGGTTCGG 60.094 50.000 0.00 0.00 0.00 4.30
1927 2507 1.897802 ACATAAGGAGTTCGGTTCGGT 59.102 47.619 0.00 0.00 0.00 4.69
1928 2508 2.094338 ACATAAGGAGTTCGGTTCGGTC 60.094 50.000 0.00 0.00 0.00 4.79
1929 2509 1.619654 TAAGGAGTTCGGTTCGGTCA 58.380 50.000 0.00 0.00 0.00 4.02
1930 2510 0.974383 AAGGAGTTCGGTTCGGTCAT 59.026 50.000 0.00 0.00 0.00 3.06
1931 2511 0.974383 AGGAGTTCGGTTCGGTCATT 59.026 50.000 0.00 0.00 0.00 2.57
1932 2512 1.067071 AGGAGTTCGGTTCGGTCATTC 60.067 52.381 0.00 0.00 0.00 2.67
1933 2513 1.067071 GGAGTTCGGTTCGGTCATTCT 60.067 52.381 0.00 0.00 0.00 2.40
1934 2514 2.612221 GGAGTTCGGTTCGGTCATTCTT 60.612 50.000 0.00 0.00 0.00 2.52
1935 2515 3.064931 GAGTTCGGTTCGGTCATTCTTT 58.935 45.455 0.00 0.00 0.00 2.52
1936 2516 3.473625 AGTTCGGTTCGGTCATTCTTTT 58.526 40.909 0.00 0.00 0.00 2.27
1937 2517 3.497262 AGTTCGGTTCGGTCATTCTTTTC 59.503 43.478 0.00 0.00 0.00 2.29
1938 2518 2.419667 TCGGTTCGGTCATTCTTTTCC 58.580 47.619 0.00 0.00 0.00 3.13
1939 2519 2.038033 TCGGTTCGGTCATTCTTTTCCT 59.962 45.455 0.00 0.00 0.00 3.36
1940 2520 2.812011 CGGTTCGGTCATTCTTTTCCTT 59.188 45.455 0.00 0.00 0.00 3.36
1941 2521 3.120304 CGGTTCGGTCATTCTTTTCCTTC 60.120 47.826 0.00 0.00 0.00 3.46
1942 2522 3.818773 GGTTCGGTCATTCTTTTCCTTCA 59.181 43.478 0.00 0.00 0.00 3.02
1943 2523 4.320275 GGTTCGGTCATTCTTTTCCTTCAC 60.320 45.833 0.00 0.00 0.00 3.18
1944 2524 4.351874 TCGGTCATTCTTTTCCTTCACT 57.648 40.909 0.00 0.00 0.00 3.41
1945 2525 4.315803 TCGGTCATTCTTTTCCTTCACTC 58.684 43.478 0.00 0.00 0.00 3.51
1946 2526 4.040461 TCGGTCATTCTTTTCCTTCACTCT 59.960 41.667 0.00 0.00 0.00 3.24
1947 2527 4.153117 CGGTCATTCTTTTCCTTCACTCTG 59.847 45.833 0.00 0.00 0.00 3.35
1948 2528 4.083057 GGTCATTCTTTTCCTTCACTCTGC 60.083 45.833 0.00 0.00 0.00 4.26
1949 2529 4.759183 GTCATTCTTTTCCTTCACTCTGCT 59.241 41.667 0.00 0.00 0.00 4.24
1950 2530 4.758674 TCATTCTTTTCCTTCACTCTGCTG 59.241 41.667 0.00 0.00 0.00 4.41
1951 2531 3.845781 TCTTTTCCTTCACTCTGCTGT 57.154 42.857 0.00 0.00 0.00 4.40
1952 2532 3.733337 TCTTTTCCTTCACTCTGCTGTC 58.267 45.455 0.00 0.00 0.00 3.51
1953 2533 2.550830 TTTCCTTCACTCTGCTGTCC 57.449 50.000 0.00 0.00 0.00 4.02
1954 2534 0.318441 TTCCTTCACTCTGCTGTCCG 59.682 55.000 0.00 0.00 0.00 4.79
1955 2535 1.079543 CCTTCACTCTGCTGTCCGG 60.080 63.158 0.00 0.00 0.00 5.14
1956 2536 1.668294 CTTCACTCTGCTGTCCGGT 59.332 57.895 0.00 0.00 0.00 5.28
1957 2537 0.389166 CTTCACTCTGCTGTCCGGTC 60.389 60.000 0.00 0.00 0.00 4.79
1958 2538 1.112916 TTCACTCTGCTGTCCGGTCA 61.113 55.000 0.00 0.00 0.00 4.02
1959 2539 1.373497 CACTCTGCTGTCCGGTCAC 60.373 63.158 0.00 0.00 0.00 3.67
1960 2540 2.262915 CTCTGCTGTCCGGTCACC 59.737 66.667 0.00 0.00 0.00 4.02
1986 2566 3.487202 GCGCTCGCGGATGTTTGA 61.487 61.111 13.56 0.00 40.19 2.69
1987 2567 2.697425 CGCTCGCGGATGTTTGAG 59.303 61.111 6.13 0.00 35.56 3.02
1988 2568 2.802667 CGCTCGCGGATGTTTGAGG 61.803 63.158 6.13 0.00 35.56 3.86
1989 2569 1.447838 GCTCGCGGATGTTTGAGGA 60.448 57.895 6.13 0.00 0.00 3.71
1990 2570 1.424493 GCTCGCGGATGTTTGAGGAG 61.424 60.000 6.13 0.00 0.00 3.69
1991 2571 0.807667 CTCGCGGATGTTTGAGGAGG 60.808 60.000 6.13 0.00 0.00 4.30
1992 2572 2.464459 CGCGGATGTTTGAGGAGGC 61.464 63.158 0.00 0.00 0.00 4.70
1993 2573 2.115291 GCGGATGTTTGAGGAGGCC 61.115 63.158 0.00 0.00 0.00 5.19
1994 2574 1.815421 CGGATGTTTGAGGAGGCCG 60.815 63.158 0.00 0.00 0.00 6.13
1995 2575 1.452108 GGATGTTTGAGGAGGCCGG 60.452 63.158 0.00 0.00 0.00 6.13
1996 2576 1.452108 GATGTTTGAGGAGGCCGGG 60.452 63.158 2.18 0.00 0.00 5.73
1997 2577 2.893682 GATGTTTGAGGAGGCCGGGG 62.894 65.000 2.18 0.00 0.00 5.73
1998 2578 3.647771 GTTTGAGGAGGCCGGGGT 61.648 66.667 2.18 0.00 0.00 4.95
1999 2579 2.856988 TTTGAGGAGGCCGGGGTT 60.857 61.111 2.18 0.00 0.00 4.11
2000 2580 3.204467 TTTGAGGAGGCCGGGGTTG 62.204 63.158 2.18 0.00 0.00 3.77
2001 2581 4.974438 TGAGGAGGCCGGGGTTGT 62.974 66.667 2.18 0.00 0.00 3.32
2002 2582 2.686106 GAGGAGGCCGGGGTTGTA 60.686 66.667 2.18 0.00 0.00 2.41
2003 2583 2.687566 AGGAGGCCGGGGTTGTAG 60.688 66.667 2.18 0.00 0.00 2.74
2004 2584 2.686106 GGAGGCCGGGGTTGTAGA 60.686 66.667 2.18 0.00 0.00 2.59
2005 2585 2.070650 GGAGGCCGGGGTTGTAGAT 61.071 63.158 2.18 0.00 0.00 1.98
2006 2586 1.146263 GAGGCCGGGGTTGTAGATG 59.854 63.158 2.18 0.00 0.00 2.90
2007 2587 2.516225 GGCCGGGGTTGTAGATGC 60.516 66.667 2.18 0.00 0.00 3.91
2008 2588 2.590092 GCCGGGGTTGTAGATGCT 59.410 61.111 2.18 0.00 0.00 3.79
2009 2589 1.077716 GCCGGGGTTGTAGATGCTT 60.078 57.895 2.18 0.00 0.00 3.91
2010 2590 1.095807 GCCGGGGTTGTAGATGCTTC 61.096 60.000 2.18 0.00 0.00 3.86
2011 2591 0.810031 CCGGGGTTGTAGATGCTTCG 60.810 60.000 0.00 0.00 0.00 3.79
2012 2592 1.429148 CGGGGTTGTAGATGCTTCGC 61.429 60.000 0.00 0.00 0.00 4.70
2013 2593 1.095807 GGGGTTGTAGATGCTTCGCC 61.096 60.000 0.00 0.00 0.00 5.54
2014 2594 0.107654 GGGTTGTAGATGCTTCGCCT 60.108 55.000 0.00 0.00 0.00 5.52
2015 2595 1.138266 GGGTTGTAGATGCTTCGCCTA 59.862 52.381 0.00 0.00 0.00 3.93
2016 2596 2.202566 GGTTGTAGATGCTTCGCCTAC 58.797 52.381 0.00 0.00 34.81 3.18
2017 2597 2.202566 GTTGTAGATGCTTCGCCTACC 58.797 52.381 0.00 0.00 33.66 3.18
2018 2598 1.480789 TGTAGATGCTTCGCCTACCA 58.519 50.000 0.00 0.00 33.66 3.25
2019 2599 1.828595 TGTAGATGCTTCGCCTACCAA 59.171 47.619 0.00 0.00 33.66 3.67
2020 2600 2.202566 GTAGATGCTTCGCCTACCAAC 58.797 52.381 0.00 0.00 0.00 3.77
2021 2601 0.107654 AGATGCTTCGCCTACCAACC 60.108 55.000 0.00 0.00 0.00 3.77
2022 2602 0.107654 GATGCTTCGCCTACCAACCT 60.108 55.000 0.00 0.00 0.00 3.50
2023 2603 1.138266 GATGCTTCGCCTACCAACCTA 59.862 52.381 0.00 0.00 0.00 3.08
2024 2604 0.535335 TGCTTCGCCTACCAACCTAG 59.465 55.000 0.00 0.00 0.00 3.02
2025 2605 0.822164 GCTTCGCCTACCAACCTAGA 59.178 55.000 0.00 0.00 0.00 2.43
2026 2606 1.206371 GCTTCGCCTACCAACCTAGAA 59.794 52.381 0.00 0.00 0.00 2.10
2027 2607 2.354403 GCTTCGCCTACCAACCTAGAAA 60.354 50.000 0.00 0.00 0.00 2.52
2028 2608 3.867216 GCTTCGCCTACCAACCTAGAAAA 60.867 47.826 0.00 0.00 0.00 2.29
2029 2609 4.320870 CTTCGCCTACCAACCTAGAAAAA 58.679 43.478 0.00 0.00 0.00 1.94
2046 2626 2.159179 AAAACTTTGGAGCAGGGTGT 57.841 45.000 0.00 0.00 0.00 4.16
2047 2627 3.306472 AAAACTTTGGAGCAGGGTGTA 57.694 42.857 0.00 0.00 0.00 2.90
2056 2636 1.119574 AGCAGGGTGTACCACGAGTT 61.120 55.000 3.11 0.00 43.89 3.01
2060 2640 0.677842 GGGTGTACCACGAGTTGTCT 59.322 55.000 3.11 0.00 39.85 3.41
2069 2649 1.317611 CACGAGTTGTCTTGATACGCG 59.682 52.381 3.53 3.53 40.20 6.01
2089 2669 3.188100 CACGACGCGACATGGCAT 61.188 61.111 15.93 0.00 0.00 4.40
2092 2672 3.498834 GACGCGACATGGCATGCA 61.499 61.111 26.70 6.13 0.00 3.96
2095 2675 2.051614 GCGACATGGCATGCATCG 60.052 61.111 26.78 26.78 33.51 3.84
2113 2693 0.532862 CGTGCACCCAGTTCACTCTT 60.533 55.000 12.15 0.00 28.21 2.85
2114 2694 1.680338 GTGCACCCAGTTCACTCTTT 58.320 50.000 5.22 0.00 27.93 2.52
2160 2747 5.548406 ACACTCTTTATTTACTTGAGCGGT 58.452 37.500 0.00 0.00 0.00 5.68
2183 2770 1.941734 GACGAGCCTCATCGCTTCG 60.942 63.158 0.00 0.00 46.60 3.79
2198 2786 1.867919 CTTCGTCAGCGTCTCACCCT 61.868 60.000 0.00 0.00 39.49 4.34
2218 2806 1.078143 GTCCAGTCCAGGTCATGCC 60.078 63.158 0.00 0.00 37.58 4.40
2221 2809 2.607750 AGTCCAGGTCATGCCGGT 60.608 61.111 1.90 0.00 43.70 5.28
2252 2840 4.284860 CGATGATCCGAGGCCGCA 62.285 66.667 7.44 0.00 0.00 5.69
2253 2841 2.356793 GATGATCCGAGGCCGCAG 60.357 66.667 7.44 0.00 0.00 5.18
2527 3137 2.264794 CGCGGGGAGGCATATACC 59.735 66.667 0.00 0.00 0.00 2.73
2529 3139 1.827399 CGCGGGGAGGCATATACCTT 61.827 60.000 0.00 0.00 41.32 3.50
2530 3140 0.036294 GCGGGGAGGCATATACCTTC 60.036 60.000 0.00 0.00 41.32 3.46
2531 3141 1.645710 CGGGGAGGCATATACCTTCT 58.354 55.000 0.00 0.00 41.32 2.85
2557 3171 0.529555 CCACCACGGTTGCAAAAAGG 60.530 55.000 0.00 3.70 0.00 3.11
2560 3174 0.031994 CCACGGTTGCAAAAAGGAGG 59.968 55.000 0.00 0.00 0.00 4.30
2570 3184 2.676163 AAAAAGGAGGCGCGTCACCT 62.676 55.000 24.50 24.50 41.41 4.00
2571 3185 2.676163 AAAAGGAGGCGCGTCACCTT 62.676 55.000 32.50 32.50 43.40 3.50
2572 3186 3.883744 AAGGAGGCGCGTCACCTTG 62.884 63.158 36.06 0.00 40.59 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.501602 GCACTGGGCAGCAACCTTT 61.502 57.895 0.00 0.00 43.97 3.11
128 205 2.044492 ACAGTGATGGGAGAGGTAAGGA 59.956 50.000 0.00 0.00 0.00 3.36
129 206 2.432510 GACAGTGATGGGAGAGGTAAGG 59.567 54.545 0.00 0.00 0.00 2.69
151 228 3.497942 CCACTACCAGTGTTTTTAGGGCT 60.498 47.826 5.65 0.00 44.50 5.19
180 257 6.238593 GCTTTCCATGAGATAAATCCTGTGAC 60.239 42.308 0.00 0.00 0.00 3.67
252 329 3.057315 ACTGCAACGGATCATTTTTCCTG 60.057 43.478 0.00 0.00 0.00 3.86
335 414 2.789409 AATTACAGTGGCCTCTCACC 57.211 50.000 3.81 0.00 38.34 4.02
409 494 3.053693 TGGGGATAGCAGCACAAAGTTAT 60.054 43.478 0.00 0.00 0.00 1.89
424 509 0.263468 TCATCGTCCAGGTGGGGATA 59.737 55.000 0.00 0.00 39.62 2.59
482 567 2.284515 ATTGGATTCGGAGGGGGCAC 62.285 60.000 0.00 0.00 0.00 5.01
483 568 1.994885 GATTGGATTCGGAGGGGGCA 61.995 60.000 0.00 0.00 0.00 5.36
484 569 1.228276 GATTGGATTCGGAGGGGGC 60.228 63.158 0.00 0.00 0.00 5.80
485 570 1.062488 AGGATTGGATTCGGAGGGGG 61.062 60.000 0.00 0.00 0.00 5.40
486 571 1.625818 CTAGGATTGGATTCGGAGGGG 59.374 57.143 0.00 0.00 0.00 4.79
487 572 2.330216 ACTAGGATTGGATTCGGAGGG 58.670 52.381 0.00 0.00 0.00 4.30
488 573 4.423625 AAACTAGGATTGGATTCGGAGG 57.576 45.455 0.00 0.00 0.00 4.30
489 574 5.741388 CAAAACTAGGATTGGATTCGGAG 57.259 43.478 0.00 0.00 0.00 4.63
497 582 4.272489 TGATGCTCCAAAACTAGGATTGG 58.728 43.478 18.11 18.11 46.03 3.16
498 583 4.337555 CCTGATGCTCCAAAACTAGGATTG 59.662 45.833 0.00 0.00 33.99 2.67
499 584 4.530875 CCTGATGCTCCAAAACTAGGATT 58.469 43.478 0.00 0.00 33.99 3.01
500 585 3.117738 CCCTGATGCTCCAAAACTAGGAT 60.118 47.826 0.00 0.00 33.99 3.24
501 586 2.239654 CCCTGATGCTCCAAAACTAGGA 59.760 50.000 0.00 0.00 0.00 2.94
502 587 2.239654 TCCCTGATGCTCCAAAACTAGG 59.760 50.000 0.00 0.00 0.00 3.02
503 588 3.634397 TCCCTGATGCTCCAAAACTAG 57.366 47.619 0.00 0.00 0.00 2.57
504 589 4.018506 TGATTCCCTGATGCTCCAAAACTA 60.019 41.667 0.00 0.00 0.00 2.24
505 590 2.978156 TTCCCTGATGCTCCAAAACT 57.022 45.000 0.00 0.00 0.00 2.66
506 591 3.091545 TGATTCCCTGATGCTCCAAAAC 58.908 45.455 0.00 0.00 0.00 2.43
507 592 3.454719 TGATTCCCTGATGCTCCAAAA 57.545 42.857 0.00 0.00 0.00 2.44
508 593 3.091545 GTTGATTCCCTGATGCTCCAAA 58.908 45.455 0.00 0.00 0.00 3.28
509 594 2.041485 TGTTGATTCCCTGATGCTCCAA 59.959 45.455 0.00 0.00 0.00 3.53
510 595 1.634973 TGTTGATTCCCTGATGCTCCA 59.365 47.619 0.00 0.00 0.00 3.86
511 596 2.295885 CTGTTGATTCCCTGATGCTCC 58.704 52.381 0.00 0.00 0.00 4.70
512 597 1.674962 GCTGTTGATTCCCTGATGCTC 59.325 52.381 0.00 0.00 0.00 4.26
513 598 1.684248 GGCTGTTGATTCCCTGATGCT 60.684 52.381 0.00 0.00 0.00 3.79
514 599 0.743097 GGCTGTTGATTCCCTGATGC 59.257 55.000 0.00 0.00 0.00 3.91
515 600 1.019673 CGGCTGTTGATTCCCTGATG 58.980 55.000 0.00 0.00 0.00 3.07
516 601 0.749454 GCGGCTGTTGATTCCCTGAT 60.749 55.000 0.00 0.00 0.00 2.90
517 602 1.377202 GCGGCTGTTGATTCCCTGA 60.377 57.895 0.00 0.00 0.00 3.86
518 603 1.675310 TGCGGCTGTTGATTCCCTG 60.675 57.895 0.00 0.00 0.00 4.45
519 604 1.675641 GTGCGGCTGTTGATTCCCT 60.676 57.895 0.00 0.00 0.00 4.20
520 605 1.244019 AAGTGCGGCTGTTGATTCCC 61.244 55.000 0.00 0.00 0.00 3.97
521 606 0.598065 AAAGTGCGGCTGTTGATTCC 59.402 50.000 0.00 0.00 0.00 3.01
522 607 2.053627 CAAAAGTGCGGCTGTTGATTC 58.946 47.619 0.00 0.00 43.53 2.52
523 608 1.269726 CCAAAAGTGCGGCTGTTGATT 60.270 47.619 11.29 0.00 43.53 2.57
524 609 0.314935 CCAAAAGTGCGGCTGTTGAT 59.685 50.000 11.29 0.00 43.53 2.57
525 610 1.732917 CCAAAAGTGCGGCTGTTGA 59.267 52.632 11.29 0.00 43.53 3.18
526 611 1.300080 CCCAAAAGTGCGGCTGTTG 60.300 57.895 0.00 4.53 41.13 3.33
527 612 1.454847 TCCCAAAAGTGCGGCTGTT 60.455 52.632 0.00 0.00 0.00 3.16
528 613 2.193536 GTCCCAAAAGTGCGGCTGT 61.194 57.895 0.00 0.00 0.00 4.40
529 614 2.192861 TGTCCCAAAAGTGCGGCTG 61.193 57.895 0.00 0.00 0.00 4.85
530 615 2.193536 GTGTCCCAAAAGTGCGGCT 61.194 57.895 0.00 0.00 0.00 5.52
531 616 2.335011 GTGTCCCAAAAGTGCGGC 59.665 61.111 0.00 0.00 0.00 6.53
532 617 1.358759 GTGTGTCCCAAAAGTGCGG 59.641 57.895 0.00 0.00 0.00 5.69
535 620 3.249917 GTTTGTGTGTGTCCCAAAAGTG 58.750 45.455 0.00 0.00 30.57 3.16
591 676 1.454201 TCAGAGTCTAGTCCACGCTG 58.546 55.000 7.28 7.28 41.56 5.18
594 679 4.506886 AGTTTTCAGAGTCTAGTCCACG 57.493 45.455 0.00 0.00 0.00 4.94
724 825 2.366533 CTCAGCAGCTCCATGACAAAT 58.633 47.619 0.00 0.00 0.00 2.32
777 878 1.674221 CCTCTCCAAAGTTCTCTGGCG 60.674 57.143 0.00 0.00 32.33 5.69
824 925 2.456119 CGATCCACCGTTGCAGCTC 61.456 63.158 0.00 0.00 0.00 4.09
862 963 2.821969 CCTCTGCCAACAGTAAATGCTT 59.178 45.455 0.00 0.00 44.77 3.91
945 1046 1.765230 GACGAGTCCACCAGAGGTAT 58.235 55.000 0.00 0.00 32.11 2.73
991 1092 2.597340 CCATCTCATTGGCGGGGT 59.403 61.111 0.00 0.00 0.00 4.95
1165 1269 5.533112 ACCCTTCTCATCTCTAAGGATTGA 58.467 41.667 0.00 0.00 42.01 2.57
1239 1344 1.144057 CGCCATAGCTTCCGAGGTT 59.856 57.895 0.00 0.00 36.60 3.50
1516 2096 0.325296 AGACAAGTCGGGGGCTCATA 60.325 55.000 0.00 0.00 34.09 2.15
1528 2108 3.963129 TGAGTTTGGAAACCAGACAAGT 58.037 40.909 12.63 0.00 40.54 3.16
1616 2196 3.458189 AGGATCGGATTTCTTAAGTGCG 58.542 45.455 1.63 0.66 0.00 5.34
1617 2197 4.698575 AGAGGATCGGATTTCTTAAGTGC 58.301 43.478 1.63 0.00 42.67 4.40
1618 2198 7.224949 GGTTTAGAGGATCGGATTTCTTAAGTG 59.775 40.741 1.63 0.00 42.67 3.16
1619 2199 7.093024 TGGTTTAGAGGATCGGATTTCTTAAGT 60.093 37.037 1.63 0.00 42.67 2.24
1620 2200 7.272978 TGGTTTAGAGGATCGGATTTCTTAAG 58.727 38.462 10.09 0.00 42.67 1.85
1621 2201 7.190335 TGGTTTAGAGGATCGGATTTCTTAA 57.810 36.000 10.09 6.20 42.67 1.85
1622 2202 6.801718 TGGTTTAGAGGATCGGATTTCTTA 57.198 37.500 10.09 1.33 42.67 2.10
1623 2203 5.693769 TGGTTTAGAGGATCGGATTTCTT 57.306 39.130 10.09 0.00 42.67 2.52
1624 2204 5.509840 CGATGGTTTAGAGGATCGGATTTCT 60.510 44.000 9.82 9.82 42.67 2.52
1625 2205 4.686554 CGATGGTTTAGAGGATCGGATTTC 59.313 45.833 0.00 0.00 42.67 2.17
1626 2206 4.101119 ACGATGGTTTAGAGGATCGGATTT 59.899 41.667 0.00 0.00 41.56 2.17
1627 2207 3.641906 ACGATGGTTTAGAGGATCGGATT 59.358 43.478 0.00 0.00 41.56 3.01
1628 2208 3.005897 CACGATGGTTTAGAGGATCGGAT 59.994 47.826 0.00 0.00 41.56 4.18
1629 2209 2.361119 CACGATGGTTTAGAGGATCGGA 59.639 50.000 0.00 0.00 41.56 4.55
1630 2210 2.545952 CCACGATGGTTTAGAGGATCGG 60.546 54.545 0.00 0.00 41.56 4.18
1631 2211 2.361119 TCCACGATGGTTTAGAGGATCG 59.639 50.000 0.00 0.00 42.66 3.69
1632 2212 3.132289 TGTCCACGATGGTTTAGAGGATC 59.868 47.826 0.00 0.00 39.03 3.36
1633 2213 3.104512 TGTCCACGATGGTTTAGAGGAT 58.895 45.455 0.00 0.00 39.03 3.24
1634 2214 2.232941 GTGTCCACGATGGTTTAGAGGA 59.767 50.000 0.00 0.00 39.03 3.71
1635 2215 2.618053 GTGTCCACGATGGTTTAGAGG 58.382 52.381 0.00 0.00 39.03 3.69
1650 2230 4.388499 ACATGGCCGGACGTGTCC 62.388 66.667 30.11 8.09 46.18 4.02
1651 2231 2.813908 GACATGGCCGGACGTGTC 60.814 66.667 39.66 39.66 46.43 3.67
1652 2232 3.311110 AGACATGGCCGGACGTGT 61.311 61.111 35.43 35.43 42.93 4.49
1653 2233 2.815211 CAGACATGGCCGGACGTG 60.815 66.667 28.52 28.52 0.00 4.49
1654 2234 4.760047 GCAGACATGGCCGGACGT 62.760 66.667 5.05 0.00 0.00 4.34
1655 2235 3.958147 AAGCAGACATGGCCGGACG 62.958 63.158 5.05 0.00 0.00 4.79
1656 2236 0.392461 TAAAGCAGACATGGCCGGAC 60.392 55.000 5.05 0.56 0.00 4.79
1657 2237 0.326595 TTAAAGCAGACATGGCCGGA 59.673 50.000 5.05 0.00 0.00 5.14
1658 2238 0.734889 CTTAAAGCAGACATGGCCGG 59.265 55.000 0.00 0.00 0.00 6.13
1659 2239 0.099436 GCTTAAAGCAGACATGGCCG 59.901 55.000 0.00 0.00 41.89 6.13
1660 2240 1.467920 AGCTTAAAGCAGACATGGCC 58.532 50.000 0.00 0.00 45.56 5.36
1661 2241 2.751806 AGAAGCTTAAAGCAGACATGGC 59.248 45.455 0.00 0.00 45.56 4.40
1662 2242 6.690194 AATAGAAGCTTAAAGCAGACATGG 57.310 37.500 0.00 0.00 45.56 3.66
1663 2243 9.661187 CATAAATAGAAGCTTAAAGCAGACATG 57.339 33.333 0.00 0.00 45.56 3.21
1664 2244 8.348507 GCATAAATAGAAGCTTAAAGCAGACAT 58.651 33.333 0.00 0.00 45.56 3.06
1665 2245 7.465916 CGCATAAATAGAAGCTTAAAGCAGACA 60.466 37.037 0.00 0.00 45.56 3.41
1666 2246 6.848296 CGCATAAATAGAAGCTTAAAGCAGAC 59.152 38.462 0.00 0.00 45.56 3.51
1667 2247 6.538742 ACGCATAAATAGAAGCTTAAAGCAGA 59.461 34.615 0.00 0.00 45.56 4.26
1668 2248 6.719365 ACGCATAAATAGAAGCTTAAAGCAG 58.281 36.000 0.00 0.00 45.56 4.24
1669 2249 6.677781 ACGCATAAATAGAAGCTTAAAGCA 57.322 33.333 0.00 0.00 45.56 3.91
1670 2250 7.186804 TGAACGCATAAATAGAAGCTTAAAGC 58.813 34.615 0.00 0.00 42.84 3.51
1671 2251 9.162793 CATGAACGCATAAATAGAAGCTTAAAG 57.837 33.333 0.00 0.00 32.27 1.85
1672 2252 7.643764 GCATGAACGCATAAATAGAAGCTTAAA 59.356 33.333 0.00 0.00 32.27 1.52
1673 2253 7.132213 GCATGAACGCATAAATAGAAGCTTAA 58.868 34.615 0.00 0.00 32.27 1.85
1674 2254 6.259829 TGCATGAACGCATAAATAGAAGCTTA 59.740 34.615 0.00 0.00 36.86 3.09
1675 2255 5.066375 TGCATGAACGCATAAATAGAAGCTT 59.934 36.000 0.00 0.00 36.86 3.74
1676 2256 4.576053 TGCATGAACGCATAAATAGAAGCT 59.424 37.500 0.00 0.00 36.86 3.74
1677 2257 4.847633 TGCATGAACGCATAAATAGAAGC 58.152 39.130 0.00 0.00 36.86 3.86
1678 2258 4.908156 GCTGCATGAACGCATAAATAGAAG 59.092 41.667 0.00 0.00 42.06 2.85
1679 2259 4.261155 GGCTGCATGAACGCATAAATAGAA 60.261 41.667 0.50 0.00 42.06 2.10
1680 2260 3.250762 GGCTGCATGAACGCATAAATAGA 59.749 43.478 0.50 0.00 42.06 1.98
1681 2261 3.003585 TGGCTGCATGAACGCATAAATAG 59.996 43.478 0.50 0.00 42.06 1.73
1682 2262 2.948315 TGGCTGCATGAACGCATAAATA 59.052 40.909 0.50 0.00 42.06 1.40
1683 2263 1.750206 TGGCTGCATGAACGCATAAAT 59.250 42.857 0.50 0.00 42.06 1.40
1684 2264 1.172175 TGGCTGCATGAACGCATAAA 58.828 45.000 0.50 0.00 42.06 1.40
1685 2265 1.391577 ATGGCTGCATGAACGCATAA 58.608 45.000 0.50 0.00 42.06 1.90
1686 2266 2.252976 TATGGCTGCATGAACGCATA 57.747 45.000 0.50 0.00 42.06 3.14
1687 2267 1.612676 ATATGGCTGCATGAACGCAT 58.387 45.000 0.50 0.00 42.06 4.73
1688 2268 1.391577 AATATGGCTGCATGAACGCA 58.608 45.000 0.50 0.00 40.32 5.24
1689 2269 2.223548 TGAAATATGGCTGCATGAACGC 60.224 45.455 0.50 0.00 0.00 4.84
1690 2270 3.181498 TGTGAAATATGGCTGCATGAACG 60.181 43.478 0.50 0.00 0.00 3.95
1691 2271 4.374843 TGTGAAATATGGCTGCATGAAC 57.625 40.909 0.50 0.00 0.00 3.18
1692 2272 5.601583 AATGTGAAATATGGCTGCATGAA 57.398 34.783 0.50 0.00 0.00 2.57
1693 2273 5.601583 AAATGTGAAATATGGCTGCATGA 57.398 34.783 0.50 0.00 0.00 3.07
1694 2274 6.537301 AGAAAAATGTGAAATATGGCTGCATG 59.463 34.615 0.50 0.00 0.00 4.06
1695 2275 6.646267 AGAAAAATGTGAAATATGGCTGCAT 58.354 32.000 0.50 0.00 0.00 3.96
1696 2276 6.040209 AGAAAAATGTGAAATATGGCTGCA 57.960 33.333 0.50 0.00 0.00 4.41
1697 2277 6.815142 AGAAGAAAAATGTGAAATATGGCTGC 59.185 34.615 0.00 0.00 0.00 5.25
1698 2278 8.767478 AAGAAGAAAAATGTGAAATATGGCTG 57.233 30.769 0.00 0.00 0.00 4.85
1707 2287 9.238368 ACCGGAATATAAGAAGAAAAATGTGAA 57.762 29.630 9.46 0.00 0.00 3.18
1708 2288 8.801882 ACCGGAATATAAGAAGAAAAATGTGA 57.198 30.769 9.46 0.00 0.00 3.58
1709 2289 8.673711 TGACCGGAATATAAGAAGAAAAATGTG 58.326 33.333 9.46 0.00 0.00 3.21
1710 2290 8.674607 GTGACCGGAATATAAGAAGAAAAATGT 58.325 33.333 9.46 0.00 0.00 2.71
1711 2291 8.893727 AGTGACCGGAATATAAGAAGAAAAATG 58.106 33.333 9.46 0.00 0.00 2.32
1712 2292 9.462606 AAGTGACCGGAATATAAGAAGAAAAAT 57.537 29.630 9.46 0.00 0.00 1.82
1713 2293 8.726988 CAAGTGACCGGAATATAAGAAGAAAAA 58.273 33.333 9.46 0.00 0.00 1.94
1714 2294 7.148306 GCAAGTGACCGGAATATAAGAAGAAAA 60.148 37.037 9.46 0.00 0.00 2.29
1715 2295 6.315393 GCAAGTGACCGGAATATAAGAAGAAA 59.685 38.462 9.46 0.00 0.00 2.52
1716 2296 5.815740 GCAAGTGACCGGAATATAAGAAGAA 59.184 40.000 9.46 0.00 0.00 2.52
1717 2297 5.105106 TGCAAGTGACCGGAATATAAGAAGA 60.105 40.000 9.46 0.00 0.00 2.87
1718 2298 5.116180 TGCAAGTGACCGGAATATAAGAAG 58.884 41.667 9.46 0.00 0.00 2.85
1719 2299 5.092554 TGCAAGTGACCGGAATATAAGAA 57.907 39.130 9.46 0.00 0.00 2.52
1720 2300 4.746535 TGCAAGTGACCGGAATATAAGA 57.253 40.909 9.46 0.00 0.00 2.10
1721 2301 4.816385 ACATGCAAGTGACCGGAATATAAG 59.184 41.667 9.46 0.00 0.00 1.73
1722 2302 4.574421 CACATGCAAGTGACCGGAATATAA 59.426 41.667 16.90 0.00 42.05 0.98
1723 2303 4.126437 CACATGCAAGTGACCGGAATATA 58.874 43.478 16.90 0.00 42.05 0.86
1724 2304 2.945008 CACATGCAAGTGACCGGAATAT 59.055 45.455 16.90 0.00 42.05 1.28
1725 2305 2.027653 TCACATGCAAGTGACCGGAATA 60.028 45.455 20.17 0.00 43.18 1.75
1726 2306 1.167851 CACATGCAAGTGACCGGAAT 58.832 50.000 16.90 0.00 42.05 3.01
1727 2307 0.107643 TCACATGCAAGTGACCGGAA 59.892 50.000 20.17 0.00 43.18 4.30
1728 2308 1.751563 TCACATGCAAGTGACCGGA 59.248 52.632 20.17 0.00 43.18 5.14
1729 2309 4.377370 TCACATGCAAGTGACCGG 57.623 55.556 20.17 0.00 43.18 5.28
1733 2313 3.405823 TCATCAGTCACATGCAAGTGA 57.594 42.857 20.17 20.17 45.64 3.41
1734 2314 3.749609 TCTTCATCAGTCACATGCAAGTG 59.250 43.478 15.79 15.79 40.85 3.16
1735 2315 4.011966 TCTTCATCAGTCACATGCAAGT 57.988 40.909 0.00 0.00 0.00 3.16
1736 2316 4.201920 CCATCTTCATCAGTCACATGCAAG 60.202 45.833 0.00 0.00 0.00 4.01
1737 2317 3.692593 CCATCTTCATCAGTCACATGCAA 59.307 43.478 0.00 0.00 0.00 4.08
1738 2318 3.054948 TCCATCTTCATCAGTCACATGCA 60.055 43.478 0.00 0.00 0.00 3.96
1739 2319 3.538591 TCCATCTTCATCAGTCACATGC 58.461 45.455 0.00 0.00 0.00 4.06
1740 2320 5.019785 TCTCCATCTTCATCAGTCACATG 57.980 43.478 0.00 0.00 0.00 3.21
1741 2321 4.961099 TCTCTCCATCTTCATCAGTCACAT 59.039 41.667 0.00 0.00 0.00 3.21
1742 2322 4.347607 TCTCTCCATCTTCATCAGTCACA 58.652 43.478 0.00 0.00 0.00 3.58
1743 2323 4.998671 TCTCTCCATCTTCATCAGTCAC 57.001 45.455 0.00 0.00 0.00 3.67
1744 2324 5.718607 TCTTTCTCTCCATCTTCATCAGTCA 59.281 40.000 0.00 0.00 0.00 3.41
1745 2325 6.219417 TCTTTCTCTCCATCTTCATCAGTC 57.781 41.667 0.00 0.00 0.00 3.51
1746 2326 6.617782 TTCTTTCTCTCCATCTTCATCAGT 57.382 37.500 0.00 0.00 0.00 3.41
1747 2327 7.329499 TCTTTCTTTCTCTCCATCTTCATCAG 58.671 38.462 0.00 0.00 0.00 2.90
1748 2328 7.250032 TCTTTCTTTCTCTCCATCTTCATCA 57.750 36.000 0.00 0.00 0.00 3.07
1749 2329 8.558973 TTTCTTTCTTTCTCTCCATCTTCATC 57.441 34.615 0.00 0.00 0.00 2.92
1750 2330 8.930846 TTTTCTTTCTTTCTCTCCATCTTCAT 57.069 30.769 0.00 0.00 0.00 2.57
1751 2331 8.213679 TCTTTTCTTTCTTTCTCTCCATCTTCA 58.786 33.333 0.00 0.00 0.00 3.02
1752 2332 8.614469 TCTTTTCTTTCTTTCTCTCCATCTTC 57.386 34.615 0.00 0.00 0.00 2.87
1754 2334 9.889128 CTATCTTTTCTTTCTTTCTCTCCATCT 57.111 33.333 0.00 0.00 0.00 2.90
1755 2335 9.883142 TCTATCTTTTCTTTCTTTCTCTCCATC 57.117 33.333 0.00 0.00 0.00 3.51
1756 2336 9.889128 CTCTATCTTTTCTTTCTTTCTCTCCAT 57.111 33.333 0.00 0.00 0.00 3.41
1757 2337 9.094578 TCTCTATCTTTTCTTTCTTTCTCTCCA 57.905 33.333 0.00 0.00 0.00 3.86
1758 2338 9.936759 TTCTCTATCTTTTCTTTCTTTCTCTCC 57.063 33.333 0.00 0.00 0.00 3.71
1784 2364 3.133901 GTGACCCACTCCAAACCATTTTT 59.866 43.478 0.00 0.00 0.00 1.94
1785 2365 2.698274 GTGACCCACTCCAAACCATTTT 59.302 45.455 0.00 0.00 0.00 1.82
1786 2366 2.316108 GTGACCCACTCCAAACCATTT 58.684 47.619 0.00 0.00 0.00 2.32
1787 2367 1.817740 CGTGACCCACTCCAAACCATT 60.818 52.381 0.00 0.00 31.34 3.16
1788 2368 0.250727 CGTGACCCACTCCAAACCAT 60.251 55.000 0.00 0.00 31.34 3.55
1789 2369 1.147376 CGTGACCCACTCCAAACCA 59.853 57.895 0.00 0.00 31.34 3.67
1790 2370 0.883370 GACGTGACCCACTCCAAACC 60.883 60.000 0.00 0.00 31.34 3.27
1791 2371 0.883370 GGACGTGACCCACTCCAAAC 60.883 60.000 0.00 0.00 34.34 2.93
1792 2372 1.052124 AGGACGTGACCCACTCCAAA 61.052 55.000 0.00 0.00 35.60 3.28
1793 2373 0.178955 TAGGACGTGACCCACTCCAA 60.179 55.000 0.00 0.00 35.60 3.53
1794 2374 0.896940 GTAGGACGTGACCCACTCCA 60.897 60.000 0.00 0.00 35.60 3.86
1795 2375 0.896940 TGTAGGACGTGACCCACTCC 60.897 60.000 0.00 0.00 34.37 3.85
1796 2376 1.135083 CATGTAGGACGTGACCCACTC 60.135 57.143 0.00 0.00 37.29 3.51
1797 2377 0.895530 CATGTAGGACGTGACCCACT 59.104 55.000 0.00 0.00 37.29 4.00
1798 2378 0.108329 CCATGTAGGACGTGACCCAC 60.108 60.000 0.00 0.00 41.22 4.61
1799 2379 1.895020 GCCATGTAGGACGTGACCCA 61.895 60.000 0.00 0.00 41.22 4.51
1800 2380 1.153429 GCCATGTAGGACGTGACCC 60.153 63.158 0.00 0.00 41.22 4.46
1801 2381 1.518572 CGCCATGTAGGACGTGACC 60.519 63.158 0.00 0.00 41.22 4.02
1802 2382 1.518572 CCGCCATGTAGGACGTGAC 60.519 63.158 0.00 0.00 41.22 3.67
1803 2383 1.679641 TCCGCCATGTAGGACGTGA 60.680 57.895 0.00 0.00 41.22 4.35
1804 2384 1.518572 GTCCGCCATGTAGGACGTG 60.519 63.158 17.50 0.00 46.08 4.49
1805 2385 2.890371 GTCCGCCATGTAGGACGT 59.110 61.111 17.50 0.00 46.08 4.34
1808 2388 1.117150 GGTAAGTCCGCCATGTAGGA 58.883 55.000 2.60 2.60 41.22 2.94
1809 2389 3.680842 GGTAAGTCCGCCATGTAGG 57.319 57.895 0.00 0.00 41.84 3.18
1819 2399 0.749454 TCTAGACGCCCGGTAAGTCC 60.749 60.000 14.87 1.75 35.65 3.85
1820 2400 1.065251 CTTCTAGACGCCCGGTAAGTC 59.935 57.143 11.73 11.73 35.30 3.01
1821 2401 1.101331 CTTCTAGACGCCCGGTAAGT 58.899 55.000 0.00 0.00 0.00 2.24
1822 2402 1.065251 GTCTTCTAGACGCCCGGTAAG 59.935 57.143 0.00 0.00 35.28 2.34
1823 2403 1.098050 GTCTTCTAGACGCCCGGTAA 58.902 55.000 0.00 0.00 35.28 2.85
1824 2404 0.749454 GGTCTTCTAGACGCCCGGTA 60.749 60.000 0.00 0.00 45.96 4.02
1825 2405 2.050934 GGTCTTCTAGACGCCCGGT 61.051 63.158 0.00 0.00 45.96 5.28
1826 2406 1.726533 GAGGTCTTCTAGACGCCCGG 61.727 65.000 0.00 0.00 45.96 5.73
1827 2407 1.030488 TGAGGTCTTCTAGACGCCCG 61.030 60.000 0.00 0.00 45.96 6.13
1828 2408 1.404843 ATGAGGTCTTCTAGACGCCC 58.595 55.000 0.00 0.00 45.96 6.13
1829 2409 5.005094 ACTATATGAGGTCTTCTAGACGCC 58.995 45.833 0.00 0.00 45.96 5.68
1830 2410 5.122711 GGACTATATGAGGTCTTCTAGACGC 59.877 48.000 0.00 0.00 45.96 5.19
1831 2411 6.469410 AGGACTATATGAGGTCTTCTAGACG 58.531 44.000 0.00 0.00 45.96 4.18
1832 2412 9.223099 GTAAGGACTATATGAGGTCTTCTAGAC 57.777 40.741 0.00 0.00 44.32 2.59
1833 2413 8.946248 TGTAAGGACTATATGAGGTCTTCTAGA 58.054 37.037 0.00 0.00 33.46 2.43
1834 2414 9.747898 ATGTAAGGACTATATGAGGTCTTCTAG 57.252 37.037 0.00 0.00 33.46 2.43
1836 2416 9.440761 AAATGTAAGGACTATATGAGGTCTTCT 57.559 33.333 0.00 0.00 33.46 2.85
1837 2417 9.482627 CAAATGTAAGGACTATATGAGGTCTTC 57.517 37.037 0.00 0.00 33.46 2.87
1838 2418 9.213777 TCAAATGTAAGGACTATATGAGGTCTT 57.786 33.333 0.00 0.00 33.46 3.01
1839 2419 8.783660 TCAAATGTAAGGACTATATGAGGTCT 57.216 34.615 0.00 0.00 33.46 3.85
1840 2420 9.646427 GATCAAATGTAAGGACTATATGAGGTC 57.354 37.037 0.00 0.00 0.00 3.85
1841 2421 9.386122 AGATCAAATGTAAGGACTATATGAGGT 57.614 33.333 0.00 0.00 0.00 3.85
1842 2422 9.868277 GAGATCAAATGTAAGGACTATATGAGG 57.132 37.037 0.00 0.00 0.00 3.86
1851 2431 9.442047 CCCTATATTGAGATCAAATGTAAGGAC 57.558 37.037 0.00 0.00 39.55 3.85
1852 2432 9.170890 ACCCTATATTGAGATCAAATGTAAGGA 57.829 33.333 14.35 0.00 39.55 3.36
1853 2433 9.442047 GACCCTATATTGAGATCAAATGTAAGG 57.558 37.037 0.00 3.72 39.55 2.69
1854 2434 9.442047 GGACCCTATATTGAGATCAAATGTAAG 57.558 37.037 0.00 0.00 39.55 2.34
1855 2435 8.094548 CGGACCCTATATTGAGATCAAATGTAA 58.905 37.037 0.00 0.00 39.55 2.41
1856 2436 7.611770 CGGACCCTATATTGAGATCAAATGTA 58.388 38.462 0.00 0.00 39.55 2.29
1857 2437 6.467677 CGGACCCTATATTGAGATCAAATGT 58.532 40.000 0.00 0.00 39.55 2.71
1858 2438 5.352569 GCGGACCCTATATTGAGATCAAATG 59.647 44.000 0.00 0.00 39.55 2.32
1859 2439 5.249393 AGCGGACCCTATATTGAGATCAAAT 59.751 40.000 0.00 0.00 39.55 2.32
1860 2440 4.593206 AGCGGACCCTATATTGAGATCAAA 59.407 41.667 0.00 0.00 39.55 2.69
1861 2441 4.021104 CAGCGGACCCTATATTGAGATCAA 60.021 45.833 0.00 0.00 40.51 2.57
1862 2442 3.511540 CAGCGGACCCTATATTGAGATCA 59.488 47.826 0.00 0.00 0.00 2.92
1863 2443 3.764434 TCAGCGGACCCTATATTGAGATC 59.236 47.826 0.00 0.00 0.00 2.75
1864 2444 3.511934 GTCAGCGGACCCTATATTGAGAT 59.488 47.826 5.60 0.00 38.12 2.75
1865 2445 2.891580 GTCAGCGGACCCTATATTGAGA 59.108 50.000 5.60 0.00 38.12 3.27
1866 2446 2.628178 TGTCAGCGGACCCTATATTGAG 59.372 50.000 14.62 0.00 43.65 3.02
1867 2447 2.673258 TGTCAGCGGACCCTATATTGA 58.327 47.619 14.62 0.00 43.65 2.57
1868 2448 3.469008 TTGTCAGCGGACCCTATATTG 57.531 47.619 14.62 0.00 43.65 1.90
1869 2449 3.391296 ACATTGTCAGCGGACCCTATATT 59.609 43.478 14.62 0.00 43.65 1.28
1870 2450 2.972713 ACATTGTCAGCGGACCCTATAT 59.027 45.455 14.62 0.00 43.65 0.86
1871 2451 2.102420 CACATTGTCAGCGGACCCTATA 59.898 50.000 14.62 0.00 43.65 1.31
1872 2452 1.134401 CACATTGTCAGCGGACCCTAT 60.134 52.381 14.62 2.87 43.65 2.57
1873 2453 0.249120 CACATTGTCAGCGGACCCTA 59.751 55.000 14.62 0.48 43.65 3.53
1874 2454 1.003355 CACATTGTCAGCGGACCCT 60.003 57.895 14.62 0.00 43.65 4.34
1875 2455 2.040544 CCACATTGTCAGCGGACCC 61.041 63.158 14.62 0.00 43.65 4.46
1876 2456 1.003839 TCCACATTGTCAGCGGACC 60.004 57.895 14.62 0.00 43.65 4.46
1877 2457 0.602638 TGTCCACATTGTCAGCGGAC 60.603 55.000 10.32 10.32 45.24 4.79
1878 2458 0.324614 ATGTCCACATTGTCAGCGGA 59.675 50.000 0.00 0.00 31.37 5.54
1879 2459 2.022764 TATGTCCACATTGTCAGCGG 57.977 50.000 0.00 0.00 37.76 5.52
1880 2460 3.185188 GCTATATGTCCACATTGTCAGCG 59.815 47.826 0.00 0.00 37.76 5.18
1881 2461 3.185188 CGCTATATGTCCACATTGTCAGC 59.815 47.826 0.00 1.94 37.76 4.26
1882 2462 4.620982 TCGCTATATGTCCACATTGTCAG 58.379 43.478 0.00 0.00 37.76 3.51
1883 2463 4.664150 TCGCTATATGTCCACATTGTCA 57.336 40.909 0.00 0.00 37.76 3.58
1884 2464 5.119279 GTCATCGCTATATGTCCACATTGTC 59.881 44.000 0.00 0.00 37.76 3.18
1885 2465 4.991056 GTCATCGCTATATGTCCACATTGT 59.009 41.667 0.00 0.00 37.76 2.71
1886 2466 4.990426 TGTCATCGCTATATGTCCACATTG 59.010 41.667 0.00 0.00 37.76 2.82
1887 2467 5.213891 TGTCATCGCTATATGTCCACATT 57.786 39.130 0.00 0.00 37.76 2.71
1888 2468 4.871933 TGTCATCGCTATATGTCCACAT 57.128 40.909 0.00 0.00 40.22 3.21
1889 2469 4.871933 ATGTCATCGCTATATGTCCACA 57.128 40.909 0.00 0.00 0.00 4.17
1890 2470 5.807520 CCTTATGTCATCGCTATATGTCCAC 59.192 44.000 0.00 0.00 0.00 4.02
1891 2471 5.714806 TCCTTATGTCATCGCTATATGTCCA 59.285 40.000 0.00 0.00 0.00 4.02
1892 2472 6.127591 ACTCCTTATGTCATCGCTATATGTCC 60.128 42.308 0.00 0.00 0.00 4.02
1893 2473 6.857956 ACTCCTTATGTCATCGCTATATGTC 58.142 40.000 0.00 0.00 0.00 3.06
1894 2474 6.842437 ACTCCTTATGTCATCGCTATATGT 57.158 37.500 0.00 0.00 0.00 2.29
1895 2475 6.470556 CGAACTCCTTATGTCATCGCTATATG 59.529 42.308 0.00 0.00 0.00 1.78
1896 2476 6.404844 CCGAACTCCTTATGTCATCGCTATAT 60.405 42.308 0.00 0.00 0.00 0.86
1897 2477 5.106277 CCGAACTCCTTATGTCATCGCTATA 60.106 44.000 0.00 0.00 0.00 1.31
1898 2478 4.321304 CCGAACTCCTTATGTCATCGCTAT 60.321 45.833 0.00 0.00 0.00 2.97
1899 2479 3.004419 CCGAACTCCTTATGTCATCGCTA 59.996 47.826 0.00 0.00 0.00 4.26
1900 2480 2.223829 CCGAACTCCTTATGTCATCGCT 60.224 50.000 0.00 0.00 0.00 4.93
1901 2481 2.128035 CCGAACTCCTTATGTCATCGC 58.872 52.381 0.00 0.00 0.00 4.58
1902 2482 3.438297 ACCGAACTCCTTATGTCATCG 57.562 47.619 0.00 0.00 0.00 3.84
1903 2483 3.797256 CGAACCGAACTCCTTATGTCATC 59.203 47.826 0.00 0.00 0.00 2.92
1904 2484 3.430374 CCGAACCGAACTCCTTATGTCAT 60.430 47.826 0.00 0.00 0.00 3.06
1905 2485 2.094390 CCGAACCGAACTCCTTATGTCA 60.094 50.000 0.00 0.00 0.00 3.58
1906 2486 2.094338 ACCGAACCGAACTCCTTATGTC 60.094 50.000 0.00 0.00 0.00 3.06
1907 2487 1.897802 ACCGAACCGAACTCCTTATGT 59.102 47.619 0.00 0.00 0.00 2.29
1908 2488 2.094390 TGACCGAACCGAACTCCTTATG 60.094 50.000 0.00 0.00 0.00 1.90
1909 2489 2.173519 TGACCGAACCGAACTCCTTAT 58.826 47.619 0.00 0.00 0.00 1.73
1910 2490 1.619654 TGACCGAACCGAACTCCTTA 58.380 50.000 0.00 0.00 0.00 2.69
1911 2491 0.974383 ATGACCGAACCGAACTCCTT 59.026 50.000 0.00 0.00 0.00 3.36
1912 2492 0.974383 AATGACCGAACCGAACTCCT 59.026 50.000 0.00 0.00 0.00 3.69
1913 2493 1.067071 AGAATGACCGAACCGAACTCC 60.067 52.381 0.00 0.00 0.00 3.85
1914 2494 2.365408 AGAATGACCGAACCGAACTC 57.635 50.000 0.00 0.00 0.00 3.01
1915 2495 2.833631 AAGAATGACCGAACCGAACT 57.166 45.000 0.00 0.00 0.00 3.01
1916 2496 3.364664 GGAAAAGAATGACCGAACCGAAC 60.365 47.826 0.00 0.00 0.00 3.95
1917 2497 2.809696 GGAAAAGAATGACCGAACCGAA 59.190 45.455 0.00 0.00 0.00 4.30
1918 2498 2.038033 AGGAAAAGAATGACCGAACCGA 59.962 45.455 0.00 0.00 0.00 4.69
1919 2499 2.423577 AGGAAAAGAATGACCGAACCG 58.576 47.619 0.00 0.00 0.00 4.44
1920 2500 3.818773 TGAAGGAAAAGAATGACCGAACC 59.181 43.478 0.00 0.00 0.00 3.62
1921 2501 4.515567 AGTGAAGGAAAAGAATGACCGAAC 59.484 41.667 0.00 0.00 0.00 3.95
1922 2502 4.714632 AGTGAAGGAAAAGAATGACCGAA 58.285 39.130 0.00 0.00 0.00 4.30
1923 2503 4.040461 AGAGTGAAGGAAAAGAATGACCGA 59.960 41.667 0.00 0.00 0.00 4.69
1924 2504 4.153117 CAGAGTGAAGGAAAAGAATGACCG 59.847 45.833 0.00 0.00 0.00 4.79
1925 2505 4.083057 GCAGAGTGAAGGAAAAGAATGACC 60.083 45.833 0.00 0.00 0.00 4.02
1926 2506 4.759183 AGCAGAGTGAAGGAAAAGAATGAC 59.241 41.667 0.00 0.00 0.00 3.06
1927 2507 4.758674 CAGCAGAGTGAAGGAAAAGAATGA 59.241 41.667 0.00 0.00 0.00 2.57
1928 2508 4.518211 ACAGCAGAGTGAAGGAAAAGAATG 59.482 41.667 0.00 0.00 0.00 2.67
1929 2509 4.723309 ACAGCAGAGTGAAGGAAAAGAAT 58.277 39.130 0.00 0.00 0.00 2.40
1930 2510 4.130118 GACAGCAGAGTGAAGGAAAAGAA 58.870 43.478 0.00 0.00 0.00 2.52
1931 2511 3.495100 GGACAGCAGAGTGAAGGAAAAGA 60.495 47.826 0.00 0.00 0.00 2.52
1932 2512 2.810852 GGACAGCAGAGTGAAGGAAAAG 59.189 50.000 0.00 0.00 0.00 2.27
1933 2513 2.806745 CGGACAGCAGAGTGAAGGAAAA 60.807 50.000 0.00 0.00 0.00 2.29
1934 2514 1.270305 CGGACAGCAGAGTGAAGGAAA 60.270 52.381 0.00 0.00 0.00 3.13
1935 2515 0.318441 CGGACAGCAGAGTGAAGGAA 59.682 55.000 0.00 0.00 0.00 3.36
1936 2516 1.536073 CCGGACAGCAGAGTGAAGGA 61.536 60.000 0.00 0.00 0.00 3.36
1937 2517 1.079543 CCGGACAGCAGAGTGAAGG 60.080 63.158 0.00 0.00 0.00 3.46
1938 2518 0.389166 GACCGGACAGCAGAGTGAAG 60.389 60.000 9.46 0.00 0.00 3.02
1939 2519 1.112916 TGACCGGACAGCAGAGTGAA 61.113 55.000 9.46 0.00 0.00 3.18
1940 2520 1.530655 TGACCGGACAGCAGAGTGA 60.531 57.895 9.46 0.00 0.00 3.41
1941 2521 1.373497 GTGACCGGACAGCAGAGTG 60.373 63.158 9.46 0.00 0.00 3.51
1942 2522 2.574955 GGTGACCGGACAGCAGAGT 61.575 63.158 27.15 0.00 38.05 3.24
1943 2523 2.262915 GGTGACCGGACAGCAGAG 59.737 66.667 27.15 0.00 38.05 3.35
1944 2524 3.680786 CGGTGACCGGACAGCAGA 61.681 66.667 29.93 0.00 44.15 4.26
1969 2549 3.425938 CTCAAACATCCGCGAGCGC 62.426 63.158 8.23 0.00 38.24 5.92
1970 2550 2.697425 CTCAAACATCCGCGAGCG 59.303 61.111 8.23 10.86 39.44 5.03
1971 2551 1.424493 CTCCTCAAACATCCGCGAGC 61.424 60.000 8.23 0.00 0.00 5.03
1972 2552 0.807667 CCTCCTCAAACATCCGCGAG 60.808 60.000 8.23 0.00 0.00 5.03
1973 2553 1.218047 CCTCCTCAAACATCCGCGA 59.782 57.895 8.23 0.00 0.00 5.87
1974 2554 2.464459 GCCTCCTCAAACATCCGCG 61.464 63.158 0.00 0.00 0.00 6.46
1975 2555 2.115291 GGCCTCCTCAAACATCCGC 61.115 63.158 0.00 0.00 0.00 5.54
1976 2556 1.815421 CGGCCTCCTCAAACATCCG 60.815 63.158 0.00 0.00 0.00 4.18
1977 2557 1.452108 CCGGCCTCCTCAAACATCC 60.452 63.158 0.00 0.00 0.00 3.51
1978 2558 1.452108 CCCGGCCTCCTCAAACATC 60.452 63.158 0.00 0.00 0.00 3.06
1979 2559 2.677228 CCCGGCCTCCTCAAACAT 59.323 61.111 0.00 0.00 0.00 2.71
1980 2560 3.646715 CCCCGGCCTCCTCAAACA 61.647 66.667 0.00 0.00 0.00 2.83
1981 2561 3.205851 AACCCCGGCCTCCTCAAAC 62.206 63.158 0.00 0.00 0.00 2.93
1982 2562 2.856988 AACCCCGGCCTCCTCAAA 60.857 61.111 0.00 0.00 0.00 2.69
1983 2563 3.646715 CAACCCCGGCCTCCTCAA 61.647 66.667 0.00 0.00 0.00 3.02
1984 2564 3.549433 TACAACCCCGGCCTCCTCA 62.549 63.158 0.00 0.00 0.00 3.86
1985 2565 2.686106 TACAACCCCGGCCTCCTC 60.686 66.667 0.00 0.00 0.00 3.71
1986 2566 2.547123 ATCTACAACCCCGGCCTCCT 62.547 60.000 0.00 0.00 0.00 3.69
1987 2567 2.070650 ATCTACAACCCCGGCCTCC 61.071 63.158 0.00 0.00 0.00 4.30
1988 2568 1.146263 CATCTACAACCCCGGCCTC 59.854 63.158 0.00 0.00 0.00 4.70
1989 2569 3.043999 GCATCTACAACCCCGGCCT 62.044 63.158 0.00 0.00 0.00 5.19
1990 2570 2.516225 GCATCTACAACCCCGGCC 60.516 66.667 0.00 0.00 0.00 6.13
1991 2571 1.077716 AAGCATCTACAACCCCGGC 60.078 57.895 0.00 0.00 0.00 6.13
1992 2572 0.810031 CGAAGCATCTACAACCCCGG 60.810 60.000 0.00 0.00 0.00 5.73
1993 2573 2.677971 CGAAGCATCTACAACCCCG 58.322 57.895 0.00 0.00 0.00 5.73
2007 2587 3.604875 TTTCTAGGTTGGTAGGCGAAG 57.395 47.619 0.00 0.00 0.00 3.79
2008 2588 4.354893 TTTTTCTAGGTTGGTAGGCGAA 57.645 40.909 0.00 0.00 0.00 4.70
2026 2606 2.466846 ACACCCTGCTCCAAAGTTTTT 58.533 42.857 0.00 0.00 0.00 1.94
2027 2607 2.159179 ACACCCTGCTCCAAAGTTTT 57.841 45.000 0.00 0.00 0.00 2.43
2028 2608 2.583143 GTACACCCTGCTCCAAAGTTT 58.417 47.619 0.00 0.00 0.00 2.66
2029 2609 1.202891 GGTACACCCTGCTCCAAAGTT 60.203 52.381 0.00 0.00 0.00 2.66
2030 2610 0.400594 GGTACACCCTGCTCCAAAGT 59.599 55.000 0.00 0.00 0.00 2.66
2031 2611 0.400213 TGGTACACCCTGCTCCAAAG 59.600 55.000 0.00 0.00 34.29 2.77
2032 2612 2.545969 TGGTACACCCTGCTCCAAA 58.454 52.632 0.00 0.00 34.29 3.28
2033 2613 4.322681 TGGTACACCCTGCTCCAA 57.677 55.556 0.00 0.00 34.29 3.53
2044 2624 4.614306 CGTATCAAGACAACTCGTGGTACA 60.614 45.833 7.52 0.00 40.58 2.90
2045 2625 3.850273 CGTATCAAGACAACTCGTGGTAC 59.150 47.826 0.00 0.00 38.46 3.34
2046 2626 3.671433 GCGTATCAAGACAACTCGTGGTA 60.671 47.826 0.00 0.00 0.00 3.25
2047 2627 2.925306 GCGTATCAAGACAACTCGTGGT 60.925 50.000 0.00 0.00 0.00 4.16
2056 2636 1.447140 GTGCCCGCGTATCAAGACA 60.447 57.895 4.92 0.00 0.00 3.41
2060 2640 2.507547 GTCGTGCCCGCGTATCAA 60.508 61.111 4.92 0.00 0.00 2.57
2079 2659 1.010462 CACGATGCATGCCATGTCG 60.010 57.895 16.68 20.12 35.62 4.35
2092 2672 0.320771 GAGTGAACTGGGTGCACGAT 60.321 55.000 11.45 0.00 46.04 3.73
2095 2675 1.680338 AAAGAGTGAACTGGGTGCAC 58.320 50.000 8.80 8.80 42.10 4.57
2101 2681 5.816682 AGGGGTAAATAAAGAGTGAACTGG 58.183 41.667 0.00 0.00 0.00 4.00
2135 2715 6.147328 ACCGCTCAAGTAAATAAAGAGTGTTC 59.853 38.462 0.00 0.00 35.63 3.18
2160 2747 1.773054 GCGATGAGGCTCGTCTCGTA 61.773 60.000 28.77 3.09 40.73 3.43
2190 2778 1.229209 GGACTGGACCAGGGTGAGA 60.229 63.158 25.34 0.00 35.51 3.27
2198 2786 1.841302 GCATGACCTGGACTGGACCA 61.841 60.000 0.00 0.00 38.33 4.02
2218 2806 4.379221 GACTCATCGTCGGAACCG 57.621 61.111 6.94 6.94 41.35 4.44
2284 2872 1.889829 CCTCTCTCCACTCACTCGTTT 59.110 52.381 0.00 0.00 0.00 3.60
2324 2912 2.293399 GCCTTCCGCAATTATTACCCTG 59.707 50.000 0.00 0.00 37.47 4.45
2460 3070 1.097547 CCAAAGAATCTCGGGCGCAT 61.098 55.000 10.83 0.00 0.00 4.73
2510 3120 1.827399 AAGGTATATGCCTCCCCGCG 61.827 60.000 13.27 0.00 38.03 6.46
2527 3137 4.410400 GTGGTGGGCGGGGAGAAG 62.410 72.222 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.