Multiple sequence alignment - TraesCS3B01G292100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G292100 chr3B 100.000 2123 0 0 1 2123 470501690 470503812 0.000000e+00 3921.0
1 TraesCS3B01G292100 chr3B 89.167 120 13 0 1977 2096 684261583 684261702 1.310000e-32 150.0
2 TraesCS3B01G292100 chr3D 92.284 1607 89 19 116 1702 361145896 361147487 0.000000e+00 2248.0
3 TraesCS3B01G292100 chr3A 86.000 1600 99 44 148 1705 481092324 481093840 0.000000e+00 1598.0
4 TraesCS3B01G292100 chr3A 89.167 120 13 0 1977 2096 686185456 686185575 1.310000e-32 150.0
5 TraesCS3B01G292100 chr2B 88.755 249 14 2 1730 1978 797799013 797799247 2.060000e-75 292.0
6 TraesCS3B01G292100 chr1D 93.388 121 8 0 1974 2094 453059914 453060034 1.670000e-41 180.0
7 TraesCS3B01G292100 chr1D 93.671 79 5 0 1033 1111 453269181 453269259 3.700000e-23 119.0
8 TraesCS3B01G292100 chrUn 89.474 133 12 2 1977 2108 246305694 246305563 1.300000e-37 167.0
9 TraesCS3B01G292100 chrUn 91.057 123 11 0 1974 2096 313907279 313907401 1.300000e-37 167.0
10 TraesCS3B01G292100 chrUn 88.722 133 13 2 1977 2108 217764516 217764385 6.060000e-36 161.0
11 TraesCS3B01G292100 chr5B 90.000 120 11 1 1977 2095 496581630 496581511 1.010000e-33 154.0
12 TraesCS3B01G292100 chr5B 88.430 121 14 0 1973 2093 383209969 383209849 1.700000e-31 147.0
13 TraesCS3B01G292100 chr1B 88.525 122 14 0 1974 2095 3239968 3240089 4.720000e-32 148.0
14 TraesCS3B01G292100 chr1B 93.671 79 5 0 1033 1111 623766360 623766438 3.700000e-23 119.0
15 TraesCS3B01G292100 chr1B 92.857 56 1 3 1057 1109 608379807 608379752 6.280000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G292100 chr3B 470501690 470503812 2122 False 3921 3921 100.000 1 2123 1 chr3B.!!$F1 2122
1 TraesCS3B01G292100 chr3D 361145896 361147487 1591 False 2248 2248 92.284 116 1702 1 chr3D.!!$F1 1586
2 TraesCS3B01G292100 chr3A 481092324 481093840 1516 False 1598 1598 86.000 148 1705 1 chr3A.!!$F1 1557

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.172803 GCTGAAGAGGCTTGGCAATG 59.827 55.0 0.0 0.0 0.0 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 2001 0.028505 GCTGCATGCATTCTACCACG 59.971 55.0 22.97 7.15 42.31 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.741985 CACCATCCGTGCGCTGAA 60.742 61.111 9.73 0.00 35.18 3.02
36 37 2.434884 ACCATCCGTGCGCTGAAG 60.435 61.111 9.73 0.00 0.00 3.02
37 38 2.125552 CCATCCGTGCGCTGAAGA 60.126 61.111 9.73 0.02 0.00 2.87
38 39 2.169789 CCATCCGTGCGCTGAAGAG 61.170 63.158 9.73 0.00 0.00 2.85
39 40 2.169789 CATCCGTGCGCTGAAGAGG 61.170 63.158 9.73 2.94 0.00 3.69
40 41 4.742201 TCCGTGCGCTGAAGAGGC 62.742 66.667 9.73 0.00 0.00 4.70
41 42 4.749310 CCGTGCGCTGAAGAGGCT 62.749 66.667 9.73 0.00 0.00 4.58
42 43 2.740055 CGTGCGCTGAAGAGGCTT 60.740 61.111 9.73 0.00 0.00 4.35
43 44 2.866028 GTGCGCTGAAGAGGCTTG 59.134 61.111 9.73 0.00 0.00 4.01
44 45 2.359107 TGCGCTGAAGAGGCTTGG 60.359 61.111 9.73 0.00 0.00 3.61
45 46 3.808656 GCGCTGAAGAGGCTTGGC 61.809 66.667 0.00 0.00 0.00 4.52
46 47 2.359107 CGCTGAAGAGGCTTGGCA 60.359 61.111 0.00 0.00 0.00 4.92
47 48 1.968017 CGCTGAAGAGGCTTGGCAA 60.968 57.895 0.00 0.00 0.00 4.52
48 49 1.310933 CGCTGAAGAGGCTTGGCAAT 61.311 55.000 0.00 0.00 0.00 3.56
49 50 0.172803 GCTGAAGAGGCTTGGCAATG 59.827 55.000 0.00 0.00 0.00 2.82
50 51 0.172803 CTGAAGAGGCTTGGCAATGC 59.827 55.000 0.00 6.75 0.00 3.56
61 62 4.883026 GCAATGCCACTCTTGCTG 57.117 55.556 0.00 0.00 43.41 4.41
62 63 1.445582 GCAATGCCACTCTTGCTGC 60.446 57.895 0.00 0.00 43.41 5.25
63 64 1.154093 CAATGCCACTCTTGCTGCG 60.154 57.895 0.00 0.00 0.00 5.18
64 65 2.338015 AATGCCACTCTTGCTGCGG 61.338 57.895 0.00 0.00 0.00 5.69
67 68 2.662596 CCACTCTTGCTGCGGGTA 59.337 61.111 0.00 0.00 0.00 3.69
68 69 1.741770 CCACTCTTGCTGCGGGTAC 60.742 63.158 0.00 0.00 0.00 3.34
69 70 2.094659 CACTCTTGCTGCGGGTACG 61.095 63.158 0.00 0.00 44.63 3.67
70 71 2.273179 ACTCTTGCTGCGGGTACGA 61.273 57.895 0.00 0.00 44.60 3.43
71 72 1.517257 CTCTTGCTGCGGGTACGAG 60.517 63.158 0.00 0.00 44.60 4.18
72 73 2.509336 CTTGCTGCGGGTACGAGG 60.509 66.667 0.00 0.00 44.60 4.63
73 74 2.992689 TTGCTGCGGGTACGAGGA 60.993 61.111 0.00 0.00 44.60 3.71
74 75 3.291101 TTGCTGCGGGTACGAGGAC 62.291 63.158 0.00 0.00 44.60 3.85
75 76 4.849329 GCTGCGGGTACGAGGACG 62.849 72.222 0.00 0.00 44.60 4.79
79 80 3.437795 CGGGTACGAGGACGCAGT 61.438 66.667 3.45 0.00 45.45 4.40
80 81 2.108514 CGGGTACGAGGACGCAGTA 61.109 63.158 3.45 0.00 42.93 2.74
81 82 1.442526 CGGGTACGAGGACGCAGTAT 61.443 60.000 3.45 0.00 42.93 2.12
82 83 3.577462 CGGGTACGAGGACGCAGTATG 62.577 61.905 3.45 0.00 42.93 2.39
91 92 3.264897 CGCAGTATGACAGGCGGC 61.265 66.667 0.00 0.00 45.27 6.53
92 93 3.264897 GCAGTATGACAGGCGGCG 61.265 66.667 0.51 0.51 39.69 6.46
93 94 2.586079 CAGTATGACAGGCGGCGG 60.586 66.667 9.78 7.74 39.69 6.13
94 95 2.758327 AGTATGACAGGCGGCGGA 60.758 61.111 17.37 0.00 0.00 5.54
95 96 2.279517 GTATGACAGGCGGCGGAG 60.280 66.667 17.37 6.85 0.00 4.63
96 97 3.536917 TATGACAGGCGGCGGAGG 61.537 66.667 17.37 3.71 0.00 4.30
101 102 4.473520 CAGGCGGCGGAGGTGATT 62.474 66.667 9.78 0.00 0.00 2.57
102 103 3.717294 AGGCGGCGGAGGTGATTT 61.717 61.111 9.78 0.00 0.00 2.17
103 104 2.750237 GGCGGCGGAGGTGATTTT 60.750 61.111 9.78 0.00 0.00 1.82
104 105 2.761195 GGCGGCGGAGGTGATTTTC 61.761 63.158 9.78 0.00 0.00 2.29
105 106 2.038269 GCGGCGGAGGTGATTTTCA 61.038 57.895 9.78 0.00 0.00 2.69
106 107 1.582610 GCGGCGGAGGTGATTTTCAA 61.583 55.000 9.78 0.00 0.00 2.69
107 108 1.094785 CGGCGGAGGTGATTTTCAAT 58.905 50.000 0.00 0.00 0.00 2.57
108 109 1.064060 CGGCGGAGGTGATTTTCAATC 59.936 52.381 0.00 0.00 0.00 2.67
109 110 1.064060 GGCGGAGGTGATTTTCAATCG 59.936 52.381 0.00 0.00 0.00 3.34
110 111 1.737793 GCGGAGGTGATTTTCAATCGT 59.262 47.619 0.00 0.00 0.00 3.73
111 112 2.161609 GCGGAGGTGATTTTCAATCGTT 59.838 45.455 0.00 0.00 0.00 3.85
112 113 3.747193 CGGAGGTGATTTTCAATCGTTG 58.253 45.455 0.00 0.00 0.00 4.10
113 114 3.435327 CGGAGGTGATTTTCAATCGTTGA 59.565 43.478 0.00 0.00 38.04 3.18
114 115 4.094887 CGGAGGTGATTTTCAATCGTTGAT 59.905 41.667 2.09 0.00 39.84 2.57
148 149 7.136119 TGAAGTAATCCATGTTTTCACGTTTC 58.864 34.615 0.00 0.00 0.00 2.78
169 170 2.661675 CGAAATGTACTGTCTCGTGGTG 59.338 50.000 0.00 0.00 0.00 4.17
213 214 1.592223 CGTGGTTCAGTCCCTCCTC 59.408 63.158 0.00 0.00 0.00 3.71
266 277 7.768120 GCATGCAGCCTCTACTTATAGAATTAT 59.232 37.037 14.21 0.00 36.98 1.28
288 299 8.911918 TTATAAGCAAAGTTCAACCTTCAGTA 57.088 30.769 0.00 0.00 0.00 2.74
360 375 1.202302 CGCGATCAGTTGCCTAGAAGA 60.202 52.381 0.00 0.00 0.00 2.87
409 424 1.667212 TCAATGCAGCTGATAAGCACG 59.333 47.619 20.43 2.91 41.60 5.34
410 425 1.667212 CAATGCAGCTGATAAGCACGA 59.333 47.619 20.43 0.00 41.60 4.35
411 426 2.028420 ATGCAGCTGATAAGCACGAA 57.972 45.000 20.43 0.00 41.60 3.85
422 437 5.105063 TGATAAGCACGAAGAGATCAGTTG 58.895 41.667 0.00 0.00 0.00 3.16
429 444 0.539051 AAGAGATCAGTTGCCCGGAG 59.461 55.000 0.73 0.00 0.00 4.63
492 507 4.797800 TCTCAACTCACCAGAATCTCTG 57.202 45.455 0.00 0.00 43.91 3.35
585 600 3.767673 AGTAGGAATGTCTAGCGGTCAAA 59.232 43.478 0.00 0.00 0.00 2.69
587 602 2.007608 GGAATGTCTAGCGGTCAAACC 58.992 52.381 0.00 0.00 34.05 3.27
588 603 2.614481 GGAATGTCTAGCGGTCAAACCA 60.614 50.000 0.00 0.00 38.47 3.67
589 604 3.270877 GAATGTCTAGCGGTCAAACCAT 58.729 45.455 0.00 0.00 38.47 3.55
590 605 4.439057 GAATGTCTAGCGGTCAAACCATA 58.561 43.478 0.00 0.00 38.47 2.74
594 609 3.555956 GTCTAGCGGTCAAACCATACATG 59.444 47.826 0.00 0.00 38.47 3.21
602 622 2.759535 TCAAACCATACATGCATGTGGG 59.240 45.455 36.72 34.85 41.89 4.61
821 851 0.584396 TGAACAACGGAACATGTCGC 59.416 50.000 0.00 0.00 0.00 5.19
895 925 3.197766 CCTATATAAAGCCCGCCAGATGA 59.802 47.826 0.00 0.00 0.00 2.92
918 948 7.432059 TGATATGAGATCAAAGCACACTAGAG 58.568 38.462 0.00 0.00 0.00 2.43
925 955 7.271511 AGATCAAAGCACACTAGAGATAAAGG 58.728 38.462 0.00 0.00 0.00 3.11
978 1008 5.122396 GGAACTGTATTCTGAAGCGAAACAT 59.878 40.000 0.00 0.00 0.00 2.71
1009 1039 2.639347 TCTTCAACCAGGATGAGCAAGA 59.361 45.455 0.00 0.00 39.69 3.02
1011 1041 1.081892 CAACCAGGATGAGCAAGACG 58.918 55.000 0.00 0.00 39.69 4.18
1014 1044 0.179089 CCAGGATGAGCAAGACGAGG 60.179 60.000 0.00 0.00 39.69 4.63
1020 1050 1.153667 GAGCAAGACGAGGAGCCAG 60.154 63.158 0.00 0.00 0.00 4.85
1147 1182 2.365617 AGGATCAGTGATCGGCGTATTT 59.634 45.455 23.56 2.65 39.72 1.40
1240 1275 8.684520 GTTCATGTGTAGTAGTACTTGGTAGAT 58.315 37.037 8.40 0.00 0.00 1.98
1272 1307 5.196695 GGGATCCTTGCTAGATTTTTGACT 58.803 41.667 12.58 0.00 0.00 3.41
1273 1308 5.654209 GGGATCCTTGCTAGATTTTTGACTT 59.346 40.000 12.58 0.00 0.00 3.01
1309 1346 1.959747 CTTGACATTCTTGCTGTGCG 58.040 50.000 0.00 0.00 0.00 5.34
1368 1424 3.367292 GGTTGATGTTATTGTGCTGTGGG 60.367 47.826 0.00 0.00 0.00 4.61
1373 1429 2.158682 TGTTATTGTGCTGTGGGAGTGT 60.159 45.455 0.00 0.00 0.00 3.55
1374 1430 2.183478 TATTGTGCTGTGGGAGTGTG 57.817 50.000 0.00 0.00 0.00 3.82
1375 1431 0.538057 ATTGTGCTGTGGGAGTGTGG 60.538 55.000 0.00 0.00 0.00 4.17
1376 1432 1.631071 TTGTGCTGTGGGAGTGTGGA 61.631 55.000 0.00 0.00 0.00 4.02
1377 1433 1.148273 GTGCTGTGGGAGTGTGGAA 59.852 57.895 0.00 0.00 0.00 3.53
1378 1434 0.886490 GTGCTGTGGGAGTGTGGAAG 60.886 60.000 0.00 0.00 0.00 3.46
1379 1435 1.344953 TGCTGTGGGAGTGTGGAAGT 61.345 55.000 0.00 0.00 0.00 3.01
1380 1436 0.886490 GCTGTGGGAGTGTGGAAGTG 60.886 60.000 0.00 0.00 0.00 3.16
1388 1444 2.263077 GAGTGTGGAAGTGCAGTATCG 58.737 52.381 0.00 0.00 0.00 2.92
1425 1481 1.460743 TGCTCAAGAGAATTCGCAACG 59.539 47.619 11.94 0.00 0.00 4.10
1447 1503 0.665835 ACGCACTTCGAAATTTGCCA 59.334 45.000 16.34 0.00 41.67 4.92
1448 1504 1.066303 ACGCACTTCGAAATTTGCCAA 59.934 42.857 16.34 0.00 41.67 4.52
1481 1537 1.358877 TGAGTTGCCATCGAATCGTG 58.641 50.000 1.52 0.41 0.00 4.35
1514 1571 3.244009 CGATCTGCCCATGATACTTCTGT 60.244 47.826 0.00 0.00 0.00 3.41
1516 1573 3.106827 TCTGCCCATGATACTTCTGTGA 58.893 45.455 0.00 0.00 0.00 3.58
1549 1606 5.124936 GGCGACAAGTTTACCCAGAATATTT 59.875 40.000 0.00 0.00 0.00 1.40
1601 1658 5.046231 TGTCCGTGCATATAATATGGCCTTA 60.046 40.000 3.32 1.49 0.00 2.69
1609 1666 7.611467 TGCATATAATATGGCCTTAACTCCTTG 59.389 37.037 3.32 0.00 0.00 3.61
1618 1675 3.879892 GCCTTAACTCCTTGCCAGATTAG 59.120 47.826 0.00 0.00 0.00 1.73
1687 1746 1.144298 TCATGCCAGATTGCCAGCTAT 59.856 47.619 0.00 0.00 0.00 2.97
1705 1764 1.753930 ATTCATGCATGCTCGGTTGA 58.246 45.000 22.25 10.89 0.00 3.18
1706 1765 1.753930 TTCATGCATGCTCGGTTGAT 58.246 45.000 22.25 0.00 0.00 2.57
1707 1766 1.753930 TCATGCATGCTCGGTTGATT 58.246 45.000 22.25 0.00 0.00 2.57
1708 1767 2.093890 TCATGCATGCTCGGTTGATTT 58.906 42.857 22.25 0.00 0.00 2.17
1709 1768 2.159352 TCATGCATGCTCGGTTGATTTG 60.159 45.455 22.25 0.00 0.00 2.32
1710 1769 1.532523 TGCATGCTCGGTTGATTTGA 58.467 45.000 20.33 0.00 0.00 2.69
1711 1770 1.469703 TGCATGCTCGGTTGATTTGAG 59.530 47.619 20.33 0.00 0.00 3.02
1712 1771 1.470098 GCATGCTCGGTTGATTTGAGT 59.530 47.619 11.37 0.00 32.32 3.41
1713 1772 2.095059 GCATGCTCGGTTGATTTGAGTT 60.095 45.455 11.37 0.00 32.32 3.01
1714 1773 3.751621 CATGCTCGGTTGATTTGAGTTC 58.248 45.455 0.00 0.00 32.32 3.01
1715 1774 1.798223 TGCTCGGTTGATTTGAGTTCG 59.202 47.619 0.00 0.00 32.32 3.95
1716 1775 1.128692 GCTCGGTTGATTTGAGTTCGG 59.871 52.381 0.00 0.00 32.32 4.30
1717 1776 1.128692 CTCGGTTGATTTGAGTTCGGC 59.871 52.381 0.00 0.00 0.00 5.54
1718 1777 0.871722 CGGTTGATTTGAGTTCGGCA 59.128 50.000 0.00 0.00 0.00 5.69
1719 1778 1.399727 CGGTTGATTTGAGTTCGGCAC 60.400 52.381 0.00 0.00 0.00 5.01
1720 1779 1.880027 GGTTGATTTGAGTTCGGCACT 59.120 47.619 0.00 0.00 39.07 4.40
1721 1780 2.350772 GGTTGATTTGAGTTCGGCACTG 60.351 50.000 0.00 0.00 35.01 3.66
1722 1781 0.874390 TGATTTGAGTTCGGCACTGC 59.126 50.000 0.00 0.00 35.01 4.40
1723 1782 0.874390 GATTTGAGTTCGGCACTGCA 59.126 50.000 2.82 0.00 35.01 4.41
1724 1783 0.877071 ATTTGAGTTCGGCACTGCAG 59.123 50.000 13.48 13.48 35.01 4.41
1725 1784 0.179059 TTTGAGTTCGGCACTGCAGA 60.179 50.000 23.35 0.87 35.01 4.26
1726 1785 0.035317 TTGAGTTCGGCACTGCAGAT 59.965 50.000 23.35 1.19 35.01 2.90
1727 1786 0.671472 TGAGTTCGGCACTGCAGATG 60.671 55.000 23.35 15.73 35.01 2.90
1728 1787 1.975363 GAGTTCGGCACTGCAGATGC 61.975 60.000 23.35 23.98 42.62 3.91
1729 1788 2.037136 GTTCGGCACTGCAGATGCT 61.037 57.895 28.26 5.16 42.93 3.79
1739 1798 3.121738 CTGCAGATGCTGTCATATGGA 57.878 47.619 8.42 5.32 41.07 3.41
1740 1799 2.806818 CTGCAGATGCTGTCATATGGAC 59.193 50.000 8.42 0.89 41.07 4.02
1741 1800 2.149578 GCAGATGCTGTCATATGGACC 58.850 52.381 2.13 0.00 46.38 4.46
1742 1801 2.410939 CAGATGCTGTCATATGGACCG 58.589 52.381 2.13 0.00 46.38 4.79
1743 1802 2.042464 AGATGCTGTCATATGGACCGT 58.958 47.619 2.13 0.00 46.38 4.83
1744 1803 2.435805 AGATGCTGTCATATGGACCGTT 59.564 45.455 2.13 0.00 46.38 4.44
1745 1804 2.022764 TGCTGTCATATGGACCGTTG 57.977 50.000 2.13 0.00 46.38 4.10
1746 1805 0.657840 GCTGTCATATGGACCGTTGC 59.342 55.000 2.13 0.00 46.38 4.17
1747 1806 2.011548 GCTGTCATATGGACCGTTGCA 61.012 52.381 2.13 0.00 46.38 4.08
1748 1807 2.564771 CTGTCATATGGACCGTTGCAT 58.435 47.619 2.13 0.00 46.38 3.96
1749 1808 2.545526 CTGTCATATGGACCGTTGCATC 59.454 50.000 2.13 0.00 46.38 3.91
1750 1809 2.170397 TGTCATATGGACCGTTGCATCT 59.830 45.455 2.13 0.00 46.38 2.90
1751 1810 3.206150 GTCATATGGACCGTTGCATCTT 58.794 45.455 2.13 0.00 40.83 2.40
1752 1811 3.627577 GTCATATGGACCGTTGCATCTTT 59.372 43.478 2.13 0.00 40.83 2.52
1753 1812 3.876914 TCATATGGACCGTTGCATCTTTC 59.123 43.478 2.13 0.00 35.09 2.62
1754 1813 2.496899 ATGGACCGTTGCATCTTTCT 57.503 45.000 0.00 0.00 0.00 2.52
1755 1814 3.627395 ATGGACCGTTGCATCTTTCTA 57.373 42.857 0.00 0.00 0.00 2.10
1756 1815 3.410631 TGGACCGTTGCATCTTTCTAA 57.589 42.857 0.00 0.00 0.00 2.10
1757 1816 3.950397 TGGACCGTTGCATCTTTCTAAT 58.050 40.909 0.00 0.00 0.00 1.73
1758 1817 3.938963 TGGACCGTTGCATCTTTCTAATC 59.061 43.478 0.00 0.00 0.00 1.75
1759 1818 3.312697 GGACCGTTGCATCTTTCTAATCC 59.687 47.826 0.00 0.00 0.00 3.01
1760 1819 3.938963 GACCGTTGCATCTTTCTAATCCA 59.061 43.478 0.00 0.00 0.00 3.41
1761 1820 4.331968 ACCGTTGCATCTTTCTAATCCAA 58.668 39.130 0.00 0.00 0.00 3.53
1762 1821 4.156008 ACCGTTGCATCTTTCTAATCCAAC 59.844 41.667 0.00 0.00 0.00 3.77
1763 1822 4.334443 CGTTGCATCTTTCTAATCCAACG 58.666 43.478 8.30 8.30 44.82 4.10
1764 1823 4.662145 GTTGCATCTTTCTAATCCAACGG 58.338 43.478 0.00 0.00 0.00 4.44
1765 1824 2.682856 TGCATCTTTCTAATCCAACGGC 59.317 45.455 0.00 0.00 0.00 5.68
1766 1825 2.945668 GCATCTTTCTAATCCAACGGCT 59.054 45.455 0.00 0.00 0.00 5.52
1767 1826 3.002759 GCATCTTTCTAATCCAACGGCTC 59.997 47.826 0.00 0.00 0.00 4.70
1768 1827 3.973206 TCTTTCTAATCCAACGGCTCA 57.027 42.857 0.00 0.00 0.00 4.26
1769 1828 4.280436 TCTTTCTAATCCAACGGCTCAA 57.720 40.909 0.00 0.00 0.00 3.02
1770 1829 4.647611 TCTTTCTAATCCAACGGCTCAAA 58.352 39.130 0.00 0.00 0.00 2.69
1771 1830 5.253330 TCTTTCTAATCCAACGGCTCAAAT 58.747 37.500 0.00 0.00 0.00 2.32
1772 1831 5.710099 TCTTTCTAATCCAACGGCTCAAATT 59.290 36.000 0.00 0.00 0.00 1.82
1773 1832 5.975693 TTCTAATCCAACGGCTCAAATTT 57.024 34.783 0.00 0.00 0.00 1.82
1774 1833 7.392113 TCTTTCTAATCCAACGGCTCAAATTTA 59.608 33.333 0.00 0.00 0.00 1.40
1775 1834 6.677781 TCTAATCCAACGGCTCAAATTTAG 57.322 37.500 0.00 0.00 0.00 1.85
1776 1835 6.177610 TCTAATCCAACGGCTCAAATTTAGT 58.822 36.000 0.00 0.00 0.00 2.24
1777 1836 4.701956 ATCCAACGGCTCAAATTTAGTG 57.298 40.909 0.00 0.00 0.00 2.74
1778 1837 2.817258 TCCAACGGCTCAAATTTAGTGG 59.183 45.455 0.00 0.00 0.00 4.00
1779 1838 2.595386 CAACGGCTCAAATTTAGTGGC 58.405 47.619 0.00 0.00 0.00 5.01
1780 1839 2.200373 ACGGCTCAAATTTAGTGGCT 57.800 45.000 0.00 0.00 0.00 4.75
1781 1840 2.514803 ACGGCTCAAATTTAGTGGCTT 58.485 42.857 0.00 0.00 0.00 4.35
1782 1841 2.228822 ACGGCTCAAATTTAGTGGCTTG 59.771 45.455 0.00 0.00 0.00 4.01
1783 1842 2.228822 CGGCTCAAATTTAGTGGCTTGT 59.771 45.455 0.00 0.00 0.00 3.16
1784 1843 3.578688 GGCTCAAATTTAGTGGCTTGTG 58.421 45.455 0.00 0.00 0.00 3.33
1785 1844 2.989166 GCTCAAATTTAGTGGCTTGTGC 59.011 45.455 0.00 0.00 38.76 4.57
1786 1845 3.305608 GCTCAAATTTAGTGGCTTGTGCT 60.306 43.478 0.00 0.00 36.10 4.40
1787 1846 4.082787 GCTCAAATTTAGTGGCTTGTGCTA 60.083 41.667 0.00 0.00 36.10 3.49
1788 1847 5.564651 GCTCAAATTTAGTGGCTTGTGCTAA 60.565 40.000 0.00 0.00 36.10 3.09
1789 1848 6.398234 TCAAATTTAGTGGCTTGTGCTAAA 57.602 33.333 0.00 0.00 38.52 1.85
1790 1849 6.446318 TCAAATTTAGTGGCTTGTGCTAAAG 58.554 36.000 0.00 0.00 37.87 1.85
1791 1850 6.264292 TCAAATTTAGTGGCTTGTGCTAAAGA 59.736 34.615 3.48 0.00 37.87 2.52
1792 1851 6.648879 AATTTAGTGGCTTGTGCTAAAGAA 57.351 33.333 3.48 0.00 37.87 2.52
1793 1852 5.432885 TTTAGTGGCTTGTGCTAAAGAAC 57.567 39.130 3.48 1.60 39.59 3.01
1794 1853 2.230660 AGTGGCTTGTGCTAAAGAACC 58.769 47.619 3.48 0.00 39.59 3.62
1795 1854 1.953686 GTGGCTTGTGCTAAAGAACCA 59.046 47.619 3.48 0.17 39.59 3.67
1796 1855 1.953686 TGGCTTGTGCTAAAGAACCAC 59.046 47.619 3.48 0.00 39.59 4.16
1797 1856 1.069227 GGCTTGTGCTAAAGAACCACG 60.069 52.381 3.48 0.00 39.59 4.94
1798 1857 1.602377 GCTTGTGCTAAAGAACCACGT 59.398 47.619 3.48 0.00 36.03 4.49
1799 1858 2.602217 GCTTGTGCTAAAGAACCACGTG 60.602 50.000 9.08 9.08 36.03 4.49
1800 1859 1.588674 TGTGCTAAAGAACCACGTGG 58.411 50.000 32.83 32.83 42.17 4.94
1814 1873 3.635331 CCACGTGGTTGTATATAGACCG 58.365 50.000 26.95 0.00 36.22 4.79
1815 1874 3.047796 CACGTGGTTGTATATAGACCGC 58.952 50.000 7.95 14.58 39.86 5.68
1816 1875 2.954318 ACGTGGTTGTATATAGACCGCT 59.046 45.455 19.14 9.31 40.81 5.52
1817 1876 4.023792 CACGTGGTTGTATATAGACCGCTA 60.024 45.833 19.14 0.00 40.81 4.26
1818 1877 4.214971 ACGTGGTTGTATATAGACCGCTAG 59.785 45.833 19.14 11.51 40.81 3.42
1819 1878 4.453478 CGTGGTTGTATATAGACCGCTAGA 59.547 45.833 19.14 0.28 40.81 2.43
1820 1879 5.123502 CGTGGTTGTATATAGACCGCTAGAT 59.876 44.000 19.14 0.00 40.81 1.98
1821 1880 6.314648 CGTGGTTGTATATAGACCGCTAGATA 59.685 42.308 19.14 0.00 40.81 1.98
1822 1881 7.012138 CGTGGTTGTATATAGACCGCTAGATAT 59.988 40.741 19.14 0.00 40.81 1.63
1823 1882 8.129840 GTGGTTGTATATAGACCGCTAGATATG 58.870 40.741 16.28 0.00 40.06 1.78
1824 1883 7.832685 TGGTTGTATATAGACCGCTAGATATGT 59.167 37.037 0.00 0.00 34.38 2.29
1825 1884 8.344098 GGTTGTATATAGACCGCTAGATATGTC 58.656 40.741 0.00 0.00 34.38 3.06
1826 1885 8.890718 GTTGTATATAGACCGCTAGATATGTCA 58.109 37.037 0.00 0.00 34.38 3.58
1827 1886 9.457436 TTGTATATAGACCGCTAGATATGTCAA 57.543 33.333 0.00 0.00 34.38 3.18
1828 1887 9.628500 TGTATATAGACCGCTAGATATGTCAAT 57.372 33.333 0.00 0.00 34.38 2.57
1830 1889 8.988546 ATATAGACCGCTAGATATGTCAATCT 57.011 34.615 0.00 0.00 39.54 2.40
1832 1891 8.809468 ATAGACCGCTAGATATGTCAATCTAA 57.191 34.615 0.00 0.00 37.87 2.10
1833 1892 6.915349 AGACCGCTAGATATGTCAATCTAAC 58.085 40.000 0.00 0.00 37.87 2.34
1834 1893 5.700846 ACCGCTAGATATGTCAATCTAACG 58.299 41.667 14.37 14.37 43.07 3.18
1836 1895 5.700846 CGCTAGATATGTCAATCTAACGGT 58.299 41.667 13.92 0.00 41.23 4.83
1837 1896 5.795939 CGCTAGATATGTCAATCTAACGGTC 59.204 44.000 13.92 0.00 41.23 4.79
1838 1897 6.348622 CGCTAGATATGTCAATCTAACGGTCT 60.349 42.308 13.92 0.00 41.23 3.85
1839 1898 7.148457 CGCTAGATATGTCAATCTAACGGTCTA 60.148 40.741 13.92 0.00 41.23 2.59
1840 1899 7.964011 GCTAGATATGTCAATCTAACGGTCTAC 59.036 40.741 0.00 0.00 37.87 2.59
1841 1900 7.818997 AGATATGTCAATCTAACGGTCTACA 57.181 36.000 0.00 0.00 34.40 2.74
1842 1901 8.234136 AGATATGTCAATCTAACGGTCTACAA 57.766 34.615 0.00 0.00 34.40 2.41
1843 1902 8.861086 AGATATGTCAATCTAACGGTCTACAAT 58.139 33.333 0.00 0.00 34.40 2.71
1844 1903 8.818141 ATATGTCAATCTAACGGTCTACAATG 57.182 34.615 0.00 0.00 0.00 2.82
1845 1904 4.868171 TGTCAATCTAACGGTCTACAATGC 59.132 41.667 0.00 0.00 0.00 3.56
1846 1905 4.868171 GTCAATCTAACGGTCTACAATGCA 59.132 41.667 0.00 0.00 0.00 3.96
1847 1906 5.005779 GTCAATCTAACGGTCTACAATGCAG 59.994 44.000 0.00 0.00 0.00 4.41
1848 1907 3.520290 TCTAACGGTCTACAATGCAGG 57.480 47.619 0.00 0.00 0.00 4.85
1849 1908 2.167693 TCTAACGGTCTACAATGCAGGG 59.832 50.000 0.00 0.00 0.00 4.45
1850 1909 0.981183 AACGGTCTACAATGCAGGGA 59.019 50.000 0.00 0.00 0.00 4.20
1851 1910 1.204146 ACGGTCTACAATGCAGGGAT 58.796 50.000 0.00 0.00 0.00 3.85
1852 1911 1.559682 ACGGTCTACAATGCAGGGATT 59.440 47.619 0.00 0.00 0.00 3.01
1853 1912 2.213499 CGGTCTACAATGCAGGGATTC 58.787 52.381 0.00 0.00 0.00 2.52
1854 1913 2.213499 GGTCTACAATGCAGGGATTCG 58.787 52.381 0.00 0.00 0.00 3.34
1855 1914 1.599542 GTCTACAATGCAGGGATTCGC 59.400 52.381 0.00 0.00 0.00 4.70
1856 1915 1.209261 TCTACAATGCAGGGATTCGCA 59.791 47.619 3.36 0.00 43.45 5.10
1857 1916 1.600957 CTACAATGCAGGGATTCGCAG 59.399 52.381 3.36 0.00 42.37 5.18
1858 1917 1.033746 ACAATGCAGGGATTCGCAGG 61.034 55.000 3.36 0.00 42.37 4.85
1859 1918 1.454479 AATGCAGGGATTCGCAGGG 60.454 57.895 3.36 0.00 42.37 4.45
1860 1919 4.802051 TGCAGGGATTCGCAGGGC 62.802 66.667 3.36 4.61 33.34 5.19
1879 1938 3.970410 CCCCTTCCTGTGCTGCCA 61.970 66.667 0.00 0.00 0.00 4.92
1880 1939 2.357836 CCCTTCCTGTGCTGCCAT 59.642 61.111 0.00 0.00 0.00 4.40
1881 1940 1.751927 CCCTTCCTGTGCTGCCATC 60.752 63.158 0.00 0.00 0.00 3.51
1882 1941 1.751927 CCTTCCTGTGCTGCCATCC 60.752 63.158 0.00 0.00 0.00 3.51
1883 1942 1.302285 CTTCCTGTGCTGCCATCCT 59.698 57.895 0.00 0.00 0.00 3.24
1884 1943 1.001764 TTCCTGTGCTGCCATCCTG 60.002 57.895 0.00 0.00 0.00 3.86
1885 1944 2.439701 CCTGTGCTGCCATCCTGG 60.440 66.667 0.00 0.00 41.55 4.45
1894 1953 2.503061 CCATCCTGGCACTCTCGG 59.497 66.667 0.00 0.00 0.00 4.63
1895 1954 2.060383 CCATCCTGGCACTCTCGGA 61.060 63.158 0.00 0.00 0.00 4.55
1896 1955 1.406065 CCATCCTGGCACTCTCGGAT 61.406 60.000 0.00 0.00 36.74 4.18
1897 1956 0.249784 CATCCTGGCACTCTCGGATG 60.250 60.000 15.66 15.66 44.71 3.51
1898 1957 2.037620 ATCCTGGCACTCTCGGATGC 62.038 60.000 4.56 0.00 41.29 3.91
1899 1958 2.580815 CTGGCACTCTCGGATGCA 59.419 61.111 4.64 0.00 43.93 3.96
1900 1959 1.521010 CTGGCACTCTCGGATGCAG 60.521 63.158 4.64 0.00 43.93 4.41
1901 1960 2.236223 CTGGCACTCTCGGATGCAGT 62.236 60.000 4.64 0.00 43.93 4.40
1902 1961 1.078848 GGCACTCTCGGATGCAGTT 60.079 57.895 4.64 0.00 43.93 3.16
1903 1962 0.674895 GGCACTCTCGGATGCAGTTT 60.675 55.000 4.64 0.00 43.93 2.66
1904 1963 0.445436 GCACTCTCGGATGCAGTTTG 59.555 55.000 0.00 0.00 41.65 2.93
1905 1964 1.800805 CACTCTCGGATGCAGTTTGT 58.199 50.000 0.00 0.00 0.00 2.83
1906 1965 2.930887 GCACTCTCGGATGCAGTTTGTA 60.931 50.000 0.00 0.00 41.65 2.41
1907 1966 2.926200 CACTCTCGGATGCAGTTTGTAG 59.074 50.000 0.00 0.00 0.00 2.74
1908 1967 2.093973 ACTCTCGGATGCAGTTTGTAGG 60.094 50.000 0.00 0.00 0.00 3.18
1909 1968 1.207089 TCTCGGATGCAGTTTGTAGGG 59.793 52.381 0.00 0.00 0.00 3.53
1910 1969 0.981183 TCGGATGCAGTTTGTAGGGT 59.019 50.000 0.00 0.00 0.00 4.34
1911 1970 1.066430 TCGGATGCAGTTTGTAGGGTC 60.066 52.381 0.00 0.00 0.00 4.46
1912 1971 1.338674 CGGATGCAGTTTGTAGGGTCA 60.339 52.381 0.00 0.00 0.00 4.02
1913 1972 2.084546 GGATGCAGTTTGTAGGGTCAC 58.915 52.381 0.00 0.00 0.00 3.67
1914 1973 2.290323 GGATGCAGTTTGTAGGGTCACT 60.290 50.000 0.00 0.00 0.00 3.41
1915 1974 2.254546 TGCAGTTTGTAGGGTCACTG 57.745 50.000 0.00 0.00 39.79 3.66
1917 1976 1.523758 CAGTTTGTAGGGTCACTGCC 58.476 55.000 0.00 0.00 30.79 4.85
1918 1977 1.136828 AGTTTGTAGGGTCACTGCCA 58.863 50.000 0.00 0.00 0.00 4.92
1919 1978 1.705186 AGTTTGTAGGGTCACTGCCAT 59.295 47.619 0.00 0.00 0.00 4.40
1920 1979 2.084546 GTTTGTAGGGTCACTGCCATC 58.915 52.381 0.00 0.00 0.00 3.51
1921 1980 0.618458 TTGTAGGGTCACTGCCATCC 59.382 55.000 0.00 0.00 0.00 3.51
1922 1981 1.271840 TGTAGGGTCACTGCCATCCC 61.272 60.000 0.00 0.00 40.16 3.85
1923 1982 1.692749 TAGGGTCACTGCCATCCCC 60.693 63.158 0.00 0.00 40.70 4.81
1924 1983 2.484868 TAGGGTCACTGCCATCCCCA 62.485 60.000 0.00 0.00 40.70 4.96
1925 1984 2.763215 GGTCACTGCCATCCCCAA 59.237 61.111 0.00 0.00 0.00 4.12
1926 1985 1.076549 GGTCACTGCCATCCCCAAA 59.923 57.895 0.00 0.00 0.00 3.28
1927 1986 0.324645 GGTCACTGCCATCCCCAAAT 60.325 55.000 0.00 0.00 0.00 2.32
1928 1987 1.560505 GTCACTGCCATCCCCAAATT 58.439 50.000 0.00 0.00 0.00 1.82
1929 1988 1.901833 GTCACTGCCATCCCCAAATTT 59.098 47.619 0.00 0.00 0.00 1.82
1930 1989 2.094026 GTCACTGCCATCCCCAAATTTC 60.094 50.000 0.00 0.00 0.00 2.17
1931 1990 2.181975 CACTGCCATCCCCAAATTTCT 58.818 47.619 0.00 0.00 0.00 2.52
1932 1991 3.011144 TCACTGCCATCCCCAAATTTCTA 59.989 43.478 0.00 0.00 0.00 2.10
1933 1992 3.382546 CACTGCCATCCCCAAATTTCTAG 59.617 47.826 0.00 0.00 0.00 2.43
1934 1993 2.363359 CTGCCATCCCCAAATTTCTAGC 59.637 50.000 0.00 0.00 0.00 3.42
1935 1994 2.292126 TGCCATCCCCAAATTTCTAGCA 60.292 45.455 0.00 0.00 0.00 3.49
1936 1995 2.363359 GCCATCCCCAAATTTCTAGCAG 59.637 50.000 0.00 0.00 0.00 4.24
1937 1996 3.902218 CCATCCCCAAATTTCTAGCAGA 58.098 45.455 0.00 0.00 0.00 4.26
1938 1997 3.633986 CCATCCCCAAATTTCTAGCAGAC 59.366 47.826 0.00 0.00 0.00 3.51
1939 1998 4.530875 CATCCCCAAATTTCTAGCAGACT 58.469 43.478 0.00 0.00 0.00 3.24
1940 1999 4.222124 TCCCCAAATTTCTAGCAGACTC 57.778 45.455 0.00 0.00 0.00 3.36
1941 2000 3.846588 TCCCCAAATTTCTAGCAGACTCT 59.153 43.478 0.00 0.00 0.00 3.24
1942 2001 4.080863 TCCCCAAATTTCTAGCAGACTCTC 60.081 45.833 0.00 0.00 0.00 3.20
1943 2002 3.868077 CCCAAATTTCTAGCAGACTCTCG 59.132 47.826 0.00 0.00 0.00 4.04
1944 2003 4.499183 CCAAATTTCTAGCAGACTCTCGT 58.501 43.478 0.00 0.00 0.00 4.18
1945 2004 4.328440 CCAAATTTCTAGCAGACTCTCGTG 59.672 45.833 0.00 0.00 0.00 4.35
1946 2005 3.791973 ATTTCTAGCAGACTCTCGTGG 57.208 47.619 0.00 0.00 0.00 4.94
1947 2006 2.201921 TTCTAGCAGACTCTCGTGGT 57.798 50.000 0.00 0.00 0.00 4.16
1948 2007 3.345508 TTCTAGCAGACTCTCGTGGTA 57.654 47.619 0.00 0.00 0.00 3.25
1949 2008 2.907634 TCTAGCAGACTCTCGTGGTAG 58.092 52.381 2.81 2.81 43.24 3.18
1950 2009 2.500504 TCTAGCAGACTCTCGTGGTAGA 59.499 50.000 7.07 7.07 46.44 2.59
1951 2010 2.201921 AGCAGACTCTCGTGGTAGAA 57.798 50.000 0.00 0.00 0.00 2.10
1952 2011 2.729194 AGCAGACTCTCGTGGTAGAAT 58.271 47.619 0.00 0.00 0.00 2.40
1953 2012 2.425312 AGCAGACTCTCGTGGTAGAATG 59.575 50.000 0.00 0.00 0.00 2.67
1954 2013 2.803451 CAGACTCTCGTGGTAGAATGC 58.197 52.381 0.00 0.00 0.00 3.56
1955 2014 2.164422 CAGACTCTCGTGGTAGAATGCA 59.836 50.000 0.00 0.00 0.00 3.96
1956 2015 3.027412 AGACTCTCGTGGTAGAATGCAT 58.973 45.455 0.00 0.00 0.00 3.96
1957 2016 3.119291 GACTCTCGTGGTAGAATGCATG 58.881 50.000 0.00 0.00 0.00 4.06
1958 2017 1.863454 CTCTCGTGGTAGAATGCATGC 59.137 52.381 11.82 11.82 0.00 4.06
1959 2018 1.206849 TCTCGTGGTAGAATGCATGCA 59.793 47.619 25.04 25.04 0.00 3.96
1960 2019 1.596260 CTCGTGGTAGAATGCATGCAG 59.404 52.381 26.69 8.97 0.00 4.41
1961 2020 0.028505 CGTGGTAGAATGCATGCAGC 59.971 55.000 26.69 19.60 45.96 5.25
1973 2032 2.610433 GCATGCAGCGATATAGTAGCA 58.390 47.619 14.21 6.75 36.34 3.49
1974 2033 2.995939 GCATGCAGCGATATAGTAGCAA 59.004 45.455 14.21 0.00 35.45 3.91
1975 2034 3.181526 GCATGCAGCGATATAGTAGCAAC 60.182 47.826 14.21 2.21 35.45 4.17
1976 2035 4.240888 CATGCAGCGATATAGTAGCAACT 58.759 43.478 7.98 0.00 39.91 3.16
1977 2036 5.402398 CATGCAGCGATATAGTAGCAACTA 58.598 41.667 7.98 0.00 42.35 2.24
1978 2037 4.795268 TGCAGCGATATAGTAGCAACTAC 58.205 43.478 0.00 0.00 40.98 2.73
1980 2039 5.090083 GCAGCGATATAGTAGCAACTACTC 58.910 45.833 10.42 0.00 42.87 2.59
1981 2040 5.632959 CAGCGATATAGTAGCAACTACTCC 58.367 45.833 10.42 0.05 42.87 3.85
1982 2041 4.701171 AGCGATATAGTAGCAACTACTCCC 59.299 45.833 10.42 0.00 42.87 4.30
1983 2042 4.701171 GCGATATAGTAGCAACTACTCCCT 59.299 45.833 10.42 1.23 42.87 4.20
1984 2043 5.183522 GCGATATAGTAGCAACTACTCCCTT 59.816 44.000 10.42 0.00 42.87 3.95
1985 2044 6.623331 GCGATATAGTAGCAACTACTCCCTTC 60.623 46.154 10.42 4.39 42.87 3.46
1986 2045 6.402334 CGATATAGTAGCAACTACTCCCTTCG 60.402 46.154 10.42 11.05 42.87 3.79
1987 2046 2.805194 AGTAGCAACTACTCCCTTCGT 58.195 47.619 1.40 0.00 42.87 3.85
1988 2047 2.754002 AGTAGCAACTACTCCCTTCGTC 59.246 50.000 1.40 0.00 42.87 4.20
1989 2048 0.896226 AGCAACTACTCCCTTCGTCC 59.104 55.000 0.00 0.00 0.00 4.79
1990 2049 0.458025 GCAACTACTCCCTTCGTCCG 60.458 60.000 0.00 0.00 0.00 4.79
1991 2050 0.172803 CAACTACTCCCTTCGTCCGG 59.827 60.000 0.00 0.00 0.00 5.14
1992 2051 0.038744 AACTACTCCCTTCGTCCGGA 59.961 55.000 0.00 0.00 0.00 5.14
1993 2052 0.038744 ACTACTCCCTTCGTCCGGAA 59.961 55.000 5.23 0.00 0.00 4.30
1994 2053 1.341778 ACTACTCCCTTCGTCCGGAAT 60.342 52.381 5.23 0.00 33.26 3.01
1995 2054 1.755380 CTACTCCCTTCGTCCGGAATT 59.245 52.381 5.23 0.00 33.26 2.17
1996 2055 1.856629 ACTCCCTTCGTCCGGAATTA 58.143 50.000 5.23 0.00 33.26 1.40
1997 2056 1.479730 ACTCCCTTCGTCCGGAATTAC 59.520 52.381 5.23 0.00 33.26 1.89
1998 2057 1.755380 CTCCCTTCGTCCGGAATTACT 59.245 52.381 5.23 0.00 33.26 2.24
1999 2058 2.167900 CTCCCTTCGTCCGGAATTACTT 59.832 50.000 5.23 0.00 33.26 2.24
2000 2059 2.093869 TCCCTTCGTCCGGAATTACTTG 60.094 50.000 5.23 0.00 33.26 3.16
2001 2060 2.354403 CCCTTCGTCCGGAATTACTTGT 60.354 50.000 5.23 0.00 33.26 3.16
2002 2061 2.928116 CCTTCGTCCGGAATTACTTGTC 59.072 50.000 5.23 0.00 33.26 3.18
2003 2062 2.267188 TCGTCCGGAATTACTTGTCG 57.733 50.000 5.23 1.58 0.00 4.35
2004 2063 0.643820 CGTCCGGAATTACTTGTCGC 59.356 55.000 5.23 0.00 0.00 5.19
2005 2064 1.717194 GTCCGGAATTACTTGTCGCA 58.283 50.000 5.23 0.00 0.00 5.10
2006 2065 2.277084 GTCCGGAATTACTTGTCGCAT 58.723 47.619 5.23 0.00 0.00 4.73
2007 2066 3.450578 GTCCGGAATTACTTGTCGCATA 58.549 45.455 5.23 0.00 0.00 3.14
2008 2067 3.866910 GTCCGGAATTACTTGTCGCATAA 59.133 43.478 5.23 0.00 0.00 1.90
2009 2068 4.330620 GTCCGGAATTACTTGTCGCATAAA 59.669 41.667 5.23 0.00 0.00 1.40
2010 2069 5.007332 GTCCGGAATTACTTGTCGCATAAAT 59.993 40.000 5.23 0.00 0.00 1.40
2011 2070 5.007234 TCCGGAATTACTTGTCGCATAAATG 59.993 40.000 0.00 0.00 0.00 2.32
2012 2071 5.007234 CCGGAATTACTTGTCGCATAAATGA 59.993 40.000 0.00 0.00 0.00 2.57
2013 2072 6.457663 CCGGAATTACTTGTCGCATAAATGAA 60.458 38.462 0.00 0.00 0.00 2.57
2014 2073 7.132213 CGGAATTACTTGTCGCATAAATGAAT 58.868 34.615 0.00 0.00 0.00 2.57
2015 2074 7.112009 CGGAATTACTTGTCGCATAAATGAATG 59.888 37.037 0.00 0.00 0.00 2.67
2016 2075 8.128582 GGAATTACTTGTCGCATAAATGAATGA 58.871 33.333 0.00 0.00 0.00 2.57
2017 2076 9.502145 GAATTACTTGTCGCATAAATGAATGAA 57.498 29.630 0.00 0.00 0.00 2.57
2018 2077 9.853555 AATTACTTGTCGCATAAATGAATGAAA 57.146 25.926 0.00 0.00 0.00 2.69
2019 2078 9.853555 ATTACTTGTCGCATAAATGAATGAAAA 57.146 25.926 0.00 0.00 0.00 2.29
2020 2079 9.853555 TTACTTGTCGCATAAATGAATGAAAAT 57.146 25.926 0.00 0.00 0.00 1.82
2021 2080 8.176814 ACTTGTCGCATAAATGAATGAAAATG 57.823 30.769 0.00 0.00 0.00 2.32
2022 2081 8.028354 ACTTGTCGCATAAATGAATGAAAATGA 58.972 29.630 0.00 0.00 0.00 2.57
2023 2082 8.754230 TTGTCGCATAAATGAATGAAAATGAA 57.246 26.923 0.00 0.00 0.00 2.57
2024 2083 8.929827 TGTCGCATAAATGAATGAAAATGAAT 57.070 26.923 0.00 0.00 0.00 2.57
2025 2084 8.809478 TGTCGCATAAATGAATGAAAATGAATG 58.191 29.630 0.00 0.00 0.00 2.67
2026 2085 8.810427 GTCGCATAAATGAATGAAAATGAATGT 58.190 29.630 0.00 0.00 0.00 2.71
2084 2143 4.735662 TTCAACAAGTATTTTCGGACGG 57.264 40.909 0.00 0.00 0.00 4.79
2085 2144 3.992643 TCAACAAGTATTTTCGGACGGA 58.007 40.909 0.00 0.00 0.00 4.69
2086 2145 3.991773 TCAACAAGTATTTTCGGACGGAG 59.008 43.478 0.00 0.00 0.00 4.63
2087 2146 2.968675 ACAAGTATTTTCGGACGGAGG 58.031 47.619 0.00 0.00 0.00 4.30
2088 2147 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2089 2148 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2090 2149 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2091 2150 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
2092 2151 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
2093 2152 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2094 2153 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
2095 2154 0.911769 TTCGGACGGAGGGAGTACTA 59.088 55.000 0.00 0.00 0.00 1.82
2096 2155 0.467384 TCGGACGGAGGGAGTACTAG 59.533 60.000 0.00 0.00 0.00 2.57
2097 2156 1.165284 CGGACGGAGGGAGTACTAGC 61.165 65.000 0.00 0.00 0.00 3.42
2098 2157 0.106819 GGACGGAGGGAGTACTAGCA 60.107 60.000 0.00 0.00 0.00 3.49
2099 2158 1.684248 GGACGGAGGGAGTACTAGCAA 60.684 57.143 0.00 0.00 0.00 3.91
2100 2159 1.677052 GACGGAGGGAGTACTAGCAAG 59.323 57.143 0.00 0.00 0.00 4.01
2101 2160 0.386113 CGGAGGGAGTACTAGCAAGC 59.614 60.000 0.00 0.00 0.00 4.01
2102 2161 1.783071 GGAGGGAGTACTAGCAAGCT 58.217 55.000 0.00 0.00 0.00 3.74
2103 2162 2.748798 CGGAGGGAGTACTAGCAAGCTA 60.749 54.545 0.00 1.37 0.00 3.32
2104 2163 2.624364 GGAGGGAGTACTAGCAAGCTAC 59.376 54.545 0.00 0.00 0.00 3.58
2105 2164 2.624364 GAGGGAGTACTAGCAAGCTACC 59.376 54.545 0.00 0.00 32.17 3.18
2106 2165 2.024273 AGGGAGTACTAGCAAGCTACCA 60.024 50.000 0.00 0.00 34.44 3.25
2107 2166 2.764572 GGGAGTACTAGCAAGCTACCAA 59.235 50.000 0.00 0.00 32.31 3.67
2108 2167 3.181474 GGGAGTACTAGCAAGCTACCAAG 60.181 52.174 0.00 0.00 32.31 3.61
2109 2168 3.447944 GGAGTACTAGCAAGCTACCAAGT 59.552 47.826 0.00 0.00 0.00 3.16
2110 2169 4.440387 GGAGTACTAGCAAGCTACCAAGTC 60.440 50.000 0.00 0.02 0.00 3.01
2111 2170 2.656560 ACTAGCAAGCTACCAAGTCG 57.343 50.000 0.00 0.00 0.00 4.18
2112 2171 1.204941 ACTAGCAAGCTACCAAGTCGG 59.795 52.381 0.00 0.00 42.50 4.79
2113 2172 0.108329 TAGCAAGCTACCAAGTCGGC 60.108 55.000 0.00 0.00 39.03 5.54
2114 2173 1.671054 GCAAGCTACCAAGTCGGCA 60.671 57.895 0.00 0.00 39.03 5.69
2115 2174 1.026718 GCAAGCTACCAAGTCGGCAT 61.027 55.000 0.00 0.00 39.03 4.40
2116 2175 1.009829 CAAGCTACCAAGTCGGCATC 58.990 55.000 0.00 0.00 39.03 3.91
2117 2176 0.613260 AAGCTACCAAGTCGGCATCA 59.387 50.000 0.00 0.00 39.03 3.07
2118 2177 0.833287 AGCTACCAAGTCGGCATCAT 59.167 50.000 0.00 0.00 39.03 2.45
2119 2178 1.210478 AGCTACCAAGTCGGCATCATT 59.790 47.619 0.00 0.00 39.03 2.57
2120 2179 2.434336 AGCTACCAAGTCGGCATCATTA 59.566 45.455 0.00 0.00 39.03 1.90
2121 2180 3.071602 AGCTACCAAGTCGGCATCATTAT 59.928 43.478 0.00 0.00 39.03 1.28
2122 2181 3.187227 GCTACCAAGTCGGCATCATTATG 59.813 47.826 0.00 0.00 39.03 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.434884 CTTCAGCGCACGGATGGT 60.435 61.111 11.47 0.00 31.40 3.55
20 21 2.125552 TCTTCAGCGCACGGATGG 60.126 61.111 11.47 0.91 31.40 3.51
21 22 2.169789 CCTCTTCAGCGCACGGATG 61.170 63.158 11.47 6.73 0.00 3.51
22 23 2.185350 CCTCTTCAGCGCACGGAT 59.815 61.111 11.47 0.00 0.00 4.18
23 24 4.742201 GCCTCTTCAGCGCACGGA 62.742 66.667 11.47 0.19 0.00 4.69
24 25 4.749310 AGCCTCTTCAGCGCACGG 62.749 66.667 11.47 0.00 34.64 4.94
25 26 2.740055 AAGCCTCTTCAGCGCACG 60.740 61.111 11.47 0.00 34.64 5.34
26 27 2.684843 CCAAGCCTCTTCAGCGCAC 61.685 63.158 11.47 0.00 34.64 5.34
27 28 2.359107 CCAAGCCTCTTCAGCGCA 60.359 61.111 11.47 0.00 34.64 6.09
28 29 3.808656 GCCAAGCCTCTTCAGCGC 61.809 66.667 0.00 0.00 34.64 5.92
29 30 1.310933 ATTGCCAAGCCTCTTCAGCG 61.311 55.000 0.00 0.00 34.64 5.18
30 31 0.172803 CATTGCCAAGCCTCTTCAGC 59.827 55.000 0.00 0.00 0.00 4.26
31 32 0.172803 GCATTGCCAAGCCTCTTCAG 59.827 55.000 0.00 0.00 0.00 3.02
32 33 2.269978 GCATTGCCAAGCCTCTTCA 58.730 52.632 0.00 0.00 0.00 3.02
45 46 1.154093 CGCAGCAAGAGTGGCATTG 60.154 57.895 0.00 0.00 0.00 2.82
46 47 2.338015 CCGCAGCAAGAGTGGCATT 61.338 57.895 0.00 0.00 0.00 3.56
47 48 2.749044 CCGCAGCAAGAGTGGCAT 60.749 61.111 0.00 0.00 0.00 4.40
49 50 3.605749 TACCCGCAGCAAGAGTGGC 62.606 63.158 0.00 0.00 35.33 5.01
50 51 1.741770 GTACCCGCAGCAAGAGTGG 60.742 63.158 0.00 0.00 36.41 4.00
51 52 2.094659 CGTACCCGCAGCAAGAGTG 61.095 63.158 0.00 0.00 0.00 3.51
52 53 2.214181 CTCGTACCCGCAGCAAGAGT 62.214 60.000 0.00 0.00 0.00 3.24
53 54 1.517257 CTCGTACCCGCAGCAAGAG 60.517 63.158 0.00 0.00 0.00 2.85
54 55 2.571757 CTCGTACCCGCAGCAAGA 59.428 61.111 0.00 0.00 0.00 3.02
55 56 2.509336 CCTCGTACCCGCAGCAAG 60.509 66.667 0.00 0.00 0.00 4.01
56 57 2.992689 TCCTCGTACCCGCAGCAA 60.993 61.111 0.00 0.00 0.00 3.91
57 58 3.755628 GTCCTCGTACCCGCAGCA 61.756 66.667 0.00 0.00 0.00 4.41
58 59 4.849329 CGTCCTCGTACCCGCAGC 62.849 72.222 0.00 0.00 0.00 5.25
59 60 4.849329 GCGTCCTCGTACCCGCAG 62.849 72.222 0.00 0.00 45.12 5.18
61 62 4.849329 CTGCGTCCTCGTACCCGC 62.849 72.222 0.00 0.00 45.92 6.13
62 63 1.442526 ATACTGCGTCCTCGTACCCG 61.443 60.000 0.00 0.00 39.49 5.28
63 64 0.030369 CATACTGCGTCCTCGTACCC 59.970 60.000 0.00 0.00 39.49 3.69
64 65 1.019673 TCATACTGCGTCCTCGTACC 58.980 55.000 0.00 0.00 39.49 3.34
65 66 1.399440 TGTCATACTGCGTCCTCGTAC 59.601 52.381 0.00 0.00 39.49 3.67
66 67 1.669265 CTGTCATACTGCGTCCTCGTA 59.331 52.381 0.00 0.00 39.49 3.43
67 68 0.452184 CTGTCATACTGCGTCCTCGT 59.548 55.000 0.00 0.00 39.49 4.18
68 69 0.248661 CCTGTCATACTGCGTCCTCG 60.249 60.000 0.00 0.00 40.37 4.63
69 70 0.528684 GCCTGTCATACTGCGTCCTC 60.529 60.000 0.00 0.00 0.00 3.71
70 71 1.517832 GCCTGTCATACTGCGTCCT 59.482 57.895 0.00 0.00 0.00 3.85
71 72 1.878522 CGCCTGTCATACTGCGTCC 60.879 63.158 0.00 0.00 41.95 4.79
72 73 1.878522 CCGCCTGTCATACTGCGTC 60.879 63.158 11.50 0.00 45.18 5.19
73 74 2.184322 CCGCCTGTCATACTGCGT 59.816 61.111 11.50 0.00 45.18 5.24
74 75 3.264897 GCCGCCTGTCATACTGCG 61.265 66.667 0.00 0.00 46.14 5.18
75 76 3.264897 CGCCGCCTGTCATACTGC 61.265 66.667 0.00 0.00 0.00 4.40
76 77 2.586079 CCGCCGCCTGTCATACTG 60.586 66.667 0.00 0.00 0.00 2.74
77 78 2.758327 TCCGCCGCCTGTCATACT 60.758 61.111 0.00 0.00 0.00 2.12
78 79 2.279517 CTCCGCCGCCTGTCATAC 60.280 66.667 0.00 0.00 0.00 2.39
79 80 3.536917 CCTCCGCCGCCTGTCATA 61.537 66.667 0.00 0.00 0.00 2.15
84 85 3.976701 AAATCACCTCCGCCGCCTG 62.977 63.158 0.00 0.00 0.00 4.85
85 86 3.268103 AAAATCACCTCCGCCGCCT 62.268 57.895 0.00 0.00 0.00 5.52
86 87 2.750237 AAAATCACCTCCGCCGCC 60.750 61.111 0.00 0.00 0.00 6.13
87 88 1.582610 TTGAAAATCACCTCCGCCGC 61.583 55.000 0.00 0.00 0.00 6.53
88 89 1.064060 GATTGAAAATCACCTCCGCCG 59.936 52.381 0.00 0.00 0.00 6.46
89 90 1.064060 CGATTGAAAATCACCTCCGCC 59.936 52.381 1.30 0.00 0.00 6.13
90 91 1.737793 ACGATTGAAAATCACCTCCGC 59.262 47.619 0.00 0.00 0.00 5.54
91 92 3.435327 TCAACGATTGAAAATCACCTCCG 59.565 43.478 0.00 0.00 36.59 4.63
92 93 5.567138 ATCAACGATTGAAAATCACCTCC 57.433 39.130 0.00 0.00 43.95 4.30
93 94 6.611381 TGAATCAACGATTGAAAATCACCTC 58.389 36.000 0.00 0.00 43.95 3.85
94 95 6.573664 TGAATCAACGATTGAAAATCACCT 57.426 33.333 0.00 0.00 43.95 4.00
95 96 7.219535 CAGATGAATCAACGATTGAAAATCACC 59.780 37.037 0.00 0.00 43.95 4.02
96 97 7.964559 TCAGATGAATCAACGATTGAAAATCAC 59.035 33.333 0.00 0.01 43.95 3.06
97 98 8.042944 TCAGATGAATCAACGATTGAAAATCA 57.957 30.769 0.00 3.54 43.95 2.57
98 99 8.955002 CATCAGATGAATCAACGATTGAAAATC 58.045 33.333 4.11 1.83 43.95 2.17
99 100 8.680001 TCATCAGATGAATCAACGATTGAAAAT 58.320 29.630 10.93 0.00 37.53 1.82
100 101 8.042944 TCATCAGATGAATCAACGATTGAAAA 57.957 30.769 10.93 0.00 37.53 2.29
101 102 7.614124 TCATCAGATGAATCAACGATTGAAA 57.386 32.000 10.93 0.00 37.53 2.69
102 103 7.614124 TTCATCAGATGAATCAACGATTGAA 57.386 32.000 20.18 0.00 43.84 2.69
114 115 8.812513 AAACATGGATTACTTCATCAGATGAA 57.187 30.769 22.16 22.16 46.30 2.57
148 149 2.661675 CACCACGAGACAGTACATTTCG 59.338 50.000 8.08 8.08 37.31 3.46
173 174 4.377841 CGGAGAAAGTGAGAATGACAAAGC 60.378 45.833 0.00 0.00 0.00 3.51
220 221 6.146510 GCATGCATTTCACATTTTCTTCAGAA 59.853 34.615 14.21 0.00 0.00 3.02
222 223 5.407084 TGCATGCATTTCACATTTTCTTCAG 59.593 36.000 18.46 0.00 0.00 3.02
227 228 3.181514 GGCTGCATGCATTTCACATTTTC 60.182 43.478 22.97 0.00 45.15 2.29
266 277 7.817418 ATTACTGAAGGTTGAACTTTGCTTA 57.183 32.000 0.00 0.00 0.00 3.09
267 278 6.715347 ATTACTGAAGGTTGAACTTTGCTT 57.285 33.333 0.00 0.00 0.00 3.91
288 299 6.351711 ACAGACATGTGTATCAGTGCATATT 58.648 36.000 1.15 0.00 38.57 1.28
360 375 6.360370 ACAGACATGTGTATAAGTTCCAGT 57.640 37.500 1.15 0.00 38.57 4.00
467 482 2.370281 TTCTGGTGAGTTGAGATCGC 57.630 50.000 0.00 0.00 0.00 4.58
585 600 1.284491 TCACCCACATGCATGTATGGT 59.716 47.619 32.36 32.36 42.43 3.55
587 602 1.335810 GCTCACCCACATGCATGTATG 59.664 52.381 30.92 26.05 39.39 2.39
588 603 1.064537 TGCTCACCCACATGCATGTAT 60.065 47.619 30.92 17.04 39.39 2.29
589 604 0.327591 TGCTCACCCACATGCATGTA 59.672 50.000 30.92 15.00 39.39 2.29
590 605 0.540133 TTGCTCACCCACATGCATGT 60.540 50.000 26.61 26.61 42.84 3.21
594 609 0.174162 GGATTTGCTCACCCACATGC 59.826 55.000 0.00 0.00 0.00 4.06
602 622 2.409870 CCGGCTGGGATTTGCTCAC 61.410 63.158 2.57 0.00 38.47 3.51
784 814 5.964758 TGTTCAGAAAAATCATATGCCACC 58.035 37.500 0.00 0.00 0.00 4.61
821 851 4.093556 GGCTAGTTTAGTTGTAGCTTGCAG 59.906 45.833 0.00 0.00 39.36 4.41
837 867 1.901085 CCGGCTCTCTTGGCTAGTT 59.099 57.895 0.00 0.00 0.00 2.24
838 868 2.726351 GCCGGCTCTCTTGGCTAGT 61.726 63.158 22.15 0.00 45.40 2.57
839 869 2.107953 GCCGGCTCTCTTGGCTAG 59.892 66.667 22.15 0.00 45.40 3.42
840 870 3.838271 CGCCGGCTCTCTTGGCTA 61.838 66.667 26.68 0.00 46.67 3.93
895 925 7.594351 TCTCTAGTGTGCTTTGATCTCATAT 57.406 36.000 0.00 0.00 0.00 1.78
960 990 6.244275 GTCAAGATGTTTCGCTTCAGAATAC 58.756 40.000 0.00 0.00 0.00 1.89
978 1008 2.484770 CCTGGTTGAAGAACGGTCAAGA 60.485 50.000 1.87 0.00 35.71 3.02
1009 1039 2.685380 CTTCCCCTGGCTCCTCGT 60.685 66.667 0.00 0.00 0.00 4.18
1011 1041 4.168291 CGCTTCCCCTGGCTCCTC 62.168 72.222 0.00 0.00 0.00 3.71
1147 1182 1.628846 GGGAGTCTTGGGCTTGAACTA 59.371 52.381 0.00 0.00 0.00 2.24
1246 1281 5.431731 TCAAAAATCTAGCAAGGATCCCCTA 59.568 40.000 8.55 6.20 43.48 3.53
1251 1286 7.622893 AGAAGTCAAAAATCTAGCAAGGATC 57.377 36.000 0.00 0.00 0.00 3.36
1272 1307 3.380004 TCAAGCTTTCTCGCCAAAAAGAA 59.620 39.130 0.00 0.00 35.02 2.52
1273 1308 2.948979 TCAAGCTTTCTCGCCAAAAAGA 59.051 40.909 0.00 0.00 35.02 2.52
1309 1346 4.970662 TTGCATTTCTGATCTACCAAGC 57.029 40.909 0.00 0.00 0.00 4.01
1368 1424 2.263077 CGATACTGCACTTCCACACTC 58.737 52.381 0.00 0.00 0.00 3.51
1373 1429 0.249120 CCCACGATACTGCACTTCCA 59.751 55.000 0.00 0.00 0.00 3.53
1374 1430 0.249398 ACCCACGATACTGCACTTCC 59.751 55.000 0.00 0.00 0.00 3.46
1375 1431 2.094762 AACCCACGATACTGCACTTC 57.905 50.000 0.00 0.00 0.00 3.01
1376 1432 2.565834 AGTAACCCACGATACTGCACTT 59.434 45.455 0.00 0.00 31.35 3.16
1377 1433 2.176889 AGTAACCCACGATACTGCACT 58.823 47.619 0.00 0.00 31.35 4.40
1378 1434 2.667473 AGTAACCCACGATACTGCAC 57.333 50.000 0.00 0.00 31.35 4.57
1379 1435 3.259876 AGAAAGTAACCCACGATACTGCA 59.740 43.478 0.00 0.00 32.84 4.41
1380 1436 3.858247 AGAAAGTAACCCACGATACTGC 58.142 45.455 0.00 0.00 32.84 4.40
1388 1444 4.134563 TGAGCAGAAAGAAAGTAACCCAC 58.865 43.478 0.00 0.00 0.00 4.61
1425 1481 1.052287 CAAATTTCGAAGTGCGTGCC 58.948 50.000 0.00 0.00 41.80 5.01
1466 1522 3.058983 GCAATATCACGATTCGATGGCAA 60.059 43.478 13.95 0.00 0.00 4.52
1481 1537 0.801251 GGCAGATCGGCAGCAATATC 59.199 55.000 19.63 0.00 40.76 1.63
1514 1571 0.315251 CTTGTCGCCTGACTGAGTCA 59.685 55.000 15.36 15.36 45.70 3.41
1516 1573 0.753262 AACTTGTCGCCTGACTGAGT 59.247 50.000 0.00 0.00 45.70 3.41
1549 1606 1.603456 TGCCTCGATTTGTTTCTGCA 58.397 45.000 0.00 0.00 0.00 4.41
1638 1697 6.912082 TGCGTCAACTAGTACACAAACTATA 58.088 36.000 0.00 0.00 31.70 1.31
1643 1702 4.449743 GGAATGCGTCAACTAGTACACAAA 59.550 41.667 0.00 0.00 0.00 2.83
1645 1704 3.257375 AGGAATGCGTCAACTAGTACACA 59.743 43.478 0.00 0.00 0.00 3.72
1646 1705 3.846360 AGGAATGCGTCAACTAGTACAC 58.154 45.455 0.00 0.00 0.00 2.90
1687 1746 1.753930 ATCAACCGAGCATGCATGAA 58.246 45.000 30.64 4.62 0.00 2.57
1705 1764 0.877071 CTGCAGTGCCGAACTCAAAT 59.123 50.000 13.72 0.00 36.83 2.32
1706 1765 0.179059 TCTGCAGTGCCGAACTCAAA 60.179 50.000 14.67 0.00 36.83 2.69
1707 1766 0.035317 ATCTGCAGTGCCGAACTCAA 59.965 50.000 14.67 0.00 36.83 3.02
1708 1767 0.671472 CATCTGCAGTGCCGAACTCA 60.671 55.000 14.67 0.00 36.83 3.41
1709 1768 1.975363 GCATCTGCAGTGCCGAACTC 61.975 60.000 22.83 2.32 36.83 3.01
1710 1769 2.037136 GCATCTGCAGTGCCGAACT 61.037 57.895 22.83 0.00 40.93 3.01
1711 1770 2.037136 AGCATCTGCAGTGCCGAAC 61.037 57.895 26.94 8.80 43.50 3.95
1712 1771 2.036571 CAGCATCTGCAGTGCCGAA 61.037 57.895 26.94 5.46 43.50 4.30
1713 1772 2.435410 CAGCATCTGCAGTGCCGA 60.435 61.111 26.94 12.74 43.50 5.54
1714 1773 2.745100 ACAGCATCTGCAGTGCCG 60.745 61.111 26.94 22.24 43.50 5.69
1715 1774 1.030488 ATGACAGCATCTGCAGTGCC 61.030 55.000 26.94 17.37 40.94 5.01
1716 1775 1.660167 TATGACAGCATCTGCAGTGC 58.340 50.000 24.74 24.74 40.94 4.40
1717 1776 2.548480 CCATATGACAGCATCTGCAGTG 59.452 50.000 14.67 12.33 40.94 3.66
1718 1777 2.436911 TCCATATGACAGCATCTGCAGT 59.563 45.455 14.67 2.06 43.60 4.40
1719 1778 2.806818 GTCCATATGACAGCATCTGCAG 59.193 50.000 7.63 7.63 43.85 4.41
1720 1779 2.486013 GGTCCATATGACAGCATCTGCA 60.486 50.000 3.65 0.00 46.38 4.41
1721 1780 2.149578 GGTCCATATGACAGCATCTGC 58.850 52.381 3.65 0.00 46.38 4.26
1722 1781 2.224137 ACGGTCCATATGACAGCATCTG 60.224 50.000 3.65 0.00 46.38 2.90
1723 1782 2.042464 ACGGTCCATATGACAGCATCT 58.958 47.619 3.65 0.00 46.38 2.90
1724 1783 2.533266 ACGGTCCATATGACAGCATC 57.467 50.000 3.65 0.00 46.38 3.91
1725 1784 2.564771 CAACGGTCCATATGACAGCAT 58.435 47.619 3.65 0.00 46.38 3.79
1726 1785 2.011548 GCAACGGTCCATATGACAGCA 61.012 52.381 3.65 0.00 46.38 4.41
1727 1786 0.657840 GCAACGGTCCATATGACAGC 59.342 55.000 3.65 0.00 46.38 4.40
1728 1787 2.022764 TGCAACGGTCCATATGACAG 57.977 50.000 3.65 4.33 46.38 3.51
1729 1788 2.170397 AGATGCAACGGTCCATATGACA 59.830 45.455 3.65 0.00 46.38 3.58
1730 1789 2.838736 AGATGCAACGGTCCATATGAC 58.161 47.619 3.65 0.59 43.67 3.06
1731 1790 3.558931 AAGATGCAACGGTCCATATGA 57.441 42.857 3.65 0.00 0.00 2.15
1732 1791 3.879295 AGAAAGATGCAACGGTCCATATG 59.121 43.478 0.00 0.00 0.00 1.78
1733 1792 4.156455 AGAAAGATGCAACGGTCCATAT 57.844 40.909 0.00 0.00 0.00 1.78
1734 1793 3.627395 AGAAAGATGCAACGGTCCATA 57.373 42.857 0.00 0.00 0.00 2.74
1735 1794 2.496899 AGAAAGATGCAACGGTCCAT 57.503 45.000 0.00 0.00 0.00 3.41
1736 1795 3.410631 TTAGAAAGATGCAACGGTCCA 57.589 42.857 0.00 0.00 0.00 4.02
1737 1796 3.312697 GGATTAGAAAGATGCAACGGTCC 59.687 47.826 0.00 0.00 0.00 4.46
1738 1797 3.938963 TGGATTAGAAAGATGCAACGGTC 59.061 43.478 0.00 0.00 0.00 4.79
1739 1798 3.950397 TGGATTAGAAAGATGCAACGGT 58.050 40.909 0.00 0.00 0.00 4.83
1740 1799 4.662145 GTTGGATTAGAAAGATGCAACGG 58.338 43.478 5.88 0.00 42.88 4.44
1742 1801 4.662145 CCGTTGGATTAGAAAGATGCAAC 58.338 43.478 10.26 10.26 46.15 4.17
1743 1802 3.128589 GCCGTTGGATTAGAAAGATGCAA 59.871 43.478 0.00 0.00 33.30 4.08
1744 1803 2.682856 GCCGTTGGATTAGAAAGATGCA 59.317 45.455 0.00 0.00 0.00 3.96
1745 1804 2.945668 AGCCGTTGGATTAGAAAGATGC 59.054 45.455 0.00 0.00 0.00 3.91
1746 1805 4.191544 TGAGCCGTTGGATTAGAAAGATG 58.808 43.478 0.00 0.00 0.00 2.90
1747 1806 4.487714 TGAGCCGTTGGATTAGAAAGAT 57.512 40.909 0.00 0.00 0.00 2.40
1748 1807 3.973206 TGAGCCGTTGGATTAGAAAGA 57.027 42.857 0.00 0.00 0.00 2.52
1749 1808 5.567138 ATTTGAGCCGTTGGATTAGAAAG 57.433 39.130 0.00 0.00 0.00 2.62
1750 1809 5.975693 AATTTGAGCCGTTGGATTAGAAA 57.024 34.783 0.00 0.00 0.00 2.52
1751 1810 5.975693 AAATTTGAGCCGTTGGATTAGAA 57.024 34.783 0.00 0.00 0.00 2.10
1752 1811 6.093495 CACTAAATTTGAGCCGTTGGATTAGA 59.907 38.462 0.00 0.00 0.00 2.10
1753 1812 6.258160 CACTAAATTTGAGCCGTTGGATTAG 58.742 40.000 0.00 0.00 0.00 1.73
1754 1813 5.124776 CCACTAAATTTGAGCCGTTGGATTA 59.875 40.000 0.00 0.00 0.00 1.75
1755 1814 4.082245 CCACTAAATTTGAGCCGTTGGATT 60.082 41.667 0.00 0.00 0.00 3.01
1756 1815 3.443681 CCACTAAATTTGAGCCGTTGGAT 59.556 43.478 0.00 0.00 0.00 3.41
1757 1816 2.817258 CCACTAAATTTGAGCCGTTGGA 59.183 45.455 0.00 0.00 0.00 3.53
1758 1817 2.671070 GCCACTAAATTTGAGCCGTTGG 60.671 50.000 0.00 0.66 0.00 3.77
1759 1818 2.228822 AGCCACTAAATTTGAGCCGTTG 59.771 45.455 0.00 0.00 0.00 4.10
1760 1819 2.514803 AGCCACTAAATTTGAGCCGTT 58.485 42.857 0.00 0.00 0.00 4.44
1761 1820 2.200373 AGCCACTAAATTTGAGCCGT 57.800 45.000 0.00 0.00 0.00 5.68
1762 1821 2.228822 ACAAGCCACTAAATTTGAGCCG 59.771 45.455 0.00 0.00 0.00 5.52
1763 1822 3.578688 CACAAGCCACTAAATTTGAGCC 58.421 45.455 0.00 0.00 0.00 4.70
1764 1823 2.989166 GCACAAGCCACTAAATTTGAGC 59.011 45.455 0.00 0.00 31.92 4.26
1765 1824 4.510038 AGCACAAGCCACTAAATTTGAG 57.490 40.909 0.00 0.00 43.56 3.02
1766 1825 6.264292 TCTTTAGCACAAGCCACTAAATTTGA 59.736 34.615 0.00 0.00 43.56 2.69
1767 1826 6.446318 TCTTTAGCACAAGCCACTAAATTTG 58.554 36.000 0.00 0.00 43.56 2.32
1768 1827 6.648879 TCTTTAGCACAAGCCACTAAATTT 57.351 33.333 0.00 0.00 43.56 1.82
1769 1828 6.447162 GTTCTTTAGCACAAGCCACTAAATT 58.553 36.000 0.00 0.00 43.56 1.82
1770 1829 5.048013 GGTTCTTTAGCACAAGCCACTAAAT 60.048 40.000 0.00 0.00 43.56 1.40
1771 1830 4.277423 GGTTCTTTAGCACAAGCCACTAAA 59.723 41.667 0.00 0.00 43.56 1.85
1772 1831 3.818773 GGTTCTTTAGCACAAGCCACTAA 59.181 43.478 0.00 0.00 43.56 2.24
1773 1832 3.181449 TGGTTCTTTAGCACAAGCCACTA 60.181 43.478 0.00 0.00 43.56 2.74
1774 1833 2.230660 GGTTCTTTAGCACAAGCCACT 58.769 47.619 0.00 0.00 43.56 4.00
1775 1834 1.953686 TGGTTCTTTAGCACAAGCCAC 59.046 47.619 0.00 0.00 43.56 5.01
1776 1835 2.356665 TGGTTCTTTAGCACAAGCCA 57.643 45.000 0.00 0.00 43.56 4.75
1793 1852 3.635331 CGGTCTATATACAACCACGTGG 58.365 50.000 32.83 32.83 42.17 4.94
1794 1853 3.047796 GCGGTCTATATACAACCACGTG 58.952 50.000 9.08 9.08 32.35 4.49
1795 1854 2.954318 AGCGGTCTATATACAACCACGT 59.046 45.455 9.27 0.00 32.35 4.49
1796 1855 3.637998 AGCGGTCTATATACAACCACG 57.362 47.619 9.27 0.00 32.35 4.94
1797 1856 5.954296 TCTAGCGGTCTATATACAACCAC 57.046 43.478 0.00 1.59 32.35 4.16
1798 1857 7.832685 ACATATCTAGCGGTCTATATACAACCA 59.167 37.037 0.00 0.00 32.35 3.67
1799 1858 8.223177 ACATATCTAGCGGTCTATATACAACC 57.777 38.462 0.00 1.00 0.00 3.77
1800 1859 8.890718 TGACATATCTAGCGGTCTATATACAAC 58.109 37.037 0.00 0.00 0.00 3.32
1801 1860 9.457436 TTGACATATCTAGCGGTCTATATACAA 57.543 33.333 0.00 4.15 0.00 2.41
1802 1861 9.628500 ATTGACATATCTAGCGGTCTATATACA 57.372 33.333 0.00 0.00 0.00 2.29
1805 1864 8.988546 AGATTGACATATCTAGCGGTCTATAT 57.011 34.615 0.00 0.00 33.17 0.86
1806 1865 9.901172 TTAGATTGACATATCTAGCGGTCTATA 57.099 33.333 0.00 0.00 38.13 1.31
1807 1866 8.679100 GTTAGATTGACATATCTAGCGGTCTAT 58.321 37.037 0.00 0.00 38.13 1.98
1808 1867 8.041829 GTTAGATTGACATATCTAGCGGTCTA 57.958 38.462 0.00 0.00 38.13 2.59
1809 1868 6.915349 GTTAGATTGACATATCTAGCGGTCT 58.085 40.000 0.00 0.00 38.13 3.85
1814 1873 6.915349 AGACCGTTAGATTGACATATCTAGC 58.085 40.000 0.00 0.00 38.13 3.42
1815 1874 9.000486 TGTAGACCGTTAGATTGACATATCTAG 58.000 37.037 0.00 0.00 38.13 2.43
1816 1875 8.913487 TGTAGACCGTTAGATTGACATATCTA 57.087 34.615 0.00 0.00 36.34 1.98
1817 1876 7.818997 TGTAGACCGTTAGATTGACATATCT 57.181 36.000 0.00 0.00 38.41 1.98
1818 1877 8.916654 CATTGTAGACCGTTAGATTGACATATC 58.083 37.037 0.00 0.00 0.00 1.63
1819 1878 7.385205 GCATTGTAGACCGTTAGATTGACATAT 59.615 37.037 0.00 0.00 0.00 1.78
1820 1879 6.700081 GCATTGTAGACCGTTAGATTGACATA 59.300 38.462 0.00 0.00 0.00 2.29
1821 1880 5.523916 GCATTGTAGACCGTTAGATTGACAT 59.476 40.000 0.00 0.00 0.00 3.06
1822 1881 4.868171 GCATTGTAGACCGTTAGATTGACA 59.132 41.667 0.00 0.00 0.00 3.58
1823 1882 4.868171 TGCATTGTAGACCGTTAGATTGAC 59.132 41.667 0.00 0.00 0.00 3.18
1824 1883 5.079689 TGCATTGTAGACCGTTAGATTGA 57.920 39.130 0.00 0.00 0.00 2.57
1825 1884 4.271049 CCTGCATTGTAGACCGTTAGATTG 59.729 45.833 3.03 0.00 0.00 2.67
1826 1885 4.442706 CCTGCATTGTAGACCGTTAGATT 58.557 43.478 3.03 0.00 0.00 2.40
1827 1886 3.181465 CCCTGCATTGTAGACCGTTAGAT 60.181 47.826 3.03 0.00 0.00 1.98
1828 1887 2.167693 CCCTGCATTGTAGACCGTTAGA 59.832 50.000 3.03 0.00 0.00 2.10
1829 1888 2.167693 TCCCTGCATTGTAGACCGTTAG 59.832 50.000 3.03 0.00 0.00 2.34
1830 1889 2.181125 TCCCTGCATTGTAGACCGTTA 58.819 47.619 3.03 0.00 0.00 3.18
1831 1890 0.981183 TCCCTGCATTGTAGACCGTT 59.019 50.000 3.03 0.00 0.00 4.44
1832 1891 1.204146 ATCCCTGCATTGTAGACCGT 58.796 50.000 3.03 0.00 0.00 4.83
1833 1892 2.213499 GAATCCCTGCATTGTAGACCG 58.787 52.381 3.03 0.00 0.00 4.79
1834 1893 2.213499 CGAATCCCTGCATTGTAGACC 58.787 52.381 3.03 0.00 0.00 3.85
1835 1894 1.599542 GCGAATCCCTGCATTGTAGAC 59.400 52.381 3.03 0.00 0.00 2.59
1836 1895 1.209261 TGCGAATCCCTGCATTGTAGA 59.791 47.619 3.03 0.00 35.90 2.59
1837 1896 1.600957 CTGCGAATCCCTGCATTGTAG 59.399 52.381 0.00 0.00 40.89 2.74
1838 1897 1.667236 CTGCGAATCCCTGCATTGTA 58.333 50.000 0.00 0.00 40.89 2.41
1839 1898 1.033746 CCTGCGAATCCCTGCATTGT 61.034 55.000 0.00 0.00 40.89 2.71
1840 1899 1.731433 CCCTGCGAATCCCTGCATTG 61.731 60.000 0.00 0.00 40.89 2.82
1841 1900 1.454479 CCCTGCGAATCCCTGCATT 60.454 57.895 0.00 0.00 40.89 3.56
1842 1901 2.194056 CCCTGCGAATCCCTGCAT 59.806 61.111 0.00 0.00 40.89 3.96
1843 1902 4.802051 GCCCTGCGAATCCCTGCA 62.802 66.667 0.00 0.00 39.13 4.41
1862 1921 3.292481 ATGGCAGCACAGGAAGGGG 62.292 63.158 0.00 0.00 0.00 4.79
1863 1922 1.751927 GATGGCAGCACAGGAAGGG 60.752 63.158 0.00 0.00 0.00 3.95
1864 1923 1.751927 GGATGGCAGCACAGGAAGG 60.752 63.158 4.64 0.00 0.00 3.46
1865 1924 1.030488 CAGGATGGCAGCACAGGAAG 61.030 60.000 4.64 0.00 0.00 3.46
1866 1925 1.001764 CAGGATGGCAGCACAGGAA 60.002 57.895 4.64 0.00 0.00 3.36
1867 1926 2.672908 CAGGATGGCAGCACAGGA 59.327 61.111 4.64 0.00 0.00 3.86
1878 1937 2.131405 ATCCGAGAGTGCCAGGATG 58.869 57.895 0.00 0.00 41.51 3.51
1879 1938 2.037620 GCATCCGAGAGTGCCAGGAT 62.038 60.000 0.00 0.00 43.66 3.24
1880 1939 2.725312 GCATCCGAGAGTGCCAGGA 61.725 63.158 0.00 0.00 35.35 3.86
1881 1940 2.202987 GCATCCGAGAGTGCCAGG 60.203 66.667 0.00 0.00 35.35 4.45
1882 1941 1.521010 CTGCATCCGAGAGTGCCAG 60.521 63.158 0.00 0.00 40.56 4.85
1883 1942 1.830587 AACTGCATCCGAGAGTGCCA 61.831 55.000 0.00 0.00 40.56 4.92
1884 1943 0.674895 AAACTGCATCCGAGAGTGCC 60.675 55.000 0.00 0.00 40.56 5.01
1885 1944 0.445436 CAAACTGCATCCGAGAGTGC 59.555 55.000 0.00 0.00 41.61 4.40
1886 1945 1.800805 ACAAACTGCATCCGAGAGTG 58.199 50.000 0.00 0.00 0.00 3.51
1887 1946 2.093973 CCTACAAACTGCATCCGAGAGT 60.094 50.000 0.00 0.00 0.00 3.24
1888 1947 2.544685 CCTACAAACTGCATCCGAGAG 58.455 52.381 0.00 0.00 0.00 3.20
1889 1948 1.207089 CCCTACAAACTGCATCCGAGA 59.793 52.381 0.00 0.00 0.00 4.04
1890 1949 1.066143 ACCCTACAAACTGCATCCGAG 60.066 52.381 0.00 0.00 0.00 4.63
1891 1950 0.981183 ACCCTACAAACTGCATCCGA 59.019 50.000 0.00 0.00 0.00 4.55
1892 1951 1.338674 TGACCCTACAAACTGCATCCG 60.339 52.381 0.00 0.00 0.00 4.18
1893 1952 2.084546 GTGACCCTACAAACTGCATCC 58.915 52.381 0.00 0.00 0.00 3.51
1894 1953 2.744202 CAGTGACCCTACAAACTGCATC 59.256 50.000 0.00 0.00 34.19 3.91
1895 1954 2.783135 CAGTGACCCTACAAACTGCAT 58.217 47.619 0.00 0.00 34.19 3.96
1896 1955 2.254546 CAGTGACCCTACAAACTGCA 57.745 50.000 0.00 0.00 34.19 4.41
1898 1957 1.202758 TGGCAGTGACCCTACAAACTG 60.203 52.381 0.00 0.00 42.35 3.16
1899 1958 1.136828 TGGCAGTGACCCTACAAACT 58.863 50.000 0.00 0.00 0.00 2.66
1900 1959 2.084546 GATGGCAGTGACCCTACAAAC 58.915 52.381 0.00 0.00 0.00 2.93
1901 1960 1.004277 GGATGGCAGTGACCCTACAAA 59.996 52.381 0.00 0.00 0.00 2.83
1902 1961 0.618458 GGATGGCAGTGACCCTACAA 59.382 55.000 0.00 0.00 0.00 2.41
1903 1962 1.271840 GGGATGGCAGTGACCCTACA 61.272 60.000 12.44 0.00 39.28 2.74
1904 1963 1.527370 GGGATGGCAGTGACCCTAC 59.473 63.158 12.44 0.00 39.28 3.18
1905 1964 1.692749 GGGGATGGCAGTGACCCTA 60.693 63.158 17.01 0.00 41.79 3.53
1906 1965 3.017581 GGGGATGGCAGTGACCCT 61.018 66.667 17.01 0.00 41.79 4.34
1907 1966 2.439553 TTTGGGGATGGCAGTGACCC 62.440 60.000 10.57 10.57 41.84 4.46
1908 1967 0.324645 ATTTGGGGATGGCAGTGACC 60.325 55.000 0.00 0.00 0.00 4.02
1909 1968 1.560505 AATTTGGGGATGGCAGTGAC 58.439 50.000 0.00 0.00 0.00 3.67
1910 1969 2.178580 GAAATTTGGGGATGGCAGTGA 58.821 47.619 0.00 0.00 0.00 3.41
1911 1970 2.181975 AGAAATTTGGGGATGGCAGTG 58.818 47.619 0.00 0.00 0.00 3.66
1912 1971 2.629017 AGAAATTTGGGGATGGCAGT 57.371 45.000 0.00 0.00 0.00 4.40
1913 1972 2.363359 GCTAGAAATTTGGGGATGGCAG 59.637 50.000 0.00 0.00 0.00 4.85
1914 1973 2.292126 TGCTAGAAATTTGGGGATGGCA 60.292 45.455 0.00 0.00 0.00 4.92
1915 1974 2.363359 CTGCTAGAAATTTGGGGATGGC 59.637 50.000 0.00 0.00 0.00 4.40
1916 1975 3.633986 GTCTGCTAGAAATTTGGGGATGG 59.366 47.826 0.00 0.00 0.00 3.51
1917 1976 4.530875 AGTCTGCTAGAAATTTGGGGATG 58.469 43.478 0.00 0.00 0.00 3.51
1918 1977 4.476479 AGAGTCTGCTAGAAATTTGGGGAT 59.524 41.667 0.00 0.00 0.00 3.85
1919 1978 3.846588 AGAGTCTGCTAGAAATTTGGGGA 59.153 43.478 0.00 0.00 0.00 4.81
1920 1979 4.195416 GAGAGTCTGCTAGAAATTTGGGG 58.805 47.826 0.00 0.00 0.00 4.96
1921 1980 3.868077 CGAGAGTCTGCTAGAAATTTGGG 59.132 47.826 0.00 0.00 0.00 4.12
1922 1981 4.499183 ACGAGAGTCTGCTAGAAATTTGG 58.501 43.478 0.00 0.00 44.19 3.28
1938 1997 1.863454 GCATGCATTCTACCACGAGAG 59.137 52.381 14.21 0.00 0.00 3.20
1939 1998 1.206849 TGCATGCATTCTACCACGAGA 59.793 47.619 18.46 0.00 0.00 4.04
1940 1999 1.596260 CTGCATGCATTCTACCACGAG 59.404 52.381 22.97 0.21 0.00 4.18
1941 2000 1.655484 CTGCATGCATTCTACCACGA 58.345 50.000 22.97 0.00 0.00 4.35
1942 2001 0.028505 GCTGCATGCATTCTACCACG 59.971 55.000 22.97 7.15 42.31 4.94
1943 2002 0.028505 CGCTGCATGCATTCTACCAC 59.971 55.000 22.97 2.74 43.06 4.16
1944 2003 0.107752 TCGCTGCATGCATTCTACCA 60.108 50.000 22.97 0.00 43.06 3.25
1945 2004 1.233019 ATCGCTGCATGCATTCTACC 58.767 50.000 22.97 4.83 43.06 3.18
1946 2005 4.867047 ACTATATCGCTGCATGCATTCTAC 59.133 41.667 22.97 7.72 43.06 2.59
1947 2006 5.077134 ACTATATCGCTGCATGCATTCTA 57.923 39.130 22.97 10.96 43.06 2.10
1948 2007 3.935315 ACTATATCGCTGCATGCATTCT 58.065 40.909 22.97 9.01 43.06 2.40
1949 2008 4.260132 GCTACTATATCGCTGCATGCATTC 60.260 45.833 22.97 14.95 43.06 2.67
1950 2009 3.620374 GCTACTATATCGCTGCATGCATT 59.380 43.478 22.97 9.19 43.06 3.56
1951 2010 3.193263 GCTACTATATCGCTGCATGCAT 58.807 45.455 22.97 9.00 43.06 3.96
1952 2011 2.029110 TGCTACTATATCGCTGCATGCA 60.029 45.455 21.29 21.29 43.06 3.96
1953 2012 2.610433 TGCTACTATATCGCTGCATGC 58.390 47.619 11.82 11.82 38.57 4.06
1954 2013 4.240888 AGTTGCTACTATATCGCTGCATG 58.759 43.478 0.00 0.00 31.21 4.06
1955 2014 4.527509 AGTTGCTACTATATCGCTGCAT 57.472 40.909 0.00 0.00 31.21 3.96
1956 2015 4.519350 AGTAGTTGCTACTATATCGCTGCA 59.481 41.667 11.20 0.00 44.35 4.41
1957 2016 5.049398 AGTAGTTGCTACTATATCGCTGC 57.951 43.478 11.20 0.00 44.35 5.25
1958 2017 5.392165 GGGAGTAGTTGCTACTATATCGCTG 60.392 48.000 21.27 0.00 45.90 5.18
1959 2018 4.701171 GGGAGTAGTTGCTACTATATCGCT 59.299 45.833 21.27 11.68 45.90 4.93
1960 2019 4.701171 AGGGAGTAGTTGCTACTATATCGC 59.299 45.833 21.13 21.13 45.90 4.58
1961 2020 6.402334 CGAAGGGAGTAGTTGCTACTATATCG 60.402 46.154 11.20 10.61 45.90 2.92
1962 2021 6.430616 ACGAAGGGAGTAGTTGCTACTATATC 59.569 42.308 11.20 11.74 45.90 1.63
1963 2022 6.305411 ACGAAGGGAGTAGTTGCTACTATAT 58.695 40.000 11.20 3.80 45.90 0.86
1964 2023 5.688807 ACGAAGGGAGTAGTTGCTACTATA 58.311 41.667 11.20 0.00 45.90 1.31
1965 2024 4.534797 ACGAAGGGAGTAGTTGCTACTAT 58.465 43.478 11.20 1.34 45.90 2.12
1966 2025 3.944015 GACGAAGGGAGTAGTTGCTACTA 59.056 47.826 3.76 3.76 45.90 1.82
1968 2027 2.159268 GGACGAAGGGAGTAGTTGCTAC 60.159 54.545 0.00 0.00 37.23 3.58
1969 2028 2.097825 GGACGAAGGGAGTAGTTGCTA 58.902 52.381 0.00 0.00 0.00 3.49
1970 2029 0.896226 GGACGAAGGGAGTAGTTGCT 59.104 55.000 0.00 0.00 0.00 3.91
1971 2030 0.458025 CGGACGAAGGGAGTAGTTGC 60.458 60.000 0.00 0.00 0.00 4.17
1972 2031 0.172803 CCGGACGAAGGGAGTAGTTG 59.827 60.000 0.00 0.00 0.00 3.16
1973 2032 0.038744 TCCGGACGAAGGGAGTAGTT 59.961 55.000 0.00 0.00 0.00 2.24
1974 2033 0.038744 TTCCGGACGAAGGGAGTAGT 59.961 55.000 1.83 0.00 33.01 2.73
1975 2034 1.400737 ATTCCGGACGAAGGGAGTAG 58.599 55.000 1.83 0.00 32.78 2.57
1976 2035 1.856629 AATTCCGGACGAAGGGAGTA 58.143 50.000 1.83 0.00 32.78 2.59
1977 2036 1.479730 GTAATTCCGGACGAAGGGAGT 59.520 52.381 1.83 0.00 32.78 3.85
1978 2037 1.755380 AGTAATTCCGGACGAAGGGAG 59.245 52.381 1.83 0.00 32.78 4.30
1979 2038 1.856629 AGTAATTCCGGACGAAGGGA 58.143 50.000 1.83 0.00 32.78 4.20
1980 2039 2.277084 CAAGTAATTCCGGACGAAGGG 58.723 52.381 1.83 0.00 32.78 3.95
1981 2040 2.928116 GACAAGTAATTCCGGACGAAGG 59.072 50.000 1.83 0.00 32.78 3.46
1982 2041 2.597305 CGACAAGTAATTCCGGACGAAG 59.403 50.000 1.83 0.00 32.78 3.79
1983 2042 2.598589 CGACAAGTAATTCCGGACGAA 58.401 47.619 1.83 0.00 34.14 3.85
1984 2043 1.733389 GCGACAAGTAATTCCGGACGA 60.733 52.381 1.83 0.00 0.00 4.20
1985 2044 0.643820 GCGACAAGTAATTCCGGACG 59.356 55.000 1.83 1.53 0.00 4.79
1986 2045 1.717194 TGCGACAAGTAATTCCGGAC 58.283 50.000 1.83 0.00 0.00 4.79
1987 2046 2.684001 ATGCGACAAGTAATTCCGGA 57.316 45.000 0.00 0.00 0.00 5.14
1988 2047 4.868450 TTTATGCGACAAGTAATTCCGG 57.132 40.909 0.00 0.00 0.00 5.14
1989 2048 6.043327 TCATTTATGCGACAAGTAATTCCG 57.957 37.500 0.00 0.00 0.00 4.30
1990 2049 8.128582 TCATTCATTTATGCGACAAGTAATTCC 58.871 33.333 0.00 0.00 0.00 3.01
1991 2050 9.502145 TTCATTCATTTATGCGACAAGTAATTC 57.498 29.630 0.00 0.00 0.00 2.17
1992 2051 9.853555 TTTCATTCATTTATGCGACAAGTAATT 57.146 25.926 0.00 0.00 0.00 1.40
1993 2052 9.853555 TTTTCATTCATTTATGCGACAAGTAAT 57.146 25.926 0.00 0.00 0.00 1.89
1994 2053 9.853555 ATTTTCATTCATTTATGCGACAAGTAA 57.146 25.926 0.00 0.00 0.00 2.24
1995 2054 9.288124 CATTTTCATTCATTTATGCGACAAGTA 57.712 29.630 0.00 0.00 0.00 2.24
1996 2055 8.028354 TCATTTTCATTCATTTATGCGACAAGT 58.972 29.630 0.00 0.00 0.00 3.16
1997 2056 8.397215 TCATTTTCATTCATTTATGCGACAAG 57.603 30.769 0.00 0.00 0.00 3.16
1998 2057 8.754230 TTCATTTTCATTCATTTATGCGACAA 57.246 26.923 0.00 0.00 0.00 3.18
1999 2058 8.809478 CATTCATTTTCATTCATTTATGCGACA 58.191 29.630 0.00 0.00 0.00 4.35
2000 2059 8.810427 ACATTCATTTTCATTCATTTATGCGAC 58.190 29.630 0.00 0.00 0.00 5.19
2001 2060 8.929827 ACATTCATTTTCATTCATTTATGCGA 57.070 26.923 0.00 0.00 0.00 5.10
2060 2119 5.972382 CCGTCCGAAAATACTTGTTGAAAAA 59.028 36.000 0.00 0.00 0.00 1.94
2061 2120 5.296283 TCCGTCCGAAAATACTTGTTGAAAA 59.704 36.000 0.00 0.00 0.00 2.29
2062 2121 4.815308 TCCGTCCGAAAATACTTGTTGAAA 59.185 37.500 0.00 0.00 0.00 2.69
2063 2122 4.378774 TCCGTCCGAAAATACTTGTTGAA 58.621 39.130 0.00 0.00 0.00 2.69
2064 2123 3.991773 CTCCGTCCGAAAATACTTGTTGA 59.008 43.478 0.00 0.00 0.00 3.18
2065 2124 3.124636 CCTCCGTCCGAAAATACTTGTTG 59.875 47.826 0.00 0.00 0.00 3.33
2066 2125 3.332034 CCTCCGTCCGAAAATACTTGTT 58.668 45.455 0.00 0.00 0.00 2.83
2067 2126 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2068 2127 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2069 2128 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2070 2129 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2071 2130 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2072 2131 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2073 2132 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
2074 2133 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2075 2134 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2076 2135 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
2077 2136 0.467384 CTAGTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
2078 2137 1.165284 GCTAGTACTCCCTCCGTCCG 61.165 65.000 0.00 0.00 0.00 4.79
2079 2138 0.106819 TGCTAGTACTCCCTCCGTCC 60.107 60.000 0.00 0.00 0.00 4.79
2080 2139 1.677052 CTTGCTAGTACTCCCTCCGTC 59.323 57.143 0.00 0.00 0.00 4.79
2081 2140 1.765230 CTTGCTAGTACTCCCTCCGT 58.235 55.000 0.00 0.00 0.00 4.69
2082 2141 0.386113 GCTTGCTAGTACTCCCTCCG 59.614 60.000 0.00 0.00 0.00 4.63
2083 2142 1.783071 AGCTTGCTAGTACTCCCTCC 58.217 55.000 0.00 0.00 0.00 4.30
2084 2143 2.624364 GGTAGCTTGCTAGTACTCCCTC 59.376 54.545 0.00 0.00 0.00 4.30
2085 2144 2.024273 TGGTAGCTTGCTAGTACTCCCT 60.024 50.000 0.00 0.00 0.00 4.20
2086 2145 2.385803 TGGTAGCTTGCTAGTACTCCC 58.614 52.381 0.00 0.77 0.00 4.30
2087 2146 3.447944 ACTTGGTAGCTTGCTAGTACTCC 59.552 47.826 0.00 1.44 0.00 3.85
2088 2147 4.674475 GACTTGGTAGCTTGCTAGTACTC 58.326 47.826 0.00 0.00 0.00 2.59
2089 2148 3.128938 CGACTTGGTAGCTTGCTAGTACT 59.871 47.826 0.00 0.00 0.00 2.73
2090 2149 3.436496 CGACTTGGTAGCTTGCTAGTAC 58.564 50.000 2.20 0.00 0.00 2.73
2091 2150 2.426024 CCGACTTGGTAGCTTGCTAGTA 59.574 50.000 2.20 0.00 0.00 1.82
2092 2151 1.204941 CCGACTTGGTAGCTTGCTAGT 59.795 52.381 2.20 0.00 0.00 2.57
2093 2152 1.927895 CCGACTTGGTAGCTTGCTAG 58.072 55.000 2.20 0.00 0.00 3.42
2094 2153 0.108329 GCCGACTTGGTAGCTTGCTA 60.108 55.000 0.00 0.00 41.21 3.49
2095 2154 1.376037 GCCGACTTGGTAGCTTGCT 60.376 57.895 0.00 0.00 41.21 3.91
2096 2155 1.026718 ATGCCGACTTGGTAGCTTGC 61.027 55.000 0.00 0.00 41.21 4.01
2097 2156 1.009829 GATGCCGACTTGGTAGCTTG 58.990 55.000 0.00 0.00 41.21 4.01
2098 2157 0.613260 TGATGCCGACTTGGTAGCTT 59.387 50.000 0.00 0.00 39.78 3.74
2099 2158 0.833287 ATGATGCCGACTTGGTAGCT 59.167 50.000 0.00 0.00 39.78 3.32
2100 2159 1.668419 AATGATGCCGACTTGGTAGC 58.332 50.000 0.00 0.00 39.47 3.58
2101 2160 4.997905 CATAATGATGCCGACTTGGTAG 57.002 45.455 0.00 0.00 41.21 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.