Multiple sequence alignment - TraesCS3B01G292300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G292300 chr3B 100.000 5481 0 0 1630 7110 470848474 470853954 0.000000e+00 10122.0
1 TraesCS3B01G292300 chr3B 100.000 697 0 0 450 1146 470847294 470847990 0.000000e+00 1288.0
2 TraesCS3B01G292300 chr3B 100.000 219 0 0 1 219 470846845 470847063 8.590000e-109 405.0
3 TraesCS3B01G292300 chr3B 92.520 254 14 4 4797 5046 53553308 53553560 6.780000e-95 359.0
4 TraesCS3B01G292300 chr3B 91.111 90 7 1 5180 5269 382701222 382701310 3.480000e-23 121.0
5 TraesCS3B01G292300 chr3B 93.590 78 2 2 5182 5259 698409436 698409510 5.830000e-21 113.0
6 TraesCS3B01G292300 chr3D 94.768 1835 73 15 5289 7110 361372369 361374193 0.000000e+00 2835.0
7 TraesCS3B01G292300 chr3D 94.259 1167 50 7 3961 5122 361371209 361372363 0.000000e+00 1768.0
8 TraesCS3B01G292300 chr3D 93.042 1121 38 9 1646 2753 361369072 361370165 0.000000e+00 1602.0
9 TraesCS3B01G292300 chr3D 93.132 364 10 6 713 1073 361368231 361368582 2.940000e-143 520.0
10 TraesCS3B01G292300 chr3D 97.326 187 5 0 3124 3310 405542242 405542056 1.150000e-82 318.0
11 TraesCS3B01G292300 chr3D 91.518 224 18 1 2903 3126 405557477 405557255 2.490000e-79 307.0
12 TraesCS3B01G292300 chr3D 90.278 216 12 2 3760 3966 361370194 361370409 2.530000e-69 274.0
13 TraesCS3B01G292300 chr3D 87.805 123 13 2 2749 2870 405585033 405584912 7.430000e-30 143.0
14 TraesCS3B01G292300 chr3D 95.455 88 4 0 5178 5265 290585957 290585870 2.670000e-29 141.0
15 TraesCS3B01G292300 chr3D 92.222 90 6 1 5180 5269 290585870 290585958 7.490000e-25 126.0
16 TraesCS3B01G292300 chr3D 92.500 80 5 1 5182 5260 528152790 528152869 5.830000e-21 113.0
17 TraesCS3B01G292300 chr3A 91.979 1496 80 14 5626 7110 481875568 481877034 0.000000e+00 2061.0
18 TraesCS3B01G292300 chr3A 93.016 902 55 5 4086 4981 481874629 481875528 0.000000e+00 1310.0
19 TraesCS3B01G292300 chr3A 95.619 662 17 1 1630 2279 481872660 481873321 0.000000e+00 1051.0
20 TraesCS3B01G292300 chr3A 86.386 617 39 18 455 1054 481871694 481872282 3.620000e-177 632.0
21 TraesCS3B01G292300 chr3A 87.302 441 42 8 2320 2753 481873817 481874250 6.410000e-135 492.0
22 TraesCS3B01G292300 chr3A 86.145 332 33 9 3760 4089 481874280 481874600 5.280000e-91 346.0
23 TraesCS3B01G292300 chr3A 92.727 220 14 2 1 219 481871309 481871527 4.140000e-82 316.0
24 TraesCS3B01G292300 chr3A 95.699 186 8 0 3125 3310 175235689 175235504 4.170000e-77 300.0
25 TraesCS3B01G292300 chr3A 87.248 149 17 2 71 219 481871450 481871596 1.230000e-37 169.0
26 TraesCS3B01G292300 chr1B 83.153 463 44 15 3312 3752 47398815 47399265 6.690000e-105 392.0
27 TraesCS3B01G292300 chr1B 87.649 251 29 2 2881 3130 7162263 7162512 2.510000e-74 291.0
28 TraesCS3B01G292300 chr1B 94.211 190 11 0 3121 3310 47398221 47398410 2.510000e-74 291.0
29 TraesCS3B01G292300 chr6D 82.729 469 48 12 3312 3754 57792915 57792454 3.110000e-103 387.0
30 TraesCS3B01G292300 chr6D 95.045 222 10 1 2906 3126 69791054 69790833 1.470000e-91 348.0
31 TraesCS3B01G292300 chr6D 94.595 222 11 1 2906 3126 69752667 69752446 6.830000e-90 342.0
32 TraesCS3B01G292300 chr6D 94.595 222 11 1 2906 3126 69827494 69827273 6.830000e-90 342.0
33 TraesCS3B01G292300 chr6D 95.161 186 9 0 3125 3310 35016526 35016711 1.940000e-75 294.0
34 TraesCS3B01G292300 chr6D 91.716 169 13 1 2753 2920 69752783 69752615 4.290000e-57 233.0
35 TraesCS3B01G292300 chr6D 91.716 169 13 1 2753 2920 69791170 69791002 4.290000e-57 233.0
36 TraesCS3B01G292300 chr6D 91.716 169 13 1 2753 2920 69827610 69827442 4.290000e-57 233.0
37 TraesCS3B01G292300 chr6D 80.851 141 22 4 5269 5407 386524096 386524233 9.750000e-19 106.0
38 TraesCS3B01G292300 chr6D 82.500 120 19 2 5285 5403 461494235 461494117 3.510000e-18 104.0
39 TraesCS3B01G292300 chr7D 82.628 449 53 8 3326 3754 421151972 421152415 2.420000e-99 374.0
40 TraesCS3B01G292300 chr7D 95.161 186 9 0 3125 3310 421151390 421151575 1.940000e-75 294.0
41 TraesCS3B01G292300 chr7D 86.145 166 20 2 3596 3759 401787547 401787711 7.330000e-40 176.0
42 TraesCS3B01G292300 chr7D 82.581 155 19 6 5269 5419 190132451 190132601 5.790000e-26 130.0
43 TraesCS3B01G292300 chr7D 88.372 86 10 0 5180 5265 192021212 192021127 3.510000e-18 104.0
44 TraesCS3B01G292300 chr7D 86.250 80 11 0 140 219 613017280 613017201 3.530000e-13 87.9
45 TraesCS3B01G292300 chr6B 82.472 445 59 6 3326 3752 95499198 95498755 8.710000e-99 372.0
46 TraesCS3B01G292300 chr6B 91.228 228 15 5 2908 3132 41414953 41415178 8.960000e-79 305.0
47 TraesCS3B01G292300 chr6B 95.263 190 9 0 3121 3310 41416389 41416578 1.160000e-77 302.0
48 TraesCS3B01G292300 chr6B 85.065 154 22 1 3603 3755 144413763 144413916 9.550000e-34 156.0
49 TraesCS3B01G292300 chr6B 83.453 139 20 2 2783 2920 255532839 255532975 7.490000e-25 126.0
50 TraesCS3B01G292300 chr1D 89.825 285 26 2 3326 3607 413229061 413228777 5.240000e-96 363.0
51 TraesCS3B01G292300 chr1D 89.928 278 24 3 3328 3605 473703554 473703281 8.770000e-94 355.0
52 TraesCS3B01G292300 chr1D 80.319 188 34 3 5264 5450 18681411 18681596 9.620000e-29 139.0
53 TraesCS3B01G292300 chr1D 94.872 39 2 0 7072 7110 286378803 286378841 2.140000e-05 62.1
54 TraesCS3B01G292300 chr7B 81.915 470 46 16 3312 3754 725823974 725823517 1.890000e-95 361.0
55 TraesCS3B01G292300 chr7B 87.762 286 29 4 3326 3605 609212092 609211807 5.320000e-86 329.0
56 TraesCS3B01G292300 chr7B 82.759 174 23 3 2749 2920 79369429 79369261 1.600000e-31 148.0
57 TraesCS3B01G292300 chr7B 81.081 148 25 3 5269 5415 334802810 334802955 1.620000e-21 115.0
58 TraesCS3B01G292300 chr6A 81.879 447 60 5 3326 3752 52293713 52294158 2.440000e-94 357.0
59 TraesCS3B01G292300 chr6A 91.111 45 3 1 5082 5126 608153524 608153567 7.700000e-05 60.2
60 TraesCS3B01G292300 chr4A 81.290 465 61 9 3312 3754 673409491 673409031 3.160000e-93 353.0
61 TraesCS3B01G292300 chr2B 83.465 381 42 6 2747 3126 175932902 175933262 1.140000e-87 335.0
62 TraesCS3B01G292300 chr2B 78.182 165 28 6 3596 3756 770487714 770487874 1.630000e-16 99.0
63 TraesCS3B01G292300 chr2B 76.543 162 33 4 3596 3754 430217210 430217051 4.570000e-12 84.2
64 TraesCS3B01G292300 chr1A 88.070 285 31 1 3326 3607 22850844 22851128 1.140000e-87 335.0
65 TraesCS3B01G292300 chr1A 95.000 40 2 0 7071 7110 357769299 357769338 5.950000e-06 63.9
66 TraesCS3B01G292300 chr5A 92.727 220 12 3 2908 3126 639190439 639190655 1.490000e-81 315.0
67 TraesCS3B01G292300 chr5A 95.722 187 8 0 3124 3310 577439176 577438990 1.160000e-77 302.0
68 TraesCS3B01G292300 chr5A 86.726 113 12 2 5262 5373 297743381 297743491 9.690000e-24 122.0
69 TraesCS3B01G292300 chr5A 81.579 152 23 4 5262 5409 364982413 364982263 3.480000e-23 121.0
70 TraesCS3B01G292300 chr5A 86.316 95 9 4 5173 5266 554549558 554549467 4.540000e-17 100.0
71 TraesCS3B01G292300 chr5D 91.818 220 17 1 2907 3126 377301598 377301380 8.960000e-79 305.0
72 TraesCS3B01G292300 chr5D 78.571 182 21 9 4982 5163 477404216 477404379 3.510000e-18 104.0
73 TraesCS3B01G292300 chr4D 95.187 187 9 0 3124 3310 405317272 405317086 5.390000e-76 296.0
74 TraesCS3B01G292300 chr4D 87.578 161 17 2 3596 3754 497886620 497886779 4.380000e-42 183.0
75 TraesCS3B01G292300 chr4D 85.185 162 20 4 2751 2909 486097754 486097594 5.710000e-36 163.0
76 TraesCS3B01G292300 chr4D 80.503 159 28 2 3596 3754 5248895 5248740 1.250000e-22 119.0
77 TraesCS3B01G292300 chr5B 95.161 186 9 0 3125 3310 47725864 47726049 1.940000e-75 294.0
78 TraesCS3B01G292300 chr5B 81.481 162 23 5 3596 3754 65519040 65518883 7.490000e-25 126.0
79 TraesCS3B01G292300 chr5B 79.286 140 13 13 4981 5113 611686084 611685954 4.570000e-12 84.2
80 TraesCS3B01G292300 chr5B 97.436 39 1 0 5262 5300 484833262 484833224 4.600000e-07 67.6
81 TraesCS3B01G292300 chr5B 91.837 49 3 1 4982 5030 585034920 585034967 4.600000e-07 67.6
82 TraesCS3B01G292300 chr7A 85.632 174 24 1 2748 2920 74434312 74434485 1.580000e-41 182.0
83 TraesCS3B01G292300 chr4B 83.929 168 25 1 2753 2918 530210341 530210508 7.380000e-35 159.0
84 TraesCS3B01G292300 chr4B 100.000 28 0 0 2749 2776 237141615 237141588 1.300000e-02 52.8
85 TraesCS3B01G292300 chr2D 91.111 90 5 2 5184 5272 114515579 114515492 1.250000e-22 119.0
86 TraesCS3B01G292300 chr2D 88.235 102 8 3 5174 5273 114515493 114515592 1.250000e-22 119.0
87 TraesCS3B01G292300 chr2A 85.294 68 9 1 5295 5361 30182547 30182614 1.280000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G292300 chr3B 470846845 470853954 7109 False 3938.333333 10122 100.00000 1 7110 3 chr3B.!!$F4 7109
1 TraesCS3B01G292300 chr3D 361368231 361374193 5962 False 1399.800000 2835 93.09580 713 7110 5 chr3D.!!$F3 6397
2 TraesCS3B01G292300 chr3A 481871309 481877034 5725 False 797.125000 2061 90.05275 1 7110 8 chr3A.!!$F1 7109
3 TraesCS3B01G292300 chr1B 47398221 47399265 1044 False 341.500000 392 88.68200 3121 3752 2 chr1B.!!$F2 631
4 TraesCS3B01G292300 chr7D 421151390 421152415 1025 False 334.000000 374 88.89450 3125 3754 2 chr7D.!!$F3 629
5 TraesCS3B01G292300 chr6B 41414953 41416578 1625 False 303.500000 305 93.24550 2908 3310 2 chr6B.!!$F3 402

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
797 880 0.034896 GTGAGAAGGCACGGAAAGGA 59.965 55.0 0.00 0.00 0.00 3.36 F
2111 2544 0.248215 CGCGGCATTAGCAAAGAAGG 60.248 55.0 0.00 0.00 44.61 3.46 F
2830 3725 0.179200 AATAGCGGTTTTTGCGCTCG 60.179 50.0 9.73 4.29 39.78 5.03 F
3741 6296 0.179200 CTAAAATCGCGCGCCTGTTT 60.179 50.0 27.95 22.93 0.00 2.83 F
5173 8579 0.741326 TTGCAGCTACAAAAACCGCA 59.259 45.0 0.00 0.00 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2383 3271 0.898320 ATCCGAGGTGAACACTCCAG 59.102 55.000 4.96 0.0 0.0 3.86 R
3450 5986 1.229853 CCAACCCCTCCCTACACCT 60.230 63.158 0.00 0.0 0.0 4.00 R
4600 8004 1.317613 ACATGTTTTCGCAGCTTCCA 58.682 45.000 0.00 0.0 0.0 3.53 R
5175 8581 0.113776 TGGAACGGAGGGAGTACTGT 59.886 55.000 0.00 0.0 0.0 3.55 R
6891 10315 0.467290 TTGGTTTCTGAGGCACCCAC 60.467 55.000 0.00 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 38 8.034313 TGAAGCCCAAATACTAAGATCTATGT 57.966 34.615 0.00 0.37 0.00 2.29
42 44 6.587990 CCAAATACTAAGATCTATGTCGGCTG 59.412 42.308 0.00 0.00 0.00 4.85
45 47 2.522836 AAGATCTATGTCGGCTGCTG 57.477 50.000 0.95 0.95 0.00 4.41
124 126 3.536164 CCACCTTGTGCTTGGCAA 58.464 55.556 0.00 0.00 41.47 4.52
127 129 1.606224 CCACCTTGTGCTTGGCAAATC 60.606 52.381 0.00 0.00 41.47 2.17
139 141 1.591183 GCAAATCCATGCCCGTTGT 59.409 52.632 0.00 0.00 40.49 3.32
197 267 1.590932 CACCACATGCTAGGCAGATC 58.409 55.000 0.00 0.00 43.65 2.75
486 556 1.408702 TGCTTTTCTGCAACAAGACCC 59.591 47.619 3.86 0.00 40.29 4.46
487 557 1.269778 GCTTTTCTGCAACAAGACCCC 60.270 52.381 3.86 0.00 0.00 4.95
488 558 1.001378 CTTTTCTGCAACAAGACCCCG 60.001 52.381 0.00 0.00 0.00 5.73
489 559 0.821711 TTTCTGCAACAAGACCCCGG 60.822 55.000 0.00 0.00 0.00 5.73
491 561 2.203280 TGCAACAAGACCCCGGTG 60.203 61.111 0.00 0.00 0.00 4.94
492 562 2.203294 GCAACAAGACCCCGGTGT 60.203 61.111 0.00 0.00 0.00 4.16
493 563 1.071814 GCAACAAGACCCCGGTGTA 59.928 57.895 0.00 0.00 0.00 2.90
553 627 5.772825 AAACATTCTGCAACAAGAGCTTA 57.227 34.783 0.00 0.00 0.00 3.09
583 666 4.081406 TGCAACAAGAGCAAATCCTGTAT 58.919 39.130 0.00 0.00 39.39 2.29
594 677 8.084684 AGAGCAAATCCTGTATCAAAACTTTTC 58.915 33.333 0.00 0.00 0.00 2.29
605 688 8.342634 TGTATCAAAACTTTTCTGCAACTAGAC 58.657 33.333 0.00 0.00 0.00 2.59
654 737 6.449635 ACAAGACTTGTTTTGCAATAGTGA 57.550 33.333 15.23 0.00 42.22 3.41
656 739 6.974622 ACAAGACTTGTTTTGCAATAGTGAAG 59.025 34.615 15.23 1.57 42.22 3.02
657 740 6.076981 AGACTTGTTTTGCAATAGTGAAGG 57.923 37.500 0.00 0.00 36.36 3.46
660 743 4.870123 TGTTTTGCAATAGTGAAGGCAT 57.130 36.364 0.00 0.00 35.98 4.40
661 744 4.808558 TGTTTTGCAATAGTGAAGGCATC 58.191 39.130 0.00 0.00 35.98 3.91
662 745 4.176271 GTTTTGCAATAGTGAAGGCATCC 58.824 43.478 0.00 0.00 35.98 3.51
663 746 2.057137 TGCAATAGTGAAGGCATCCC 57.943 50.000 0.00 0.00 0.00 3.85
664 747 1.565759 TGCAATAGTGAAGGCATCCCT 59.434 47.619 0.00 0.00 45.77 4.20
665 748 2.225467 GCAATAGTGAAGGCATCCCTC 58.775 52.381 0.00 0.00 41.90 4.30
666 749 2.421952 GCAATAGTGAAGGCATCCCTCA 60.422 50.000 0.00 0.00 41.90 3.86
667 750 3.749954 GCAATAGTGAAGGCATCCCTCAT 60.750 47.826 0.00 0.00 41.90 2.90
668 751 4.070716 CAATAGTGAAGGCATCCCTCATC 58.929 47.826 0.00 0.00 41.90 2.92
669 752 0.842635 AGTGAAGGCATCCCTCATCC 59.157 55.000 0.00 0.00 41.90 3.51
670 753 0.533755 GTGAAGGCATCCCTCATCCG 60.534 60.000 0.00 0.00 41.90 4.18
671 754 0.982852 TGAAGGCATCCCTCATCCGT 60.983 55.000 0.00 0.00 41.90 4.69
672 755 1.048601 GAAGGCATCCCTCATCCGTA 58.951 55.000 0.00 0.00 41.90 4.02
673 756 1.001406 GAAGGCATCCCTCATCCGTAG 59.999 57.143 0.00 0.00 41.90 3.51
674 757 0.188587 AGGCATCCCTCATCCGTAGA 59.811 55.000 0.00 0.00 36.46 2.59
675 758 1.203237 AGGCATCCCTCATCCGTAGAT 60.203 52.381 0.00 0.00 36.46 1.98
676 759 1.205893 GGCATCCCTCATCCGTAGATC 59.794 57.143 0.00 0.00 0.00 2.75
677 760 1.205893 GCATCCCTCATCCGTAGATCC 59.794 57.143 0.00 0.00 0.00 3.36
678 761 1.474478 CATCCCTCATCCGTAGATCCG 59.526 57.143 0.00 0.00 0.00 4.18
681 764 0.517755 CCTCATCCGTAGATCCGACG 59.482 60.000 10.12 10.12 40.02 5.12
690 773 4.329697 GATCCGACGGCTCGCGAT 62.330 66.667 10.36 0.00 38.70 4.58
693 776 2.901051 ATCCGACGGCTCGCGATTTT 62.901 55.000 10.36 0.00 38.70 1.82
701 784 0.867329 GCTCGCGATTTTGCCAATCC 60.867 55.000 10.36 0.00 0.00 3.01
717 800 4.690748 GCCAATCCTTTAAAAAGTTCAGCC 59.309 41.667 2.03 0.00 34.20 4.85
797 880 0.034896 GTGAGAAGGCACGGAAAGGA 59.965 55.000 0.00 0.00 0.00 3.36
803 886 2.990066 AGGCACGGAAAGGAGATTAG 57.010 50.000 0.00 0.00 0.00 1.73
825 909 4.593206 AGATCTGATACGGGCTCCAAATTA 59.407 41.667 0.00 0.00 0.00 1.40
843 927 6.316319 CAAATTAAATTTGGCAGGACATTGC 58.684 36.000 0.00 0.00 44.44 3.56
899 983 1.656652 GGAACTCATCACACCCGATG 58.343 55.000 0.00 0.00 43.50 3.84
900 984 1.066143 GGAACTCATCACACCCGATGT 60.066 52.381 0.00 0.00 44.81 3.06
901 985 2.615493 GGAACTCATCACACCCGATGTT 60.615 50.000 0.00 0.00 40.64 2.71
1118 1539 3.462678 GCCGTCCTCTCCCACCTC 61.463 72.222 0.00 0.00 0.00 3.85
1119 1540 3.141488 CCGTCCTCTCCCACCTCG 61.141 72.222 0.00 0.00 0.00 4.63
1120 1541 3.827898 CGTCCTCTCCCACCTCGC 61.828 72.222 0.00 0.00 0.00 5.03
1121 1542 2.363147 GTCCTCTCCCACCTCGCT 60.363 66.667 0.00 0.00 0.00 4.93
1122 1543 2.043852 TCCTCTCCCACCTCGCTC 60.044 66.667 0.00 0.00 0.00 5.03
1123 1544 3.151022 CCTCTCCCACCTCGCTCC 61.151 72.222 0.00 0.00 0.00 4.70
1124 1545 2.043450 CTCTCCCACCTCGCTCCT 60.043 66.667 0.00 0.00 0.00 3.69
1125 1546 2.043852 TCTCCCACCTCGCTCCTC 60.044 66.667 0.00 0.00 0.00 3.71
1126 1547 3.151022 CTCCCACCTCGCTCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
1127 1548 3.670629 CTCCCACCTCGCTCCTCCT 62.671 68.421 0.00 0.00 0.00 3.69
1128 1549 3.151022 CCCACCTCGCTCCTCCTC 61.151 72.222 0.00 0.00 0.00 3.71
1129 1550 3.522731 CCACCTCGCTCCTCCTCG 61.523 72.222 0.00 0.00 0.00 4.63
1130 1551 4.200283 CACCTCGCTCCTCCTCGC 62.200 72.222 0.00 0.00 0.00 5.03
1690 2111 1.040339 CCCACCTCCTCTTCCTCTCG 61.040 65.000 0.00 0.00 0.00 4.04
2008 2429 2.692368 ATGGAGGTCGCCATGGGT 60.692 61.111 15.13 0.00 46.62 4.51
2076 2497 2.437413 GAGTTTGATGAAGGGTGGGAC 58.563 52.381 0.00 0.00 0.00 4.46
2111 2544 0.248215 CGCGGCATTAGCAAAGAAGG 60.248 55.000 0.00 0.00 44.61 3.46
2118 2551 0.881118 TTAGCAAAGAAGGGCTTGCG 59.119 50.000 3.20 0.00 41.41 4.85
2268 2701 9.329913 CGTTTTATAACCAGACAATCAAAGAAG 57.670 33.333 0.00 0.00 0.00 2.85
2403 3291 2.100197 CTGGAGTGTTCACCTCGGATA 58.900 52.381 0.00 0.00 0.00 2.59
2414 3302 7.657761 GTGTTCACCTCGGATATTCAAGATAAT 59.342 37.037 0.00 0.00 0.00 1.28
2419 3307 9.658799 CACCTCGGATATTCAAGATAATGTAAT 57.341 33.333 0.00 0.00 0.00 1.89
2428 3316 7.936496 TTCAAGATAATGTAATTGTGCCAGA 57.064 32.000 0.00 0.00 36.99 3.86
2444 3332 3.507233 TGCCAGAGGAAATGATGAAACAC 59.493 43.478 0.00 0.00 0.00 3.32
2588 3482 7.027874 TGGGTCAGTAAATGGTCTTCTTATT 57.972 36.000 0.00 0.00 0.00 1.40
2589 3483 7.466804 TGGGTCAGTAAATGGTCTTCTTATTT 58.533 34.615 0.00 0.00 0.00 1.40
2590 3484 8.607713 TGGGTCAGTAAATGGTCTTCTTATTTA 58.392 33.333 0.00 0.00 0.00 1.40
2591 3485 9.628500 GGGTCAGTAAATGGTCTTCTTATTTAT 57.372 33.333 0.00 0.00 31.33 1.40
2695 3589 4.404394 TGCCTGTTCTTATGTTATCTCGGA 59.596 41.667 0.00 0.00 0.00 4.55
2717 3611 2.289010 CCCATTTTCTCCAAACTGGTGC 60.289 50.000 3.89 0.00 39.60 5.01
2724 3619 2.627699 TCTCCAAACTGGTGCCATTTTC 59.372 45.455 3.94 0.00 39.03 2.29
2773 3668 3.181367 CATCTCCAACAGGTGCGC 58.819 61.111 0.00 0.00 0.00 6.09
2774 3669 1.672030 CATCTCCAACAGGTGCGCA 60.672 57.895 5.66 5.66 0.00 6.09
2775 3670 1.073025 ATCTCCAACAGGTGCGCAA 59.927 52.632 14.00 0.00 0.00 4.85
2776 3671 1.237285 ATCTCCAACAGGTGCGCAAC 61.237 55.000 20.21 20.21 0.00 4.17
2798 3693 4.450955 CGGCGCGCTAAAACATTT 57.549 50.000 32.29 0.00 0.00 2.32
2799 3694 2.719454 CGGCGCGCTAAAACATTTT 58.281 47.368 32.29 0.00 0.00 1.82
2800 3695 1.056869 CGGCGCGCTAAAACATTTTT 58.943 45.000 32.29 0.00 0.00 1.94
2801 3696 2.243407 CGGCGCGCTAAAACATTTTTA 58.757 42.857 32.29 0.00 0.00 1.52
2802 3697 2.025921 CGGCGCGCTAAAACATTTTTAC 59.974 45.455 32.29 7.64 0.00 2.01
2803 3698 2.981140 GGCGCGCTAAAACATTTTTACA 59.019 40.909 32.29 0.00 0.00 2.41
2804 3699 3.058913 GGCGCGCTAAAACATTTTTACAG 59.941 43.478 32.29 0.00 0.00 2.74
2805 3700 3.479707 GCGCGCTAAAACATTTTTACAGC 60.480 43.478 26.67 0.00 32.91 4.40
2807 3702 4.212279 CGCTAAAACATTTTTACAGCGC 57.788 40.909 15.72 0.00 43.57 5.92
2808 3703 3.240899 CGCTAAAACATTTTTACAGCGCG 60.241 43.478 15.72 0.00 43.57 6.86
2809 3704 3.058913 GCTAAAACATTTTTACAGCGCGG 59.941 43.478 8.83 5.83 0.00 6.46
2810 3705 3.357166 AAAACATTTTTACAGCGCGGA 57.643 38.095 16.26 0.00 0.00 5.54
2811 3706 3.357166 AAACATTTTTACAGCGCGGAA 57.643 38.095 16.26 3.32 0.00 4.30
2812 3707 3.357166 AACATTTTTACAGCGCGGAAA 57.643 38.095 16.26 10.08 0.00 3.13
2813 3708 3.569250 ACATTTTTACAGCGCGGAAAT 57.431 38.095 16.26 7.20 0.00 2.17
2814 3709 4.688511 ACATTTTTACAGCGCGGAAATA 57.311 36.364 16.26 8.41 0.00 1.40
2815 3710 4.658071 ACATTTTTACAGCGCGGAAATAG 58.342 39.130 16.26 8.07 0.00 1.73
2816 3711 2.817538 TTTTACAGCGCGGAAATAGC 57.182 45.000 16.26 0.00 0.00 2.97
2825 3720 0.989164 GCGGAAATAGCGGTTTTTGC 59.011 50.000 7.77 9.55 0.00 3.68
2826 3721 1.255767 CGGAAATAGCGGTTTTTGCG 58.744 50.000 23.87 23.87 39.59 4.85
2827 3722 0.989164 GGAAATAGCGGTTTTTGCGC 59.011 50.000 7.77 0.00 37.44 6.09
2828 3723 1.402325 GGAAATAGCGGTTTTTGCGCT 60.402 47.619 9.73 0.00 42.02 5.92
2829 3724 1.911464 GAAATAGCGGTTTTTGCGCTC 59.089 47.619 9.73 0.00 39.78 5.03
2830 3725 0.179200 AATAGCGGTTTTTGCGCTCG 60.179 50.000 9.73 4.29 39.78 5.03
2831 3726 1.977594 ATAGCGGTTTTTGCGCTCGG 61.978 55.000 9.73 0.04 39.78 4.63
2865 3760 4.264638 GCGGCCGCGGCAAAATAT 62.265 61.111 46.88 0.00 44.11 1.28
2866 3761 2.353376 CGGCCGCGGCAAAATATG 60.353 61.111 46.88 24.51 44.11 1.78
2867 3762 2.027460 GGCCGCGGCAAAATATGG 59.973 61.111 46.88 10.06 44.11 2.74
2873 3768 3.024043 GGCAAAATATGGCGCGCG 61.024 61.111 28.44 28.44 45.46 6.86
2874 3769 3.681318 GCAAAATATGGCGCGCGC 61.681 61.111 44.40 44.40 41.06 6.86
2875 3770 3.378042 CAAAATATGGCGCGCGCG 61.378 61.111 45.73 45.73 43.06 6.86
2904 3799 4.582760 CGGGCACGCTAACTTACA 57.417 55.556 0.00 0.00 0.00 2.41
2905 3800 2.369870 CGGGCACGCTAACTTACAG 58.630 57.895 0.00 0.00 0.00 2.74
2906 3801 1.693083 CGGGCACGCTAACTTACAGC 61.693 60.000 0.00 0.00 35.61 4.40
2911 3806 2.316687 GCTAACTTACAGCGCGCG 59.683 61.111 28.44 28.44 0.00 6.86
2912 3807 2.316687 CTAACTTACAGCGCGCGC 59.683 61.111 45.10 45.10 42.33 6.86
2943 3838 2.369870 CGGGCACGCTAACTTACAG 58.630 57.895 0.00 0.00 0.00 2.74
3062 3958 6.775088 AGACATAACATAGTTCAATTGCACG 58.225 36.000 0.00 0.00 0.00 5.34
3063 3959 5.879237 ACATAACATAGTTCAATTGCACGG 58.121 37.500 0.00 0.00 0.00 4.94
3071 3967 0.522626 TCAATTGCACGGCACATCAG 59.477 50.000 0.00 0.00 38.71 2.90
3094 3990 3.518992 ATCATGCCACATCATCATCCA 57.481 42.857 0.00 0.00 0.00 3.41
3102 3998 3.765511 CCACATCATCATCCAACCAAGTT 59.234 43.478 0.00 0.00 0.00 2.66
3103 3999 4.142315 CCACATCATCATCCAACCAAGTTC 60.142 45.833 0.00 0.00 0.00 3.01
3104 4000 4.460034 CACATCATCATCCAACCAAGTTCA 59.540 41.667 0.00 0.00 0.00 3.18
3111 4007 5.841810 TCATCCAACCAAGTTCAAAATCAC 58.158 37.500 0.00 0.00 0.00 3.06
3170 5289 5.065914 TCCAATATGCATCTCTACTTTGGC 58.934 41.667 0.19 0.00 33.91 4.52
3310 5429 1.001974 TCGTCCACCTCAAACTCATGG 59.998 52.381 0.00 0.00 0.00 3.66
3311 5430 1.826385 GTCCACCTCAAACTCATGGG 58.174 55.000 0.00 0.00 0.00 4.00
3313 5432 1.308069 CCACCTCAAACTCATGGGCG 61.308 60.000 0.00 0.00 0.00 6.13
3314 5433 0.321564 CACCTCAAACTCATGGGCGA 60.322 55.000 0.00 0.00 0.00 5.54
3316 5435 1.019673 CCTCAAACTCATGGGCGATG 58.980 55.000 2.72 2.72 0.00 3.84
3505 6041 1.378531 CTTCCATCGGCCGAATTTCA 58.621 50.000 34.66 14.33 0.00 2.69
3641 6193 0.577269 GCGCGCTGAACCAACTATAG 59.423 55.000 26.67 0.00 0.00 1.31
3645 6197 1.651987 GCTGAACCAACTATAGCGCA 58.348 50.000 11.47 0.00 0.00 6.09
3720 6274 1.133869 GCGATTTTTACAGCGCGGT 59.866 52.632 19.03 19.03 40.06 5.68
3741 6296 0.179200 CTAAAATCGCGCGCCTGTTT 60.179 50.000 27.95 22.93 0.00 2.83
3754 6309 3.201290 CGCCTGTTTGAGATGCTCTAAT 58.799 45.455 0.00 0.00 29.44 1.73
3755 6310 3.624861 CGCCTGTTTGAGATGCTCTAATT 59.375 43.478 0.00 0.00 29.44 1.40
3756 6311 4.095483 CGCCTGTTTGAGATGCTCTAATTT 59.905 41.667 0.00 0.00 29.44 1.82
3757 6312 5.338365 GCCTGTTTGAGATGCTCTAATTTG 58.662 41.667 0.00 0.00 29.44 2.32
3758 6313 5.105997 GCCTGTTTGAGATGCTCTAATTTGT 60.106 40.000 0.00 0.00 29.44 2.83
3799 6355 6.207810 GGTAAACAACATTTGGTACCTCATGA 59.792 38.462 23.33 0.00 39.98 3.07
3862 6418 6.749139 TGTGTTCATAGTCATAGGTATCAGC 58.251 40.000 0.00 0.00 0.00 4.26
3898 6462 9.056005 CATACATTGTGTGCCATATTTACTAGT 57.944 33.333 0.00 0.00 0.00 2.57
3912 6476 8.972349 CATATTTACTAGTACTGTGCTGATGTG 58.028 37.037 5.39 0.00 0.00 3.21
3917 6481 4.541973 AGTACTGTGCTGATGTGAATGA 57.458 40.909 0.00 0.00 0.00 2.57
3955 6519 5.044428 TGAGTACTTGAGTAGCTTTCGTC 57.956 43.478 0.00 0.00 0.00 4.20
4113 7513 6.893005 ACTAAAGTTCTCTCATACCACTAGCT 59.107 38.462 0.00 0.00 0.00 3.32
4117 7517 5.955355 AGTTCTCTCATACCACTAGCTTCTT 59.045 40.000 0.00 0.00 0.00 2.52
4137 7540 4.532521 TCTTGAAGGACCCCTTTTCTAGAG 59.467 45.833 0.00 0.00 44.82 2.43
4138 7541 2.572104 TGAAGGACCCCTTTTCTAGAGC 59.428 50.000 0.00 0.00 44.82 4.09
4139 7542 2.344093 AGGACCCCTTTTCTAGAGCA 57.656 50.000 0.00 0.00 0.00 4.26
4148 7551 5.112686 CCCTTTTCTAGAGCATGTACTGTC 58.887 45.833 0.00 0.00 0.00 3.51
4222 7625 7.701539 TTACACAGCAATTCATATCTGGTTT 57.298 32.000 0.00 0.00 0.00 3.27
4319 7723 4.457834 AAACAAGGTCTATGACTCTCCG 57.542 45.455 0.00 0.00 32.47 4.63
4511 7915 7.963981 TGATAAAATCAGTTAAAGCTGTCTCG 58.036 34.615 0.00 0.00 37.70 4.04
4600 8004 4.761739 TCTTCGAAATGCTGAATTGGAACT 59.238 37.500 0.00 0.00 0.00 3.01
4610 8014 0.883833 AATTGGAACTGGAAGCTGCG 59.116 50.000 0.00 0.00 37.60 5.18
4718 8122 6.981559 GGCTTTGTTCTTTTTACATTGTGGTA 59.018 34.615 0.00 0.00 0.00 3.25
4763 8167 3.838120 TCAGAGTATTTGTGCAGAGACG 58.162 45.455 0.00 0.00 0.00 4.18
4832 8236 2.008045 GCATTGCCGGCATTTGATGTT 61.008 47.619 32.61 10.77 0.00 2.71
4850 8254 9.621629 TTTGATGTTAAGTCTCCTAAAAGTGAA 57.378 29.630 0.00 0.00 0.00 3.18
4852 8256 7.878127 TGATGTTAAGTCTCCTAAAAGTGAAGG 59.122 37.037 0.00 0.00 0.00 3.46
4876 8280 3.845781 TGATAGTGATGGGGAAAGAGC 57.154 47.619 0.00 0.00 0.00 4.09
4913 8317 2.421424 GCTCTCAGGTTTGTAGCATTGG 59.579 50.000 0.00 0.00 35.71 3.16
4935 8339 5.355910 TGGCTTAGTTCTTTTGTTCTCGTTT 59.644 36.000 0.00 0.00 0.00 3.60
4983 8389 8.420374 TCTTTTAGAAGTGCATAGTTATTCGG 57.580 34.615 0.00 0.00 34.41 4.30
5009 8415 4.016666 TGGATTTTTGGGACATGGGTCTAT 60.017 41.667 0.00 0.00 43.77 1.98
5026 8432 0.875908 TATGCGCACTCGATTCAGCC 60.876 55.000 14.90 0.00 38.10 4.85
5070 8476 6.790123 AGTTGGAACTTCTTTGTGTCAAACAC 60.790 38.462 3.29 3.29 42.10 3.32
5090 8496 4.950475 ACACAGTCTAGCACTCTAGCATAA 59.050 41.667 0.00 0.00 41.59 1.90
5093 8499 7.081349 CACAGTCTAGCACTCTAGCATAATAC 58.919 42.308 0.00 0.00 41.59 1.89
5094 8500 7.001674 ACAGTCTAGCACTCTAGCATAATACT 58.998 38.462 0.00 0.00 41.59 2.12
5095 8501 7.174253 ACAGTCTAGCACTCTAGCATAATACTC 59.826 40.741 0.00 0.00 41.59 2.59
5096 8502 7.174080 CAGTCTAGCACTCTAGCATAATACTCA 59.826 40.741 0.00 0.00 41.59 3.41
5097 8503 7.174253 AGTCTAGCACTCTAGCATAATACTCAC 59.826 40.741 0.00 0.00 41.59 3.51
5105 8511 9.517609 ACTCTAGCATAATACTCACGTTTAAAG 57.482 33.333 0.00 0.00 0.00 1.85
5122 8528 8.013378 ACGTTTAAAGTTTCGGAACATAATGAG 58.987 33.333 9.76 5.31 38.26 2.90
5124 8530 9.673454 GTTTAAAGTTTCGGAACATAATGAGTT 57.327 29.630 9.76 0.00 38.26 3.01
5140 8546 8.642885 CATAATGAGTTATGTCGTATTCTGAGC 58.357 37.037 1.07 0.00 41.38 4.26
5141 8547 4.598062 TGAGTTATGTCGTATTCTGAGCG 58.402 43.478 0.00 0.00 0.00 5.03
5142 8548 4.334481 TGAGTTATGTCGTATTCTGAGCGA 59.666 41.667 0.00 0.00 0.00 4.93
5143 8549 5.163693 TGAGTTATGTCGTATTCTGAGCGAA 60.164 40.000 0.00 0.00 36.37 4.70
5144 8550 5.647589 AGTTATGTCGTATTCTGAGCGAAA 58.352 37.500 0.00 0.00 36.37 3.46
5145 8551 6.097356 AGTTATGTCGTATTCTGAGCGAAAA 58.903 36.000 0.00 0.00 36.37 2.29
5146 8552 6.588756 AGTTATGTCGTATTCTGAGCGAAAAA 59.411 34.615 0.00 0.00 36.37 1.94
5169 8575 8.446489 AAAAACAAAATTGCAGCTACAAAAAC 57.554 26.923 2.88 0.00 32.27 2.43
5170 8576 5.733226 ACAAAATTGCAGCTACAAAAACC 57.267 34.783 2.88 0.00 32.27 3.27
5171 8577 4.269844 ACAAAATTGCAGCTACAAAAACCG 59.730 37.500 2.88 0.00 32.27 4.44
5172 8578 2.064573 ATTGCAGCTACAAAAACCGC 57.935 45.000 2.88 0.00 32.27 5.68
5173 8579 0.741326 TTGCAGCTACAAAAACCGCA 59.259 45.000 0.00 0.00 0.00 5.69
5174 8580 0.741326 TGCAGCTACAAAAACCGCAA 59.259 45.000 0.00 0.00 0.00 4.85
5175 8581 1.135139 TGCAGCTACAAAAACCGCAAA 59.865 42.857 0.00 0.00 0.00 3.68
5176 8582 1.521006 GCAGCTACAAAAACCGCAAAC 59.479 47.619 0.00 0.00 0.00 2.93
5177 8583 2.803451 CAGCTACAAAAACCGCAAACA 58.197 42.857 0.00 0.00 0.00 2.83
5178 8584 2.788786 CAGCTACAAAAACCGCAAACAG 59.211 45.455 0.00 0.00 0.00 3.16
5179 8585 2.425668 AGCTACAAAAACCGCAAACAGT 59.574 40.909 0.00 0.00 0.00 3.55
5180 8586 3.628487 AGCTACAAAAACCGCAAACAGTA 59.372 39.130 0.00 0.00 0.00 2.74
5181 8587 3.727227 GCTACAAAAACCGCAAACAGTAC 59.273 43.478 0.00 0.00 0.00 2.73
5182 8588 4.496840 GCTACAAAAACCGCAAACAGTACT 60.497 41.667 0.00 0.00 0.00 2.73
5183 8589 4.023739 ACAAAAACCGCAAACAGTACTC 57.976 40.909 0.00 0.00 0.00 2.59
5184 8590 3.181494 ACAAAAACCGCAAACAGTACTCC 60.181 43.478 0.00 0.00 0.00 3.85
5185 8591 1.601166 AAACCGCAAACAGTACTCCC 58.399 50.000 0.00 0.00 0.00 4.30
5186 8592 0.763035 AACCGCAAACAGTACTCCCT 59.237 50.000 0.00 0.00 0.00 4.20
5187 8593 0.320697 ACCGCAAACAGTACTCCCTC 59.679 55.000 0.00 0.00 0.00 4.30
5188 8594 0.391263 CCGCAAACAGTACTCCCTCC 60.391 60.000 0.00 0.00 0.00 4.30
5189 8595 0.736325 CGCAAACAGTACTCCCTCCG 60.736 60.000 0.00 0.00 0.00 4.63
5190 8596 0.320697 GCAAACAGTACTCCCTCCGT 59.679 55.000 0.00 0.00 0.00 4.69
5191 8597 1.270678 GCAAACAGTACTCCCTCCGTT 60.271 52.381 0.00 0.00 0.00 4.44
5192 8598 2.685100 CAAACAGTACTCCCTCCGTTC 58.315 52.381 0.00 0.00 0.00 3.95
5193 8599 1.264295 AACAGTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
5194 8600 0.113776 ACAGTACTCCCTCCGTTCCA 59.886 55.000 0.00 0.00 0.00 3.53
5195 8601 1.273098 ACAGTACTCCCTCCGTTCCAT 60.273 52.381 0.00 0.00 0.00 3.41
5196 8602 2.024655 ACAGTACTCCCTCCGTTCCATA 60.025 50.000 0.00 0.00 0.00 2.74
5197 8603 3.231818 CAGTACTCCCTCCGTTCCATAT 58.768 50.000 0.00 0.00 0.00 1.78
5198 8604 3.641906 CAGTACTCCCTCCGTTCCATATT 59.358 47.826 0.00 0.00 0.00 1.28
5199 8605 4.101119 CAGTACTCCCTCCGTTCCATATTT 59.899 45.833 0.00 0.00 0.00 1.40
5200 8606 3.560636 ACTCCCTCCGTTCCATATTTG 57.439 47.619 0.00 0.00 0.00 2.32
5201 8607 2.844348 ACTCCCTCCGTTCCATATTTGT 59.156 45.455 0.00 0.00 0.00 2.83
5202 8608 3.265995 ACTCCCTCCGTTCCATATTTGTT 59.734 43.478 0.00 0.00 0.00 2.83
5203 8609 3.616219 TCCCTCCGTTCCATATTTGTTG 58.384 45.455 0.00 0.00 0.00 3.33
5204 8610 3.009695 TCCCTCCGTTCCATATTTGTTGT 59.990 43.478 0.00 0.00 0.00 3.32
5205 8611 3.377172 CCCTCCGTTCCATATTTGTTGTC 59.623 47.826 0.00 0.00 0.00 3.18
5206 8612 3.063452 CCTCCGTTCCATATTTGTTGTCG 59.937 47.826 0.00 0.00 0.00 4.35
5207 8613 2.417239 TCCGTTCCATATTTGTTGTCGC 59.583 45.455 0.00 0.00 0.00 5.19
5208 8614 2.418628 CCGTTCCATATTTGTTGTCGCT 59.581 45.455 0.00 0.00 0.00 4.93
5209 8615 3.416277 CGTTCCATATTTGTTGTCGCTG 58.584 45.455 0.00 0.00 0.00 5.18
5210 8616 3.124466 CGTTCCATATTTGTTGTCGCTGA 59.876 43.478 0.00 0.00 0.00 4.26
5211 8617 4.201812 CGTTCCATATTTGTTGTCGCTGAT 60.202 41.667 0.00 0.00 0.00 2.90
5212 8618 5.640732 GTTCCATATTTGTTGTCGCTGATT 58.359 37.500 0.00 0.00 0.00 2.57
5213 8619 5.895636 TCCATATTTGTTGTCGCTGATTT 57.104 34.783 0.00 0.00 0.00 2.17
5214 8620 6.993786 TCCATATTTGTTGTCGCTGATTTA 57.006 33.333 0.00 0.00 0.00 1.40
5215 8621 7.015226 TCCATATTTGTTGTCGCTGATTTAG 57.985 36.000 0.00 0.00 0.00 1.85
5216 8622 6.597672 TCCATATTTGTTGTCGCTGATTTAGT 59.402 34.615 0.00 0.00 0.00 2.24
5217 8623 7.766738 TCCATATTTGTTGTCGCTGATTTAGTA 59.233 33.333 0.00 0.00 0.00 1.82
5218 8624 7.850982 CCATATTTGTTGTCGCTGATTTAGTAC 59.149 37.037 0.00 0.00 0.00 2.73
5219 8625 6.795098 ATTTGTTGTCGCTGATTTAGTACA 57.205 33.333 0.00 0.00 0.00 2.90
5220 8626 6.606234 TTTGTTGTCGCTGATTTAGTACAA 57.394 33.333 0.00 0.00 34.31 2.41
5221 8627 5.585500 TGTTGTCGCTGATTTAGTACAAC 57.415 39.130 15.61 15.61 45.50 3.32
5222 8628 5.294356 TGTTGTCGCTGATTTAGTACAACT 58.706 37.500 19.61 0.00 45.50 3.16
5223 8629 5.756347 TGTTGTCGCTGATTTAGTACAACTT 59.244 36.000 19.61 0.00 45.50 2.66
5224 8630 6.259167 TGTTGTCGCTGATTTAGTACAACTTT 59.741 34.615 19.61 0.00 45.50 2.66
5225 8631 6.854496 TGTCGCTGATTTAGTACAACTTTT 57.146 33.333 0.00 0.00 0.00 2.27
5226 8632 7.254227 TGTCGCTGATTTAGTACAACTTTTT 57.746 32.000 0.00 0.00 0.00 1.94
5227 8633 8.367943 TGTCGCTGATTTAGTACAACTTTTTA 57.632 30.769 0.00 0.00 0.00 1.52
5228 8634 8.277713 TGTCGCTGATTTAGTACAACTTTTTAC 58.722 33.333 0.00 0.00 0.00 2.01
5229 8635 8.493547 GTCGCTGATTTAGTACAACTTTTTACT 58.506 33.333 0.00 0.00 33.11 2.24
5230 8636 9.695526 TCGCTGATTTAGTACAACTTTTTACTA 57.304 29.630 0.00 0.00 30.97 1.82
5239 8645 8.597662 AGTACAACTTTTTACTAAATCAGCGA 57.402 30.769 0.00 0.00 0.00 4.93
5240 8646 8.493547 AGTACAACTTTTTACTAAATCAGCGAC 58.506 33.333 0.00 0.00 0.00 5.19
5241 8647 7.254227 ACAACTTTTTACTAAATCAGCGACA 57.746 32.000 0.00 0.00 0.00 4.35
5242 8648 7.699566 ACAACTTTTTACTAAATCAGCGACAA 58.300 30.769 0.00 0.00 0.00 3.18
5243 8649 7.642586 ACAACTTTTTACTAAATCAGCGACAAC 59.357 33.333 0.00 0.00 0.00 3.32
5244 8650 7.492352 ACTTTTTACTAAATCAGCGACAACT 57.508 32.000 0.00 0.00 0.00 3.16
5245 8651 8.597662 ACTTTTTACTAAATCAGCGACAACTA 57.402 30.769 0.00 0.00 0.00 2.24
5246 8652 9.048446 ACTTTTTACTAAATCAGCGACAACTAA 57.952 29.630 0.00 0.00 0.00 2.24
5251 8657 7.715265 ACTAAATCAGCGACAACTAATATGG 57.285 36.000 0.00 0.00 0.00 2.74
5252 8658 7.497595 ACTAAATCAGCGACAACTAATATGGA 58.502 34.615 0.00 0.00 0.00 3.41
5253 8659 7.985184 ACTAAATCAGCGACAACTAATATGGAA 59.015 33.333 0.00 0.00 0.00 3.53
5254 8660 7.807977 AAATCAGCGACAACTAATATGGAAT 57.192 32.000 0.00 0.00 0.00 3.01
5255 8661 6.791887 ATCAGCGACAACTAATATGGAATG 57.208 37.500 0.00 0.00 0.00 2.67
5256 8662 5.056480 TCAGCGACAACTAATATGGAATGG 58.944 41.667 0.00 0.00 0.00 3.16
5257 8663 5.056480 CAGCGACAACTAATATGGAATGGA 58.944 41.667 0.00 0.00 0.00 3.41
5258 8664 5.178252 CAGCGACAACTAATATGGAATGGAG 59.822 44.000 0.00 0.00 0.00 3.86
5259 8665 4.452455 GCGACAACTAATATGGAATGGAGG 59.548 45.833 0.00 0.00 0.00 4.30
5260 8666 4.997395 CGACAACTAATATGGAATGGAGGG 59.003 45.833 0.00 0.00 0.00 4.30
5261 8667 5.221641 CGACAACTAATATGGAATGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
5262 8668 6.192970 ACAACTAATATGGAATGGAGGGAG 57.807 41.667 0.00 0.00 0.00 4.30
5263 8669 5.672194 ACAACTAATATGGAATGGAGGGAGT 59.328 40.000 0.00 0.00 0.00 3.85
5264 8670 6.849697 ACAACTAATATGGAATGGAGGGAGTA 59.150 38.462 0.00 0.00 0.00 2.59
5265 8671 7.016661 ACAACTAATATGGAATGGAGGGAGTAG 59.983 40.741 0.00 0.00 0.00 2.57
5266 8672 4.917906 AATATGGAATGGAGGGAGTAGC 57.082 45.455 0.00 0.00 0.00 3.58
5267 8673 2.503869 ATGGAATGGAGGGAGTAGCT 57.496 50.000 0.00 0.00 0.00 3.32
5268 8674 2.270434 TGGAATGGAGGGAGTAGCTT 57.730 50.000 0.00 0.00 0.00 3.74
5269 8675 2.562296 TGGAATGGAGGGAGTAGCTTT 58.438 47.619 0.00 0.00 0.00 3.51
5270 8676 2.919602 TGGAATGGAGGGAGTAGCTTTT 59.080 45.455 0.00 0.00 0.00 2.27
5271 8677 4.108570 TGGAATGGAGGGAGTAGCTTTTA 58.891 43.478 0.00 0.00 0.00 1.52
5272 8678 4.726825 TGGAATGGAGGGAGTAGCTTTTAT 59.273 41.667 0.00 0.00 0.00 1.40
5273 8679 5.908831 TGGAATGGAGGGAGTAGCTTTTATA 59.091 40.000 0.00 0.00 0.00 0.98
5274 8680 6.562608 TGGAATGGAGGGAGTAGCTTTTATAT 59.437 38.462 0.00 0.00 0.00 0.86
5275 8681 7.737607 TGGAATGGAGGGAGTAGCTTTTATATA 59.262 37.037 0.00 0.00 0.00 0.86
5276 8682 8.261522 GGAATGGAGGGAGTAGCTTTTATATAG 58.738 40.741 0.00 0.00 0.00 1.31
5277 8683 8.743636 AATGGAGGGAGTAGCTTTTATATAGT 57.256 34.615 0.00 0.00 0.00 2.12
5278 8684 9.839185 AATGGAGGGAGTAGCTTTTATATAGTA 57.161 33.333 0.00 0.00 0.00 1.82
5280 8686 9.839185 TGGAGGGAGTAGCTTTTATATAGTATT 57.161 33.333 0.00 0.00 0.00 1.89
5306 8712 9.230122 TGATTCTGTTGTATTTTGCTCAGAATA 57.770 29.630 15.05 5.19 45.94 1.75
5307 8713 9.495754 GATTCTGTTGTATTTTGCTCAGAATAC 57.504 33.333 15.05 13.30 45.94 1.89
5311 8717 6.425417 TGTTGTATTTTGCTCAGAATACGTCA 59.575 34.615 14.51 13.03 39.71 4.35
5312 8718 6.403333 TGTATTTTGCTCAGAATACGTCAC 57.597 37.500 14.51 0.00 39.71 3.67
5315 8721 4.725556 TTTGCTCAGAATACGTCACAAC 57.274 40.909 0.00 0.00 0.00 3.32
5335 8742 4.015872 ACTCATTTGTCCCGAAGCTTTA 57.984 40.909 0.00 0.00 0.00 1.85
5349 8756 7.990886 TCCCGAAGCTTTAAATGTGAGTATTAT 59.009 33.333 0.00 0.00 0.00 1.28
5350 8757 8.070171 CCCGAAGCTTTAAATGTGAGTATTATG 58.930 37.037 0.00 0.00 0.00 1.90
5351 8758 7.587757 CCGAAGCTTTAAATGTGAGTATTATGC 59.412 37.037 0.00 0.00 0.00 3.14
5360 8767 8.613060 AAATGTGAGTATTATGCTAGACCATG 57.387 34.615 0.00 0.00 0.00 3.66
5361 8768 6.731292 TGTGAGTATTATGCTAGACCATGT 57.269 37.500 0.00 0.00 0.00 3.21
5373 8782 4.561326 GCTAGACCATGTTTGTTGCCAAAT 60.561 41.667 0.00 0.00 42.26 2.32
5374 8783 4.420522 AGACCATGTTTGTTGCCAAATT 57.579 36.364 0.00 0.00 42.26 1.82
5375 8784 4.779696 AGACCATGTTTGTTGCCAAATTT 58.220 34.783 0.00 0.00 42.26 1.82
5423 8832 2.909504 TTTTTCCCAATCCGGATCCA 57.090 45.000 19.43 0.00 36.56 3.41
5429 8838 2.202878 AATCCGGATCCACACGCG 60.203 61.111 19.43 3.53 0.00 6.01
5455 8864 3.192633 AGGATCACCGTTGTATTTTTGGC 59.807 43.478 0.00 0.00 41.83 4.52
5461 8870 5.241949 TCACCGTTGTATTTTTGGCAGTTAT 59.758 36.000 0.00 0.00 0.00 1.89
5536 8945 7.672983 ATGGAAGTAATATTATGAGGTTGCG 57.327 36.000 0.00 0.00 0.00 4.85
5548 8957 1.065551 GAGGTTGCGCTGACTGTTTTT 59.934 47.619 9.73 0.00 0.00 1.94
5594 9003 5.124297 TGTTGCTCAACATCATAAGGTCATG 59.876 40.000 11.03 0.00 45.42 3.07
5597 9006 3.205338 TCAACATCATAAGGTCATGCCG 58.795 45.455 0.00 0.00 43.70 5.69
5629 9038 7.318893 TGATTACTGAGCTAGCATCATGTATC 58.681 38.462 18.83 16.62 29.01 2.24
5652 9061 5.006261 TCAGTTGACACACTTGTTTACATCG 59.994 40.000 0.00 0.00 35.47 3.84
5656 9065 3.947626 ACACACTTGTTTACATCGTTGC 58.052 40.909 0.00 0.00 28.43 4.17
5657 9067 2.964123 CACACTTGTTTACATCGTTGCG 59.036 45.455 0.00 0.00 0.00 4.85
5682 9092 7.360607 CGTGTTTAACCTCGGAAGTTTATTCAT 60.361 37.037 0.00 0.00 0.00 2.57
5761 9173 8.094548 ACTTTTTATATTGGCCAGTTTTCTTCC 58.905 33.333 5.89 0.00 0.00 3.46
5762 9174 7.546250 TTTTATATTGGCCAGTTTTCTTCCA 57.454 32.000 5.89 0.00 0.00 3.53
5763 9175 6.524101 TTATATTGGCCAGTTTTCTTCCAC 57.476 37.500 5.89 0.00 32.24 4.02
5764 9176 2.151502 TTGGCCAGTTTTCTTCCACA 57.848 45.000 5.11 0.00 32.24 4.17
5765 9177 1.691196 TGGCCAGTTTTCTTCCACAG 58.309 50.000 0.00 0.00 0.00 3.66
5797 9219 5.445964 AGTGAGTTCATTTGGTTTAGGTGT 58.554 37.500 0.00 0.00 0.00 4.16
5803 9225 8.110860 AGTTCATTTGGTTTAGGTGTTCTATG 57.889 34.615 0.00 0.00 0.00 2.23
5977 9400 7.656412 TGAGATAGTGATGTATCTTGAAGCTC 58.344 38.462 0.00 0.00 39.44 4.09
6129 9552 7.922278 TGCTTGAATTTGGCTTGTTATCATATC 59.078 33.333 0.00 0.00 0.00 1.63
6170 9593 7.254932 CGAAAGAACTTTCTGTCTTCTCCATTT 60.255 37.037 20.14 0.00 44.93 2.32
6262 9686 5.239359 TGTTTAGATCATGAATGTGCAGC 57.761 39.130 0.00 0.00 0.00 5.25
6294 9718 5.072040 GTTTTTGACCAATGATAGGGTGG 57.928 43.478 0.00 0.00 37.57 4.61
6295 9719 3.380471 TTTGACCAATGATAGGGTGGG 57.620 47.619 0.00 0.00 37.57 4.61
6296 9720 1.979809 TGACCAATGATAGGGTGGGT 58.020 50.000 0.00 0.00 37.57 4.51
6367 9791 2.346847 CGTGTGTTGCTCTCTAATGCTC 59.653 50.000 0.00 0.00 0.00 4.26
6591 10015 0.036577 ATCTTTCAGCACAGCTCGCT 60.037 50.000 1.16 1.16 41.47 4.93
6672 10096 6.624423 GCTGTTGTCTATTCACATTTCTGCAT 60.624 38.462 0.00 0.00 0.00 3.96
6717 10141 0.548031 CTATGGCTGCAAGAAGGGGA 59.452 55.000 0.50 0.00 34.07 4.81
6725 10149 1.305623 CAAGAAGGGGAGGCTGCAT 59.694 57.895 8.68 0.00 0.00 3.96
6854 10278 4.341783 ACTGGGCTGTGGAGCTGC 62.342 66.667 0.00 0.00 45.44 5.25
6891 10315 2.028112 TCTTGTAGTAGTTGCCAGGCTG 60.028 50.000 14.15 7.75 0.00 4.85
6916 10340 3.429410 GGTGCCTCAGAAACCAATAATGC 60.429 47.826 0.00 0.00 33.94 3.56
6956 10380 3.101437 TCAGGCCTAAACTGGAACGATA 58.899 45.455 3.98 0.00 36.62 2.92
7027 10451 7.023575 GCTAGTTTGTGGTTGTTGATGAATAG 58.976 38.462 0.00 0.00 0.00 1.73
7036 10460 7.168302 GTGGTTGTTGATGAATAGTATCGAGAG 59.832 40.741 0.00 0.00 0.00 3.20
7056 10480 6.332735 AGAGCCAGTTATTTGTTTCCTTTC 57.667 37.500 0.00 0.00 0.00 2.62
7057 10481 6.071320 AGAGCCAGTTATTTGTTTCCTTTCT 58.929 36.000 0.00 0.00 0.00 2.52
7097 10521 9.941664 GTTCACAAATATAAGATGTTCTGGATG 57.058 33.333 0.00 0.00 0.00 3.51
7100 10524 9.941664 CACAAATATAAGATGTTCTGGATGTTC 57.058 33.333 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.723309 AGTATTTGGGCTTCATCCAGATC 58.277 43.478 0.00 0.00 35.48 2.75
4 5 4.803329 AGTATTTGGGCTTCATCCAGAT 57.197 40.909 0.00 0.00 35.48 2.90
45 47 1.286501 CATTCATGCATGCACCTTGC 58.713 50.000 25.37 3.77 45.29 4.01
124 126 1.184322 TGCAACAACGGGCATGGATT 61.184 50.000 0.00 0.00 34.58 3.01
127 129 1.373246 CTTGCAACAACGGGCATGG 60.373 57.895 0.00 0.00 40.17 3.66
176 178 2.045045 TGCCTAGCATGTGGTGGC 60.045 61.111 14.48 14.48 38.91 5.01
182 184 1.544982 GCATGGATCTGCCTAGCATGT 60.545 52.381 0.00 0.00 38.13 3.21
449 519 0.609406 GCACCCAAGGAAAGAGGGAC 60.609 60.000 3.32 0.00 45.80 4.46
450 520 0.772124 AGCACCCAAGGAAAGAGGGA 60.772 55.000 3.32 0.00 45.80 4.20
452 522 2.001076 AAAGCACCCAAGGAAAGAGG 57.999 50.000 0.00 0.00 0.00 3.69
453 523 3.005155 CAGAAAAGCACCCAAGGAAAGAG 59.995 47.826 0.00 0.00 0.00 2.85
457 527 1.039856 GCAGAAAAGCACCCAAGGAA 58.960 50.000 0.00 0.00 0.00 3.36
459 529 0.752054 TTGCAGAAAAGCACCCAAGG 59.248 50.000 0.00 0.00 45.61 3.61
525 599 8.359642 AGCTCTTGTTGCAGAATGTTTTTATAA 58.640 29.630 0.00 0.00 39.31 0.98
526 600 7.885297 AGCTCTTGTTGCAGAATGTTTTTATA 58.115 30.769 0.00 0.00 39.31 0.98
527 601 6.752168 AGCTCTTGTTGCAGAATGTTTTTAT 58.248 32.000 0.00 0.00 39.31 1.40
528 602 6.147864 AGCTCTTGTTGCAGAATGTTTTTA 57.852 33.333 0.00 0.00 39.31 1.52
562 645 4.156556 TGATACAGGATTTGCTCTTGTTGC 59.843 41.667 0.00 0.00 41.05 4.17
577 660 6.507023 AGTTGCAGAAAAGTTTTGATACAGG 58.493 36.000 5.36 0.00 0.00 4.00
583 666 5.885912 AGGTCTAGTTGCAGAAAAGTTTTGA 59.114 36.000 5.36 0.00 0.00 2.69
594 677 2.208431 GCAGCATAGGTCTAGTTGCAG 58.792 52.381 6.42 0.84 37.56 4.41
637 720 4.619973 TGCCTTCACTATTGCAAAACAAG 58.380 39.130 1.71 1.45 42.87 3.16
639 722 4.321899 GGATGCCTTCACTATTGCAAAACA 60.322 41.667 1.71 0.00 37.27 2.83
640 723 4.176271 GGATGCCTTCACTATTGCAAAAC 58.824 43.478 1.71 0.00 37.27 2.43
641 724 3.195396 GGGATGCCTTCACTATTGCAAAA 59.805 43.478 1.71 0.00 37.27 2.44
642 725 2.760092 GGGATGCCTTCACTATTGCAAA 59.240 45.455 1.71 0.00 37.27 3.68
644 727 1.565759 AGGGATGCCTTCACTATTGCA 59.434 47.619 0.00 0.00 35.87 4.08
645 728 2.225467 GAGGGATGCCTTCACTATTGC 58.775 52.381 7.42 0.00 38.59 3.56
646 729 3.565764 TGAGGGATGCCTTCACTATTG 57.434 47.619 7.42 0.00 38.59 1.90
647 730 3.073650 GGATGAGGGATGCCTTCACTATT 59.926 47.826 7.42 0.00 42.29 1.73
648 731 2.641815 GGATGAGGGATGCCTTCACTAT 59.358 50.000 7.42 0.00 42.29 2.12
649 732 2.050144 GGATGAGGGATGCCTTCACTA 58.950 52.381 7.42 0.00 42.29 2.74
650 733 0.842635 GGATGAGGGATGCCTTCACT 59.157 55.000 7.42 0.00 42.29 3.41
651 734 0.533755 CGGATGAGGGATGCCTTCAC 60.534 60.000 7.42 1.56 42.29 3.18
653 736 1.001406 CTACGGATGAGGGATGCCTTC 59.999 57.143 7.42 1.12 0.00 3.46
654 737 1.051812 CTACGGATGAGGGATGCCTT 58.948 55.000 7.42 0.00 0.00 4.35
656 739 1.205893 GATCTACGGATGAGGGATGCC 59.794 57.143 0.00 0.00 31.46 4.40
657 740 1.205893 GGATCTACGGATGAGGGATGC 59.794 57.143 0.00 0.00 31.46 3.91
660 743 0.769247 TCGGATCTACGGATGAGGGA 59.231 55.000 0.00 0.00 31.46 4.20
661 744 0.882474 GTCGGATCTACGGATGAGGG 59.118 60.000 0.00 0.00 31.46 4.30
662 745 0.517755 CGTCGGATCTACGGATGAGG 59.482 60.000 11.72 0.00 37.12 3.86
669 752 2.248724 CGAGCCGTCGGATCTACG 59.751 66.667 25.73 11.16 42.87 3.51
670 753 2.051166 GCGAGCCGTCGGATCTAC 60.051 66.667 25.73 14.77 46.91 2.59
671 754 3.646976 CGCGAGCCGTCGGATCTA 61.647 66.667 25.73 0.00 46.91 1.98
673 756 3.825833 AATCGCGAGCCGTCGGATC 62.826 63.158 19.59 19.59 46.91 3.36
674 757 2.901051 AAAATCGCGAGCCGTCGGAT 62.901 55.000 17.49 9.33 46.91 4.18
675 758 3.636313 AAAATCGCGAGCCGTCGGA 62.636 57.895 17.49 0.00 46.91 4.55
676 759 3.186047 AAAATCGCGAGCCGTCGG 61.186 61.111 16.66 6.99 46.91 4.79
678 761 2.276680 GCAAAATCGCGAGCCGTC 60.277 61.111 16.66 0.00 38.35 4.79
690 773 7.201688 GCTGAACTTTTTAAAGGATTGGCAAAA 60.202 33.333 3.01 0.00 40.31 2.44
693 776 5.296748 GCTGAACTTTTTAAAGGATTGGCA 58.703 37.500 7.12 0.00 40.31 4.92
701 784 3.643159 AGCCGGCTGAACTTTTTAAAG 57.357 42.857 32.33 0.80 41.73 1.85
755 838 9.942850 TCACGATGTATACATTGGATCAAATAT 57.057 29.630 28.84 8.95 41.09 1.28
766 849 5.050490 GTGCCTTCTCACGATGTATACATT 58.950 41.667 19.19 1.98 36.57 2.71
768 851 4.041740 GTGCCTTCTCACGATGTATACA 57.958 45.455 8.27 8.27 0.00 2.29
797 880 4.020543 GGAGCCCGTATCAGATCTAATCT 58.979 47.826 0.00 0.00 41.15 2.40
803 886 2.910688 TTTGGAGCCCGTATCAGATC 57.089 50.000 0.00 0.00 0.00 2.75
842 926 0.753262 TCTTCCTCGATGGCTTAGGC 59.247 55.000 0.00 0.00 35.26 3.93
843 927 3.543680 TTTCTTCCTCGATGGCTTAGG 57.456 47.619 0.00 0.00 35.26 2.69
899 983 2.734670 TGCTGTGTGTACGTGTAGAAC 58.265 47.619 0.00 0.00 0.00 3.01
900 984 3.377439 CTTGCTGTGTGTACGTGTAGAA 58.623 45.455 0.00 0.00 0.00 2.10
901 985 2.860971 GCTTGCTGTGTGTACGTGTAGA 60.861 50.000 0.00 0.00 0.00 2.59
1101 1522 3.462678 GAGGTGGGAGAGGACGGC 61.463 72.222 0.00 0.00 0.00 5.68
1102 1523 3.141488 CGAGGTGGGAGAGGACGG 61.141 72.222 0.00 0.00 0.00 4.79
1103 1524 3.827898 GCGAGGTGGGAGAGGACG 61.828 72.222 0.00 0.00 0.00 4.79
1104 1525 2.363147 AGCGAGGTGGGAGAGGAC 60.363 66.667 0.00 0.00 0.00 3.85
1105 1526 2.043852 GAGCGAGGTGGGAGAGGA 60.044 66.667 0.00 0.00 0.00 3.71
1106 1527 3.151022 GGAGCGAGGTGGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
1107 1528 2.043450 AGGAGCGAGGTGGGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
1108 1529 2.043852 GAGGAGCGAGGTGGGAGA 60.044 66.667 0.00 0.00 0.00 3.71
1109 1530 3.151022 GGAGGAGCGAGGTGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
1110 1531 3.663815 GAGGAGGAGCGAGGTGGGA 62.664 68.421 0.00 0.00 0.00 4.37
1111 1532 3.151022 GAGGAGGAGCGAGGTGGG 61.151 72.222 0.00 0.00 0.00 4.61
1112 1533 3.522731 CGAGGAGGAGCGAGGTGG 61.523 72.222 0.00 0.00 0.00 4.61
1113 1534 4.200283 GCGAGGAGGAGCGAGGTG 62.200 72.222 0.00 0.00 0.00 4.00
1951 2372 4.193334 TCGAGCTGGATGACCGCG 62.193 66.667 0.00 0.00 39.38 6.46
2076 2497 4.148825 CGGCACCCTCCTTCTCCG 62.149 72.222 0.00 0.00 0.00 4.63
2100 2533 2.555123 CGCAAGCCCTTCTTTGCTA 58.445 52.632 7.49 0.00 36.66 3.49
2118 2551 2.699954 TCAGAATCCCGTTCTTCTTGC 58.300 47.619 0.00 0.00 44.80 4.01
2268 2701 6.183360 CGCCTAGTTGTAGTTTTTAGTGCTAC 60.183 42.308 0.00 0.00 36.54 3.58
2383 3271 0.898320 ATCCGAGGTGAACACTCCAG 59.102 55.000 4.96 0.00 0.00 3.86
2403 3291 8.523915 TCTGGCACAATTACATTATCTTGAAT 57.476 30.769 0.00 0.00 38.70 2.57
2414 3302 4.661222 TCATTTCCTCTGGCACAATTACA 58.339 39.130 0.00 0.00 38.70 2.41
2419 3307 3.438216 TCATCATTTCCTCTGGCACAA 57.562 42.857 0.00 0.00 38.70 3.33
2428 3316 6.207417 AGACATTTCGTGTTTCATCATTTCCT 59.793 34.615 0.00 0.00 42.36 3.36
2444 3332 7.025365 ACAATGTGAATTGATCAGACATTTCG 58.975 34.615 16.00 11.34 39.19 3.46
2509 3403 2.857748 GGCCACGCAATTAAACTAATGC 59.142 45.455 0.00 0.00 0.00 3.56
2634 3528 7.996644 TGTAAATAGTTTGCTTATAAGAGGGGG 59.003 37.037 16.85 0.00 0.00 5.40
2635 3529 8.974060 TGTAAATAGTTTGCTTATAAGAGGGG 57.026 34.615 16.85 0.00 0.00 4.79
2677 3571 5.272283 TGGGTCCGAGATAACATAAGAAC 57.728 43.478 0.00 0.00 0.00 3.01
2753 3648 1.364626 CGCACCTGTTGGAGATGCTC 61.365 60.000 0.00 0.00 32.59 4.26
2754 3649 1.376424 CGCACCTGTTGGAGATGCT 60.376 57.895 0.00 0.00 32.59 3.79
2755 3650 3.044059 GCGCACCTGTTGGAGATGC 62.044 63.158 0.30 0.00 37.04 3.91
2756 3651 1.236616 TTGCGCACCTGTTGGAGATG 61.237 55.000 11.12 0.00 37.04 2.90
2757 3652 1.073025 TTGCGCACCTGTTGGAGAT 59.927 52.632 11.12 0.00 37.04 2.75
2758 3653 1.891919 GTTGCGCACCTGTTGGAGA 60.892 57.895 11.12 0.00 37.04 3.71
2759 3654 2.639286 GTTGCGCACCTGTTGGAG 59.361 61.111 11.12 0.00 37.04 3.86
2760 3655 2.904866 GGTTGCGCACCTGTTGGA 60.905 61.111 11.12 0.00 43.29 3.53
2781 3676 1.056869 AAAAATGTTTTAGCGCGCCG 58.943 45.000 30.33 0.00 0.00 6.46
2782 3677 2.981140 TGTAAAAATGTTTTAGCGCGCC 59.019 40.909 30.33 12.97 0.00 6.53
2783 3678 3.479707 GCTGTAAAAATGTTTTAGCGCGC 60.480 43.478 26.66 26.66 30.82 6.86
2784 3679 3.240899 CGCTGTAAAAATGTTTTAGCGCG 60.241 43.478 19.91 0.00 44.55 6.86
2785 3680 4.212279 CGCTGTAAAAATGTTTTAGCGC 57.788 40.909 19.91 0.00 44.55 5.92
2787 3682 3.058913 CCGCGCTGTAAAAATGTTTTAGC 59.941 43.478 5.56 7.06 34.71 3.09
2788 3683 4.468643 TCCGCGCTGTAAAAATGTTTTAG 58.531 39.130 5.56 0.00 0.00 1.85
2789 3684 4.485024 TCCGCGCTGTAAAAATGTTTTA 57.515 36.364 5.56 0.00 0.00 1.52
2790 3685 3.357166 TCCGCGCTGTAAAAATGTTTT 57.643 38.095 5.56 0.00 0.00 2.43
2791 3686 3.357166 TTCCGCGCTGTAAAAATGTTT 57.643 38.095 5.56 0.00 0.00 2.83
2792 3687 3.357166 TTTCCGCGCTGTAAAAATGTT 57.643 38.095 5.56 0.00 0.00 2.71
2793 3688 3.569250 ATTTCCGCGCTGTAAAAATGT 57.431 38.095 5.56 0.00 0.00 2.71
2794 3689 3.482110 GCTATTTCCGCGCTGTAAAAATG 59.518 43.478 5.56 0.00 0.00 2.32
2795 3690 3.691498 GCTATTTCCGCGCTGTAAAAAT 58.309 40.909 5.56 4.08 0.00 1.82
2796 3691 2.474856 CGCTATTTCCGCGCTGTAAAAA 60.475 45.455 5.56 0.00 44.33 1.94
2797 3692 1.061421 CGCTATTTCCGCGCTGTAAAA 59.939 47.619 5.56 0.61 44.33 1.52
2798 3693 0.648441 CGCTATTTCCGCGCTGTAAA 59.352 50.000 5.56 3.33 44.33 2.01
2799 3694 2.293765 CGCTATTTCCGCGCTGTAA 58.706 52.632 5.56 0.00 44.33 2.41
2800 3695 4.006532 CGCTATTTCCGCGCTGTA 57.993 55.556 5.56 0.00 44.33 2.74
2806 3701 0.989164 GCAAAAACCGCTATTTCCGC 59.011 50.000 0.00 0.00 0.00 5.54
2807 3702 1.255767 CGCAAAAACCGCTATTTCCG 58.744 50.000 0.00 0.00 0.00 4.30
2848 3743 4.264638 ATATTTTGCCGCGGCCGC 62.265 61.111 44.42 39.82 41.09 6.53
2849 3744 2.353376 CATATTTTGCCGCGGCCG 60.353 61.111 44.42 24.05 41.09 6.13
2850 3745 2.027460 CCATATTTTGCCGCGGCC 59.973 61.111 44.42 27.83 41.09 6.13
2851 3746 2.658268 GCCATATTTTGCCGCGGC 60.658 61.111 42.35 42.35 42.35 6.53
2852 3747 2.353376 CGCCATATTTTGCCGCGG 60.353 61.111 24.05 24.05 39.20 6.46
2853 3748 3.024043 GCGCCATATTTTGCCGCG 61.024 61.111 0.00 0.00 45.35 6.46
2854 3749 3.024043 CGCGCCATATTTTGCCGC 61.024 61.111 0.00 0.00 0.00 6.53
2855 3750 3.024043 GCGCGCCATATTTTGCCG 61.024 61.111 23.24 0.00 0.00 5.69
2856 3751 3.024043 CGCGCGCCATATTTTGCC 61.024 61.111 27.72 0.00 0.00 4.52
2857 3752 3.681318 GCGCGCGCCATATTTTGC 61.681 61.111 42.83 16.79 34.56 3.68
2858 3753 3.378042 CGCGCGCGCCATATTTTG 61.378 61.111 44.64 26.55 37.98 2.44
2859 3754 3.506312 CTCGCGCGCGCCATATTTT 62.506 57.895 45.41 0.00 39.59 1.82
2860 3755 4.000557 CTCGCGCGCGCCATATTT 62.001 61.111 45.41 0.00 39.59 1.40
2887 3782 1.693083 GCTGTAAGTTAGCGTGCCCG 61.693 60.000 0.00 0.00 35.30 6.13
2888 3783 2.087344 GCTGTAAGTTAGCGTGCCC 58.913 57.895 0.00 0.00 35.30 5.36
2894 3789 2.316687 CGCGCGCTGTAAGTTAGC 59.683 61.111 30.48 0.00 37.80 3.09
2895 3790 2.316687 GCGCGCGCTGTAAGTTAG 59.683 61.111 44.38 11.16 38.26 2.34
2896 3791 3.538201 CGCGCGCGCTGTAAGTTA 61.538 61.111 45.97 0.00 39.32 2.24
2925 3820 1.693083 GCTGTAAGTTAGCGTGCCCG 61.693 60.000 0.00 0.00 35.30 6.13
2926 3821 2.087344 GCTGTAAGTTAGCGTGCCC 58.913 57.895 0.00 0.00 35.30 5.36
3045 3941 2.095263 GTGCCGTGCAATTGAACTATGT 60.095 45.455 14.73 0.00 41.47 2.29
3062 3958 3.267900 GCATGATTGCTGATGTGCC 57.732 52.632 0.00 0.00 45.77 5.01
3094 3990 4.383661 GGTTGGGTGATTTTGAACTTGGTT 60.384 41.667 0.00 0.00 0.00 3.67
3102 3998 4.026744 TGAACTTGGTTGGGTGATTTTGA 58.973 39.130 0.00 0.00 0.00 2.69
3103 3999 4.399004 TGAACTTGGTTGGGTGATTTTG 57.601 40.909 0.00 0.00 0.00 2.44
3104 4000 4.653341 TGATGAACTTGGTTGGGTGATTTT 59.347 37.500 0.00 0.00 0.00 1.82
3111 4007 3.799917 GCACTTTGATGAACTTGGTTGGG 60.800 47.826 0.00 0.00 0.00 4.12
3313 5432 4.479993 ACCTCGGCTGCTGGCATC 62.480 66.667 17.21 0.00 44.01 3.91
3314 5433 4.479993 GACCTCGGCTGCTGGCAT 62.480 66.667 17.21 0.00 44.01 4.40
3450 5986 1.229853 CCAACCCCTCCCTACACCT 60.230 63.158 0.00 0.00 0.00 4.00
3720 6274 2.817834 AGGCGCGCGATTTTAGCA 60.818 55.556 37.18 0.00 34.19 3.49
3729 6284 3.490759 ATCTCAAACAGGCGCGCG 61.491 61.111 28.44 28.44 0.00 6.86
3754 6309 9.887406 GTTTACCTCTATCGAATTTTGAACAAA 57.113 29.630 0.00 0.00 0.00 2.83
3755 6310 9.058174 TGTTTACCTCTATCGAATTTTGAACAA 57.942 29.630 0.00 0.00 0.00 2.83
3756 6311 8.610248 TGTTTACCTCTATCGAATTTTGAACA 57.390 30.769 0.00 0.00 0.00 3.18
3757 6312 9.326339 GTTGTTTACCTCTATCGAATTTTGAAC 57.674 33.333 0.00 0.00 0.00 3.18
3758 6313 9.058174 TGTTGTTTACCTCTATCGAATTTTGAA 57.942 29.630 0.00 0.00 0.00 2.69
3775 6330 7.209471 TCATGAGGTACCAAATGTTGTTTAC 57.791 36.000 15.94 0.00 0.00 2.01
3787 6343 8.139350 CACGTAACTAATTATCATGAGGTACCA 58.861 37.037 15.94 0.00 29.84 3.25
3799 6355 5.061179 GTGCCCATCCACGTAACTAATTAT 58.939 41.667 0.00 0.00 0.00 1.28
3860 6416 2.290514 ACAATGTATGTGAGCACCTGCT 60.291 45.455 0.00 0.00 44.72 4.24
3898 6462 4.021192 TCTGTCATTCACATCAGCACAGTA 60.021 41.667 0.00 0.00 33.23 2.74
3931 6495 6.456584 CGACGAAAGCTACTCAAGTACTCATA 60.457 42.308 0.00 0.00 0.00 2.15
3932 6496 5.642686 GACGAAAGCTACTCAAGTACTCAT 58.357 41.667 0.00 0.00 0.00 2.90
3955 6519 2.687566 ACCTGCCCCTAAGACCCG 60.688 66.667 0.00 0.00 0.00 5.28
4113 7513 4.911522 TCTAGAAAAGGGGTCCTTCAAGAA 59.088 41.667 0.00 0.00 43.92 2.52
4117 7517 2.572104 GCTCTAGAAAAGGGGTCCTTCA 59.428 50.000 0.00 0.00 43.92 3.02
4137 7540 3.266510 TCATTCCCAGACAGTACATGC 57.733 47.619 0.00 0.00 0.00 4.06
4138 7541 4.813161 GTGATCATTCCCAGACAGTACATG 59.187 45.833 0.00 0.00 0.00 3.21
4139 7542 4.718774 AGTGATCATTCCCAGACAGTACAT 59.281 41.667 0.00 0.00 0.00 2.29
4148 7551 2.695666 ACGTCCTAGTGATCATTCCCAG 59.304 50.000 0.00 0.00 0.00 4.45
4222 7625 3.787785 TGTAAGTTGCGTGTCTGAAAGA 58.212 40.909 0.00 0.00 43.69 2.52
4511 7915 3.244911 TGTCCTTGGAAGAAGGTTGGATC 60.245 47.826 0.00 0.00 38.55 3.36
4600 8004 1.317613 ACATGTTTTCGCAGCTTCCA 58.682 45.000 0.00 0.00 0.00 3.53
4763 8167 4.381292 CCATCTGAAACCCAAAGAATCTGC 60.381 45.833 0.00 0.00 0.00 4.26
4832 8236 6.989155 TCACCTTCACTTTTAGGAGACTTA 57.011 37.500 0.00 0.00 43.67 2.24
4850 8254 3.350992 TCCCCATCACTATCATCACCT 57.649 47.619 0.00 0.00 0.00 4.00
4852 8256 5.296151 TCTTTCCCCATCACTATCATCAC 57.704 43.478 0.00 0.00 0.00 3.06
4876 8280 3.932710 TGAGAGCTTAATGGTTGCTAACG 59.067 43.478 0.00 0.00 37.16 3.18
4913 8317 7.736031 AAAAACGAGAACAAAAGAACTAAGC 57.264 32.000 0.00 0.00 0.00 3.09
4950 8356 9.944376 ACTATGCACTTCTAAAAGATGACTAAA 57.056 29.630 0.00 0.00 36.30 1.85
4980 8386 1.133761 TGTCCCAAAAATCCACACCGA 60.134 47.619 0.00 0.00 0.00 4.69
4983 8389 2.028203 CCCATGTCCCAAAAATCCACAC 60.028 50.000 0.00 0.00 0.00 3.82
5009 8415 2.815211 GGCTGAATCGAGTGCGCA 60.815 61.111 5.66 5.66 37.46 6.09
5043 8449 7.685641 TGTTTGACACAAAGAAGTTCCAACTTT 60.686 33.333 6.16 0.00 39.94 2.66
5044 8450 6.239176 TGTTTGACACAAAGAAGTTCCAACTT 60.239 34.615 4.32 4.32 41.44 2.66
5045 8451 5.242838 TGTTTGACACAAAGAAGTTCCAACT 59.757 36.000 0.00 0.00 34.52 3.16
5047 8453 5.713792 TGTTTGACACAAAGAAGTTCCAA 57.286 34.783 0.00 0.00 29.87 3.53
5060 8466 7.275719 CTAGAGTGCTAGACTGTGTTTGACAC 61.276 46.154 4.33 4.33 45.95 3.67
5061 8467 3.384789 AGAGTGCTAGACTGTGTTTGACA 59.615 43.478 0.00 0.00 33.83 3.58
5062 8468 3.983741 AGAGTGCTAGACTGTGTTTGAC 58.016 45.455 0.00 0.00 33.83 3.18
5063 8469 4.321304 GCTAGAGTGCTAGACTGTGTTTGA 60.321 45.833 4.23 0.00 45.71 2.69
5064 8470 3.923461 GCTAGAGTGCTAGACTGTGTTTG 59.077 47.826 4.23 0.00 45.71 2.93
5070 8476 7.174080 TGAGTATTATGCTAGAGTGCTAGACTG 59.826 40.741 4.23 0.00 45.71 3.51
5090 8496 6.479660 TGTTCCGAAACTTTAAACGTGAGTAT 59.520 34.615 0.00 0.00 38.88 2.12
5093 8499 5.146482 TGTTCCGAAACTTTAAACGTGAG 57.854 39.130 0.00 0.00 36.30 3.51
5094 8500 5.738118 ATGTTCCGAAACTTTAAACGTGA 57.262 34.783 0.00 0.00 36.30 4.35
5095 8501 7.799447 TCATTATGTTCCGAAACTTTAAACGTG 59.201 33.333 0.00 0.00 36.30 4.49
5096 8502 7.863666 TCATTATGTTCCGAAACTTTAAACGT 58.136 30.769 0.00 0.00 36.30 3.99
5097 8503 8.013378 ACTCATTATGTTCCGAAACTTTAAACG 58.987 33.333 0.00 0.00 36.30 3.60
5122 8528 5.944049 TTTCGCTCAGAATACGACATAAC 57.056 39.130 0.00 0.00 38.86 1.89
5144 8550 7.540400 GGTTTTTGTAGCTGCAATTTTGTTTTT 59.460 29.630 18.31 0.00 0.00 1.94
5145 8551 7.026562 GGTTTTTGTAGCTGCAATTTTGTTTT 58.973 30.769 18.31 0.00 0.00 2.43
5146 8552 6.550843 GGTTTTTGTAGCTGCAATTTTGTTT 58.449 32.000 18.31 0.00 0.00 2.83
5147 8553 5.220567 CGGTTTTTGTAGCTGCAATTTTGTT 60.221 36.000 18.31 0.00 0.00 2.83
5148 8554 4.269844 CGGTTTTTGTAGCTGCAATTTTGT 59.730 37.500 18.31 0.00 0.00 2.83
5149 8555 4.760683 CGGTTTTTGTAGCTGCAATTTTG 58.239 39.130 18.31 4.28 0.00 2.44
5150 8556 3.247411 GCGGTTTTTGTAGCTGCAATTTT 59.753 39.130 18.31 0.00 0.00 1.82
5151 8557 2.799978 GCGGTTTTTGTAGCTGCAATTT 59.200 40.909 18.31 0.00 0.00 1.82
5152 8558 2.223923 TGCGGTTTTTGTAGCTGCAATT 60.224 40.909 18.31 0.00 0.00 2.32
5153 8559 1.339610 TGCGGTTTTTGTAGCTGCAAT 59.660 42.857 18.31 0.00 0.00 3.56
5154 8560 0.741326 TGCGGTTTTTGTAGCTGCAA 59.259 45.000 13.67 13.67 0.00 4.08
5155 8561 0.741326 TTGCGGTTTTTGTAGCTGCA 59.259 45.000 0.00 0.00 0.00 4.41
5156 8562 1.521006 GTTTGCGGTTTTTGTAGCTGC 59.479 47.619 0.00 0.00 0.00 5.25
5157 8563 2.788786 CTGTTTGCGGTTTTTGTAGCTG 59.211 45.455 0.00 0.00 0.00 4.24
5158 8564 2.425668 ACTGTTTGCGGTTTTTGTAGCT 59.574 40.909 0.00 0.00 0.00 3.32
5159 8565 2.804647 ACTGTTTGCGGTTTTTGTAGC 58.195 42.857 0.00 0.00 0.00 3.58
5160 8566 5.164606 AGTACTGTTTGCGGTTTTTGTAG 57.835 39.130 0.00 0.00 35.51 2.74
5161 8567 4.035441 GGAGTACTGTTTGCGGTTTTTGTA 59.965 41.667 0.00 0.00 35.51 2.41
5162 8568 3.181494 GGAGTACTGTTTGCGGTTTTTGT 60.181 43.478 0.00 0.00 35.51 2.83
5163 8569 3.368495 GGAGTACTGTTTGCGGTTTTTG 58.632 45.455 0.00 0.00 35.51 2.44
5164 8570 2.359848 GGGAGTACTGTTTGCGGTTTTT 59.640 45.455 0.00 0.00 35.51 1.94
5165 8571 1.951602 GGGAGTACTGTTTGCGGTTTT 59.048 47.619 0.00 0.00 35.51 2.43
5166 8572 1.142262 AGGGAGTACTGTTTGCGGTTT 59.858 47.619 0.00 0.00 35.51 3.27
5167 8573 0.763035 AGGGAGTACTGTTTGCGGTT 59.237 50.000 0.00 0.00 35.51 4.44
5168 8574 0.320697 GAGGGAGTACTGTTTGCGGT 59.679 55.000 0.00 0.00 37.98 5.68
5169 8575 0.391263 GGAGGGAGTACTGTTTGCGG 60.391 60.000 0.00 0.00 0.00 5.69
5170 8576 0.736325 CGGAGGGAGTACTGTTTGCG 60.736 60.000 0.00 0.00 0.00 4.85
5171 8577 0.320697 ACGGAGGGAGTACTGTTTGC 59.679 55.000 0.00 0.00 0.00 3.68
5172 8578 2.612221 GGAACGGAGGGAGTACTGTTTG 60.612 54.545 0.00 0.00 36.02 2.93
5173 8579 1.622312 GGAACGGAGGGAGTACTGTTT 59.378 52.381 0.00 0.00 36.02 2.83
5174 8580 1.264295 GGAACGGAGGGAGTACTGTT 58.736 55.000 0.00 0.00 38.15 3.16
5175 8581 0.113776 TGGAACGGAGGGAGTACTGT 59.886 55.000 0.00 0.00 0.00 3.55
5176 8582 1.486211 ATGGAACGGAGGGAGTACTG 58.514 55.000 0.00 0.00 0.00 2.74
5177 8583 3.614568 ATATGGAACGGAGGGAGTACT 57.385 47.619 0.00 0.00 0.00 2.73
5178 8584 4.141779 ACAAATATGGAACGGAGGGAGTAC 60.142 45.833 0.00 0.00 0.00 2.73
5179 8585 4.035112 ACAAATATGGAACGGAGGGAGTA 58.965 43.478 0.00 0.00 0.00 2.59
5180 8586 2.844348 ACAAATATGGAACGGAGGGAGT 59.156 45.455 0.00 0.00 0.00 3.85
5181 8587 3.560636 ACAAATATGGAACGGAGGGAG 57.439 47.619 0.00 0.00 0.00 4.30
5182 8588 3.009695 ACAACAAATATGGAACGGAGGGA 59.990 43.478 0.00 0.00 0.00 4.20
5183 8589 3.352648 ACAACAAATATGGAACGGAGGG 58.647 45.455 0.00 0.00 0.00 4.30
5184 8590 3.063452 CGACAACAAATATGGAACGGAGG 59.937 47.826 0.00 0.00 0.00 4.30
5185 8591 3.485216 GCGACAACAAATATGGAACGGAG 60.485 47.826 0.00 0.00 0.00 4.63
5186 8592 2.417239 GCGACAACAAATATGGAACGGA 59.583 45.455 0.00 0.00 0.00 4.69
5187 8593 2.418628 AGCGACAACAAATATGGAACGG 59.581 45.455 0.00 0.00 0.00 4.44
5188 8594 3.124466 TCAGCGACAACAAATATGGAACG 59.876 43.478 0.00 0.00 0.00 3.95
5189 8595 4.678509 TCAGCGACAACAAATATGGAAC 57.321 40.909 0.00 0.00 0.00 3.62
5190 8596 5.895636 AATCAGCGACAACAAATATGGAA 57.104 34.783 0.00 0.00 0.00 3.53
5191 8597 5.895636 AAATCAGCGACAACAAATATGGA 57.104 34.783 0.00 0.00 0.00 3.41
5192 8598 6.785191 ACTAAATCAGCGACAACAAATATGG 58.215 36.000 0.00 0.00 0.00 2.74
5193 8599 8.387354 TGTACTAAATCAGCGACAACAAATATG 58.613 33.333 0.00 0.00 0.00 1.78
5194 8600 8.487313 TGTACTAAATCAGCGACAACAAATAT 57.513 30.769 0.00 0.00 0.00 1.28
5195 8601 7.892778 TGTACTAAATCAGCGACAACAAATA 57.107 32.000 0.00 0.00 0.00 1.40
5196 8602 6.795098 TGTACTAAATCAGCGACAACAAAT 57.205 33.333 0.00 0.00 0.00 2.32
5197 8603 6.259167 AGTTGTACTAAATCAGCGACAACAAA 59.741 34.615 15.65 0.00 46.83 2.83
5198 8604 5.756347 AGTTGTACTAAATCAGCGACAACAA 59.244 36.000 15.65 0.00 46.83 2.83
5199 8605 5.294356 AGTTGTACTAAATCAGCGACAACA 58.706 37.500 15.65 0.00 46.83 3.33
5200 8606 5.840940 AGTTGTACTAAATCAGCGACAAC 57.159 39.130 7.45 7.45 45.83 3.32
5201 8607 6.854496 AAAGTTGTACTAAATCAGCGACAA 57.146 33.333 0.00 0.00 33.29 3.18
5202 8608 6.854496 AAAAGTTGTACTAAATCAGCGACA 57.146 33.333 0.00 0.00 0.00 4.35
5203 8609 8.493547 AGTAAAAAGTTGTACTAAATCAGCGAC 58.506 33.333 0.00 0.00 0.00 5.19
5204 8610 8.597662 AGTAAAAAGTTGTACTAAATCAGCGA 57.402 30.769 0.00 0.00 0.00 4.93
5213 8619 9.695526 TCGCTGATTTAGTAAAAAGTTGTACTA 57.304 29.630 0.00 0.00 32.79 1.82
5214 8620 8.493547 GTCGCTGATTTAGTAAAAAGTTGTACT 58.506 33.333 0.00 0.00 34.89 2.73
5215 8621 8.277713 TGTCGCTGATTTAGTAAAAAGTTGTAC 58.722 33.333 0.00 0.00 0.00 2.90
5216 8622 8.367943 TGTCGCTGATTTAGTAAAAAGTTGTA 57.632 30.769 0.00 0.00 0.00 2.41
5217 8623 7.254227 TGTCGCTGATTTAGTAAAAAGTTGT 57.746 32.000 0.00 0.00 0.00 3.32
5218 8624 7.855904 AGTTGTCGCTGATTTAGTAAAAAGTTG 59.144 33.333 0.00 0.00 0.00 3.16
5219 8625 7.927048 AGTTGTCGCTGATTTAGTAAAAAGTT 58.073 30.769 0.00 0.00 0.00 2.66
5220 8626 7.492352 AGTTGTCGCTGATTTAGTAAAAAGT 57.508 32.000 0.00 0.00 0.00 2.66
5225 8631 9.256477 CCATATTAGTTGTCGCTGATTTAGTAA 57.744 33.333 0.00 0.00 0.00 2.24
5226 8632 8.635328 TCCATATTAGTTGTCGCTGATTTAGTA 58.365 33.333 0.00 0.00 0.00 1.82
5227 8633 7.497595 TCCATATTAGTTGTCGCTGATTTAGT 58.502 34.615 0.00 0.00 0.00 2.24
5228 8634 7.946655 TCCATATTAGTTGTCGCTGATTTAG 57.053 36.000 0.00 0.00 0.00 1.85
5229 8635 8.773645 CATTCCATATTAGTTGTCGCTGATTTA 58.226 33.333 0.00 0.00 0.00 1.40
5230 8636 7.255242 CCATTCCATATTAGTTGTCGCTGATTT 60.255 37.037 0.00 0.00 0.00 2.17
5231 8637 6.205464 CCATTCCATATTAGTTGTCGCTGATT 59.795 38.462 0.00 0.00 0.00 2.57
5232 8638 5.702670 CCATTCCATATTAGTTGTCGCTGAT 59.297 40.000 0.00 0.00 0.00 2.90
5233 8639 5.056480 CCATTCCATATTAGTTGTCGCTGA 58.944 41.667 0.00 0.00 0.00 4.26
5234 8640 5.056480 TCCATTCCATATTAGTTGTCGCTG 58.944 41.667 0.00 0.00 0.00 5.18
5235 8641 5.290493 TCCATTCCATATTAGTTGTCGCT 57.710 39.130 0.00 0.00 0.00 4.93
5236 8642 4.452455 CCTCCATTCCATATTAGTTGTCGC 59.548 45.833 0.00 0.00 0.00 5.19
5237 8643 4.997395 CCCTCCATTCCATATTAGTTGTCG 59.003 45.833 0.00 0.00 0.00 4.35
5238 8644 6.183361 ACTCCCTCCATTCCATATTAGTTGTC 60.183 42.308 0.00 0.00 0.00 3.18
5239 8645 5.672194 ACTCCCTCCATTCCATATTAGTTGT 59.328 40.000 0.00 0.00 0.00 3.32
5240 8646 6.192970 ACTCCCTCCATTCCATATTAGTTG 57.807 41.667 0.00 0.00 0.00 3.16
5241 8647 6.013293 GCTACTCCCTCCATTCCATATTAGTT 60.013 42.308 0.00 0.00 0.00 2.24
5242 8648 5.485708 GCTACTCCCTCCATTCCATATTAGT 59.514 44.000 0.00 0.00 0.00 2.24
5243 8649 5.723887 AGCTACTCCCTCCATTCCATATTAG 59.276 44.000 0.00 0.00 0.00 1.73
5244 8650 5.665701 AGCTACTCCCTCCATTCCATATTA 58.334 41.667 0.00 0.00 0.00 0.98
5245 8651 4.507342 AGCTACTCCCTCCATTCCATATT 58.493 43.478 0.00 0.00 0.00 1.28
5246 8652 4.153371 AGCTACTCCCTCCATTCCATAT 57.847 45.455 0.00 0.00 0.00 1.78
5247 8653 3.637821 AGCTACTCCCTCCATTCCATA 57.362 47.619 0.00 0.00 0.00 2.74
5248 8654 2.503869 AGCTACTCCCTCCATTCCAT 57.496 50.000 0.00 0.00 0.00 3.41
5249 8655 2.270434 AAGCTACTCCCTCCATTCCA 57.730 50.000 0.00 0.00 0.00 3.53
5250 8656 3.653835 AAAAGCTACTCCCTCCATTCC 57.346 47.619 0.00 0.00 0.00 3.01
5251 8657 8.817876 ACTATATAAAAGCTACTCCCTCCATTC 58.182 37.037 0.00 0.00 0.00 2.67
5252 8658 8.743636 ACTATATAAAAGCTACTCCCTCCATT 57.256 34.615 0.00 0.00 0.00 3.16
5254 8660 9.839185 AATACTATATAAAAGCTACTCCCTCCA 57.161 33.333 0.00 0.00 0.00 3.86
5275 8681 9.013229 TGAGCAAAATACAACAGAATCAATACT 57.987 29.630 0.00 0.00 0.00 2.12
5276 8682 9.282247 CTGAGCAAAATACAACAGAATCAATAC 57.718 33.333 0.00 0.00 0.00 1.89
5277 8683 9.230122 TCTGAGCAAAATACAACAGAATCAATA 57.770 29.630 0.00 0.00 32.66 1.90
5278 8684 8.114331 TCTGAGCAAAATACAACAGAATCAAT 57.886 30.769 0.00 0.00 32.66 2.57
5279 8685 7.509141 TCTGAGCAAAATACAACAGAATCAA 57.491 32.000 0.00 0.00 32.66 2.57
5280 8686 7.509141 TTCTGAGCAAAATACAACAGAATCA 57.491 32.000 0.00 0.00 38.73 2.57
5281 8687 9.495754 GTATTCTGAGCAAAATACAACAGAATC 57.504 33.333 18.77 10.38 45.55 2.52
5283 8689 7.172532 ACGTATTCTGAGCAAAATACAACAGAA 59.827 33.333 0.00 0.00 44.43 3.02
5284 8690 6.649141 ACGTATTCTGAGCAAAATACAACAGA 59.351 34.615 7.29 0.00 37.94 3.41
5285 8691 6.831769 ACGTATTCTGAGCAAAATACAACAG 58.168 36.000 7.29 0.00 37.94 3.16
5286 8692 6.425417 TGACGTATTCTGAGCAAAATACAACA 59.575 34.615 7.29 4.16 37.94 3.33
5287 8693 6.736853 GTGACGTATTCTGAGCAAAATACAAC 59.263 38.462 7.29 2.19 37.94 3.32
5288 8694 6.425417 TGTGACGTATTCTGAGCAAAATACAA 59.575 34.615 7.29 0.00 37.94 2.41
5290 8696 6.403333 TGTGACGTATTCTGAGCAAAATAC 57.597 37.500 0.00 0.00 35.80 1.89
5292 8698 5.470098 AGTTGTGACGTATTCTGAGCAAAAT 59.530 36.000 0.00 0.00 0.00 1.82
5294 8700 4.377021 AGTTGTGACGTATTCTGAGCAAA 58.623 39.130 0.00 0.00 0.00 3.68
5296 8702 3.005367 TGAGTTGTGACGTATTCTGAGCA 59.995 43.478 0.00 0.00 0.00 4.26
5312 8718 2.154462 AGCTTCGGGACAAATGAGTTG 58.846 47.619 0.00 0.00 43.43 3.16
5315 8721 5.371115 TTTAAAGCTTCGGGACAAATGAG 57.629 39.130 0.00 0.00 0.00 2.90
5335 8742 8.213679 ACATGGTCTAGCATAATACTCACATTT 58.786 33.333 0.00 0.00 0.00 2.32
5349 8756 1.885887 GGCAACAAACATGGTCTAGCA 59.114 47.619 0.00 0.00 0.00 3.49
5350 8757 2.636768 GGCAACAAACATGGTCTAGC 57.363 50.000 0.00 0.00 0.00 3.42
5409 8818 1.523711 CGTGTGGATCCGGATTGGG 60.524 63.158 20.22 1.53 38.76 4.12
5410 8819 2.180204 GCGTGTGGATCCGGATTGG 61.180 63.158 20.22 5.75 40.09 3.16
5423 8832 4.760047 GTGATCCTGGGCGCGTGT 62.760 66.667 8.43 0.00 0.00 4.49
5429 8838 0.180406 ATACAACGGTGATCCTGGGC 59.820 55.000 7.88 0.00 0.00 5.36
5548 8957 9.994432 CAACAGCAAAACCAATTACAATTAAAA 57.006 25.926 0.00 0.00 0.00 1.52
5553 8962 5.367302 AGCAACAGCAAAACCAATTACAAT 58.633 33.333 0.00 0.00 0.00 2.71
5594 9003 2.280628 CTCAGTAATCAAAGGTCCGGC 58.719 52.381 0.00 0.00 0.00 6.13
5597 9006 4.123506 GCTAGCTCAGTAATCAAAGGTCC 58.876 47.826 7.70 0.00 0.00 4.46
5629 9038 5.197549 CGATGTAAACAAGTGTGTCAACTG 58.802 41.667 0.00 0.00 36.80 3.16
5652 9061 1.219646 TCCGAGGTTAAACACGCAAC 58.780 50.000 4.69 0.00 0.00 4.17
5656 9065 5.851047 ATAAACTTCCGAGGTTAAACACG 57.149 39.130 3.12 3.12 38.49 4.49
5657 9067 7.193377 TGAATAAACTTCCGAGGTTAAACAC 57.807 36.000 0.00 0.00 38.49 3.32
5682 9092 9.826574 AACAATTACTGTGTCTTTGAAGTACTA 57.173 29.630 0.00 0.00 38.67 1.82
5761 9173 4.191544 TGAACTCACTTCCTTTGTCTGTG 58.808 43.478 0.00 0.00 0.00 3.66
5762 9174 4.487714 TGAACTCACTTCCTTTGTCTGT 57.512 40.909 0.00 0.00 0.00 3.41
5763 9175 6.204359 CAAATGAACTCACTTCCTTTGTCTG 58.796 40.000 0.00 0.00 38.61 3.51
5764 9176 5.300286 CCAAATGAACTCACTTCCTTTGTCT 59.700 40.000 8.86 0.00 40.35 3.41
5765 9177 5.067805 ACCAAATGAACTCACTTCCTTTGTC 59.932 40.000 8.86 0.00 40.35 3.18
5819 9242 6.044871 CCCTGGAAAAGAGGGTTATGATCTAT 59.955 42.308 0.00 0.00 44.85 1.98
5920 9343 3.933861 AGGATAAGCACGGAATCCTTT 57.066 42.857 0.00 0.00 45.82 3.11
5977 9400 6.635641 CAGATTTATCGCAATCCAGAATGTTG 59.364 38.462 0.00 0.00 34.15 3.33
6129 9552 4.114058 TCTTTCGATAGGTTTACCACGG 57.886 45.455 2.93 0.00 38.89 4.94
6170 9593 5.867903 AGACCAAACCAATGAATGTGAAA 57.132 34.783 0.00 0.00 0.00 2.69
6211 9635 5.491070 TGTGTCTCCACCTGATATCAAAAG 58.509 41.667 6.90 1.43 41.09 2.27
6287 9711 0.548197 ATCGAACCCAACCCACCCTA 60.548 55.000 0.00 0.00 0.00 3.53
6292 9716 3.722908 TTAATCATCGAACCCAACCCA 57.277 42.857 0.00 0.00 0.00 4.51
6293 9717 5.617252 TCTATTAATCATCGAACCCAACCC 58.383 41.667 0.00 0.00 0.00 4.11
6294 9718 6.348540 GCATCTATTAATCATCGAACCCAACC 60.349 42.308 0.00 0.00 0.00 3.77
6295 9719 6.348540 GGCATCTATTAATCATCGAACCCAAC 60.349 42.308 0.00 0.00 0.00 3.77
6296 9720 5.705441 GGCATCTATTAATCATCGAACCCAA 59.295 40.000 0.00 0.00 0.00 4.12
6591 10015 4.397481 CATCACCTGCTCAGAAGTATCA 57.603 45.455 0.00 0.00 0.00 2.15
6854 10278 0.732571 AAGAAAGCACACACCACACG 59.267 50.000 0.00 0.00 0.00 4.49
6891 10315 0.467290 TTGGTTTCTGAGGCACCCAC 60.467 55.000 0.00 0.00 0.00 4.61
6916 10340 4.872691 CCTGACCTTACAGAAATAGTGCTG 59.127 45.833 0.00 0.00 39.94 4.41
6956 10380 7.798071 TCATAATTAAATGGACGACCTTACCT 58.202 34.615 5.33 0.00 37.04 3.08
7027 10451 6.238130 GGAAACAAATAACTGGCTCTCGATAC 60.238 42.308 0.00 0.00 0.00 2.24
7036 10460 7.786178 AAAAGAAAGGAAACAAATAACTGGC 57.214 32.000 0.00 0.00 0.00 4.85
7066 10490 9.214957 AGAACATCTTATATTTGTGAACGAACA 57.785 29.630 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.