Multiple sequence alignment - TraesCS3B01G294000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G294000 chr3B 100.000 2438 0 0 1 2438 473176575 473179012 0.000000e+00 4503
1 TraesCS3B01G294000 chr3A 88.510 1993 91 68 220 2116 484100171 484102121 0.000000e+00 2285
2 TraesCS3B01G294000 chr3A 93.871 310 18 1 2130 2438 227370214 227370523 1.320000e-127 466
3 TraesCS3B01G294000 chr3D 87.582 1216 54 36 530 1676 363263427 363264614 0.000000e+00 1319
4 TraesCS3B01G294000 chr3D 92.424 462 30 2 1674 2130 363264653 363265114 0.000000e+00 654
5 TraesCS3B01G294000 chr3D 86.256 422 25 16 83 476 363263011 363263427 6.230000e-116 427
6 TraesCS3B01G294000 chr5A 96.417 307 10 1 2133 2438 496035294 496034988 2.800000e-139 505
7 TraesCS3B01G294000 chr7B 95.806 310 12 1 2130 2438 570375357 570375666 1.300000e-137 499
8 TraesCS3B01G294000 chr6B 95.806 310 12 1 2130 2438 610080871 610081180 1.300000e-137 499
9 TraesCS3B01G294000 chr4A 95.440 307 13 1 2133 2438 742706672 742706978 2.820000e-134 488
10 TraesCS3B01G294000 chr1D 95.161 310 14 1 2130 2438 411518654 411518963 2.820000e-134 488
11 TraesCS3B01G294000 chr1D 88.411 302 33 2 2138 2438 268032280 268031980 1.780000e-96 363
12 TraesCS3B01G294000 chr2A 94.194 310 17 1 2130 2438 8389642 8389951 2.840000e-129 472
13 TraesCS3B01G294000 chr7A 92.581 310 22 1 2130 2438 52660954 52661263 6.190000e-121 444


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G294000 chr3B 473176575 473179012 2437 False 4503 4503 100.000 1 2438 1 chr3B.!!$F1 2437
1 TraesCS3B01G294000 chr3A 484100171 484102121 1950 False 2285 2285 88.510 220 2116 1 chr3A.!!$F2 1896
2 TraesCS3B01G294000 chr3D 363263011 363265114 2103 False 800 1319 88.754 83 2130 3 chr3D.!!$F1 2047

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
190 214 0.108424 AGTGCAGCTAAGGAGAAGCG 60.108 55.0 0.0 0.0 44.87 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2184 2402 0.17915 GAGTCTAGTCCACGCTGCTG 60.179 60.0 0.0 0.0 0.0 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.905959 TCACTCGTACACGTACATGG 57.094 50.000 8.02 0.26 40.80 3.66
21 22 2.153645 TCACTCGTACACGTACATGGT 58.846 47.619 8.02 0.81 40.80 3.55
22 23 2.553602 TCACTCGTACACGTACATGGTT 59.446 45.455 8.02 0.00 40.80 3.67
23 24 2.659757 CACTCGTACACGTACATGGTTG 59.340 50.000 8.02 0.00 40.80 3.77
24 25 1.652124 CTCGTACACGTACATGGTTGC 59.348 52.381 8.02 0.00 40.80 4.17
25 26 1.270274 TCGTACACGTACATGGTTGCT 59.730 47.619 8.02 0.00 40.80 3.91
26 27 2.063266 CGTACACGTACATGGTTGCTT 58.937 47.619 8.02 0.00 35.87 3.91
27 28 2.159894 CGTACACGTACATGGTTGCTTG 60.160 50.000 8.02 0.00 35.87 4.01
28 29 1.961793 ACACGTACATGGTTGCTTGT 58.038 45.000 0.00 0.00 0.00 3.16
29 30 1.871039 ACACGTACATGGTTGCTTGTC 59.129 47.619 0.00 0.00 0.00 3.18
30 31 1.136363 CACGTACATGGTTGCTTGTCG 60.136 52.381 0.00 0.00 0.00 4.35
31 32 1.144969 CGTACATGGTTGCTTGTCGT 58.855 50.000 0.00 0.00 0.00 4.34
32 33 2.288334 ACGTACATGGTTGCTTGTCGTA 60.288 45.455 0.00 0.00 32.19 3.43
33 34 2.927477 CGTACATGGTTGCTTGTCGTAT 59.073 45.455 0.00 0.00 0.00 3.06
34 35 3.000078 CGTACATGGTTGCTTGTCGTATC 60.000 47.826 0.00 0.00 0.00 2.24
35 36 3.052455 ACATGGTTGCTTGTCGTATCA 57.948 42.857 0.00 0.00 0.00 2.15
36 37 3.407698 ACATGGTTGCTTGTCGTATCAA 58.592 40.909 0.00 0.00 0.00 2.57
37 38 3.818210 ACATGGTTGCTTGTCGTATCAAA 59.182 39.130 0.00 0.00 0.00 2.69
38 39 4.458989 ACATGGTTGCTTGTCGTATCAAAT 59.541 37.500 0.00 0.00 0.00 2.32
39 40 4.678509 TGGTTGCTTGTCGTATCAAATC 57.321 40.909 0.00 0.00 0.00 2.17
40 41 4.068599 TGGTTGCTTGTCGTATCAAATCA 58.931 39.130 0.00 0.00 0.00 2.57
41 42 4.699735 TGGTTGCTTGTCGTATCAAATCAT 59.300 37.500 0.00 0.00 0.00 2.45
42 43 5.030295 GGTTGCTTGTCGTATCAAATCATG 58.970 41.667 0.00 0.00 0.00 3.07
43 44 4.880886 TGCTTGTCGTATCAAATCATGG 57.119 40.909 0.00 0.00 0.00 3.66
44 45 3.065233 TGCTTGTCGTATCAAATCATGGC 59.935 43.478 0.00 0.00 0.00 4.40
45 46 3.846023 GCTTGTCGTATCAAATCATGGCG 60.846 47.826 0.00 0.00 0.00 5.69
46 47 2.899976 TGTCGTATCAAATCATGGCGT 58.100 42.857 0.00 0.00 0.00 5.68
47 48 4.048241 TGTCGTATCAAATCATGGCGTA 57.952 40.909 0.00 0.00 0.00 4.42
48 49 4.627058 TGTCGTATCAAATCATGGCGTAT 58.373 39.130 0.00 0.00 0.00 3.06
49 50 5.053811 TGTCGTATCAAATCATGGCGTATT 58.946 37.500 0.00 0.00 0.00 1.89
50 51 5.525745 TGTCGTATCAAATCATGGCGTATTT 59.474 36.000 0.00 0.00 0.00 1.40
51 52 6.037720 TGTCGTATCAAATCATGGCGTATTTT 59.962 34.615 0.00 0.00 0.00 1.82
52 53 6.356977 GTCGTATCAAATCATGGCGTATTTTG 59.643 38.462 0.00 7.04 0.00 2.44
53 54 6.258947 TCGTATCAAATCATGGCGTATTTTGA 59.741 34.615 14.75 14.75 39.72 2.69
54 55 6.909895 CGTATCAAATCATGGCGTATTTTGAA 59.090 34.615 15.80 7.05 39.10 2.69
55 56 7.112009 CGTATCAAATCATGGCGTATTTTGAAG 59.888 37.037 15.80 9.57 39.10 3.02
56 57 6.507958 TCAAATCATGGCGTATTTTGAAGA 57.492 33.333 11.62 0.00 34.39 2.87
57 58 7.099266 TCAAATCATGGCGTATTTTGAAGAT 57.901 32.000 11.62 0.00 34.39 2.40
58 59 7.546358 TCAAATCATGGCGTATTTTGAAGATT 58.454 30.769 11.62 0.00 34.39 2.40
59 60 8.681806 TCAAATCATGGCGTATTTTGAAGATTA 58.318 29.630 11.62 0.00 34.39 1.75
60 61 9.467258 CAAATCATGGCGTATTTTGAAGATTAT 57.533 29.630 7.43 0.00 30.69 1.28
61 62 9.683069 AAATCATGGCGTATTTTGAAGATTATC 57.317 29.630 0.00 0.00 0.00 1.75
62 63 6.887368 TCATGGCGTATTTTGAAGATTATCG 58.113 36.000 0.00 0.00 0.00 2.92
63 64 6.481976 TCATGGCGTATTTTGAAGATTATCGT 59.518 34.615 0.00 0.00 0.00 3.73
64 65 7.654116 TCATGGCGTATTTTGAAGATTATCGTA 59.346 33.333 0.00 0.00 0.00 3.43
65 66 7.402811 TGGCGTATTTTGAAGATTATCGTAG 57.597 36.000 0.00 0.00 0.00 3.51
66 67 6.982141 TGGCGTATTTTGAAGATTATCGTAGT 59.018 34.615 0.00 0.00 0.00 2.73
67 68 7.493320 TGGCGTATTTTGAAGATTATCGTAGTT 59.507 33.333 0.00 0.00 0.00 2.24
68 69 8.333186 GGCGTATTTTGAAGATTATCGTAGTTT 58.667 33.333 0.00 0.00 0.00 2.66
69 70 9.354544 GCGTATTTTGAAGATTATCGTAGTTTC 57.645 33.333 0.00 0.00 0.00 2.78
70 71 9.845305 CGTATTTTGAAGATTATCGTAGTTTCC 57.155 33.333 0.00 0.00 0.00 3.13
75 76 8.842358 TTGAAGATTATCGTAGTTTCCTTTGT 57.158 30.769 0.00 0.00 0.00 2.83
76 77 8.251750 TGAAGATTATCGTAGTTTCCTTTGTG 57.748 34.615 0.00 0.00 0.00 3.33
77 78 6.663944 AGATTATCGTAGTTTCCTTTGTGC 57.336 37.500 0.00 0.00 0.00 4.57
78 79 4.914312 TTATCGTAGTTTCCTTTGTGCG 57.086 40.909 0.00 0.00 0.00 5.34
79 80 1.504359 TCGTAGTTTCCTTTGTGCGG 58.496 50.000 0.00 0.00 0.00 5.69
80 81 0.110373 CGTAGTTTCCTTTGTGCGGC 60.110 55.000 0.00 0.00 0.00 6.53
81 82 1.235724 GTAGTTTCCTTTGTGCGGCT 58.764 50.000 0.00 0.00 0.00 5.52
82 83 1.069227 GTAGTTTCCTTTGTGCGGCTG 60.069 52.381 0.00 0.00 0.00 4.85
83 84 0.751643 AGTTTCCTTTGTGCGGCTGT 60.752 50.000 0.00 0.00 0.00 4.40
84 85 0.948678 GTTTCCTTTGTGCGGCTGTA 59.051 50.000 0.00 0.00 0.00 2.74
85 86 1.069227 GTTTCCTTTGTGCGGCTGTAG 60.069 52.381 0.00 0.00 0.00 2.74
100 101 1.935873 CTGTAGTCATTGTGATGCCGG 59.064 52.381 0.00 0.00 33.14 6.13
102 103 0.463654 TAGTCATTGTGATGCCGGGC 60.464 55.000 13.32 13.32 33.14 6.13
109 110 0.751277 TGTGATGCCGGGCAATTAGG 60.751 55.000 27.70 0.00 43.62 2.69
119 120 2.333926 GGGCAATTAGGTTTTTCGTGC 58.666 47.619 0.00 0.00 0.00 5.34
125 126 0.533308 TAGGTTTTTCGTGCCGTGCT 60.533 50.000 0.00 0.00 0.00 4.40
130 131 0.531090 TTTTCGTGCCGTGCTGTACT 60.531 50.000 0.00 0.00 0.00 2.73
150 151 3.262405 ACTTTGGCCATTCATTCATTGCT 59.738 39.130 6.09 0.00 0.00 3.91
161 162 1.462616 TTCATTGCTAATGCTGCCGT 58.537 45.000 0.00 0.00 38.77 5.68
169 170 1.083806 TAATGCTGCCGTCGCTGAAG 61.084 55.000 0.00 0.00 36.08 3.02
190 214 0.108424 AGTGCAGCTAAGGAGAAGCG 60.108 55.000 0.00 0.00 44.87 4.68
200 224 2.233305 AGGAGAAGCGAAAGGTAGGA 57.767 50.000 0.00 0.00 43.76 2.94
201 225 2.104170 AGGAGAAGCGAAAGGTAGGAG 58.896 52.381 0.00 0.00 43.76 3.69
202 226 1.137282 GGAGAAGCGAAAGGTAGGAGG 59.863 57.143 0.00 0.00 43.76 4.30
239 271 3.326006 ACTCCATGACAATGACAGTGACT 59.674 43.478 10.34 0.00 35.67 3.41
277 309 2.759114 CCACCACCAGTCCAGCAT 59.241 61.111 0.00 0.00 0.00 3.79
389 427 4.849329 CGTGCGGCTACGTCCTCC 62.849 72.222 14.04 0.00 43.45 4.30
390 428 3.755628 GTGCGGCTACGTCCTCCA 61.756 66.667 0.00 0.00 43.45 3.86
391 429 3.449227 TGCGGCTACGTCCTCCAG 61.449 66.667 0.00 0.00 43.45 3.86
392 430 3.450115 GCGGCTACGTCCTCCAGT 61.450 66.667 0.00 0.00 43.45 4.00
393 431 2.799371 CGGCTACGTCCTCCAGTC 59.201 66.667 0.00 0.00 34.81 3.51
394 432 2.772691 CGGCTACGTCCTCCAGTCC 61.773 68.421 0.00 0.00 34.81 3.85
395 433 2.424733 GGCTACGTCCTCCAGTCCC 61.425 68.421 0.00 0.00 0.00 4.46
396 434 1.681327 GCTACGTCCTCCAGTCCCA 60.681 63.158 0.00 0.00 0.00 4.37
399 437 0.178955 TACGTCCTCCAGTCCCACAA 60.179 55.000 0.00 0.00 0.00 3.33
412 450 0.754957 CCCACAAAGCACAGTCCCAA 60.755 55.000 0.00 0.00 0.00 4.12
468 512 4.806342 TTAGAGCGTTTTGACCAAGTTC 57.194 40.909 0.00 0.00 0.00 3.01
541 596 0.738389 CCACACCGTCAGTTTTGCTT 59.262 50.000 0.00 0.00 0.00 3.91
574 636 1.206610 AGATCTTGCGAGTGTGATGCT 59.793 47.619 0.00 0.00 0.00 3.79
668 758 7.021196 CCCGTAACAACACTTTAATCAATCTG 58.979 38.462 0.00 0.00 0.00 2.90
729 819 4.162690 CGGCTCAGTGGCTACCCC 62.163 72.222 0.00 0.00 39.32 4.95
781 871 2.334838 CTACCAGTAACCAACAGCGAC 58.665 52.381 0.00 0.00 0.00 5.19
831 921 0.317020 GCTTTCGTGAGCACCACAAC 60.317 55.000 9.43 0.00 45.98 3.32
835 925 2.148916 TCGTGAGCACCACAACTTAG 57.851 50.000 9.43 0.00 45.98 2.18
844 934 2.233922 CACCACAACTTAGATCCGAGGT 59.766 50.000 0.00 0.00 0.00 3.85
849 939 3.767673 ACAACTTAGATCCGAGGTAGCAA 59.232 43.478 0.00 0.00 0.00 3.91
850 940 4.142138 ACAACTTAGATCCGAGGTAGCAAG 60.142 45.833 0.00 0.00 0.00 4.01
851 941 3.899726 ACTTAGATCCGAGGTAGCAAGA 58.100 45.455 0.00 0.00 0.00 3.02
852 942 3.633065 ACTTAGATCCGAGGTAGCAAGAC 59.367 47.826 0.00 0.00 0.00 3.01
854 944 2.028130 AGATCCGAGGTAGCAAGACAG 58.972 52.381 0.00 0.00 0.00 3.51
872 962 2.903135 ACAGGTTTCTTGAGAGAGAGGG 59.097 50.000 0.00 0.00 32.44 4.30
873 963 3.169099 CAGGTTTCTTGAGAGAGAGGGA 58.831 50.000 0.00 0.00 32.44 4.20
899 989 1.916777 TTTCCTCCCTCCCACGACC 60.917 63.158 0.00 0.00 0.00 4.79
900 990 2.396651 TTTCCTCCCTCCCACGACCT 62.397 60.000 0.00 0.00 0.00 3.85
970 1063 1.890041 CACGAAACCCACGAGCCAA 60.890 57.895 0.00 0.00 34.70 4.52
978 1071 1.672356 CCACGAGCCAAGGACAAGG 60.672 63.158 0.00 0.00 0.00 3.61
979 1072 1.672356 CACGAGCCAAGGACAAGGG 60.672 63.158 0.00 0.00 0.00 3.95
981 1074 1.374947 CGAGCCAAGGACAAGGGAA 59.625 57.895 0.00 0.00 0.00 3.97
982 1075 0.250727 CGAGCCAAGGACAAGGGAAA 60.251 55.000 0.00 0.00 0.00 3.13
983 1076 1.539157 GAGCCAAGGACAAGGGAAAG 58.461 55.000 0.00 0.00 0.00 2.62
984 1077 0.540597 AGCCAAGGACAAGGGAAAGC 60.541 55.000 0.00 0.00 0.00 3.51
985 1078 0.827507 GCCAAGGACAAGGGAAAGCA 60.828 55.000 0.00 0.00 0.00 3.91
987 1080 0.600057 CAAGGACAAGGGAAAGCAGC 59.400 55.000 0.00 0.00 0.00 5.25
988 1081 0.890996 AAGGACAAGGGAAAGCAGCG 60.891 55.000 0.00 0.00 0.00 5.18
990 1083 2.982744 GACAAGGGAAAGCAGCGGC 61.983 63.158 0.00 0.00 41.61 6.53
991 1084 3.752339 CAAGGGAAAGCAGCGGCC 61.752 66.667 4.82 0.00 42.56 6.13
995 1088 3.361977 GGAAAGCAGCGGCCGAAA 61.362 61.111 33.48 0.00 42.56 3.46
996 1089 2.126850 GAAAGCAGCGGCCGAAAC 60.127 61.111 33.48 16.97 42.56 2.78
1375 1473 2.885644 CAATGGCGGACGAGGACG 60.886 66.667 0.00 0.00 45.75 4.79
1473 1578 8.635765 TGTTAGTTAGGCTGATTGATTTTTCT 57.364 30.769 0.00 0.00 0.00 2.52
1474 1579 8.730680 TGTTAGTTAGGCTGATTGATTTTTCTC 58.269 33.333 0.00 0.00 0.00 2.87
1475 1580 6.765915 AGTTAGGCTGATTGATTTTTCTCC 57.234 37.500 0.00 0.00 0.00 3.71
1476 1581 6.248433 AGTTAGGCTGATTGATTTTTCTCCA 58.752 36.000 0.00 0.00 0.00 3.86
1477 1582 6.376581 AGTTAGGCTGATTGATTTTTCTCCAG 59.623 38.462 0.00 0.00 0.00 3.86
1510 1615 2.216898 GTGATCTGCCAAGTAGGATGC 58.783 52.381 0.00 0.00 41.22 3.91
1526 1634 1.421410 ATGCGCCGTTTCGATCTGTC 61.421 55.000 4.18 0.00 0.00 3.51
1539 1647 0.032615 ATCTGTCCGGCCTCTCTCTT 60.033 55.000 0.00 0.00 0.00 2.85
1544 1652 1.032657 TCCGGCCTCTCTCTTTCTCG 61.033 60.000 0.00 0.00 0.00 4.04
1547 1655 1.067495 CGGCCTCTCTCTTTCTCGTTT 60.067 52.381 0.00 0.00 0.00 3.60
1548 1656 2.612604 GGCCTCTCTCTTTCTCGTTTC 58.387 52.381 0.00 0.00 0.00 2.78
1551 1659 3.306433 GCCTCTCTCTTTCTCGTTTCCTT 60.306 47.826 0.00 0.00 0.00 3.36
1554 1662 4.884247 TCTCTCTTTCTCGTTTCCTTTCC 58.116 43.478 0.00 0.00 0.00 3.13
1555 1663 4.589374 TCTCTCTTTCTCGTTTCCTTTCCT 59.411 41.667 0.00 0.00 0.00 3.36
1557 1665 5.681639 TCTCTTTCTCGTTTCCTTTCCTTT 58.318 37.500 0.00 0.00 0.00 3.11
1559 1667 6.038271 TCTCTTTCTCGTTTCCTTTCCTTTTG 59.962 38.462 0.00 0.00 0.00 2.44
1560 1668 5.883673 TCTTTCTCGTTTCCTTTCCTTTTGA 59.116 36.000 0.00 0.00 0.00 2.69
1561 1669 6.546034 TCTTTCTCGTTTCCTTTCCTTTTGAT 59.454 34.615 0.00 0.00 0.00 2.57
1562 1670 5.689383 TCTCGTTTCCTTTCCTTTTGATG 57.311 39.130 0.00 0.00 0.00 3.07
1579 1713 0.527817 ATGATTCTCGCCGTCGGTTC 60.528 55.000 13.94 0.00 36.13 3.62
1629 1763 4.507388 CAGAAATTTCGGCAAAGAAGCAAA 59.493 37.500 12.42 0.00 35.83 3.68
1685 1886 6.624352 TGCCTTGTCTAGATGATTTATTGC 57.376 37.500 0.00 0.00 0.00 3.56
1724 1934 6.978080 CCAAAAATAAAGCCGCATTACTGTAT 59.022 34.615 0.00 0.00 0.00 2.29
1725 1935 7.167468 CCAAAAATAAAGCCGCATTACTGTATC 59.833 37.037 0.00 0.00 0.00 2.24
1747 1957 2.919772 TACCTCTCCCATCACTGTCA 57.080 50.000 0.00 0.00 0.00 3.58
1776 1986 3.695830 AACACTGGTAGTGGTATGGTG 57.304 47.619 12.98 0.00 45.86 4.17
1813 2023 5.047802 TCTCATGGAAAGCTGGTGAAAATTC 60.048 40.000 0.00 0.00 0.00 2.17
1819 2029 2.427506 AGCTGGTGAAAATTCCGAGTC 58.572 47.619 0.00 0.00 0.00 3.36
1931 2143 6.692232 ACAACGTCTTAATTCTCTCTTTCG 57.308 37.500 0.00 0.00 0.00 3.46
1957 2169 5.127194 TGAGAGGCCACTGTAATTACTAGTG 59.873 44.000 25.49 25.49 41.04 2.74
2005 2223 1.003331 CACGGCGAGCAGTTAACAAAA 60.003 47.619 16.62 0.00 0.00 2.44
2038 2256 0.681733 CTATCCCCACCTGGACGATG 59.318 60.000 0.00 0.00 37.20 3.84
2117 2335 3.634397 TCCTAGTTTTGGAGCATCAGG 57.366 47.619 0.00 0.00 36.25 3.86
2123 2341 3.091545 GTTTTGGAGCATCAGGGAATCA 58.908 45.455 0.00 0.00 36.25 2.57
2130 2348 1.019673 CATCAGGGAATCAACAGCCG 58.980 55.000 0.00 0.00 0.00 5.52
2131 2349 0.749454 ATCAGGGAATCAACAGCCGC 60.749 55.000 0.00 0.00 0.00 6.53
2132 2350 1.675310 CAGGGAATCAACAGCCGCA 60.675 57.895 0.00 0.00 0.00 5.69
2133 2351 1.675641 AGGGAATCAACAGCCGCAC 60.676 57.895 0.00 0.00 0.00 5.34
2134 2352 1.675641 GGGAATCAACAGCCGCACT 60.676 57.895 0.00 0.00 0.00 4.40
2135 2353 1.244019 GGGAATCAACAGCCGCACTT 61.244 55.000 0.00 0.00 0.00 3.16
2136 2354 0.598065 GGAATCAACAGCCGCACTTT 59.402 50.000 0.00 0.00 0.00 2.66
2137 2355 1.000274 GGAATCAACAGCCGCACTTTT 60.000 47.619 0.00 0.00 0.00 2.27
2138 2356 2.053627 GAATCAACAGCCGCACTTTTG 58.946 47.619 0.00 0.00 37.40 2.44
2139 2357 0.314935 ATCAACAGCCGCACTTTTGG 59.685 50.000 0.00 0.00 36.81 3.28
2140 2358 1.300080 CAACAGCCGCACTTTTGGG 60.300 57.895 0.00 0.00 33.26 4.12
2141 2359 1.454847 AACAGCCGCACTTTTGGGA 60.455 52.632 0.00 0.00 37.91 4.37
2142 2360 1.734388 AACAGCCGCACTTTTGGGAC 61.734 55.000 0.00 0.00 37.91 4.46
2143 2361 2.192861 CAGCCGCACTTTTGGGACA 61.193 57.895 0.00 0.00 37.91 4.02
2144 2362 2.193536 AGCCGCACTTTTGGGACAC 61.194 57.895 0.00 0.00 39.29 3.67
2145 2363 2.485795 GCCGCACTTTTGGGACACA 61.486 57.895 0.00 0.00 39.29 3.72
2146 2364 1.358759 CCGCACTTTTGGGACACAC 59.641 57.895 0.00 0.00 39.29 3.82
2147 2365 1.380403 CCGCACTTTTGGGACACACA 61.380 55.000 0.00 0.00 39.29 3.72
2148 2366 0.248458 CGCACTTTTGGGACACACAC 60.248 55.000 0.00 0.00 39.29 3.82
2149 2367 0.814457 GCACTTTTGGGACACACACA 59.186 50.000 0.00 0.00 39.29 3.72
2150 2368 1.203523 GCACTTTTGGGACACACACAA 59.796 47.619 0.00 0.00 39.29 3.33
2155 2373 3.516981 TTTGGGACACACACAAACATG 57.483 42.857 0.00 0.00 45.45 3.21
2156 2374 1.397672 TGGGACACACACAAACATGG 58.602 50.000 0.00 0.00 0.00 3.66
2157 2375 1.341482 TGGGACACACACAAACATGGT 60.341 47.619 0.00 0.00 0.00 3.55
2158 2376 1.754226 GGGACACACACAAACATGGTT 59.246 47.619 0.00 0.00 0.00 3.67
2159 2377 2.481104 GGGACACACACAAACATGGTTG 60.481 50.000 21.95 21.95 34.52 3.77
2160 2378 2.425312 GGACACACACAAACATGGTTGA 59.575 45.455 29.74 0.00 32.59 3.18
2161 2379 3.119316 GGACACACACAAACATGGTTGAA 60.119 43.478 29.74 0.00 32.59 2.69
2162 2380 3.843999 ACACACACAAACATGGTTGAAC 58.156 40.909 29.74 0.00 32.59 3.18
2163 2381 2.851235 CACACACAAACATGGTTGAACG 59.149 45.455 29.74 18.33 32.59 3.95
2164 2382 1.851666 CACACAAACATGGTTGAACGC 59.148 47.619 29.74 0.00 32.59 4.84
2165 2383 1.202359 ACACAAACATGGTTGAACGCC 60.202 47.619 29.74 0.00 32.59 5.68
2166 2384 0.387565 ACAAACATGGTTGAACGCCC 59.612 50.000 29.74 0.00 32.59 6.13
2167 2385 0.387202 CAAACATGGTTGAACGCCCA 59.613 50.000 19.04 0.00 34.66 5.36
2168 2386 1.115467 AAACATGGTTGAACGCCCAA 58.885 45.000 0.00 0.00 33.66 4.12
2169 2387 0.673437 AACATGGTTGAACGCCCAAG 59.327 50.000 0.00 0.00 33.66 3.61
2170 2388 1.178534 ACATGGTTGAACGCCCAAGG 61.179 55.000 0.00 0.00 33.66 3.61
2171 2389 2.275380 ATGGTTGAACGCCCAAGGC 61.275 57.895 0.00 0.00 46.75 4.35
2181 2399 3.302129 CCCAAGGCAATCCCAAGC 58.698 61.111 0.00 0.00 35.39 4.01
2182 2400 1.305549 CCCAAGGCAATCCCAAGCT 60.306 57.895 0.00 0.00 35.39 3.74
2183 2401 1.325476 CCCAAGGCAATCCCAAGCTC 61.325 60.000 0.00 0.00 35.39 4.09
2184 2402 1.325476 CCAAGGCAATCCCAAGCTCC 61.325 60.000 0.00 0.00 35.39 4.70
2185 2403 0.612732 CAAGGCAATCCCAAGCTCCA 60.613 55.000 0.00 0.00 35.39 3.86
2186 2404 0.324091 AAGGCAATCCCAAGCTCCAG 60.324 55.000 0.00 0.00 35.39 3.86
2187 2405 2.421399 GGCAATCCCAAGCTCCAGC 61.421 63.158 0.00 0.00 42.49 4.85
2188 2406 1.679977 GCAATCCCAAGCTCCAGCA 60.680 57.895 0.48 0.00 45.16 4.41
2189 2407 1.664321 GCAATCCCAAGCTCCAGCAG 61.664 60.000 0.48 0.00 45.16 4.24
2197 2415 4.385405 GCTCCAGCAGCGTGGACT 62.385 66.667 8.95 0.00 41.99 3.85
2198 2416 3.006756 GCTCCAGCAGCGTGGACTA 62.007 63.158 8.95 0.00 41.99 2.59
2199 2417 1.140589 CTCCAGCAGCGTGGACTAG 59.859 63.158 8.95 0.00 41.99 2.57
2200 2418 1.304134 TCCAGCAGCGTGGACTAGA 60.304 57.895 8.95 0.00 41.99 2.43
2201 2419 1.153745 CCAGCAGCGTGGACTAGAC 60.154 63.158 0.00 0.00 40.44 2.59
2202 2420 1.599606 CCAGCAGCGTGGACTAGACT 61.600 60.000 0.00 0.00 40.44 3.24
2203 2421 0.179150 CAGCAGCGTGGACTAGACTC 60.179 60.000 0.00 0.00 0.00 3.36
2204 2422 0.322997 AGCAGCGTGGACTAGACTCT 60.323 55.000 0.00 0.00 0.00 3.24
2205 2423 0.179150 GCAGCGTGGACTAGACTCTG 60.179 60.000 0.00 0.00 0.00 3.35
2206 2424 1.454201 CAGCGTGGACTAGACTCTGA 58.546 55.000 0.00 0.00 0.00 3.27
2207 2425 1.813178 CAGCGTGGACTAGACTCTGAA 59.187 52.381 0.00 0.00 0.00 3.02
2208 2426 2.229062 CAGCGTGGACTAGACTCTGAAA 59.771 50.000 0.00 0.00 0.00 2.69
2209 2427 2.891580 AGCGTGGACTAGACTCTGAAAA 59.108 45.455 0.00 0.00 0.00 2.29
2210 2428 2.987821 GCGTGGACTAGACTCTGAAAAC 59.012 50.000 0.00 0.00 0.00 2.43
2211 2429 3.305471 GCGTGGACTAGACTCTGAAAACT 60.305 47.826 0.00 0.00 0.00 2.66
2212 2430 4.082895 GCGTGGACTAGACTCTGAAAACTA 60.083 45.833 0.00 0.00 0.00 2.24
2213 2431 5.564259 GCGTGGACTAGACTCTGAAAACTAA 60.564 44.000 0.00 0.00 0.00 2.24
2214 2432 6.444633 CGTGGACTAGACTCTGAAAACTAAA 58.555 40.000 0.00 0.00 0.00 1.85
2215 2433 7.091443 CGTGGACTAGACTCTGAAAACTAAAT 58.909 38.462 0.00 0.00 0.00 1.40
2216 2434 8.242053 CGTGGACTAGACTCTGAAAACTAAATA 58.758 37.037 0.00 0.00 0.00 1.40
2223 2441 8.928270 AGACTCTGAAAACTAAATATACCACG 57.072 34.615 0.00 0.00 0.00 4.94
2224 2442 8.529476 AGACTCTGAAAACTAAATATACCACGT 58.471 33.333 0.00 0.00 0.00 4.49
2225 2443 9.793252 GACTCTGAAAACTAAATATACCACGTA 57.207 33.333 0.00 0.00 0.00 3.57
2234 2452 9.638239 AACTAAATATACCACGTAAAGTTTCGA 57.362 29.630 12.36 0.00 0.00 3.71
2235 2453 9.807649 ACTAAATATACCACGTAAAGTTTCGAT 57.192 29.630 12.36 1.69 0.00 3.59
2242 2460 6.081693 ACCACGTAAAGTTTCGATATTTTGC 58.918 36.000 12.36 4.69 0.00 3.68
2243 2461 6.072893 ACCACGTAAAGTTTCGATATTTTGCT 60.073 34.615 12.36 0.00 0.00 3.91
2244 2462 6.248420 CCACGTAAAGTTTCGATATTTTGCTG 59.752 38.462 12.36 5.87 0.00 4.41
2245 2463 6.248420 CACGTAAAGTTTCGATATTTTGCTGG 59.752 38.462 12.36 0.00 0.00 4.85
2246 2464 5.227184 CGTAAAGTTTCGATATTTTGCTGGC 59.773 40.000 6.61 0.00 0.00 4.85
2247 2465 3.405170 AGTTTCGATATTTTGCTGGCG 57.595 42.857 0.00 0.00 0.00 5.69
2248 2466 2.747446 AGTTTCGATATTTTGCTGGCGT 59.253 40.909 0.00 0.00 0.00 5.68
2249 2467 2.823196 TTCGATATTTTGCTGGCGTG 57.177 45.000 0.00 0.00 0.00 5.34
2250 2468 0.376852 TCGATATTTTGCTGGCGTGC 59.623 50.000 0.00 0.00 0.00 5.34
2251 2469 0.378257 CGATATTTTGCTGGCGTGCT 59.622 50.000 4.08 0.00 0.00 4.40
2252 2470 1.595489 CGATATTTTGCTGGCGTGCTC 60.595 52.381 4.08 0.00 0.00 4.26
2253 2471 1.672881 GATATTTTGCTGGCGTGCTCT 59.327 47.619 4.08 0.00 0.00 4.09
2254 2472 1.533625 TATTTTGCTGGCGTGCTCTT 58.466 45.000 4.08 0.00 0.00 2.85
2255 2473 0.242017 ATTTTGCTGGCGTGCTCTTC 59.758 50.000 4.08 0.00 0.00 2.87
2256 2474 1.100463 TTTTGCTGGCGTGCTCTTCA 61.100 50.000 4.08 0.00 0.00 3.02
2257 2475 0.890542 TTTGCTGGCGTGCTCTTCAT 60.891 50.000 4.08 0.00 0.00 2.57
2258 2476 1.579964 TTGCTGGCGTGCTCTTCATG 61.580 55.000 4.08 0.00 34.80 3.07
2259 2477 2.758089 GCTGGCGTGCTCTTCATGG 61.758 63.158 0.00 0.00 32.31 3.66
2260 2478 1.078918 CTGGCGTGCTCTTCATGGA 60.079 57.895 0.00 0.00 32.31 3.41
2261 2479 0.674581 CTGGCGTGCTCTTCATGGAA 60.675 55.000 0.00 0.00 32.31 3.53
2262 2480 0.035152 TGGCGTGCTCTTCATGGAAT 60.035 50.000 0.00 0.00 32.31 3.01
2263 2481 0.659957 GGCGTGCTCTTCATGGAATC 59.340 55.000 0.00 0.00 32.31 2.52
2264 2482 1.372582 GCGTGCTCTTCATGGAATCA 58.627 50.000 0.00 0.00 32.31 2.57
2265 2483 1.945394 GCGTGCTCTTCATGGAATCAT 59.055 47.619 0.00 0.00 32.31 2.45
2266 2484 2.032204 GCGTGCTCTTCATGGAATCATC 60.032 50.000 0.00 0.00 32.31 2.92
2267 2485 2.547211 CGTGCTCTTCATGGAATCATCC 59.453 50.000 0.00 0.00 46.76 3.51
2268 2486 2.883386 GTGCTCTTCATGGAATCATCCC 59.117 50.000 0.00 0.00 45.95 3.85
2269 2487 2.781757 TGCTCTTCATGGAATCATCCCT 59.218 45.455 0.00 0.00 45.95 4.20
2270 2488 3.181447 TGCTCTTCATGGAATCATCCCTC 60.181 47.826 0.00 0.00 45.95 4.30
2271 2489 3.072768 GCTCTTCATGGAATCATCCCTCT 59.927 47.826 0.00 0.00 45.95 3.69
2272 2490 4.285517 GCTCTTCATGGAATCATCCCTCTA 59.714 45.833 0.00 0.00 45.95 2.43
2273 2491 5.221803 GCTCTTCATGGAATCATCCCTCTAA 60.222 44.000 0.00 0.00 45.95 2.10
2274 2492 6.689946 GCTCTTCATGGAATCATCCCTCTAAA 60.690 42.308 0.00 0.00 45.95 1.85
2275 2493 7.211897 TCTTCATGGAATCATCCCTCTAAAA 57.788 36.000 0.00 0.00 45.95 1.52
2276 2494 7.819500 TCTTCATGGAATCATCCCTCTAAAAT 58.180 34.615 0.00 0.00 45.95 1.82
2277 2495 7.941238 TCTTCATGGAATCATCCCTCTAAAATC 59.059 37.037 0.00 0.00 45.95 2.17
2278 2496 6.546484 TCATGGAATCATCCCTCTAAAATCC 58.454 40.000 0.00 0.00 45.95 3.01
2279 2497 5.992564 TGGAATCATCCCTCTAAAATCCA 57.007 39.130 0.00 0.00 45.95 3.41
2280 2498 6.535161 TGGAATCATCCCTCTAAAATCCAT 57.465 37.500 0.00 0.00 45.95 3.41
2281 2499 7.646654 TGGAATCATCCCTCTAAAATCCATA 57.353 36.000 0.00 0.00 45.95 2.74
2282 2500 7.461749 TGGAATCATCCCTCTAAAATCCATAC 58.538 38.462 0.00 0.00 45.95 2.39
2283 2501 7.295672 TGGAATCATCCCTCTAAAATCCATACT 59.704 37.037 0.00 0.00 45.95 2.12
2284 2502 7.609532 GGAATCATCCCTCTAAAATCCATACTG 59.390 40.741 0.00 0.00 40.10 2.74
2285 2503 7.878621 ATCATCCCTCTAAAATCCATACTGA 57.121 36.000 0.00 0.00 0.00 3.41
2286 2504 7.878621 TCATCCCTCTAAAATCCATACTGAT 57.121 36.000 0.00 0.00 0.00 2.90
2287 2505 7.683578 TCATCCCTCTAAAATCCATACTGATG 58.316 38.462 0.00 0.00 0.00 3.07
2288 2506 7.513781 TCATCCCTCTAAAATCCATACTGATGA 59.486 37.037 0.00 0.00 34.73 2.92
2289 2507 7.690454 TCCCTCTAAAATCCATACTGATGAA 57.310 36.000 0.00 0.00 34.73 2.57
2290 2508 7.509546 TCCCTCTAAAATCCATACTGATGAAC 58.490 38.462 0.00 0.00 34.73 3.18
2291 2509 7.127186 TCCCTCTAAAATCCATACTGATGAACA 59.873 37.037 0.00 0.00 34.73 3.18
2301 2519 1.100510 CTGATGAACAGGCATGTGGG 58.899 55.000 4.03 0.00 40.39 4.61
2302 2520 0.697658 TGATGAACAGGCATGTGGGA 59.302 50.000 4.03 0.00 40.39 4.37
2303 2521 1.285667 TGATGAACAGGCATGTGGGAT 59.714 47.619 4.03 0.00 40.39 3.85
2304 2522 1.952296 GATGAACAGGCATGTGGGATC 59.048 52.381 4.03 3.34 40.39 3.36
2305 2523 0.392863 TGAACAGGCATGTGGGATCG 60.393 55.000 4.03 0.00 40.39 3.69
2306 2524 1.077501 AACAGGCATGTGGGATCGG 60.078 57.895 4.03 0.00 40.39 4.18
2307 2525 1.561769 AACAGGCATGTGGGATCGGA 61.562 55.000 4.03 0.00 40.39 4.55
2308 2526 1.348008 ACAGGCATGTGGGATCGGAT 61.348 55.000 1.71 0.00 38.57 4.18
2309 2527 0.887836 CAGGCATGTGGGATCGGATG 60.888 60.000 0.00 0.00 0.00 3.51
2310 2528 1.601759 GGCATGTGGGATCGGATGG 60.602 63.158 0.00 0.00 0.00 3.51
2311 2529 1.149174 GCATGTGGGATCGGATGGT 59.851 57.895 0.00 0.00 0.00 3.55
2312 2530 0.886490 GCATGTGGGATCGGATGGTC 60.886 60.000 0.00 0.00 0.00 4.02
2313 2531 0.761187 CATGTGGGATCGGATGGTCT 59.239 55.000 0.00 0.00 0.00 3.85
2314 2532 1.141657 CATGTGGGATCGGATGGTCTT 59.858 52.381 0.00 0.00 0.00 3.01
2315 2533 0.541392 TGTGGGATCGGATGGTCTTG 59.459 55.000 0.00 0.00 0.00 3.02
2316 2534 0.541863 GTGGGATCGGATGGTCTTGT 59.458 55.000 0.00 0.00 0.00 3.16
2317 2535 0.830648 TGGGATCGGATGGTCTTGTC 59.169 55.000 0.00 0.00 0.00 3.18
2318 2536 0.106894 GGGATCGGATGGTCTTGTCC 59.893 60.000 0.00 0.00 0.00 4.02
2325 2543 2.711542 GGATGGTCTTGTCCGATTTGT 58.288 47.619 0.00 0.00 0.00 2.83
2326 2544 2.678336 GGATGGTCTTGTCCGATTTGTC 59.322 50.000 0.00 0.00 0.00 3.18
2327 2545 2.920724 TGGTCTTGTCCGATTTGTCA 57.079 45.000 0.00 0.00 0.00 3.58
2328 2546 3.417069 TGGTCTTGTCCGATTTGTCAT 57.583 42.857 0.00 0.00 0.00 3.06
2329 2547 3.073678 TGGTCTTGTCCGATTTGTCATG 58.926 45.455 0.00 0.00 0.00 3.07
2330 2548 2.420022 GGTCTTGTCCGATTTGTCATGG 59.580 50.000 0.00 0.00 0.00 3.66
2331 2549 3.334691 GTCTTGTCCGATTTGTCATGGA 58.665 45.455 0.00 0.00 0.00 3.41
2332 2550 3.372206 GTCTTGTCCGATTTGTCATGGAG 59.628 47.826 0.00 0.00 0.00 3.86
2333 2551 1.737838 TGTCCGATTTGTCATGGAGC 58.262 50.000 0.00 0.00 0.00 4.70
2334 2552 1.278985 TGTCCGATTTGTCATGGAGCT 59.721 47.619 0.00 0.00 0.00 4.09
2335 2553 1.667724 GTCCGATTTGTCATGGAGCTG 59.332 52.381 0.00 0.00 0.00 4.24
2336 2554 0.379669 CCGATTTGTCATGGAGCTGC 59.620 55.000 0.00 0.00 0.00 5.25
2337 2555 1.376543 CGATTTGTCATGGAGCTGCT 58.623 50.000 6.82 0.00 0.00 4.24
2338 2556 1.063616 CGATTTGTCATGGAGCTGCTG 59.936 52.381 7.01 2.52 0.00 4.41
2339 2557 2.362736 GATTTGTCATGGAGCTGCTGA 58.637 47.619 7.01 5.05 0.00 4.26
2340 2558 1.817357 TTTGTCATGGAGCTGCTGAG 58.183 50.000 7.01 0.00 0.00 3.35
2341 2559 0.035725 TTGTCATGGAGCTGCTGAGG 60.036 55.000 7.01 0.00 0.00 3.86
2342 2560 0.906282 TGTCATGGAGCTGCTGAGGA 60.906 55.000 7.01 0.00 0.00 3.71
2343 2561 0.469070 GTCATGGAGCTGCTGAGGAT 59.531 55.000 7.01 0.00 0.00 3.24
2344 2562 1.690893 GTCATGGAGCTGCTGAGGATA 59.309 52.381 7.01 0.00 0.00 2.59
2345 2563 2.302445 GTCATGGAGCTGCTGAGGATAT 59.698 50.000 7.01 0.00 0.00 1.63
2346 2564 3.513119 GTCATGGAGCTGCTGAGGATATA 59.487 47.826 7.01 0.00 0.00 0.86
2347 2565 4.020751 GTCATGGAGCTGCTGAGGATATAA 60.021 45.833 7.01 0.00 0.00 0.98
2348 2566 4.594491 TCATGGAGCTGCTGAGGATATAAA 59.406 41.667 7.01 0.00 0.00 1.40
2349 2567 5.072193 TCATGGAGCTGCTGAGGATATAAAA 59.928 40.000 7.01 0.00 0.00 1.52
2350 2568 5.573380 TGGAGCTGCTGAGGATATAAAAT 57.427 39.130 7.01 0.00 0.00 1.82
2351 2569 6.686484 TGGAGCTGCTGAGGATATAAAATA 57.314 37.500 7.01 0.00 0.00 1.40
2352 2570 7.262990 TGGAGCTGCTGAGGATATAAAATAT 57.737 36.000 7.01 0.00 0.00 1.28
2353 2571 7.334090 TGGAGCTGCTGAGGATATAAAATATC 58.666 38.462 7.01 0.00 0.00 1.63
2354 2572 7.181665 TGGAGCTGCTGAGGATATAAAATATCT 59.818 37.037 7.01 0.00 0.00 1.98
2355 2573 8.046107 GGAGCTGCTGAGGATATAAAATATCTT 58.954 37.037 7.01 0.05 0.00 2.40
2356 2574 9.097257 GAGCTGCTGAGGATATAAAATATCTTC 57.903 37.037 7.01 10.50 32.64 2.87
2357 2575 8.824783 AGCTGCTGAGGATATAAAATATCTTCT 58.175 33.333 15.72 4.02 33.05 2.85
2358 2576 9.447157 GCTGCTGAGGATATAAAATATCTTCTT 57.553 33.333 15.72 0.00 33.05 2.52
2374 2592 8.970691 ATATCTTCTTTTTGAATGTTTCACCG 57.029 30.769 0.00 0.00 39.87 4.94
2375 2593 5.040635 TCTTCTTTTTGAATGTTTCACCGC 58.959 37.500 0.00 0.00 39.87 5.68
2376 2594 3.712187 TCTTTTTGAATGTTTCACCGCC 58.288 40.909 0.00 0.00 39.87 6.13
2377 2595 3.131223 TCTTTTTGAATGTTTCACCGCCA 59.869 39.130 0.00 0.00 39.87 5.69
2378 2596 2.791383 TTTGAATGTTTCACCGCCAG 57.209 45.000 0.00 0.00 39.87 4.85
2379 2597 1.974265 TTGAATGTTTCACCGCCAGA 58.026 45.000 0.00 0.00 39.87 3.86
2380 2598 1.522668 TGAATGTTTCACCGCCAGAG 58.477 50.000 0.00 0.00 34.08 3.35
2381 2599 1.071542 TGAATGTTTCACCGCCAGAGA 59.928 47.619 0.00 0.00 34.08 3.10
2382 2600 2.151202 GAATGTTTCACCGCCAGAGAA 58.849 47.619 0.00 0.00 0.00 2.87
2383 2601 1.523758 ATGTTTCACCGCCAGAGAAC 58.476 50.000 0.00 0.00 0.00 3.01
2384 2602 0.468226 TGTTTCACCGCCAGAGAACT 59.532 50.000 0.00 0.00 0.00 3.01
2385 2603 1.134220 TGTTTCACCGCCAGAGAACTT 60.134 47.619 0.00 0.00 0.00 2.66
2386 2604 1.947456 GTTTCACCGCCAGAGAACTTT 59.053 47.619 0.00 0.00 0.00 2.66
2387 2605 1.593196 TTCACCGCCAGAGAACTTTG 58.407 50.000 0.00 0.00 0.00 2.77
2388 2606 0.250295 TCACCGCCAGAGAACTTTGG 60.250 55.000 6.97 6.97 37.53 3.28
2389 2607 0.250295 CACCGCCAGAGAACTTTGGA 60.250 55.000 14.27 0.00 36.55 3.53
2390 2608 0.035458 ACCGCCAGAGAACTTTGGAG 59.965 55.000 14.27 10.95 36.55 3.86
2391 2609 0.321671 CCGCCAGAGAACTTTGGAGA 59.678 55.000 14.27 0.00 36.50 3.71
2392 2610 1.674221 CCGCCAGAGAACTTTGGAGAG 60.674 57.143 14.27 5.60 36.50 3.20
2393 2611 1.674221 CGCCAGAGAACTTTGGAGAGG 60.674 57.143 14.27 0.00 36.50 3.69
2394 2612 1.948144 GCCAGAGAACTTTGGAGAGGC 60.948 57.143 14.27 0.00 36.55 4.70
2395 2613 1.339535 CCAGAGAACTTTGGAGAGGCC 60.340 57.143 5.60 0.00 36.55 5.19
2396 2614 1.627834 CAGAGAACTTTGGAGAGGCCT 59.372 52.381 3.86 3.86 37.63 5.19
2397 2615 1.627834 AGAGAACTTTGGAGAGGCCTG 59.372 52.381 12.00 0.00 37.63 4.85
2398 2616 0.695347 AGAACTTTGGAGAGGCCTGG 59.305 55.000 12.00 0.00 37.63 4.45
2399 2617 0.322906 GAACTTTGGAGAGGCCTGGG 60.323 60.000 12.00 0.00 37.63 4.45
2400 2618 2.044551 CTTTGGAGAGGCCTGGGC 60.045 66.667 12.00 13.15 37.63 5.36
2401 2619 2.858476 TTTGGAGAGGCCTGGGCA 60.858 61.111 23.25 0.00 44.11 5.36
2402 2620 2.220786 CTTTGGAGAGGCCTGGGCAT 62.221 60.000 23.25 10.47 44.11 4.40
2403 2621 0.918799 TTTGGAGAGGCCTGGGCATA 60.919 55.000 23.25 0.50 44.11 3.14
2404 2622 0.698886 TTGGAGAGGCCTGGGCATAT 60.699 55.000 23.25 4.78 44.11 1.78
2405 2623 0.698886 TGGAGAGGCCTGGGCATATT 60.699 55.000 23.25 0.42 44.11 1.28
2406 2624 0.251077 GGAGAGGCCTGGGCATATTG 60.251 60.000 23.25 0.00 44.11 1.90
2407 2625 0.251077 GAGAGGCCTGGGCATATTGG 60.251 60.000 23.25 0.00 44.11 3.16
2408 2626 0.698886 AGAGGCCTGGGCATATTGGA 60.699 55.000 23.25 0.00 44.11 3.53
2409 2627 0.185901 GAGGCCTGGGCATATTGGAA 59.814 55.000 23.25 0.00 44.11 3.53
2410 2628 0.636101 AGGCCTGGGCATATTGGAAA 59.364 50.000 23.25 0.00 44.11 3.13
2411 2629 1.221265 AGGCCTGGGCATATTGGAAAT 59.779 47.619 23.25 0.00 44.11 2.17
2412 2630 2.049372 GGCCTGGGCATATTGGAAATT 58.951 47.619 16.34 0.00 44.11 1.82
2413 2631 3.116784 AGGCCTGGGCATATTGGAAATTA 60.117 43.478 23.25 0.00 44.11 1.40
2414 2632 3.840078 GGCCTGGGCATATTGGAAATTAT 59.160 43.478 16.34 0.00 44.11 1.28
2415 2633 4.286808 GGCCTGGGCATATTGGAAATTATT 59.713 41.667 16.34 0.00 44.11 1.40
2416 2634 5.240121 GCCTGGGCATATTGGAAATTATTG 58.760 41.667 6.75 0.00 41.49 1.90
2417 2635 5.011943 GCCTGGGCATATTGGAAATTATTGA 59.988 40.000 6.75 0.00 41.49 2.57
2418 2636 6.458210 CCTGGGCATATTGGAAATTATTGAC 58.542 40.000 0.00 0.00 0.00 3.18
2419 2637 6.083098 TGGGCATATTGGAAATTATTGACG 57.917 37.500 0.00 0.00 0.00 4.35
2420 2638 5.010516 TGGGCATATTGGAAATTATTGACGG 59.989 40.000 0.00 0.00 0.00 4.79
2421 2639 5.242838 GGGCATATTGGAAATTATTGACGGA 59.757 40.000 0.00 0.00 0.00 4.69
2422 2640 6.381801 GGCATATTGGAAATTATTGACGGAG 58.618 40.000 0.00 0.00 0.00 4.63
2423 2641 5.858581 GCATATTGGAAATTATTGACGGAGC 59.141 40.000 0.00 0.00 0.00 4.70
2424 2642 6.294176 GCATATTGGAAATTATTGACGGAGCT 60.294 38.462 0.00 0.00 0.00 4.09
2425 2643 4.963276 TTGGAAATTATTGACGGAGCTG 57.037 40.909 0.00 0.00 0.00 4.24
2426 2644 2.682856 TGGAAATTATTGACGGAGCTGC 59.317 45.455 0.00 0.00 0.00 5.25
2427 2645 2.682856 GGAAATTATTGACGGAGCTGCA 59.317 45.455 5.91 0.00 0.00 4.41
2428 2646 3.128589 GGAAATTATTGACGGAGCTGCAA 59.871 43.478 5.91 0.00 0.00 4.08
2429 2647 3.764885 AATTATTGACGGAGCTGCAAC 57.235 42.857 5.91 0.00 0.00 4.17
2430 2648 1.075542 TTATTGACGGAGCTGCAACG 58.924 50.000 5.91 13.15 0.00 4.10
2431 2649 0.739462 TATTGACGGAGCTGCAACGG 60.739 55.000 17.69 10.67 0.00 4.44
2432 2650 2.731691 ATTGACGGAGCTGCAACGGT 62.732 55.000 17.69 13.29 0.00 4.83
2433 2651 3.414700 GACGGAGCTGCAACGGTG 61.415 66.667 17.69 0.00 0.00 4.94
2434 2652 4.988598 ACGGAGCTGCAACGGTGG 62.989 66.667 17.69 0.00 0.00 4.61
2435 2653 4.680237 CGGAGCTGCAACGGTGGA 62.680 66.667 5.91 0.00 0.00 4.02
2436 2654 2.045926 GGAGCTGCAACGGTGGAT 60.046 61.111 0.90 0.00 0.00 3.41
2437 2655 2.109126 GGAGCTGCAACGGTGGATC 61.109 63.158 0.90 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.751259 ACCATGTACGTGTACGAGTGAT 59.249 45.455 13.91 0.00 43.02 3.06
2 3 2.624316 ACCATGTACGTGTACGAGTG 57.376 50.000 13.91 4.24 43.02 3.51
4 5 1.652124 GCAACCATGTACGTGTACGAG 59.348 52.381 13.91 0.92 43.02 4.18
5 6 1.270274 AGCAACCATGTACGTGTACGA 59.730 47.619 13.91 0.00 43.02 3.43
6 7 1.705256 AGCAACCATGTACGTGTACG 58.295 50.000 13.91 2.43 46.33 3.67
7 8 2.803956 ACAAGCAACCATGTACGTGTAC 59.196 45.455 13.91 3.21 36.63 2.90
8 9 3.061322 GACAAGCAACCATGTACGTGTA 58.939 45.455 13.91 0.00 0.00 2.90
9 10 1.871039 GACAAGCAACCATGTACGTGT 59.129 47.619 13.91 0.00 0.00 4.49
10 11 1.136363 CGACAAGCAACCATGTACGTG 60.136 52.381 8.18 8.18 0.00 4.49
11 12 1.144969 CGACAAGCAACCATGTACGT 58.855 50.000 0.00 0.00 0.00 3.57
12 13 1.144969 ACGACAAGCAACCATGTACG 58.855 50.000 0.00 0.00 0.00 3.67
13 14 3.930229 TGATACGACAAGCAACCATGTAC 59.070 43.478 0.00 0.00 0.00 2.90
14 15 4.195225 TGATACGACAAGCAACCATGTA 57.805 40.909 0.00 0.00 0.00 2.29
15 16 3.052455 TGATACGACAAGCAACCATGT 57.948 42.857 0.00 0.00 0.00 3.21
16 17 4.418013 TTTGATACGACAAGCAACCATG 57.582 40.909 0.00 0.00 0.00 3.66
17 18 4.699735 TGATTTGATACGACAAGCAACCAT 59.300 37.500 0.00 0.00 0.00 3.55
18 19 4.068599 TGATTTGATACGACAAGCAACCA 58.931 39.130 0.00 0.00 0.00 3.67
19 20 4.678509 TGATTTGATACGACAAGCAACC 57.321 40.909 0.00 0.00 0.00 3.77
20 21 5.030295 CCATGATTTGATACGACAAGCAAC 58.970 41.667 0.00 0.00 0.00 4.17
21 22 4.438608 GCCATGATTTGATACGACAAGCAA 60.439 41.667 0.00 0.00 0.00 3.91
22 23 3.065233 GCCATGATTTGATACGACAAGCA 59.935 43.478 0.00 0.00 0.00 3.91
23 24 3.621794 GCCATGATTTGATACGACAAGC 58.378 45.455 0.00 0.00 0.00 4.01
24 25 3.309682 ACGCCATGATTTGATACGACAAG 59.690 43.478 0.00 0.00 0.00 3.16
25 26 3.266636 ACGCCATGATTTGATACGACAA 58.733 40.909 0.00 0.00 0.00 3.18
26 27 2.899976 ACGCCATGATTTGATACGACA 58.100 42.857 0.00 0.00 0.00 4.35
27 28 5.591643 AATACGCCATGATTTGATACGAC 57.408 39.130 0.00 0.00 0.00 4.34
28 29 6.258947 TCAAAATACGCCATGATTTGATACGA 59.741 34.615 0.00 0.00 35.67 3.43
29 30 6.426327 TCAAAATACGCCATGATTTGATACG 58.574 36.000 0.00 0.00 35.67 3.06
30 31 8.128582 TCTTCAAAATACGCCATGATTTGATAC 58.871 33.333 0.00 0.00 39.10 2.24
31 32 8.219546 TCTTCAAAATACGCCATGATTTGATA 57.780 30.769 0.00 0.00 39.10 2.15
32 33 7.099266 TCTTCAAAATACGCCATGATTTGAT 57.901 32.000 0.00 0.00 39.10 2.57
33 34 6.507958 TCTTCAAAATACGCCATGATTTGA 57.492 33.333 0.00 0.00 38.00 2.69
34 35 7.760131 AATCTTCAAAATACGCCATGATTTG 57.240 32.000 0.00 0.00 33.43 2.32
35 36 9.683069 GATAATCTTCAAAATACGCCATGATTT 57.317 29.630 0.00 0.00 0.00 2.17
36 37 8.017373 CGATAATCTTCAAAATACGCCATGATT 58.983 33.333 0.00 0.00 0.00 2.57
37 38 7.173218 ACGATAATCTTCAAAATACGCCATGAT 59.827 33.333 0.00 0.00 0.00 2.45
38 39 6.481976 ACGATAATCTTCAAAATACGCCATGA 59.518 34.615 0.00 0.00 0.00 3.07
39 40 6.658831 ACGATAATCTTCAAAATACGCCATG 58.341 36.000 0.00 0.00 0.00 3.66
40 41 6.861065 ACGATAATCTTCAAAATACGCCAT 57.139 33.333 0.00 0.00 0.00 4.40
41 42 6.982141 ACTACGATAATCTTCAAAATACGCCA 59.018 34.615 0.00 0.00 0.00 5.69
42 43 7.404139 ACTACGATAATCTTCAAAATACGCC 57.596 36.000 0.00 0.00 0.00 5.68
43 44 9.354544 GAAACTACGATAATCTTCAAAATACGC 57.645 33.333 0.00 0.00 0.00 4.42
44 45 9.845305 GGAAACTACGATAATCTTCAAAATACG 57.155 33.333 0.00 0.00 0.00 3.06
49 50 9.280174 ACAAAGGAAACTACGATAATCTTCAAA 57.720 29.630 0.00 0.00 42.68 2.69
50 51 8.717821 CACAAAGGAAACTACGATAATCTTCAA 58.282 33.333 0.00 0.00 42.68 2.69
51 52 7.148474 GCACAAAGGAAACTACGATAATCTTCA 60.148 37.037 0.00 0.00 42.68 3.02
52 53 7.180748 GCACAAAGGAAACTACGATAATCTTC 58.819 38.462 0.00 0.00 42.68 2.87
53 54 6.183360 CGCACAAAGGAAACTACGATAATCTT 60.183 38.462 0.00 0.00 42.68 2.40
54 55 5.291128 CGCACAAAGGAAACTACGATAATCT 59.709 40.000 0.00 0.00 42.68 2.40
55 56 5.490213 CGCACAAAGGAAACTACGATAATC 58.510 41.667 0.00 0.00 42.68 1.75
56 57 4.331717 CCGCACAAAGGAAACTACGATAAT 59.668 41.667 0.00 0.00 42.68 1.28
57 58 3.680937 CCGCACAAAGGAAACTACGATAA 59.319 43.478 0.00 0.00 42.68 1.75
58 59 3.255725 CCGCACAAAGGAAACTACGATA 58.744 45.455 0.00 0.00 42.68 2.92
59 60 2.073816 CCGCACAAAGGAAACTACGAT 58.926 47.619 0.00 0.00 42.68 3.73
60 61 1.504359 CCGCACAAAGGAAACTACGA 58.496 50.000 0.00 0.00 42.68 3.43
61 62 0.110373 GCCGCACAAAGGAAACTACG 60.110 55.000 0.00 0.00 42.68 3.51
62 63 1.069227 CAGCCGCACAAAGGAAACTAC 60.069 52.381 0.00 0.00 42.68 2.73
63 64 1.234821 CAGCCGCACAAAGGAAACTA 58.765 50.000 0.00 0.00 42.68 2.24
65 66 0.948678 TACAGCCGCACAAAGGAAAC 59.051 50.000 0.00 0.00 0.00 2.78
66 67 1.234821 CTACAGCCGCACAAAGGAAA 58.765 50.000 0.00 0.00 0.00 3.13
67 68 0.107831 ACTACAGCCGCACAAAGGAA 59.892 50.000 0.00 0.00 0.00 3.36
68 69 0.320421 GACTACAGCCGCACAAAGGA 60.320 55.000 0.00 0.00 0.00 3.36
69 70 0.602638 TGACTACAGCCGCACAAAGG 60.603 55.000 0.00 0.00 0.00 3.11
70 71 1.442769 ATGACTACAGCCGCACAAAG 58.557 50.000 0.00 0.00 0.00 2.77
71 72 1.535028 CAATGACTACAGCCGCACAAA 59.465 47.619 0.00 0.00 0.00 2.83
72 73 1.155889 CAATGACTACAGCCGCACAA 58.844 50.000 0.00 0.00 0.00 3.33
73 74 0.034756 ACAATGACTACAGCCGCACA 59.965 50.000 0.00 0.00 0.00 4.57
74 75 0.443869 CACAATGACTACAGCCGCAC 59.556 55.000 0.00 0.00 0.00 5.34
75 76 0.320050 TCACAATGACTACAGCCGCA 59.680 50.000 0.00 0.00 0.00 5.69
76 77 1.328680 CATCACAATGACTACAGCCGC 59.671 52.381 0.00 0.00 34.61 6.53
77 78 1.328680 GCATCACAATGACTACAGCCG 59.671 52.381 0.00 0.00 34.61 5.52
78 79 1.672881 GGCATCACAATGACTACAGCC 59.327 52.381 0.00 0.00 37.97 4.85
79 80 1.328680 CGGCATCACAATGACTACAGC 59.671 52.381 0.00 0.00 38.93 4.40
80 81 1.935873 CCGGCATCACAATGACTACAG 59.064 52.381 0.00 0.00 38.93 2.74
81 82 1.406751 CCCGGCATCACAATGACTACA 60.407 52.381 0.00 0.00 38.93 2.74
82 83 1.299541 CCCGGCATCACAATGACTAC 58.700 55.000 0.00 0.00 38.93 2.73
83 84 0.463654 GCCCGGCATCACAATGACTA 60.464 55.000 3.91 0.00 38.93 2.59
84 85 1.750399 GCCCGGCATCACAATGACT 60.750 57.895 3.91 0.00 38.93 3.41
85 86 1.594194 TTGCCCGGCATCACAATGAC 61.594 55.000 14.30 0.00 38.76 3.06
100 101 2.333926 GGCACGAAAAACCTAATTGCC 58.666 47.619 0.00 0.00 41.19 4.52
119 120 0.960364 ATGGCCAAAGTACAGCACGG 60.960 55.000 10.96 0.00 0.00 4.94
125 126 5.722263 CAATGAATGAATGGCCAAAGTACA 58.278 37.500 10.96 6.95 0.00 2.90
130 131 3.985019 AGCAATGAATGAATGGCCAAA 57.015 38.095 10.96 0.00 0.00 3.28
150 151 1.079474 TTCAGCGACGGCAGCATTA 60.079 52.632 7.79 0.00 43.41 1.90
161 162 3.046087 GCTGCACTGCTTCAGCGA 61.046 61.111 1.98 0.00 44.94 4.93
169 170 1.367659 CTTCTCCTTAGCTGCACTGC 58.632 55.000 1.02 0.00 0.00 4.40
180 204 2.498078 CTCCTACCTTTCGCTTCTCCTT 59.502 50.000 0.00 0.00 0.00 3.36
190 214 0.620700 TCAGGGCCCTCCTACCTTTC 60.621 60.000 25.77 0.00 46.12 2.62
202 226 2.285442 AGTACCAGGGTCAGGGCC 60.285 66.667 0.00 0.00 0.00 5.80
239 271 1.062880 CCGGCGCTCGCTTTTTATTTA 59.937 47.619 7.64 0.00 41.60 1.40
277 309 2.254350 CGGCGTCTCTGTCGACAA 59.746 61.111 20.49 9.70 39.90 3.18
389 427 0.947244 GACTGTGCTTTGTGGGACTG 59.053 55.000 0.00 0.00 34.02 3.51
390 428 0.179018 GGACTGTGCTTTGTGGGACT 60.179 55.000 0.00 0.00 0.00 3.85
391 429 1.172812 GGGACTGTGCTTTGTGGGAC 61.173 60.000 0.00 0.00 0.00 4.46
392 430 1.150536 GGGACTGTGCTTTGTGGGA 59.849 57.895 0.00 0.00 0.00 4.37
393 431 0.754957 TTGGGACTGTGCTTTGTGGG 60.755 55.000 0.00 0.00 0.00 4.61
394 432 1.110442 TTTGGGACTGTGCTTTGTGG 58.890 50.000 0.00 0.00 0.00 4.17
395 433 2.957491 TTTTGGGACTGTGCTTTGTG 57.043 45.000 0.00 0.00 0.00 3.33
396 434 5.564651 CGATTATTTTGGGACTGTGCTTTGT 60.565 40.000 0.00 0.00 0.00 2.83
399 437 4.331968 TCGATTATTTTGGGACTGTGCTT 58.668 39.130 0.00 0.00 0.00 3.91
412 450 7.095774 GGTGTACACATTAGCGATCGATTATTT 60.096 37.037 26.51 1.56 0.00 1.40
468 512 3.118629 TGCTAATCAGTCAGCCACTAAGG 60.119 47.826 0.00 0.00 36.95 2.69
561 623 1.154150 GGCAAAGCATCACACTCGC 60.154 57.895 0.00 0.00 0.00 5.03
574 636 2.909965 GGGACCGCTGTTGGCAAA 60.910 61.111 0.00 0.00 41.91 3.68
586 648 1.297689 GGTTAAGTGGGACGGGACC 59.702 63.158 0.00 0.00 0.00 4.46
591 653 2.671396 CGAAAGATGGTTAAGTGGGACG 59.329 50.000 0.00 0.00 0.00 4.79
680 770 9.698309 GAGTCATTTCATCGATTAGGATCTTAA 57.302 33.333 0.00 0.00 0.00 1.85
729 819 5.776744 ACAAATCAAAAGGAAGCTAAGCTG 58.223 37.500 0.00 0.00 39.62 4.24
781 871 1.727335 GTTTCCTCTCTCTTTTCGCCG 59.273 52.381 0.00 0.00 0.00 6.46
831 921 3.632604 TGTCTTGCTACCTCGGATCTAAG 59.367 47.826 0.00 0.00 0.00 2.18
835 925 1.067821 CCTGTCTTGCTACCTCGGATC 59.932 57.143 0.00 0.00 0.00 3.36
849 939 3.831911 CCTCTCTCTCAAGAAACCTGTCT 59.168 47.826 0.00 0.00 0.00 3.41
850 940 3.056179 CCCTCTCTCTCAAGAAACCTGTC 60.056 52.174 0.00 0.00 0.00 3.51
851 941 2.903135 CCCTCTCTCTCAAGAAACCTGT 59.097 50.000 0.00 0.00 0.00 4.00
852 942 3.169099 TCCCTCTCTCTCAAGAAACCTG 58.831 50.000 0.00 0.00 0.00 4.00
854 944 3.436243 TCTCCCTCTCTCTCAAGAAACC 58.564 50.000 0.00 0.00 0.00 3.27
951 1044 3.723348 GGCTCGTGGGTTTCGTGC 61.723 66.667 0.00 0.00 43.70 5.34
970 1063 1.302832 CGCTGCTTTCCCTTGTCCT 60.303 57.895 0.00 0.00 0.00 3.85
978 1071 3.361977 TTTCGGCCGCTGCTTTCC 61.362 61.111 23.51 0.00 37.74 3.13
979 1072 2.126850 GTTTCGGCCGCTGCTTTC 60.127 61.111 23.51 2.34 37.74 2.62
1510 1615 2.505498 CGGACAGATCGAAACGGCG 61.505 63.158 4.80 4.80 0.00 6.46
1526 1634 1.316706 ACGAGAAAGAGAGAGGCCGG 61.317 60.000 0.00 0.00 0.00 6.13
1539 1647 5.825679 TCATCAAAAGGAAAGGAAACGAGAA 59.174 36.000 0.00 0.00 0.00 2.87
1544 1652 6.803807 CGAGAATCATCAAAAGGAAAGGAAAC 59.196 38.462 0.00 0.00 33.17 2.78
1547 1655 4.396166 GCGAGAATCATCAAAAGGAAAGGA 59.604 41.667 0.00 0.00 33.17 3.36
1548 1656 4.439289 GGCGAGAATCATCAAAAGGAAAGG 60.439 45.833 0.00 0.00 33.17 3.11
1551 1659 2.677836 CGGCGAGAATCATCAAAAGGAA 59.322 45.455 0.00 0.00 33.17 3.36
1554 1662 2.285256 CGACGGCGAGAATCATCAAAAG 60.285 50.000 16.62 0.00 40.82 2.27
1555 1663 1.658596 CGACGGCGAGAATCATCAAAA 59.341 47.619 16.62 0.00 40.82 2.44
1557 1665 0.527600 CCGACGGCGAGAATCATCAA 60.528 55.000 15.16 0.00 40.82 2.57
1559 1667 0.527817 AACCGACGGCGAGAATCATC 60.528 55.000 15.16 0.00 40.82 2.92
1560 1668 0.527817 GAACCGACGGCGAGAATCAT 60.528 55.000 15.16 0.00 40.82 2.45
1561 1669 1.153901 GAACCGACGGCGAGAATCA 60.154 57.895 15.16 0.00 40.82 2.57
1562 1670 2.222217 CGAACCGACGGCGAGAATC 61.222 63.158 15.16 3.22 40.82 2.52
1594 1728 3.310774 CGAAATTTCTGGCTGATCATCGT 59.689 43.478 15.92 0.00 0.00 3.73
1724 1934 2.044492 ACAGTGATGGGAGAGGTAAGGA 59.956 50.000 0.00 0.00 0.00 3.36
1725 1935 2.432510 GACAGTGATGGGAGAGGTAAGG 59.567 54.545 0.00 0.00 0.00 2.69
1747 1957 3.497942 CCACTACCAGTGTTTTTAGGGCT 60.498 47.826 5.65 0.00 44.50 5.19
1776 1986 6.238593 GCTTTCCATGAGATAAATCCTGTGAC 60.239 42.308 0.00 0.00 0.00 3.67
1848 2058 3.057315 ACTGCAACGGATCATTTTTCCTG 60.057 43.478 0.00 0.00 0.00 3.86
1931 2143 2.789409 AATTACAGTGGCCTCTCACC 57.211 50.000 3.81 0.00 38.34 4.02
2005 2223 3.053693 TGGGGATAGCAGCACAAAGTTAT 60.054 43.478 0.00 0.00 0.00 1.89
2020 2238 0.263468 TCATCGTCCAGGTGGGGATA 59.737 55.000 0.00 0.00 39.62 2.59
2117 2335 0.598065 AAAGTGCGGCTGTTGATTCC 59.402 50.000 0.00 0.00 0.00 3.01
2123 2341 1.454847 TCCCAAAAGTGCGGCTGTT 60.455 52.632 0.00 0.00 0.00 3.16
2130 2348 0.814457 TGTGTGTGTCCCAAAAGTGC 59.186 50.000 0.00 0.00 0.00 4.40
2131 2349 3.249917 GTTTGTGTGTGTCCCAAAAGTG 58.750 45.455 0.00 0.00 30.57 3.16
2132 2350 2.894126 TGTTTGTGTGTGTCCCAAAAGT 59.106 40.909 0.00 0.00 30.57 2.66
2133 2351 3.584406 TGTTTGTGTGTGTCCCAAAAG 57.416 42.857 0.00 0.00 30.57 2.27
2134 2352 3.368843 CCATGTTTGTGTGTGTCCCAAAA 60.369 43.478 0.00 0.00 30.57 2.44
2135 2353 2.167281 CCATGTTTGTGTGTGTCCCAAA 59.833 45.455 0.00 0.00 0.00 3.28
2136 2354 1.753649 CCATGTTTGTGTGTGTCCCAA 59.246 47.619 0.00 0.00 0.00 4.12
2137 2355 1.341482 ACCATGTTTGTGTGTGTCCCA 60.341 47.619 0.00 0.00 0.00 4.37
2138 2356 1.398692 ACCATGTTTGTGTGTGTCCC 58.601 50.000 0.00 0.00 0.00 4.46
2139 2357 2.425312 TCAACCATGTTTGTGTGTGTCC 59.575 45.455 2.68 0.00 0.00 4.02
2140 2358 3.773860 TCAACCATGTTTGTGTGTGTC 57.226 42.857 2.68 0.00 0.00 3.67
2141 2359 3.671971 CGTTCAACCATGTTTGTGTGTGT 60.672 43.478 2.68 0.00 0.00 3.72
2142 2360 2.851235 CGTTCAACCATGTTTGTGTGTG 59.149 45.455 2.68 0.00 0.00 3.82
2143 2361 2.733858 GCGTTCAACCATGTTTGTGTGT 60.734 45.455 2.68 0.00 0.00 3.72
2144 2362 1.851666 GCGTTCAACCATGTTTGTGTG 59.148 47.619 2.68 0.00 0.00 3.82
2145 2363 1.202359 GGCGTTCAACCATGTTTGTGT 60.202 47.619 2.68 0.00 0.00 3.72
2146 2364 1.486439 GGCGTTCAACCATGTTTGTG 58.514 50.000 2.68 0.00 0.00 3.33
2147 2365 0.387565 GGGCGTTCAACCATGTTTGT 59.612 50.000 2.68 0.00 0.00 2.83
2148 2366 0.387202 TGGGCGTTCAACCATGTTTG 59.613 50.000 0.00 0.00 0.00 2.93
2149 2367 1.068434 CTTGGGCGTTCAACCATGTTT 59.932 47.619 0.00 0.00 36.48 2.83
2150 2368 0.673437 CTTGGGCGTTCAACCATGTT 59.327 50.000 0.00 0.00 36.48 2.71
2151 2369 1.178534 CCTTGGGCGTTCAACCATGT 61.179 55.000 0.00 0.00 36.48 3.21
2152 2370 1.586028 CCTTGGGCGTTCAACCATG 59.414 57.895 0.00 0.00 36.48 3.66
2153 2371 2.275380 GCCTTGGGCGTTCAACCAT 61.275 57.895 0.00 0.00 39.62 3.55
2154 2372 2.909965 GCCTTGGGCGTTCAACCA 60.910 61.111 0.00 0.00 39.62 3.67
2164 2382 1.305549 AGCTTGGGATTGCCTTGGG 60.306 57.895 0.00 0.00 0.00 4.12
2165 2383 1.325476 GGAGCTTGGGATTGCCTTGG 61.325 60.000 0.00 0.00 0.00 3.61
2166 2384 0.612732 TGGAGCTTGGGATTGCCTTG 60.613 55.000 0.00 0.00 0.00 3.61
2167 2385 0.324091 CTGGAGCTTGGGATTGCCTT 60.324 55.000 0.00 0.00 0.00 4.35
2168 2386 1.305623 CTGGAGCTTGGGATTGCCT 59.694 57.895 0.00 0.00 0.00 4.75
2169 2387 2.421399 GCTGGAGCTTGGGATTGCC 61.421 63.158 0.00 0.00 38.21 4.52
2170 2388 1.664321 CTGCTGGAGCTTGGGATTGC 61.664 60.000 0.00 0.00 42.66 3.56
2171 2389 1.664321 GCTGCTGGAGCTTGGGATTG 61.664 60.000 14.33 0.00 45.21 2.67
2172 2390 1.379576 GCTGCTGGAGCTTGGGATT 60.380 57.895 14.33 0.00 45.21 3.01
2173 2391 2.274760 GCTGCTGGAGCTTGGGAT 59.725 61.111 14.33 0.00 45.21 3.85
2174 2392 4.399395 CGCTGCTGGAGCTTGGGA 62.399 66.667 19.01 0.00 46.64 4.37
2175 2393 4.711949 ACGCTGCTGGAGCTTGGG 62.712 66.667 19.01 5.95 46.64 4.12
2176 2394 3.429141 CACGCTGCTGGAGCTTGG 61.429 66.667 19.01 6.31 46.64 3.61
2177 2395 3.429141 CCACGCTGCTGGAGCTTG 61.429 66.667 18.53 18.53 46.64 4.01
2178 2396 3.630013 TCCACGCTGCTGGAGCTT 61.630 61.111 19.01 6.99 46.64 3.74
2179 2397 4.385405 GTCCACGCTGCTGGAGCT 62.385 66.667 19.01 3.60 46.64 4.09
2180 2398 2.897641 CTAGTCCACGCTGCTGGAGC 62.898 65.000 17.37 11.48 41.23 4.70
2181 2399 1.140589 CTAGTCCACGCTGCTGGAG 59.859 63.158 17.37 6.37 41.23 3.86
2182 2400 1.304134 TCTAGTCCACGCTGCTGGA 60.304 57.895 14.24 14.24 38.05 3.86
2183 2401 1.153745 GTCTAGTCCACGCTGCTGG 60.154 63.158 10.65 10.65 0.00 4.85
2184 2402 0.179150 GAGTCTAGTCCACGCTGCTG 60.179 60.000 0.00 0.00 0.00 4.41
2185 2403 0.322997 AGAGTCTAGTCCACGCTGCT 60.323 55.000 0.00 0.00 0.00 4.24
2186 2404 0.179150 CAGAGTCTAGTCCACGCTGC 60.179 60.000 0.00 0.00 35.32 5.25
2187 2405 1.454201 TCAGAGTCTAGTCCACGCTG 58.546 55.000 7.28 7.28 41.56 5.18
2188 2406 2.201921 TTCAGAGTCTAGTCCACGCT 57.798 50.000 0.00 0.00 0.00 5.07
2189 2407 2.987821 GTTTTCAGAGTCTAGTCCACGC 59.012 50.000 0.00 0.00 0.00 5.34
2190 2408 4.506886 AGTTTTCAGAGTCTAGTCCACG 57.493 45.455 0.00 0.00 0.00 4.94
2198 2416 8.529476 ACGTGGTATATTTAGTTTTCAGAGTCT 58.471 33.333 0.00 0.00 0.00 3.24
2199 2417 8.699283 ACGTGGTATATTTAGTTTTCAGAGTC 57.301 34.615 0.00 0.00 0.00 3.36
2208 2426 9.638239 TCGAAACTTTACGTGGTATATTTAGTT 57.362 29.630 0.00 0.00 0.00 2.24
2209 2427 9.807649 ATCGAAACTTTACGTGGTATATTTAGT 57.192 29.630 0.00 0.00 0.00 2.24
2216 2434 7.906527 GCAAAATATCGAAACTTTACGTGGTAT 59.093 33.333 0.00 0.00 0.00 2.73
2217 2435 7.118101 AGCAAAATATCGAAACTTTACGTGGTA 59.882 33.333 0.00 0.00 0.00 3.25
2218 2436 6.072893 AGCAAAATATCGAAACTTTACGTGGT 60.073 34.615 0.00 0.00 0.00 4.16
2219 2437 6.248420 CAGCAAAATATCGAAACTTTACGTGG 59.752 38.462 0.00 0.00 0.00 4.94
2220 2438 6.248420 CCAGCAAAATATCGAAACTTTACGTG 59.752 38.462 0.00 0.00 0.00 4.49
2221 2439 6.311723 CCAGCAAAATATCGAAACTTTACGT 58.688 36.000 0.00 0.00 0.00 3.57
2222 2440 5.227184 GCCAGCAAAATATCGAAACTTTACG 59.773 40.000 0.00 0.00 0.00 3.18
2223 2441 5.227184 CGCCAGCAAAATATCGAAACTTTAC 59.773 40.000 0.00 0.00 0.00 2.01
2224 2442 5.106475 ACGCCAGCAAAATATCGAAACTTTA 60.106 36.000 0.00 0.00 0.00 1.85
2225 2443 4.165779 CGCCAGCAAAATATCGAAACTTT 58.834 39.130 0.00 0.00 0.00 2.66
2226 2444 3.190535 ACGCCAGCAAAATATCGAAACTT 59.809 39.130 0.00 0.00 0.00 2.66
2227 2445 2.747446 ACGCCAGCAAAATATCGAAACT 59.253 40.909 0.00 0.00 0.00 2.66
2228 2446 2.845967 CACGCCAGCAAAATATCGAAAC 59.154 45.455 0.00 0.00 0.00 2.78
2229 2447 2.730715 GCACGCCAGCAAAATATCGAAA 60.731 45.455 0.00 0.00 0.00 3.46
2230 2448 1.202132 GCACGCCAGCAAAATATCGAA 60.202 47.619 0.00 0.00 0.00 3.71
2231 2449 0.376852 GCACGCCAGCAAAATATCGA 59.623 50.000 0.00 0.00 0.00 3.59
2232 2450 0.378257 AGCACGCCAGCAAAATATCG 59.622 50.000 0.00 0.00 36.85 2.92
2233 2451 1.672881 AGAGCACGCCAGCAAAATATC 59.327 47.619 0.00 0.00 36.85 1.63
2234 2452 1.755179 AGAGCACGCCAGCAAAATAT 58.245 45.000 0.00 0.00 36.85 1.28
2235 2453 1.468520 GAAGAGCACGCCAGCAAAATA 59.531 47.619 0.00 0.00 36.85 1.40
2236 2454 0.242017 GAAGAGCACGCCAGCAAAAT 59.758 50.000 0.00 0.00 36.85 1.82
2237 2455 1.100463 TGAAGAGCACGCCAGCAAAA 61.100 50.000 0.00 0.00 36.85 2.44
2238 2456 0.890542 ATGAAGAGCACGCCAGCAAA 60.891 50.000 0.00 0.00 36.85 3.68
2239 2457 1.302752 ATGAAGAGCACGCCAGCAA 60.303 52.632 0.00 0.00 36.85 3.91
2240 2458 2.036571 CATGAAGAGCACGCCAGCA 61.037 57.895 0.00 0.00 36.85 4.41
2241 2459 2.758089 CCATGAAGAGCACGCCAGC 61.758 63.158 0.00 0.00 0.00 4.85
2242 2460 0.674581 TTCCATGAAGAGCACGCCAG 60.675 55.000 0.00 0.00 0.00 4.85
2243 2461 0.035152 ATTCCATGAAGAGCACGCCA 60.035 50.000 0.00 0.00 0.00 5.69
2244 2462 0.659957 GATTCCATGAAGAGCACGCC 59.340 55.000 0.00 0.00 0.00 5.68
2245 2463 1.372582 TGATTCCATGAAGAGCACGC 58.627 50.000 0.00 0.00 0.00 5.34
2246 2464 2.547211 GGATGATTCCATGAAGAGCACG 59.453 50.000 0.00 0.00 42.12 5.34
2247 2465 2.883386 GGGATGATTCCATGAAGAGCAC 59.117 50.000 0.00 0.00 44.60 4.40
2248 2466 2.781757 AGGGATGATTCCATGAAGAGCA 59.218 45.455 0.00 0.00 44.60 4.26
2249 2467 3.072768 AGAGGGATGATTCCATGAAGAGC 59.927 47.826 0.00 0.00 44.60 4.09
2250 2468 4.978438 AGAGGGATGATTCCATGAAGAG 57.022 45.455 0.00 0.00 44.60 2.85
2251 2469 6.829985 TTTAGAGGGATGATTCCATGAAGA 57.170 37.500 0.00 0.00 44.60 2.87
2252 2470 7.176340 GGATTTTAGAGGGATGATTCCATGAAG 59.824 40.741 0.00 0.00 44.60 3.02
2253 2471 7.006509 GGATTTTAGAGGGATGATTCCATGAA 58.993 38.462 0.00 0.00 44.60 2.57
2254 2472 6.103057 TGGATTTTAGAGGGATGATTCCATGA 59.897 38.462 0.00 0.00 44.60 3.07
2255 2473 6.309357 TGGATTTTAGAGGGATGATTCCATG 58.691 40.000 0.00 0.00 44.60 3.66
2256 2474 6.535161 TGGATTTTAGAGGGATGATTCCAT 57.465 37.500 0.00 0.00 44.60 3.41
2257 2475 5.992564 TGGATTTTAGAGGGATGATTCCA 57.007 39.130 0.00 0.00 44.60 3.53
2258 2476 7.609532 CAGTATGGATTTTAGAGGGATGATTCC 59.390 40.741 0.00 0.00 41.77 3.01
2259 2477 8.378565 TCAGTATGGATTTTAGAGGGATGATTC 58.621 37.037 0.00 0.00 36.16 2.52
2260 2478 8.280258 TCAGTATGGATTTTAGAGGGATGATT 57.720 34.615 0.00 0.00 36.16 2.57
2261 2479 7.878621 TCAGTATGGATTTTAGAGGGATGAT 57.121 36.000 0.00 0.00 36.16 2.45
2262 2480 7.513781 TCATCAGTATGGATTTTAGAGGGATGA 59.486 37.037 0.00 0.00 35.31 2.92
2263 2481 7.683578 TCATCAGTATGGATTTTAGAGGGATG 58.316 38.462 0.00 0.00 36.16 3.51
2264 2482 7.878621 TCATCAGTATGGATTTTAGAGGGAT 57.121 36.000 0.00 0.00 36.16 3.85
2265 2483 7.127186 TGTTCATCAGTATGGATTTTAGAGGGA 59.873 37.037 0.00 0.00 36.16 4.20
2266 2484 7.282585 TGTTCATCAGTATGGATTTTAGAGGG 58.717 38.462 0.00 0.00 36.16 4.30
2267 2485 7.443575 CCTGTTCATCAGTATGGATTTTAGAGG 59.556 40.741 0.00 0.00 42.19 3.69
2268 2486 7.041508 GCCTGTTCATCAGTATGGATTTTAGAG 60.042 40.741 0.00 0.00 42.19 2.43
2269 2487 6.767902 GCCTGTTCATCAGTATGGATTTTAGA 59.232 38.462 0.00 0.00 42.19 2.10
2270 2488 6.543465 TGCCTGTTCATCAGTATGGATTTTAG 59.457 38.462 0.00 0.00 42.19 1.85
2271 2489 6.422333 TGCCTGTTCATCAGTATGGATTTTA 58.578 36.000 0.00 0.00 42.19 1.52
2272 2490 5.263599 TGCCTGTTCATCAGTATGGATTTT 58.736 37.500 0.00 0.00 42.19 1.82
2273 2491 4.858850 TGCCTGTTCATCAGTATGGATTT 58.141 39.130 0.00 0.00 42.19 2.17
2274 2492 4.508551 TGCCTGTTCATCAGTATGGATT 57.491 40.909 0.00 0.00 42.19 3.01
2275 2493 4.141321 ACATGCCTGTTCATCAGTATGGAT 60.141 41.667 0.00 0.00 42.19 3.41
2276 2494 3.200605 ACATGCCTGTTCATCAGTATGGA 59.799 43.478 0.00 0.00 42.19 3.41
2277 2495 3.314357 CACATGCCTGTTCATCAGTATGG 59.686 47.826 0.00 0.00 42.19 2.74
2278 2496 3.314357 CCACATGCCTGTTCATCAGTATG 59.686 47.826 0.00 0.00 42.19 2.39
2279 2497 3.548770 CCACATGCCTGTTCATCAGTAT 58.451 45.455 0.00 0.00 42.19 2.12
2280 2498 2.356022 CCCACATGCCTGTTCATCAGTA 60.356 50.000 0.00 0.00 42.19 2.74
2281 2499 1.615116 CCCACATGCCTGTTCATCAGT 60.615 52.381 0.00 0.00 42.19 3.41
2282 2500 1.100510 CCCACATGCCTGTTCATCAG 58.899 55.000 0.00 0.00 43.27 2.90
2283 2501 0.697658 TCCCACATGCCTGTTCATCA 59.302 50.000 0.00 0.00 31.62 3.07
2284 2502 1.952296 GATCCCACATGCCTGTTCATC 59.048 52.381 0.00 0.00 31.62 2.92
2285 2503 1.748244 CGATCCCACATGCCTGTTCAT 60.748 52.381 0.00 0.00 31.62 2.57
2286 2504 0.392863 CGATCCCACATGCCTGTTCA 60.393 55.000 0.00 0.00 31.62 3.18
2287 2505 1.097547 CCGATCCCACATGCCTGTTC 61.098 60.000 0.00 0.00 31.62 3.18
2288 2506 1.077501 CCGATCCCACATGCCTGTT 60.078 57.895 0.00 0.00 31.62 3.16
2289 2507 1.348008 ATCCGATCCCACATGCCTGT 61.348 55.000 0.00 0.00 35.44 4.00
2290 2508 0.887836 CATCCGATCCCACATGCCTG 60.888 60.000 0.00 0.00 0.00 4.85
2291 2509 1.453235 CATCCGATCCCACATGCCT 59.547 57.895 0.00 0.00 0.00 4.75
2292 2510 1.601759 CCATCCGATCCCACATGCC 60.602 63.158 0.00 0.00 0.00 4.40
2293 2511 0.886490 GACCATCCGATCCCACATGC 60.886 60.000 0.00 0.00 0.00 4.06
2294 2512 0.761187 AGACCATCCGATCCCACATG 59.239 55.000 0.00 0.00 0.00 3.21
2295 2513 1.141657 CAAGACCATCCGATCCCACAT 59.858 52.381 0.00 0.00 0.00 3.21
2296 2514 0.541392 CAAGACCATCCGATCCCACA 59.459 55.000 0.00 0.00 0.00 4.17
2297 2515 0.541863 ACAAGACCATCCGATCCCAC 59.458 55.000 0.00 0.00 0.00 4.61
2298 2516 0.830648 GACAAGACCATCCGATCCCA 59.169 55.000 0.00 0.00 0.00 4.37
2299 2517 0.106894 GGACAAGACCATCCGATCCC 59.893 60.000 0.00 0.00 0.00 3.85
2300 2518 3.688553 GGACAAGACCATCCGATCC 57.311 57.895 0.00 0.00 0.00 3.36
2305 2523 2.678336 GACAAATCGGACAAGACCATCC 59.322 50.000 0.00 0.00 0.00 3.51
2306 2524 3.334691 TGACAAATCGGACAAGACCATC 58.665 45.455 0.00 0.00 0.00 3.51
2307 2525 3.417069 TGACAAATCGGACAAGACCAT 57.583 42.857 0.00 0.00 0.00 3.55
2308 2526 2.920724 TGACAAATCGGACAAGACCA 57.079 45.000 0.00 0.00 0.00 4.02
2309 2527 2.420022 CCATGACAAATCGGACAAGACC 59.580 50.000 0.00 0.00 0.00 3.85
2310 2528 3.334691 TCCATGACAAATCGGACAAGAC 58.665 45.455 0.00 0.00 0.00 3.01
2311 2529 3.599343 CTCCATGACAAATCGGACAAGA 58.401 45.455 0.00 0.00 0.00 3.02
2312 2530 2.096496 GCTCCATGACAAATCGGACAAG 59.904 50.000 0.00 0.00 0.00 3.16
2313 2531 2.083774 GCTCCATGACAAATCGGACAA 58.916 47.619 0.00 0.00 0.00 3.18
2314 2532 1.278985 AGCTCCATGACAAATCGGACA 59.721 47.619 0.00 0.00 0.00 4.02
2315 2533 1.667724 CAGCTCCATGACAAATCGGAC 59.332 52.381 0.00 0.00 0.00 4.79
2316 2534 2.013563 GCAGCTCCATGACAAATCGGA 61.014 52.381 0.00 0.00 0.00 4.55
2317 2535 0.379669 GCAGCTCCATGACAAATCGG 59.620 55.000 0.00 0.00 0.00 4.18
2318 2536 1.063616 CAGCAGCTCCATGACAAATCG 59.936 52.381 0.00 0.00 0.00 3.34
2319 2537 2.355132 CTCAGCAGCTCCATGACAAATC 59.645 50.000 0.00 0.00 0.00 2.17
2320 2538 2.366533 CTCAGCAGCTCCATGACAAAT 58.633 47.619 0.00 0.00 0.00 2.32
2321 2539 1.612462 CCTCAGCAGCTCCATGACAAA 60.612 52.381 0.00 0.00 0.00 2.83
2322 2540 0.035725 CCTCAGCAGCTCCATGACAA 60.036 55.000 0.00 0.00 0.00 3.18
2323 2541 0.906282 TCCTCAGCAGCTCCATGACA 60.906 55.000 0.00 0.00 0.00 3.58
2324 2542 0.469070 ATCCTCAGCAGCTCCATGAC 59.531 55.000 0.00 0.00 0.00 3.06
2325 2543 2.092598 TATCCTCAGCAGCTCCATGA 57.907 50.000 0.00 0.00 0.00 3.07
2326 2544 4.548451 TTATATCCTCAGCAGCTCCATG 57.452 45.455 0.00 0.00 0.00 3.66
2327 2545 5.573380 TTTTATATCCTCAGCAGCTCCAT 57.427 39.130 0.00 0.00 0.00 3.41
2328 2546 5.573380 ATTTTATATCCTCAGCAGCTCCA 57.427 39.130 0.00 0.00 0.00 3.86
2329 2547 7.563906 AGATATTTTATATCCTCAGCAGCTCC 58.436 38.462 0.00 0.00 0.00 4.70
2330 2548 9.097257 GAAGATATTTTATATCCTCAGCAGCTC 57.903 37.037 0.00 0.00 0.00 4.09
2331 2549 8.824783 AGAAGATATTTTATATCCTCAGCAGCT 58.175 33.333 0.00 0.00 0.00 4.24
2332 2550 9.447157 AAGAAGATATTTTATATCCTCAGCAGC 57.553 33.333 7.62 0.00 0.00 5.25
2348 2566 9.410556 CGGTGAAACATTCAAAAAGAAGATATT 57.589 29.630 0.00 0.00 42.15 1.28
2349 2567 7.542130 GCGGTGAAACATTCAAAAAGAAGATAT 59.458 33.333 0.00 0.00 42.15 1.63
2350 2568 6.861055 GCGGTGAAACATTCAAAAAGAAGATA 59.139 34.615 0.00 0.00 42.15 1.98
2351 2569 5.691754 GCGGTGAAACATTCAAAAAGAAGAT 59.308 36.000 0.00 0.00 42.15 2.40
2352 2570 5.040635 GCGGTGAAACATTCAAAAAGAAGA 58.959 37.500 0.00 0.00 42.15 2.87
2353 2571 4.209080 GGCGGTGAAACATTCAAAAAGAAG 59.791 41.667 0.00 0.00 42.15 2.85
2354 2572 4.116238 GGCGGTGAAACATTCAAAAAGAA 58.884 39.130 0.00 0.00 42.15 2.52
2355 2573 3.131223 TGGCGGTGAAACATTCAAAAAGA 59.869 39.130 0.00 0.00 42.15 2.52
2356 2574 3.452474 TGGCGGTGAAACATTCAAAAAG 58.548 40.909 0.00 0.00 42.15 2.27
2357 2575 3.131223 TCTGGCGGTGAAACATTCAAAAA 59.869 39.130 0.00 0.00 42.15 1.94
2358 2576 2.690497 TCTGGCGGTGAAACATTCAAAA 59.310 40.909 0.00 0.00 42.15 2.44
2359 2577 2.293122 CTCTGGCGGTGAAACATTCAAA 59.707 45.455 0.00 0.00 42.15 2.69
2360 2578 1.879380 CTCTGGCGGTGAAACATTCAA 59.121 47.619 0.00 0.00 42.15 2.69
2361 2579 1.071542 TCTCTGGCGGTGAAACATTCA 59.928 47.619 0.00 0.00 39.98 2.57
2362 2580 1.808411 TCTCTGGCGGTGAAACATTC 58.192 50.000 0.00 0.00 39.98 2.67
2363 2581 1.880027 GTTCTCTGGCGGTGAAACATT 59.120 47.619 12.05 0.00 39.98 2.71
2364 2582 1.072331 AGTTCTCTGGCGGTGAAACAT 59.928 47.619 12.05 0.13 39.98 2.71
2365 2583 0.468226 AGTTCTCTGGCGGTGAAACA 59.532 50.000 12.05 0.00 39.98 2.83
2366 2584 1.594331 AAGTTCTCTGGCGGTGAAAC 58.406 50.000 12.05 6.31 0.00 2.78
2367 2585 1.946768 CAAAGTTCTCTGGCGGTGAAA 59.053 47.619 12.05 0.00 0.00 2.69
2368 2586 1.593196 CAAAGTTCTCTGGCGGTGAA 58.407 50.000 6.72 6.72 0.00 3.18
2369 2587 0.250295 CCAAAGTTCTCTGGCGGTGA 60.250 55.000 0.00 0.00 0.00 4.02
2370 2588 0.250295 TCCAAAGTTCTCTGGCGGTG 60.250 55.000 0.00 0.00 32.33 4.94
2371 2589 0.035458 CTCCAAAGTTCTCTGGCGGT 59.965 55.000 0.00 0.00 32.33 5.68
2372 2590 0.321671 TCTCCAAAGTTCTCTGGCGG 59.678 55.000 0.00 0.00 32.33 6.13
2373 2591 1.674221 CCTCTCCAAAGTTCTCTGGCG 60.674 57.143 0.00 0.00 32.33 5.69
2374 2592 1.948144 GCCTCTCCAAAGTTCTCTGGC 60.948 57.143 0.00 0.00 32.33 4.85
2375 2593 1.339535 GGCCTCTCCAAAGTTCTCTGG 60.340 57.143 0.00 0.00 34.01 3.86
2376 2594 1.627834 AGGCCTCTCCAAAGTTCTCTG 59.372 52.381 0.00 0.00 37.29 3.35
2377 2595 1.627834 CAGGCCTCTCCAAAGTTCTCT 59.372 52.381 0.00 0.00 37.29 3.10
2378 2596 1.339535 CCAGGCCTCTCCAAAGTTCTC 60.340 57.143 0.00 0.00 37.29 2.87
2379 2597 0.695347 CCAGGCCTCTCCAAAGTTCT 59.305 55.000 0.00 0.00 37.29 3.01
2380 2598 0.322906 CCCAGGCCTCTCCAAAGTTC 60.323 60.000 0.00 0.00 37.29 3.01
2381 2599 1.770324 CCCAGGCCTCTCCAAAGTT 59.230 57.895 0.00 0.00 37.29 2.66
2382 2600 2.911926 GCCCAGGCCTCTCCAAAGT 61.912 63.158 0.00 0.00 37.29 2.66
2383 2601 2.044551 GCCCAGGCCTCTCCAAAG 60.045 66.667 0.00 0.00 37.29 2.77
2384 2602 0.918799 TATGCCCAGGCCTCTCCAAA 60.919 55.000 0.00 0.00 41.09 3.28
2385 2603 0.698886 ATATGCCCAGGCCTCTCCAA 60.699 55.000 0.00 0.00 41.09 3.53
2386 2604 0.698886 AATATGCCCAGGCCTCTCCA 60.699 55.000 0.00 0.00 41.09 3.86
2387 2605 0.251077 CAATATGCCCAGGCCTCTCC 60.251 60.000 0.00 0.00 41.09 3.71
2388 2606 0.251077 CCAATATGCCCAGGCCTCTC 60.251 60.000 0.00 0.00 41.09 3.20
2389 2607 0.698886 TCCAATATGCCCAGGCCTCT 60.699 55.000 0.00 0.00 41.09 3.69
2390 2608 0.185901 TTCCAATATGCCCAGGCCTC 59.814 55.000 0.00 0.00 41.09 4.70
2391 2609 0.636101 TTTCCAATATGCCCAGGCCT 59.364 50.000 0.00 0.00 41.09 5.19
2392 2610 1.720781 ATTTCCAATATGCCCAGGCC 58.279 50.000 6.14 0.00 41.09 5.19
2393 2611 5.011943 TCAATAATTTCCAATATGCCCAGGC 59.988 40.000 0.38 0.38 42.35 4.85
2394 2612 6.458210 GTCAATAATTTCCAATATGCCCAGG 58.542 40.000 0.00 0.00 0.00 4.45
2395 2613 6.151691 CGTCAATAATTTCCAATATGCCCAG 58.848 40.000 0.00 0.00 0.00 4.45
2396 2614 5.010516 CCGTCAATAATTTCCAATATGCCCA 59.989 40.000 0.00 0.00 0.00 5.36
2397 2615 5.242838 TCCGTCAATAATTTCCAATATGCCC 59.757 40.000 0.00 0.00 0.00 5.36
2398 2616 6.325919 TCCGTCAATAATTTCCAATATGCC 57.674 37.500 0.00 0.00 0.00 4.40
2399 2617 5.858581 GCTCCGTCAATAATTTCCAATATGC 59.141 40.000 0.00 0.00 0.00 3.14
2400 2618 7.080099 CAGCTCCGTCAATAATTTCCAATATG 58.920 38.462 0.00 0.00 0.00 1.78
2401 2619 6.294176 GCAGCTCCGTCAATAATTTCCAATAT 60.294 38.462 0.00 0.00 0.00 1.28
2402 2620 5.008613 GCAGCTCCGTCAATAATTTCCAATA 59.991 40.000 0.00 0.00 0.00 1.90
2403 2621 4.202050 GCAGCTCCGTCAATAATTTCCAAT 60.202 41.667 0.00 0.00 0.00 3.16
2404 2622 3.128589 GCAGCTCCGTCAATAATTTCCAA 59.871 43.478 0.00 0.00 0.00 3.53
2405 2623 2.682856 GCAGCTCCGTCAATAATTTCCA 59.317 45.455 0.00 0.00 0.00 3.53
2406 2624 2.682856 TGCAGCTCCGTCAATAATTTCC 59.317 45.455 0.00 0.00 0.00 3.13
2407 2625 4.098416 GTTGCAGCTCCGTCAATAATTTC 58.902 43.478 0.00 0.00 0.00 2.17
2408 2626 3.426159 CGTTGCAGCTCCGTCAATAATTT 60.426 43.478 0.00 0.00 0.00 1.82
2409 2627 2.095853 CGTTGCAGCTCCGTCAATAATT 59.904 45.455 0.00 0.00 0.00 1.40
2410 2628 1.665679 CGTTGCAGCTCCGTCAATAAT 59.334 47.619 0.00 0.00 0.00 1.28
2411 2629 1.075542 CGTTGCAGCTCCGTCAATAA 58.924 50.000 0.00 0.00 0.00 1.40
2412 2630 0.739462 CCGTTGCAGCTCCGTCAATA 60.739 55.000 0.00 0.00 0.00 1.90
2413 2631 2.034879 CCGTTGCAGCTCCGTCAAT 61.035 57.895 0.00 0.00 0.00 2.57
2414 2632 2.664851 CCGTTGCAGCTCCGTCAA 60.665 61.111 0.00 0.00 0.00 3.18
2415 2633 3.923864 ACCGTTGCAGCTCCGTCA 61.924 61.111 0.00 0.00 0.00 4.35
2416 2634 3.414700 CACCGTTGCAGCTCCGTC 61.415 66.667 0.00 0.00 0.00 4.79
2417 2635 4.988598 CCACCGTTGCAGCTCCGT 62.989 66.667 0.00 0.00 0.00 4.69
2418 2636 3.958147 ATCCACCGTTGCAGCTCCG 62.958 63.158 0.00 0.00 0.00 4.63
2419 2637 2.045926 ATCCACCGTTGCAGCTCC 60.046 61.111 0.00 0.00 0.00 4.70
2420 2638 3.490890 GATCCACCGTTGCAGCTC 58.509 61.111 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.