Multiple sequence alignment - TraesCS3B01G289600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G289600 chr3B 100.000 3557 0 0 1 3557 464693114 464696670 0.000000e+00 6569.0
1 TraesCS3B01G289600 chr3B 100.000 1631 0 0 3898 5528 464697011 464698641 0.000000e+00 3013.0
2 TraesCS3B01G289600 chr3B 92.035 226 16 2 4948 5171 92945705 92945480 3.210000e-82 316.0
3 TraesCS3B01G289600 chr3B 92.202 218 17 0 4954 5171 91044140 91043923 5.380000e-80 309.0
4 TraesCS3B01G289600 chr3B 91.705 217 18 0 4955 5171 500284146 500284362 9.000000e-78 302.0
5 TraesCS3B01G289600 chr3B 91.284 218 19 0 4954 5171 177421591 177421808 1.160000e-76 298.0
6 TraesCS3B01G289600 chr3B 88.832 197 18 3 4992 5187 637295927 637295734 7.160000e-59 239.0
7 TraesCS3B01G289600 chr3B 87.895 190 18 5 4992 5179 628637513 628637699 9.320000e-53 219.0
8 TraesCS3B01G289600 chr3D 93.923 2715 103 31 713 3403 358678807 358681483 0.000000e+00 4043.0
9 TraesCS3B01G289600 chr3D 93.648 976 27 9 3957 4914 358681488 358682446 0.000000e+00 1426.0
10 TraesCS3B01G289600 chr3D 91.231 707 47 9 1 706 42476686 42477378 0.000000e+00 948.0
11 TraesCS3B01G289600 chr3A 95.212 1671 53 14 710 2354 478253488 478255157 0.000000e+00 2617.0
12 TraesCS3B01G289600 chr3A 94.913 865 28 8 3984 4832 478256699 478257563 0.000000e+00 1339.0
13 TraesCS3B01G289600 chr3A 91.926 706 44 8 1 704 746537571 746536877 0.000000e+00 976.0
14 TraesCS3B01G289600 chr3A 90.997 622 23 14 2879 3500 478256110 478256698 0.000000e+00 808.0
15 TraesCS3B01G289600 chr3A 88.235 561 36 15 2340 2875 478255174 478255729 1.300000e-180 643.0
16 TraesCS3B01G289600 chr3A 88.398 362 39 3 5169 5528 478257917 478258277 3.060000e-117 433.0
17 TraesCS3B01G289600 chr3A 96.154 78 3 0 4868 4945 478257834 478257911 1.620000e-25 128.0
18 TraesCS3B01G289600 chr3A 92.105 76 3 1 4823 4898 478257762 478257834 2.720000e-18 104.0
19 TraesCS3B01G289600 chr2A 91.525 708 47 7 1 705 46355253 46354556 0.000000e+00 963.0
20 TraesCS3B01G289600 chr2A 90.780 705 51 7 1 704 177948667 177949358 0.000000e+00 929.0
21 TraesCS3B01G289600 chr7A 91.231 707 49 8 1 705 648680515 648679820 0.000000e+00 950.0
22 TraesCS3B01G289600 chr5A 90.832 709 54 7 1 707 483539328 483540027 0.000000e+00 939.0
23 TraesCS3B01G289600 chr4A 90.935 706 51 7 1 704 374638824 374639518 0.000000e+00 937.0
24 TraesCS3B01G289600 chr4A 90.516 717 55 8 1 716 122967765 122967061 0.000000e+00 935.0
25 TraesCS3B01G289600 chr4A 90.537 708 50 11 1 705 26679312 26680005 0.000000e+00 920.0
26 TraesCS3B01G289600 chr2B 93.119 218 15 0 4954 5171 553844852 553845069 2.480000e-83 320.0
27 TraesCS3B01G289600 chr1D 87.050 278 33 3 5243 5519 41452234 41452509 1.500000e-80 311.0
28 TraesCS3B01G289600 chr1B 92.237 219 16 1 4954 5171 535976897 535977115 5.380000e-80 309.0
29 TraesCS3B01G289600 chr1B 92.202 218 16 1 4954 5171 67779528 67779744 1.930000e-79 307.0
30 TraesCS3B01G289600 chr1B 91.781 219 17 1 4954 5171 536039578 536039796 2.500000e-78 303.0
31 TraesCS3B01G289600 chr1B 84.559 272 37 3 5251 5519 61413160 61413429 1.180000e-66 265.0
32 TraesCS3B01G289600 chr1B 85.600 250 32 3 5251 5496 61434955 61435204 5.490000e-65 259.0
33 TraesCS3B01G289600 chr1B 100.000 29 0 0 3445 3473 487806536 487806508 3.000000e-03 54.7
34 TraesCS3B01G289600 chr4B 91.855 221 17 1 4952 5171 566411528 566411748 1.930000e-79 307.0
35 TraesCS3B01G289600 chr4B 87.565 193 21 3 4992 5183 501878416 501878226 2.590000e-53 220.0
36 TraesCS3B01G289600 chr4B 86.979 192 21 4 4994 5184 431044508 431044320 4.340000e-51 213.0
37 TraesCS3B01G289600 chr4B 75.455 220 51 3 5311 5528 509763568 509763786 2.720000e-18 104.0
38 TraesCS3B01G289600 chr4B 100.000 29 0 0 3445 3473 333980148 333980176 3.000000e-03 54.7
39 TraesCS3B01G289600 chr7B 81.006 358 56 12 5176 5528 552847775 552847425 1.960000e-69 274.0
40 TraesCS3B01G289600 chr7D 90.674 193 15 3 4992 5184 63392446 63392257 2.560000e-63 254.0
41 TraesCS3B01G289600 chr7D 89.286 196 19 2 4992 5186 263349293 263349487 1.540000e-60 244.0
42 TraesCS3B01G289600 chr1A 83.582 268 41 2 5253 5519 41706613 41706348 1.190000e-61 248.0
43 TraesCS3B01G289600 chr1A 86.538 208 24 4 5313 5519 41520303 41520099 5.570000e-55 226.0
44 TraesCS3B01G289600 chr1A 87.755 196 21 3 4992 5186 48126799 48126606 5.570000e-55 226.0
45 TraesCS3B01G289600 chr1A 77.255 255 41 9 5169 5413 93685372 93685125 3.470000e-27 134.0
46 TraesCS3B01G289600 chr2D 90.659 182 16 1 4992 5173 236283213 236283393 1.990000e-59 241.0
47 TraesCS3B01G289600 chr2D 88.889 189 17 3 4992 5178 114845734 114845920 4.310000e-56 230.0
48 TraesCS3B01G289600 chr5D 86.207 58 6 2 5170 5226 454925715 454925771 1.660000e-05 62.1
49 TraesCS3B01G289600 chr5D 92.500 40 3 0 3434 3473 84800745 84800784 2.150000e-04 58.4
50 TraesCS3B01G289600 chr6B 92.683 41 1 2 5170 5209 673449709 673449670 2.150000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G289600 chr3B 464693114 464698641 5527 False 4791.000000 6569 100.000000 1 5528 2 chr3B.!!$F4 5527
1 TraesCS3B01G289600 chr3D 358678807 358682446 3639 False 2734.500000 4043 93.785500 713 4914 2 chr3D.!!$F2 4201
2 TraesCS3B01G289600 chr3D 42476686 42477378 692 False 948.000000 948 91.231000 1 706 1 chr3D.!!$F1 705
3 TraesCS3B01G289600 chr3A 746536877 746537571 694 True 976.000000 976 91.926000 1 704 1 chr3A.!!$R1 703
4 TraesCS3B01G289600 chr3A 478253488 478258277 4789 False 867.428571 2617 92.287714 710 5528 7 chr3A.!!$F1 4818
5 TraesCS3B01G289600 chr2A 46354556 46355253 697 True 963.000000 963 91.525000 1 705 1 chr2A.!!$R1 704
6 TraesCS3B01G289600 chr2A 177948667 177949358 691 False 929.000000 929 90.780000 1 704 1 chr2A.!!$F1 703
7 TraesCS3B01G289600 chr7A 648679820 648680515 695 True 950.000000 950 91.231000 1 705 1 chr7A.!!$R1 704
8 TraesCS3B01G289600 chr5A 483539328 483540027 699 False 939.000000 939 90.832000 1 707 1 chr5A.!!$F1 706
9 TraesCS3B01G289600 chr4A 374638824 374639518 694 False 937.000000 937 90.935000 1 704 1 chr4A.!!$F2 703
10 TraesCS3B01G289600 chr4A 122967061 122967765 704 True 935.000000 935 90.516000 1 716 1 chr4A.!!$R1 715
11 TraesCS3B01G289600 chr4A 26679312 26680005 693 False 920.000000 920 90.537000 1 705 1 chr4A.!!$F1 704

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.740737 CCACGGGAAGGCAATGATTC 59.259 55.0 0.00 0.0 0.00 2.52 F
1050 1067 1.054406 CCTTCCGGCCCTTATCCTCA 61.054 60.0 0.00 0.0 0.00 3.86 F
2111 2129 0.037232 CCAGGGTTCTGTCGGAGTTC 60.037 60.0 0.00 0.0 39.31 3.01 F
2522 2608 0.320858 TGGTGGCGCAATTCTAACGA 60.321 50.0 10.83 0.0 0.00 3.85 F
2523 2609 0.373716 GGTGGCGCAATTCTAACGAG 59.626 55.0 10.83 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1153 1170 0.465460 TTGGCGTCCTCAAACTTGCT 60.465 50.0 0.00 0.0 0.00 3.91 R
3048 3515 0.038744 CAAGGCCTGGTCATCCAACT 59.961 55.0 5.69 0.0 43.81 3.16 R
3946 4413 0.107410 AGAAAGTCACACGGTTGCCA 60.107 50.0 0.00 0.0 0.00 4.92 R
4422 4893 0.183492 TTGCCTGCTTCACCTTCTGT 59.817 50.0 0.00 0.0 0.00 3.41 R
4691 5173 7.224522 ACCTACTCCGTATAAGCGAATAATT 57.775 36.0 0.00 0.0 0.00 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 0.740737 CCACGGGAAGGCAATGATTC 59.259 55.000 0.00 0.00 0.00 2.52
79 80 3.938963 CCTACTTAAAAGCGGAGATGCAA 59.061 43.478 0.00 0.00 37.31 4.08
328 331 7.996098 TTTCTTCCTCGGTTCTTGATTTTAT 57.004 32.000 0.00 0.00 0.00 1.40
332 335 8.705594 TCTTCCTCGGTTCTTGATTTTATCTAT 58.294 33.333 0.00 0.00 0.00 1.98
564 572 5.357878 AGAATTTGTCACAGTTGAGCAGAAA 59.642 36.000 0.00 0.00 30.10 2.52
567 575 5.581126 TTGTCACAGTTGAGCAGAAAAAT 57.419 34.783 0.00 0.00 30.10 1.82
569 577 4.639755 TGTCACAGTTGAGCAGAAAAATGA 59.360 37.500 0.00 0.00 30.10 2.57
627 635 3.896888 TGGAGCAAGTTGGTGAAATGAAT 59.103 39.130 13.24 0.00 0.00 2.57
673 681 7.936496 AATTTGAATCCACACCAAAAGTTTT 57.064 28.000 0.00 0.00 34.08 2.43
726 734 9.503399 GCTAGTTATATATAAACCTGGTTGCTT 57.497 33.333 13.79 0.00 0.00 3.91
770 786 4.414852 CTGGTAAGGAAAAACATGCGATG 58.585 43.478 0.00 0.00 0.00 3.84
952 969 3.842923 CCTCATCTCACGGCGCCT 61.843 66.667 26.68 8.92 0.00 5.52
1050 1067 1.054406 CCTTCCGGCCCTTATCCTCA 61.054 60.000 0.00 0.00 0.00 3.86
1153 1170 2.483876 CCTTCTTTGTCGACTTCAGCA 58.516 47.619 17.92 0.00 0.00 4.41
1244 1261 0.550393 GGGAGGGGAAAGAAGGACCT 60.550 60.000 0.00 0.00 0.00 3.85
1302 1319 1.227793 TGTCCGCATTGCACAGACA 60.228 52.632 17.40 17.40 0.00 3.41
1374 1391 2.348998 CAGGAGTTGGCTCGGCTT 59.651 61.111 0.00 0.00 42.53 4.35
1719 1736 1.135915 CAGACTCTGCCGCTAAGTGAT 59.864 52.381 3.36 0.00 0.00 3.06
1842 1859 1.122019 AAGAGGGTTCGTCCAGCACT 61.122 55.000 0.00 0.00 38.11 4.40
1891 1908 7.624344 GCAAGGTAGTTTAAAGCTGTGATAGTG 60.624 40.741 0.00 0.00 0.00 2.74
2058 2076 3.502191 TGAAACTTCACACACAAAGGC 57.498 42.857 0.00 0.00 31.01 4.35
2111 2129 0.037232 CCAGGGTTCTGTCGGAGTTC 60.037 60.000 0.00 0.00 39.31 3.01
2232 2250 8.927721 TCATGAAAGACGTTATTAATCGAAACA 58.072 29.630 0.00 0.00 0.00 2.83
2273 2308 9.284594 ACACAAAAATCACGCAATATATTGTAC 57.715 29.630 23.14 9.50 39.88 2.90
2303 2338 5.335127 CATTACCTTGCAGTACAATCTTGC 58.665 41.667 0.00 0.00 37.72 4.01
2361 2427 3.765511 ACAATCATTTGTACTGCCTGCAT 59.234 39.130 0.00 0.00 44.22 3.96
2392 2458 2.958355 AGTACAAATGGTGCACTGCTTT 59.042 40.909 17.98 10.89 32.21 3.51
2407 2473 5.401550 CACTGCTTTTGAGTTTTTGTCTGA 58.598 37.500 0.00 0.00 0.00 3.27
2469 2535 6.145371 GTGAAGCGAAGGCAATTCAAAAATAA 59.855 34.615 0.00 0.00 43.41 1.40
2495 2581 8.257602 TGTGGAATAATTACTCTGCCACTATA 57.742 34.615 13.59 0.00 43.45 1.31
2518 2604 0.679321 TGCATGGTGGCGCAATTCTA 60.679 50.000 10.83 0.00 34.59 2.10
2520 2606 1.798813 GCATGGTGGCGCAATTCTAAC 60.799 52.381 10.83 0.00 0.00 2.34
2521 2607 0.732571 ATGGTGGCGCAATTCTAACG 59.267 50.000 10.83 0.00 0.00 3.18
2522 2608 0.320858 TGGTGGCGCAATTCTAACGA 60.321 50.000 10.83 0.00 0.00 3.85
2523 2609 0.373716 GGTGGCGCAATTCTAACGAG 59.626 55.000 10.83 0.00 0.00 4.18
2524 2610 1.355971 GTGGCGCAATTCTAACGAGA 58.644 50.000 10.83 0.00 0.00 4.04
2525 2611 1.324736 GTGGCGCAATTCTAACGAGAG 59.675 52.381 10.83 0.00 31.77 3.20
2563 2650 2.285756 TGCGTTTCAGTTAGAACAACGG 59.714 45.455 14.47 0.00 36.75 4.44
2564 2651 2.899977 CGTTTCAGTTAGAACAACGGC 58.100 47.619 8.02 0.00 35.56 5.68
2566 2653 3.001939 CGTTTCAGTTAGAACAACGGCTT 59.998 43.478 8.02 0.00 35.56 4.35
2567 2654 4.524749 GTTTCAGTTAGAACAACGGCTTC 58.475 43.478 0.00 0.00 35.56 3.86
2576 2663 0.878961 ACAACGGCTTCGAGACCAAC 60.879 55.000 6.60 0.00 37.63 3.77
2614 2701 7.561237 TGCTTAAATCGACAGTAAATTTTGC 57.439 32.000 0.00 0.00 0.00 3.68
2625 2712 6.225318 ACAGTAAATTTTGCATTGCATGTCT 58.775 32.000 12.95 2.29 38.76 3.41
2626 2713 6.146510 ACAGTAAATTTTGCATTGCATGTCTG 59.853 34.615 12.95 14.74 38.76 3.51
2627 2714 6.146510 CAGTAAATTTTGCATTGCATGTCTGT 59.853 34.615 12.95 0.00 38.76 3.41
2628 2715 7.328982 CAGTAAATTTTGCATTGCATGTCTGTA 59.671 33.333 12.95 0.00 38.76 2.74
2629 2716 6.715344 AAATTTTGCATTGCATGTCTGTAG 57.285 33.333 12.95 0.00 38.76 2.74
2631 2718 5.450592 TTTTGCATTGCATGTCTGTAGAA 57.549 34.783 12.95 0.00 38.76 2.10
2632 2719 4.690184 TTGCATTGCATGTCTGTAGAAG 57.310 40.909 12.95 0.00 38.76 2.85
2633 2720 3.678289 TGCATTGCATGTCTGTAGAAGT 58.322 40.909 7.38 0.00 31.71 3.01
2634 2721 3.437741 TGCATTGCATGTCTGTAGAAGTG 59.562 43.478 7.38 0.00 31.71 3.16
2635 2722 3.438087 GCATTGCATGTCTGTAGAAGTGT 59.562 43.478 3.15 0.00 0.00 3.55
2637 2724 4.335400 TTGCATGTCTGTAGAAGTGTGA 57.665 40.909 0.00 0.00 0.00 3.58
2638 2725 4.541973 TGCATGTCTGTAGAAGTGTGAT 57.458 40.909 0.00 0.00 0.00 3.06
2646 2733 6.257849 TGTCTGTAGAAGTGTGATGAACAAAC 59.742 38.462 0.00 0.00 41.57 2.93
2659 2746 8.075574 TGTGATGAACAAACTATGAACATGTTC 58.924 33.333 28.10 28.10 46.20 3.18
2678 2765 9.445786 ACATGTTCACTTTATCGTTTAAAACAG 57.554 29.630 0.00 0.00 0.00 3.16
2719 2808 7.450124 AAAACCATGCATGCAATAAAAATGA 57.550 28.000 26.68 0.00 0.00 2.57
2721 2810 4.573201 ACCATGCATGCAATAAAAATGAGC 59.427 37.500 26.68 0.00 0.00 4.26
2732 2821 1.247567 AAAATGAGCGGACCACCAAG 58.752 50.000 0.00 0.00 35.59 3.61
2745 2834 4.925646 GGACCACCAAGTAGTTTTACTACG 59.074 45.833 10.40 1.51 44.26 3.51
2774 2863 6.071051 TGGCAACACTGAATACTACTACATGA 60.071 38.462 0.00 0.00 46.17 3.07
2880 3347 5.894298 ATAGCATCAAAGGGATACAGTCA 57.106 39.130 0.00 0.00 33.95 3.41
2910 3377 5.131142 AGCATACACCCAGCTTCTACTTAAT 59.869 40.000 0.00 0.00 34.37 1.40
2911 3378 5.823045 GCATACACCCAGCTTCTACTTAATT 59.177 40.000 0.00 0.00 0.00 1.40
2912 3379 6.990349 GCATACACCCAGCTTCTACTTAATTA 59.010 38.462 0.00 0.00 0.00 1.40
2913 3380 7.497909 GCATACACCCAGCTTCTACTTAATTAA 59.502 37.037 0.00 0.00 0.00 1.40
3020 3487 8.388853 GTCGAAATTTTCAGTCCTAATTCCTAC 58.611 37.037 9.66 0.00 0.00 3.18
3036 3503 2.038557 TCCTACTTGTTTCTGACCAGGC 59.961 50.000 0.00 0.00 0.00 4.85
3037 3504 2.427506 CTACTTGTTTCTGACCAGGCC 58.572 52.381 0.00 0.00 0.00 5.19
3038 3505 0.846693 ACTTGTTTCTGACCAGGCCT 59.153 50.000 0.00 0.00 0.00 5.19
3039 3506 1.215423 ACTTGTTTCTGACCAGGCCTT 59.785 47.619 0.00 0.00 0.00 4.35
3040 3507 1.610522 CTTGTTTCTGACCAGGCCTTG 59.389 52.381 0.00 0.68 0.00 3.61
3041 3508 0.550914 TGTTTCTGACCAGGCCTTGT 59.449 50.000 9.72 9.72 0.00 3.16
3042 3509 1.064017 TGTTTCTGACCAGGCCTTGTT 60.064 47.619 11.42 0.00 0.00 2.83
3043 3510 2.031870 GTTTCTGACCAGGCCTTGTTT 58.968 47.619 11.42 0.00 0.00 2.83
3044 3511 3.219281 GTTTCTGACCAGGCCTTGTTTA 58.781 45.455 11.42 2.99 0.00 2.01
3045 3512 3.806949 TTCTGACCAGGCCTTGTTTAT 57.193 42.857 11.42 0.00 0.00 1.40
3046 3513 3.806949 TCTGACCAGGCCTTGTTTATT 57.193 42.857 11.42 0.00 0.00 1.40
3047 3514 4.112634 TCTGACCAGGCCTTGTTTATTT 57.887 40.909 11.42 0.00 0.00 1.40
3048 3515 5.249780 TCTGACCAGGCCTTGTTTATTTA 57.750 39.130 11.42 0.00 0.00 1.40
3049 3516 5.253330 TCTGACCAGGCCTTGTTTATTTAG 58.747 41.667 11.42 3.97 0.00 1.85
3050 3517 4.993028 TGACCAGGCCTTGTTTATTTAGT 58.007 39.130 11.42 0.00 0.00 2.24
3051 3518 5.390387 TGACCAGGCCTTGTTTATTTAGTT 58.610 37.500 11.42 0.00 0.00 2.24
3052 3519 5.242838 TGACCAGGCCTTGTTTATTTAGTTG 59.757 40.000 11.42 0.00 0.00 3.16
3053 3520 4.526650 ACCAGGCCTTGTTTATTTAGTTGG 59.473 41.667 0.00 0.00 0.00 3.77
3054 3521 4.770010 CCAGGCCTTGTTTATTTAGTTGGA 59.230 41.667 0.00 0.00 0.00 3.53
3055 3522 5.422012 CCAGGCCTTGTTTATTTAGTTGGAT 59.578 40.000 0.00 0.00 0.00 3.41
3056 3523 6.332630 CAGGCCTTGTTTATTTAGTTGGATG 58.667 40.000 0.00 0.00 0.00 3.51
3057 3524 6.152661 CAGGCCTTGTTTATTTAGTTGGATGA 59.847 38.462 0.00 0.00 0.00 2.92
3058 3525 6.152831 AGGCCTTGTTTATTTAGTTGGATGAC 59.847 38.462 0.00 0.00 0.00 3.06
3105 3572 9.677567 TGTGCTTTTCTTGAAAACTTATATGAC 57.322 29.630 4.61 0.00 0.00 3.06
3323 3790 2.230266 GCTAACCAAAATTTCTCCGCCA 59.770 45.455 0.00 0.00 0.00 5.69
3324 3791 3.119137 GCTAACCAAAATTTCTCCGCCAT 60.119 43.478 0.00 0.00 0.00 4.40
3328 3795 5.009854 ACCAAAATTTCTCCGCCATATTG 57.990 39.130 0.00 0.00 0.00 1.90
3395 3862 9.310716 ACTTTAATAAGAGAACCGTGCTAATAC 57.689 33.333 0.00 0.00 35.30 1.89
3403 3870 6.771749 AGAGAACCGTGCTAATACTGTACTAT 59.228 38.462 0.00 0.00 0.00 2.12
3409 3876 6.372185 CGTGCTAATACTGTACTATCTCCAC 58.628 44.000 0.00 0.00 0.00 4.02
3411 3878 5.472478 TGCTAATACTGTACTATCTCCACCG 59.528 44.000 0.00 0.00 0.00 4.94
3419 3886 5.399991 TGTACTATCTCCACCGGGATTTAT 58.600 41.667 6.32 0.00 43.91 1.40
3420 3887 6.554784 TGTACTATCTCCACCGGGATTTATA 58.445 40.000 6.32 0.00 43.91 0.98
3421 3888 5.997384 ACTATCTCCACCGGGATTTATAC 57.003 43.478 6.32 0.00 43.91 1.47
3422 3889 5.399991 ACTATCTCCACCGGGATTTATACA 58.600 41.667 6.32 0.00 43.91 2.29
3425 3892 4.489737 TCTCCACCGGGATTTATACATCT 58.510 43.478 6.32 0.00 43.91 2.90
3431 3898 4.459685 ACCGGGATTTATACATCTCTCTCG 59.540 45.833 6.32 0.00 0.00 4.04
3445 3912 2.695666 CTCTCTCGGATTTGGAGCCTAA 59.304 50.000 0.00 0.00 0.00 2.69
3500 3967 1.550327 TGTGCCACAACAAGTTTCCA 58.450 45.000 0.00 0.00 0.00 3.53
3501 3968 1.476085 TGTGCCACAACAAGTTTCCAG 59.524 47.619 0.00 0.00 0.00 3.86
3502 3969 1.476488 GTGCCACAACAAGTTTCCAGT 59.524 47.619 0.00 0.00 0.00 4.00
3503 3970 1.476085 TGCCACAACAAGTTTCCAGTG 59.524 47.619 0.00 0.00 0.00 3.66
3504 3971 1.748493 GCCACAACAAGTTTCCAGTGA 59.252 47.619 0.00 0.00 0.00 3.41
3505 3972 2.165437 GCCACAACAAGTTTCCAGTGAA 59.835 45.455 0.00 0.00 0.00 3.18
3506 3973 3.734902 GCCACAACAAGTTTCCAGTGAAG 60.735 47.826 0.00 0.00 0.00 3.02
3507 3974 3.443681 CCACAACAAGTTTCCAGTGAAGT 59.556 43.478 0.00 0.00 0.00 3.01
3508 3975 4.414852 CACAACAAGTTTCCAGTGAAGTG 58.585 43.478 0.00 0.00 0.00 3.16
3509 3976 4.155826 CACAACAAGTTTCCAGTGAAGTGA 59.844 41.667 0.00 0.00 0.00 3.41
3510 3977 4.949856 ACAACAAGTTTCCAGTGAAGTGAT 59.050 37.500 0.00 0.00 0.00 3.06
3511 3978 5.163622 ACAACAAGTTTCCAGTGAAGTGATG 60.164 40.000 0.00 0.00 0.00 3.07
3512 3979 4.526970 ACAAGTTTCCAGTGAAGTGATGT 58.473 39.130 0.00 0.00 0.00 3.06
3513 3980 5.680619 ACAAGTTTCCAGTGAAGTGATGTA 58.319 37.500 0.00 0.00 0.00 2.29
3514 3981 6.299141 ACAAGTTTCCAGTGAAGTGATGTAT 58.701 36.000 0.00 0.00 0.00 2.29
3515 3982 6.205464 ACAAGTTTCCAGTGAAGTGATGTATG 59.795 38.462 0.00 0.00 0.00 2.39
3516 3983 5.869579 AGTTTCCAGTGAAGTGATGTATGT 58.130 37.500 0.00 0.00 0.00 2.29
3517 3984 6.299141 AGTTTCCAGTGAAGTGATGTATGTT 58.701 36.000 0.00 0.00 0.00 2.71
3518 3985 6.428159 AGTTTCCAGTGAAGTGATGTATGTTC 59.572 38.462 0.00 0.00 0.00 3.18
3519 3986 5.745312 TCCAGTGAAGTGATGTATGTTCT 57.255 39.130 0.00 0.00 0.00 3.01
3520 3987 5.482006 TCCAGTGAAGTGATGTATGTTCTG 58.518 41.667 0.00 0.00 0.00 3.02
3521 3988 5.245977 TCCAGTGAAGTGATGTATGTTCTGA 59.754 40.000 0.00 0.00 0.00 3.27
3522 3989 5.579904 CCAGTGAAGTGATGTATGTTCTGAG 59.420 44.000 0.00 0.00 0.00 3.35
3523 3990 6.162079 CAGTGAAGTGATGTATGTTCTGAGT 58.838 40.000 0.00 0.00 0.00 3.41
3524 3991 6.309980 CAGTGAAGTGATGTATGTTCTGAGTC 59.690 42.308 0.00 0.00 0.00 3.36
3525 3992 6.015095 AGTGAAGTGATGTATGTTCTGAGTCA 60.015 38.462 0.00 0.00 0.00 3.41
3526 3993 6.815641 GTGAAGTGATGTATGTTCTGAGTCAT 59.184 38.462 0.00 3.68 0.00 3.06
3527 3994 7.976175 GTGAAGTGATGTATGTTCTGAGTCATA 59.024 37.037 0.00 0.00 0.00 2.15
3528 3995 8.699130 TGAAGTGATGTATGTTCTGAGTCATAT 58.301 33.333 0.00 0.00 0.00 1.78
3531 3998 9.973450 AGTGATGTATGTTCTGAGTCATATAAC 57.027 33.333 0.00 0.00 0.00 1.89
3532 3999 9.973450 GTGATGTATGTTCTGAGTCATATAACT 57.027 33.333 11.96 0.00 0.00 2.24
3940 4407 5.363562 TCATTAGCCATGATCTTCAGTGT 57.636 39.130 0.00 0.00 36.94 3.55
3941 4408 5.748402 TCATTAGCCATGATCTTCAGTGTT 58.252 37.500 0.00 0.00 36.94 3.32
3942 4409 5.819379 TCATTAGCCATGATCTTCAGTGTTC 59.181 40.000 0.00 0.00 36.94 3.18
3943 4410 3.708403 AGCCATGATCTTCAGTGTTCA 57.292 42.857 0.00 0.00 0.00 3.18
3944 4411 4.232188 AGCCATGATCTTCAGTGTTCAT 57.768 40.909 0.00 0.00 0.00 2.57
3945 4412 4.597004 AGCCATGATCTTCAGTGTTCATT 58.403 39.130 0.00 0.00 0.00 2.57
3946 4413 5.014858 AGCCATGATCTTCAGTGTTCATTT 58.985 37.500 0.00 0.00 0.00 2.32
3947 4414 5.100259 GCCATGATCTTCAGTGTTCATTTG 58.900 41.667 0.00 0.00 0.00 2.32
3948 4415 5.647589 CCATGATCTTCAGTGTTCATTTGG 58.352 41.667 0.00 0.00 0.00 3.28
3949 4416 4.771590 TGATCTTCAGTGTTCATTTGGC 57.228 40.909 0.00 0.00 0.00 4.52
3950 4417 4.143543 TGATCTTCAGTGTTCATTTGGCA 58.856 39.130 0.00 0.00 0.00 4.92
3951 4418 4.583907 TGATCTTCAGTGTTCATTTGGCAA 59.416 37.500 0.00 0.00 0.00 4.52
3952 4419 4.305989 TCTTCAGTGTTCATTTGGCAAC 57.694 40.909 0.00 0.00 0.00 4.17
3953 4420 3.068024 TCTTCAGTGTTCATTTGGCAACC 59.932 43.478 0.00 0.00 0.00 3.77
3954 4421 1.336440 TCAGTGTTCATTTGGCAACCG 59.664 47.619 0.00 0.00 0.00 4.44
3955 4422 1.066908 CAGTGTTCATTTGGCAACCGT 59.933 47.619 0.00 0.00 0.00 4.83
3989 4456 6.710692 AAACGCATGGAATTCAATTCTTTC 57.289 33.333 10.01 0.00 39.24 2.62
3991 4458 5.404946 ACGCATGGAATTCAATTCTTTCTG 58.595 37.500 10.01 4.31 39.24 3.02
4155 4626 1.535462 CCCACCAGTAAGCTCAAAACG 59.465 52.381 0.00 0.00 0.00 3.60
4160 4631 2.095718 CCAGTAAGCTCAAAACGGAAGC 60.096 50.000 0.00 0.00 0.00 3.86
4691 5173 4.594854 TGGGCCCGCTTTGCAGAA 62.595 61.111 19.37 0.00 0.00 3.02
4729 5213 5.046520 ACGGAGTAGGTTTGAAATTAGAGCT 60.047 40.000 0.00 0.00 41.94 4.09
4788 5272 3.293311 CTGATTCAGCACCAAACCTTG 57.707 47.619 0.00 0.00 0.00 3.61
4791 5275 1.110442 TTCAGCACCAAACCTTGTGG 58.890 50.000 0.00 0.00 42.28 4.17
4847 5546 5.240891 TCTCAATAAAGCTTCACTCCACTG 58.759 41.667 0.00 0.00 0.00 3.66
4852 5551 6.715347 ATAAAGCTTCACTCCACTGTTTTT 57.285 33.333 0.00 0.00 0.00 1.94
4923 5652 5.701290 AGAGTGAGAAAAGGGTTTATCGTTG 59.299 40.000 0.00 0.00 37.71 4.10
4927 5656 4.332828 AGAAAAGGGTTTATCGTTGGGAG 58.667 43.478 0.00 0.00 0.00 4.30
4936 5665 1.852157 ATCGTTGGGAGTGGCCACAT 61.852 55.000 36.39 21.77 38.95 3.21
4945 5674 2.440409 GAGTGGCCACATGACAAGATT 58.560 47.619 36.39 12.82 0.00 2.40
4946 5675 2.421424 GAGTGGCCACATGACAAGATTC 59.579 50.000 36.39 17.65 0.00 2.52
4948 5677 2.163010 GTGGCCACATGACAAGATTCAG 59.837 50.000 31.23 0.00 0.00 3.02
4949 5678 1.747355 GGCCACATGACAAGATTCAGG 59.253 52.381 0.00 0.00 33.44 3.86
4950 5679 1.747355 GCCACATGACAAGATTCAGGG 59.253 52.381 0.00 0.00 31.42 4.45
4951 5680 2.618816 GCCACATGACAAGATTCAGGGA 60.619 50.000 0.00 0.00 31.42 4.20
4952 5681 3.689347 CCACATGACAAGATTCAGGGAA 58.311 45.455 0.00 0.00 31.42 3.97
4953 5682 3.693085 CCACATGACAAGATTCAGGGAAG 59.307 47.826 0.00 0.00 31.42 3.46
4954 5683 4.566278 CCACATGACAAGATTCAGGGAAGA 60.566 45.833 0.00 0.00 31.42 2.87
4955 5684 4.394300 CACATGACAAGATTCAGGGAAGAC 59.606 45.833 0.00 0.00 31.42 3.01
4956 5685 4.288105 ACATGACAAGATTCAGGGAAGACT 59.712 41.667 0.00 0.00 31.42 3.24
4957 5686 5.485353 ACATGACAAGATTCAGGGAAGACTA 59.515 40.000 0.00 0.00 31.42 2.59
4958 5687 5.667539 TGACAAGATTCAGGGAAGACTAG 57.332 43.478 0.00 0.00 0.00 2.57
4959 5688 4.081420 TGACAAGATTCAGGGAAGACTAGC 60.081 45.833 0.00 0.00 0.00 3.42
4960 5689 3.840666 ACAAGATTCAGGGAAGACTAGCA 59.159 43.478 0.00 0.00 0.00 3.49
4961 5690 4.287067 ACAAGATTCAGGGAAGACTAGCAA 59.713 41.667 0.00 0.00 0.00 3.91
4962 5691 4.751767 AGATTCAGGGAAGACTAGCAAG 57.248 45.455 0.00 0.00 0.00 4.01
4963 5692 4.357325 AGATTCAGGGAAGACTAGCAAGA 58.643 43.478 0.00 0.00 0.00 3.02
4964 5693 4.968080 AGATTCAGGGAAGACTAGCAAGAT 59.032 41.667 0.00 0.00 0.00 2.40
4965 5694 4.478206 TTCAGGGAAGACTAGCAAGATG 57.522 45.455 0.00 0.00 0.00 2.90
4966 5695 2.169352 TCAGGGAAGACTAGCAAGATGC 59.831 50.000 0.00 0.00 45.46 3.91
4976 5705 2.939782 GCAAGATGCTCATGCGTTG 58.060 52.632 0.00 0.00 40.96 4.10
4977 5706 1.138047 GCAAGATGCTCATGCGTTGC 61.138 55.000 0.00 0.00 41.91 4.17
4978 5707 0.169451 CAAGATGCTCATGCGTTGCA 59.831 50.000 5.91 5.91 44.86 4.08
4979 5708 0.169672 AAGATGCTCATGCGTTGCAC 59.830 50.000 5.61 1.79 43.04 4.57
4980 5709 1.581912 GATGCTCATGCGTTGCACG 60.582 57.895 5.61 4.61 43.04 5.34
4981 5710 2.908088 GATGCTCATGCGTTGCACGG 62.908 60.000 5.61 0.00 43.04 4.94
4983 5712 2.965147 GCTCATGCGTTGCACGGAA 61.965 57.895 6.93 0.00 46.78 4.30
4984 5713 1.154413 CTCATGCGTTGCACGGAAC 60.154 57.895 6.93 0.00 46.78 3.62
4985 5714 1.840630 CTCATGCGTTGCACGGAACA 61.841 55.000 6.93 0.00 46.78 3.18
4986 5715 1.209898 CATGCGTTGCACGGAACAT 59.790 52.632 6.93 2.04 46.78 2.71
4987 5716 0.794229 CATGCGTTGCACGGAACATC 60.794 55.000 6.93 0.00 46.78 3.06
4988 5717 1.233950 ATGCGTTGCACGGAACATCA 61.234 50.000 6.93 0.00 46.78 3.07
4989 5718 1.281353 GCGTTGCACGGAACATCAA 59.719 52.632 10.02 0.00 42.82 2.57
4990 5719 0.317436 GCGTTGCACGGAACATCAAA 60.317 50.000 10.02 0.00 42.82 2.69
4991 5720 1.665735 GCGTTGCACGGAACATCAAAT 60.666 47.619 10.02 0.00 42.82 2.32
4992 5721 1.978097 CGTTGCACGGAACATCAAATG 59.022 47.619 2.31 0.00 38.08 2.32
4993 5722 2.604373 CGTTGCACGGAACATCAAATGT 60.604 45.455 2.31 0.00 40.96 2.71
4994 5723 2.702898 TGCACGGAACATCAAATGTG 57.297 45.000 0.00 0.00 44.07 3.21
4995 5724 1.269174 TGCACGGAACATCAAATGTGG 59.731 47.619 0.00 0.00 44.07 4.17
4996 5725 1.402720 GCACGGAACATCAAATGTGGG 60.403 52.381 0.00 0.00 44.07 4.61
4997 5726 2.158559 CACGGAACATCAAATGTGGGA 58.841 47.619 0.00 0.00 44.07 4.37
4998 5727 2.162208 CACGGAACATCAAATGTGGGAG 59.838 50.000 0.00 0.00 44.07 4.30
4999 5728 2.039746 ACGGAACATCAAATGTGGGAGA 59.960 45.455 0.00 0.00 44.07 3.71
5000 5729 3.081061 CGGAACATCAAATGTGGGAGAA 58.919 45.455 0.00 0.00 44.07 2.87
5001 5730 3.505680 CGGAACATCAAATGTGGGAGAAA 59.494 43.478 0.00 0.00 44.07 2.52
5002 5731 4.022416 CGGAACATCAAATGTGGGAGAAAA 60.022 41.667 0.00 0.00 44.07 2.29
5003 5732 5.473039 GGAACATCAAATGTGGGAGAAAAG 58.527 41.667 0.00 0.00 44.07 2.27
5004 5733 5.473039 GAACATCAAATGTGGGAGAAAAGG 58.527 41.667 0.00 0.00 44.07 3.11
5005 5734 4.739793 ACATCAAATGTGGGAGAAAAGGA 58.260 39.130 0.00 0.00 43.01 3.36
5006 5735 5.336102 ACATCAAATGTGGGAGAAAAGGAT 58.664 37.500 0.00 0.00 43.01 3.24
5007 5736 5.186409 ACATCAAATGTGGGAGAAAAGGATG 59.814 40.000 0.00 0.00 43.01 3.51
5008 5737 4.996793 TCAAATGTGGGAGAAAAGGATGA 58.003 39.130 0.00 0.00 0.00 2.92
5009 5738 5.392995 TCAAATGTGGGAGAAAAGGATGAA 58.607 37.500 0.00 0.00 0.00 2.57
5010 5739 5.243730 TCAAATGTGGGAGAAAAGGATGAAC 59.756 40.000 0.00 0.00 0.00 3.18
5011 5740 2.778299 TGTGGGAGAAAAGGATGAACG 58.222 47.619 0.00 0.00 0.00 3.95
5012 5741 2.370519 TGTGGGAGAAAAGGATGAACGA 59.629 45.455 0.00 0.00 0.00 3.85
5013 5742 3.003480 GTGGGAGAAAAGGATGAACGAG 58.997 50.000 0.00 0.00 0.00 4.18
5014 5743 2.027192 TGGGAGAAAAGGATGAACGAGG 60.027 50.000 0.00 0.00 0.00 4.63
5015 5744 2.633488 GGAGAAAAGGATGAACGAGGG 58.367 52.381 0.00 0.00 0.00 4.30
5016 5745 2.236395 GGAGAAAAGGATGAACGAGGGA 59.764 50.000 0.00 0.00 0.00 4.20
5017 5746 3.307480 GGAGAAAAGGATGAACGAGGGAA 60.307 47.826 0.00 0.00 0.00 3.97
5018 5747 3.935828 GAGAAAAGGATGAACGAGGGAAG 59.064 47.826 0.00 0.00 0.00 3.46
5019 5748 2.789409 AAAGGATGAACGAGGGAAGG 57.211 50.000 0.00 0.00 0.00 3.46
5020 5749 0.253327 AAGGATGAACGAGGGAAGGC 59.747 55.000 0.00 0.00 0.00 4.35
5021 5750 1.153147 GGATGAACGAGGGAAGGCC 60.153 63.158 0.00 0.00 0.00 5.19
5022 5751 1.627297 GGATGAACGAGGGAAGGCCT 61.627 60.000 0.00 0.00 0.00 5.19
5023 5752 0.253327 GATGAACGAGGGAAGGCCTT 59.747 55.000 20.65 20.65 0.00 4.35
5024 5753 1.485066 GATGAACGAGGGAAGGCCTTA 59.515 52.381 20.54 0.00 0.00 2.69
5025 5754 1.580059 TGAACGAGGGAAGGCCTTAT 58.420 50.000 20.54 7.60 0.00 1.73
5026 5755 2.754465 TGAACGAGGGAAGGCCTTATA 58.246 47.619 20.54 0.00 0.00 0.98
5027 5756 3.314693 TGAACGAGGGAAGGCCTTATAT 58.685 45.455 20.54 6.76 0.00 0.86
5028 5757 4.485875 TGAACGAGGGAAGGCCTTATATA 58.514 43.478 20.54 0.00 0.00 0.86
5029 5758 4.282703 TGAACGAGGGAAGGCCTTATATAC 59.717 45.833 20.54 5.12 0.00 1.47
5030 5759 3.853207 ACGAGGGAAGGCCTTATATACA 58.147 45.455 20.54 0.00 0.00 2.29
5031 5760 4.228824 ACGAGGGAAGGCCTTATATACAA 58.771 43.478 20.54 0.00 0.00 2.41
5032 5761 4.657039 ACGAGGGAAGGCCTTATATACAAA 59.343 41.667 20.54 0.00 0.00 2.83
5033 5762 5.309806 ACGAGGGAAGGCCTTATATACAAAT 59.690 40.000 20.54 0.00 0.00 2.32
5034 5763 5.875359 CGAGGGAAGGCCTTATATACAAATC 59.125 44.000 20.54 0.88 0.00 2.17
5035 5764 6.295916 CGAGGGAAGGCCTTATATACAAATCT 60.296 42.308 20.54 3.84 0.00 2.40
5036 5765 6.784031 AGGGAAGGCCTTATATACAAATCTG 58.216 40.000 20.54 0.00 0.00 2.90
5037 5766 6.562608 AGGGAAGGCCTTATATACAAATCTGA 59.437 38.462 20.54 0.00 0.00 3.27
5038 5767 7.073725 AGGGAAGGCCTTATATACAAATCTGAA 59.926 37.037 20.54 0.00 0.00 3.02
5039 5768 7.391833 GGGAAGGCCTTATATACAAATCTGAAG 59.608 40.741 20.54 0.00 0.00 3.02
5040 5769 8.157476 GGAAGGCCTTATATACAAATCTGAAGA 58.843 37.037 20.54 0.00 0.00 2.87
5041 5770 9.213799 GAAGGCCTTATATACAAATCTGAAGAG 57.786 37.037 20.54 0.00 0.00 2.85
5042 5771 7.684529 AGGCCTTATATACAAATCTGAAGAGG 58.315 38.462 0.00 0.00 0.00 3.69
5043 5772 6.881602 GGCCTTATATACAAATCTGAAGAGGG 59.118 42.308 0.00 0.00 0.00 4.30
5044 5773 6.881602 GCCTTATATACAAATCTGAAGAGGGG 59.118 42.308 0.00 0.00 0.00 4.79
5045 5774 7.474936 GCCTTATATACAAATCTGAAGAGGGGT 60.475 40.741 0.00 0.00 0.00 4.95
5046 5775 7.880195 CCTTATATACAAATCTGAAGAGGGGTG 59.120 40.741 0.00 0.00 0.00 4.61
5047 5776 6.831664 ATATACAAATCTGAAGAGGGGTGT 57.168 37.500 0.00 0.00 0.00 4.16
5048 5777 3.146104 ACAAATCTGAAGAGGGGTGTG 57.854 47.619 0.00 0.00 0.00 3.82
5049 5778 2.224867 ACAAATCTGAAGAGGGGTGTGG 60.225 50.000 0.00 0.00 0.00 4.17
5050 5779 0.995024 AATCTGAAGAGGGGTGTGGG 59.005 55.000 0.00 0.00 0.00 4.61
5051 5780 0.178861 ATCTGAAGAGGGGTGTGGGT 60.179 55.000 0.00 0.00 0.00 4.51
5052 5781 0.490017 TCTGAAGAGGGGTGTGGGTA 59.510 55.000 0.00 0.00 0.00 3.69
5053 5782 1.080498 TCTGAAGAGGGGTGTGGGTAT 59.920 52.381 0.00 0.00 0.00 2.73
5054 5783 1.486726 CTGAAGAGGGGTGTGGGTATC 59.513 57.143 0.00 0.00 0.00 2.24
5055 5784 1.080498 TGAAGAGGGGTGTGGGTATCT 59.920 52.381 0.00 0.00 0.00 1.98
5056 5785 2.197465 GAAGAGGGGTGTGGGTATCTT 58.803 52.381 0.00 0.00 0.00 2.40
5057 5786 2.361085 AGAGGGGTGTGGGTATCTTT 57.639 50.000 0.00 0.00 0.00 2.52
5058 5787 2.644151 AGAGGGGTGTGGGTATCTTTT 58.356 47.619 0.00 0.00 0.00 2.27
5059 5788 2.993863 AGAGGGGTGTGGGTATCTTTTT 59.006 45.455 0.00 0.00 0.00 1.94
5060 5789 3.089284 GAGGGGTGTGGGTATCTTTTTG 58.911 50.000 0.00 0.00 0.00 2.44
5061 5790 1.548719 GGGGTGTGGGTATCTTTTTGC 59.451 52.381 0.00 0.00 0.00 3.68
5062 5791 2.243810 GGGTGTGGGTATCTTTTTGCA 58.756 47.619 0.00 0.00 0.00 4.08
5063 5792 2.630580 GGGTGTGGGTATCTTTTTGCAA 59.369 45.455 0.00 0.00 0.00 4.08
5064 5793 3.070302 GGGTGTGGGTATCTTTTTGCAAA 59.930 43.478 8.05 8.05 0.00 3.68
5065 5794 4.443598 GGGTGTGGGTATCTTTTTGCAAAA 60.444 41.667 20.46 20.46 0.00 2.44
5066 5795 5.304778 GGTGTGGGTATCTTTTTGCAAAAT 58.695 37.500 24.39 12.94 0.00 1.82
5067 5796 5.762711 GGTGTGGGTATCTTTTTGCAAAATT 59.237 36.000 24.39 14.72 0.00 1.82
5068 5797 6.293353 GGTGTGGGTATCTTTTTGCAAAATTG 60.293 38.462 24.39 19.07 0.00 2.32
5069 5798 6.481644 GTGTGGGTATCTTTTTGCAAAATTGA 59.518 34.615 24.39 22.94 0.00 2.57
5070 5799 6.481644 TGTGGGTATCTTTTTGCAAAATTGAC 59.518 34.615 24.39 18.12 0.00 3.18
5071 5800 6.481644 GTGGGTATCTTTTTGCAAAATTGACA 59.518 34.615 24.39 12.74 0.00 3.58
5072 5801 7.173047 GTGGGTATCTTTTTGCAAAATTGACAT 59.827 33.333 24.39 13.84 0.00 3.06
5073 5802 7.718753 TGGGTATCTTTTTGCAAAATTGACATT 59.281 29.630 24.39 13.09 0.00 2.71
5074 5803 8.016801 GGGTATCTTTTTGCAAAATTGACATTG 58.983 33.333 24.39 8.36 0.00 2.82
5075 5804 8.558700 GGTATCTTTTTGCAAAATTGACATTGT 58.441 29.630 24.39 12.50 0.00 2.71
5076 5805 9.934190 GTATCTTTTTGCAAAATTGACATTGTT 57.066 25.926 24.39 11.93 0.00 2.83
5078 5807 8.892887 TCTTTTTGCAAAATTGACATTGTTTC 57.107 26.923 24.39 0.00 0.00 2.78
5079 5808 7.967303 TCTTTTTGCAAAATTGACATTGTTTCC 59.033 29.630 24.39 0.00 0.00 3.13
5080 5809 6.998968 TTTGCAAAATTGACATTGTTTCCT 57.001 29.167 10.02 0.00 0.00 3.36
5081 5810 6.998968 TTGCAAAATTGACATTGTTTCCTT 57.001 29.167 0.00 0.00 0.00 3.36
5082 5811 6.601741 TGCAAAATTGACATTGTTTCCTTC 57.398 33.333 0.00 0.00 0.00 3.46
5083 5812 5.526846 TGCAAAATTGACATTGTTTCCTTCC 59.473 36.000 0.00 0.00 0.00 3.46
5084 5813 5.759763 GCAAAATTGACATTGTTTCCTTCCT 59.240 36.000 0.00 0.00 0.00 3.36
5085 5814 6.928492 GCAAAATTGACATTGTTTCCTTCCTA 59.072 34.615 0.00 0.00 0.00 2.94
5086 5815 7.603784 GCAAAATTGACATTGTTTCCTTCCTAT 59.396 33.333 0.00 0.00 0.00 2.57
5087 5816 9.143631 CAAAATTGACATTGTTTCCTTCCTATC 57.856 33.333 0.00 0.00 0.00 2.08
5088 5817 7.410120 AATTGACATTGTTTCCTTCCTATCC 57.590 36.000 0.00 0.00 0.00 2.59
5089 5818 4.513442 TGACATTGTTTCCTTCCTATCCG 58.487 43.478 0.00 0.00 0.00 4.18
5090 5819 4.019681 TGACATTGTTTCCTTCCTATCCGT 60.020 41.667 0.00 0.00 0.00 4.69
5091 5820 4.514401 ACATTGTTTCCTTCCTATCCGTC 58.486 43.478 0.00 0.00 0.00 4.79
5092 5821 4.019681 ACATTGTTTCCTTCCTATCCGTCA 60.020 41.667 0.00 0.00 0.00 4.35
5093 5822 3.887621 TGTTTCCTTCCTATCCGTCAG 57.112 47.619 0.00 0.00 0.00 3.51
5094 5823 3.437213 TGTTTCCTTCCTATCCGTCAGA 58.563 45.455 0.00 0.00 0.00 3.27
5095 5824 4.030913 TGTTTCCTTCCTATCCGTCAGAT 58.969 43.478 0.00 0.00 39.15 2.90
5096 5825 5.205821 TGTTTCCTTCCTATCCGTCAGATA 58.794 41.667 0.00 0.00 36.33 1.98
5097 5826 5.839063 TGTTTCCTTCCTATCCGTCAGATAT 59.161 40.000 0.00 0.00 36.84 1.63
5098 5827 7.008332 TGTTTCCTTCCTATCCGTCAGATATA 58.992 38.462 0.00 0.00 36.84 0.86
5099 5828 7.507956 TGTTTCCTTCCTATCCGTCAGATATAA 59.492 37.037 0.00 0.00 36.84 0.98
5100 5829 8.365647 GTTTCCTTCCTATCCGTCAGATATAAA 58.634 37.037 0.00 0.00 36.84 1.40
5101 5830 8.666129 TTCCTTCCTATCCGTCAGATATAAAT 57.334 34.615 0.00 0.00 36.84 1.40
5102 5831 8.294954 TCCTTCCTATCCGTCAGATATAAATC 57.705 38.462 0.00 0.00 36.84 2.17
5103 5832 7.067129 TCCTTCCTATCCGTCAGATATAAATCG 59.933 40.741 0.00 0.00 36.84 3.34
5104 5833 6.694877 TCCTATCCGTCAGATATAAATCGG 57.305 41.667 0.00 0.00 36.84 4.18
5118 5847 9.601217 AGATATAAATCGGACAACCTATATTGC 57.399 33.333 0.00 0.00 37.19 3.56
5119 5848 9.378551 GATATAAATCGGACAACCTATATTGCA 57.621 33.333 0.00 0.00 32.47 4.08
5120 5849 7.672983 ATAAATCGGACAACCTATATTGCAG 57.327 36.000 0.00 0.00 32.47 4.41
5121 5850 3.469008 TCGGACAACCTATATTGCAGG 57.531 47.619 0.00 0.00 39.25 4.85
5122 5851 3.035363 TCGGACAACCTATATTGCAGGA 58.965 45.455 0.00 0.00 36.61 3.86
5123 5852 3.646162 TCGGACAACCTATATTGCAGGAT 59.354 43.478 0.00 0.00 36.61 3.24
5124 5853 3.748048 CGGACAACCTATATTGCAGGATG 59.252 47.826 0.00 0.00 40.72 3.51
5125 5854 4.074970 GGACAACCTATATTGCAGGATGG 58.925 47.826 5.54 0.00 39.58 3.51
5126 5855 3.490348 ACAACCTATATTGCAGGATGGC 58.510 45.455 5.54 0.00 39.58 4.40
5127 5856 3.117550 ACAACCTATATTGCAGGATGGCA 60.118 43.478 5.54 0.00 39.58 4.92
5128 5857 3.430042 ACCTATATTGCAGGATGGCAG 57.570 47.619 0.00 0.00 45.88 4.85
5129 5858 2.040813 ACCTATATTGCAGGATGGCAGG 59.959 50.000 0.00 0.00 45.88 4.85
5130 5859 2.089980 CTATATTGCAGGATGGCAGGC 58.910 52.381 0.00 0.00 45.88 4.85
5131 5860 0.186630 ATATTGCAGGATGGCAGGCA 59.813 50.000 0.00 0.00 45.88 4.75
5132 5861 0.752743 TATTGCAGGATGGCAGGCAC 60.753 55.000 0.00 0.00 45.88 5.01
5133 5862 2.791613 ATTGCAGGATGGCAGGCACA 62.792 55.000 0.00 0.00 45.88 4.57
5134 5863 3.446570 GCAGGATGGCAGGCACAC 61.447 66.667 0.00 0.00 35.86 3.82
5135 5864 2.753043 CAGGATGGCAGGCACACC 60.753 66.667 12.37 12.37 0.00 4.16
5136 5865 3.259314 AGGATGGCAGGCACACCA 61.259 61.111 19.51 0.00 41.01 4.17
5139 5868 2.765279 ATGGCAGGCACACCATCA 59.235 55.556 0.00 0.00 42.69 3.07
5140 5869 1.308666 ATGGCAGGCACACCATCAT 59.691 52.632 0.00 0.00 42.69 2.45
5141 5870 0.754217 ATGGCAGGCACACCATCATC 60.754 55.000 0.00 0.00 42.69 2.92
5142 5871 1.378911 GGCAGGCACACCATCATCA 60.379 57.895 0.00 0.00 39.06 3.07
5143 5872 1.660560 GGCAGGCACACCATCATCAC 61.661 60.000 0.00 0.00 39.06 3.06
5144 5873 1.660560 GCAGGCACACCATCATCACC 61.661 60.000 0.00 0.00 39.06 4.02
5145 5874 0.322726 CAGGCACACCATCATCACCA 60.323 55.000 0.00 0.00 39.06 4.17
5146 5875 0.405198 AGGCACACCATCATCACCAA 59.595 50.000 0.00 0.00 39.06 3.67
5147 5876 0.527565 GGCACACCATCATCACCAAC 59.472 55.000 0.00 0.00 35.26 3.77
5148 5877 1.538047 GCACACCATCATCACCAACT 58.462 50.000 0.00 0.00 0.00 3.16
5149 5878 1.470098 GCACACCATCATCACCAACTC 59.530 52.381 0.00 0.00 0.00 3.01
5150 5879 2.877300 GCACACCATCATCACCAACTCT 60.877 50.000 0.00 0.00 0.00 3.24
5151 5880 2.745821 CACACCATCATCACCAACTCTG 59.254 50.000 0.00 0.00 0.00 3.35
5152 5881 2.373169 ACACCATCATCACCAACTCTGT 59.627 45.455 0.00 0.00 0.00 3.41
5153 5882 3.181440 ACACCATCATCACCAACTCTGTT 60.181 43.478 0.00 0.00 0.00 3.16
5154 5883 3.822735 CACCATCATCACCAACTCTGTTT 59.177 43.478 0.00 0.00 0.00 2.83
5155 5884 4.279169 CACCATCATCACCAACTCTGTTTT 59.721 41.667 0.00 0.00 0.00 2.43
5156 5885 4.895297 ACCATCATCACCAACTCTGTTTTT 59.105 37.500 0.00 0.00 0.00 1.94
5190 5919 5.361285 AGAGATACATGGTTAGGAGACACAC 59.639 44.000 0.00 0.00 0.00 3.82
5192 5921 1.275291 ACATGGTTAGGAGACACACCG 59.725 52.381 0.00 0.00 37.47 4.94
5193 5922 0.249398 ATGGTTAGGAGACACACCGC 59.751 55.000 0.00 0.00 37.47 5.68
5202 5931 2.027625 GACACACCGCTAGCCACAC 61.028 63.158 9.66 0.00 0.00 3.82
5210 5939 1.202639 CCGCTAGCCACACAATATCCA 60.203 52.381 9.66 0.00 0.00 3.41
5213 5942 2.738846 GCTAGCCACACAATATCCATCG 59.261 50.000 2.29 0.00 0.00 3.84
5219 5948 4.554723 GCCACACAATATCCATCGCTTTAC 60.555 45.833 0.00 0.00 0.00 2.01
5282 6011 1.733912 GGGTCGGTTCCGTTAAACATC 59.266 52.381 11.04 0.00 0.00 3.06
5290 6019 1.066716 TCCGTTAAACATCCAGTCCCG 60.067 52.381 0.00 0.00 0.00 5.14
5292 6021 2.613474 CCGTTAAACATCCAGTCCCGAA 60.613 50.000 0.00 0.00 0.00 4.30
5319 6048 1.668826 AGTTGGGGACAGATGGCTAA 58.331 50.000 0.00 0.00 44.54 3.09
5329 6058 2.679837 ACAGATGGCTAAATCTTGTGCG 59.320 45.455 0.00 0.00 34.60 5.34
5333 6062 1.086696 GGCTAAATCTTGTGCGCAGA 58.913 50.000 12.22 6.80 0.00 4.26
5334 6063 1.672881 GGCTAAATCTTGTGCGCAGAT 59.327 47.619 12.22 7.73 0.00 2.90
5339 6068 3.416119 AATCTTGTGCGCAGATTGATG 57.584 42.857 19.12 4.61 31.85 3.07
5342 6071 1.063616 CTTGTGCGCAGATTGATGGAG 59.936 52.381 12.22 0.00 0.00 3.86
5349 6078 2.285220 CGCAGATTGATGGAGGTTAACG 59.715 50.000 0.00 0.00 0.00 3.18
5350 6079 3.270877 GCAGATTGATGGAGGTTAACGT 58.729 45.455 0.00 0.00 0.00 3.99
5353 6082 5.673818 GCAGATTGATGGAGGTTAACGTTTC 60.674 44.000 5.91 0.00 0.00 2.78
5367 6096 2.625737 ACGTTTCTGATGAGCCTGATG 58.374 47.619 0.00 0.00 0.00 3.07
5369 6098 2.362736 GTTTCTGATGAGCCTGATGCA 58.637 47.619 0.00 0.00 44.83 3.96
5378 6107 0.322277 AGCCTGATGCACTTCACTGG 60.322 55.000 0.00 0.00 44.83 4.00
5384 6113 3.554934 TGATGCACTTCACTGGAAACTT 58.445 40.909 0.00 0.00 31.35 2.66
5386 6115 3.781079 TGCACTTCACTGGAAACTTTG 57.219 42.857 0.00 0.00 31.35 2.77
5402 6132 3.963129 ACTTTGGTGTCTGGAGTTTTCA 58.037 40.909 0.00 0.00 0.00 2.69
5404 6134 3.358111 TTGGTGTCTGGAGTTTTCACA 57.642 42.857 0.00 0.00 0.00 3.58
5405 6135 3.358111 TGGTGTCTGGAGTTTTCACAA 57.642 42.857 0.00 0.00 0.00 3.33
5412 6142 5.296780 TGTCTGGAGTTTTCACAATGAAGTC 59.703 40.000 0.00 0.00 37.70 3.01
5448 6178 9.095700 AGATTTATTAGACTCTAGTCCAATCCC 57.904 37.037 7.00 0.00 45.85 3.85
5451 6181 3.383698 AGACTCTAGTCCAATCCCGAA 57.616 47.619 6.50 0.00 45.85 4.30
5455 6185 3.068307 ACTCTAGTCCAATCCCGAAATCG 59.932 47.826 0.00 0.00 39.44 3.34
5467 6197 3.563808 TCCCGAAATCGCTTCATATTTGG 59.436 43.478 0.00 0.00 38.18 3.28
5486 6216 7.806680 ATTTGGAAGATTAAAGGGCCTTTAA 57.193 32.000 39.35 39.35 45.77 1.52
5513 6244 9.943163 AAATAAAAATTTGTATGTGGTTTGTGC 57.057 25.926 1.50 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.106029 AGCAATCAAGCTGCACTAATTG 57.894 40.909 1.02 7.45 44.66 2.32
92 95 0.753867 TTATCCCCGCGTGCATCTTA 59.246 50.000 4.92 0.00 0.00 2.10
349 354 4.212214 GTGTCTGCCAGAGTTTCACTAAAG 59.788 45.833 0.00 0.00 0.00 1.85
564 572 3.715628 ACTTTGACAAAGCGCTCATTT 57.284 38.095 24.63 0.00 42.27 2.32
567 575 2.013400 TCAACTTTGACAAAGCGCTCA 58.987 42.857 24.63 0.32 42.27 4.26
739 747 9.855021 CATGTTTTTCCTTACCAGGTTTATAAG 57.145 33.333 0.00 0.00 41.69 1.73
770 786 3.047877 CTTGGACCCACGGCGAAC 61.048 66.667 16.62 0.00 0.00 3.95
823 839 0.101759 CGTTTATCTCCTTCGCGGGA 59.898 55.000 6.13 4.86 0.00 5.14
862 878 0.105039 GTGGACAAGGAGCCTATCGG 59.895 60.000 0.00 0.00 0.00 4.18
876 892 0.914417 TCTGGATTGGGGAGGTGGAC 60.914 60.000 0.00 0.00 0.00 4.02
917 934 0.613777 GGAAGAGGTGACGATGGGTT 59.386 55.000 0.00 0.00 0.00 4.11
926 943 2.095461 CGTGAGATGAGGAAGAGGTGA 58.905 52.381 0.00 0.00 0.00 4.02
952 969 1.195442 TCGAACAGGTGGTGGGCATA 61.195 55.000 0.00 0.00 0.00 3.14
1071 1088 3.991536 GACGCGGCAGAGGAAGGAC 62.992 68.421 7.34 0.00 0.00 3.85
1153 1170 0.465460 TTGGCGTCCTCAAACTTGCT 60.465 50.000 0.00 0.00 0.00 3.91
1374 1391 3.318539 GAGTCTGTACGCGACGGCA 62.319 63.158 15.93 4.74 39.92 5.69
1379 1396 1.878088 GGGATATGAGTCTGTACGCGA 59.122 52.381 15.93 0.00 0.00 5.87
1842 1859 1.884579 GTGTCAGTGGAGGAAGTCGTA 59.115 52.381 0.00 0.00 0.00 3.43
1891 1908 1.990563 GCTTCATGTGAACTGCATTGC 59.009 47.619 0.46 0.46 0.00 3.56
2085 2103 2.350522 CGACAGAACCCTGGATTGAAG 58.649 52.381 0.00 0.00 44.60 3.02
2111 2129 4.870636 AGGATAGATAGAGCTCCTCATGG 58.129 47.826 10.93 0.00 32.62 3.66
2226 2244 3.182173 GTGTGCACATTTTCCATGTTTCG 59.818 43.478 24.69 0.00 0.00 3.46
2303 2338 1.080569 GCAAAACTGGGATGCGGTG 60.081 57.895 0.00 0.00 0.00 4.94
2361 2427 3.823873 CACCATTTGTACTGCCCAAACTA 59.176 43.478 0.00 0.00 34.85 2.24
2375 2441 2.798283 CTCAAAAGCAGTGCACCATTTG 59.202 45.455 19.20 20.00 0.00 2.32
2392 2458 4.036734 GTGCCTCATCAGACAAAAACTCAA 59.963 41.667 0.00 0.00 0.00 3.02
2428 2494 3.181516 GCTTCACTATTTGTTCTGCCTCG 60.182 47.826 0.00 0.00 0.00 4.63
2469 2535 6.006275 AGTGGCAGAGTAATTATTCCACAT 57.994 37.500 15.37 3.48 43.48 3.21
2483 2549 4.020751 ACCATGCAGTATATAGTGGCAGAG 60.021 45.833 17.40 12.77 0.00 3.35
2495 2581 0.752743 ATTGCGCCACCATGCAGTAT 60.753 50.000 4.18 0.00 42.89 2.12
2538 2625 5.454232 CGTTGTTCTAACTGAAACGCAAAAT 59.546 36.000 4.65 0.00 33.86 1.82
2541 2628 3.242478 CCGTTGTTCTAACTGAAACGCAA 60.242 43.478 9.96 0.00 37.49 4.85
2564 2651 1.137513 GTGGTTCGTTGGTCTCGAAG 58.862 55.000 1.09 0.00 45.58 3.79
2566 2653 1.364901 GGTGGTTCGTTGGTCTCGA 59.635 57.895 0.00 0.00 35.50 4.04
2567 2654 1.666872 GGGTGGTTCGTTGGTCTCG 60.667 63.158 0.00 0.00 0.00 4.04
2576 2663 0.250989 TAAGCAAAGGGGGTGGTTCG 60.251 55.000 0.00 0.00 37.79 3.95
2625 2712 8.147704 TCATAGTTTGTTCATCACACTTCTACA 58.852 33.333 0.00 0.00 38.01 2.74
2626 2713 8.534333 TCATAGTTTGTTCATCACACTTCTAC 57.466 34.615 0.00 0.00 38.01 2.59
2627 2714 8.988934 GTTCATAGTTTGTTCATCACACTTCTA 58.011 33.333 0.00 0.00 38.01 2.10
2628 2715 7.498900 TGTTCATAGTTTGTTCATCACACTTCT 59.501 33.333 0.00 0.00 38.01 2.85
2629 2716 7.639039 TGTTCATAGTTTGTTCATCACACTTC 58.361 34.615 0.00 0.00 38.01 3.01
2631 2718 7.229306 ACATGTTCATAGTTTGTTCATCACACT 59.771 33.333 0.00 0.00 39.86 3.55
2632 2719 7.362662 ACATGTTCATAGTTTGTTCATCACAC 58.637 34.615 0.00 0.00 33.98 3.82
2633 2720 7.509141 ACATGTTCATAGTTTGTTCATCACA 57.491 32.000 0.00 0.00 0.00 3.58
2634 2721 8.075574 TGAACATGTTCATAGTTTGTTCATCAC 58.924 33.333 32.36 5.83 46.59 3.06
2635 2722 8.164058 TGAACATGTTCATAGTTTGTTCATCA 57.836 30.769 32.36 9.15 46.59 3.07
2687 2776 9.999660 TTATTGCATGCATGGTTTTATTATGAT 57.000 25.926 27.34 9.03 0.00 2.45
2710 2799 3.080300 TGGTGGTCCGCTCATTTTTAT 57.920 42.857 1.66 0.00 36.30 1.40
2719 2808 0.763035 AAACTACTTGGTGGTCCGCT 59.237 50.000 1.66 0.00 36.30 5.52
2721 2810 3.999046 AGTAAAACTACTTGGTGGTCCG 58.001 45.455 0.00 0.00 36.30 4.79
2732 2821 3.319755 TGCCACAGCGTAGTAAAACTAC 58.680 45.455 7.08 7.08 45.71 2.73
2745 2834 2.154462 AGTATTCAGTGTTGCCACAGC 58.846 47.619 0.00 0.00 44.39 4.40
2762 2851 6.539826 TCCGTTTCGAATCTCATGTAGTAGTA 59.460 38.462 0.00 0.00 0.00 1.82
2763 2852 5.356190 TCCGTTTCGAATCTCATGTAGTAGT 59.644 40.000 0.00 0.00 0.00 2.73
2764 2853 5.817988 TCCGTTTCGAATCTCATGTAGTAG 58.182 41.667 0.00 0.00 0.00 2.57
2774 2863 4.151867 GTGTAAAGCTTCCGTTTCGAATCT 59.848 41.667 0.00 0.00 0.00 2.40
2875 2965 5.180117 GCTGGGTGTATGCTTATTATGACTG 59.820 44.000 0.00 0.00 0.00 3.51
2880 3347 6.192970 AGAAGCTGGGTGTATGCTTATTAT 57.807 37.500 0.00 0.00 45.56 1.28
2910 3377 5.341872 AGCATGTGCATAGCCAAATTTAA 57.658 34.783 7.83 0.00 45.16 1.52
2911 3378 5.110598 CAAGCATGTGCATAGCCAAATTTA 58.889 37.500 7.83 0.00 45.16 1.40
2912 3379 3.899052 AGCATGTGCATAGCCAAATTT 57.101 38.095 7.83 0.00 45.16 1.82
2913 3380 3.055675 ACAAGCATGTGCATAGCCAAATT 60.056 39.130 7.83 0.00 45.16 1.82
2977 3444 4.696899 TCGACACGATGTCTTCACTATT 57.303 40.909 13.65 0.00 44.85 1.73
3020 3487 1.610522 CAAGGCCTGGTCAGAAACAAG 59.389 52.381 5.69 0.00 0.00 3.16
3036 3503 7.362920 CCTGGTCATCCAACTAAATAAACAAGG 60.363 40.741 0.00 0.00 43.81 3.61
3037 3504 7.538575 CCTGGTCATCCAACTAAATAAACAAG 58.461 38.462 0.00 0.00 43.81 3.16
3038 3505 6.071616 GCCTGGTCATCCAACTAAATAAACAA 60.072 38.462 0.00 0.00 43.81 2.83
3039 3506 5.417580 GCCTGGTCATCCAACTAAATAAACA 59.582 40.000 0.00 0.00 43.81 2.83
3040 3507 5.163550 GGCCTGGTCATCCAACTAAATAAAC 60.164 44.000 0.00 0.00 43.81 2.01
3041 3508 4.953579 GGCCTGGTCATCCAACTAAATAAA 59.046 41.667 0.00 0.00 43.81 1.40
3042 3509 4.229582 AGGCCTGGTCATCCAACTAAATAA 59.770 41.667 3.11 0.00 43.81 1.40
3043 3510 3.785887 AGGCCTGGTCATCCAACTAAATA 59.214 43.478 3.11 0.00 43.81 1.40
3044 3511 2.582636 AGGCCTGGTCATCCAACTAAAT 59.417 45.455 3.11 0.00 43.81 1.40
3045 3512 1.992557 AGGCCTGGTCATCCAACTAAA 59.007 47.619 3.11 0.00 43.81 1.85
3046 3513 1.668826 AGGCCTGGTCATCCAACTAA 58.331 50.000 3.11 0.00 43.81 2.24
3047 3514 1.281867 CAAGGCCTGGTCATCCAACTA 59.718 52.381 5.69 0.00 43.81 2.24
3048 3515 0.038744 CAAGGCCTGGTCATCCAACT 59.961 55.000 5.69 0.00 43.81 3.16
3049 3516 0.251341 ACAAGGCCTGGTCATCCAAC 60.251 55.000 7.09 0.00 43.81 3.77
3050 3517 0.482446 AACAAGGCCTGGTCATCCAA 59.518 50.000 14.90 0.00 43.81 3.53
3051 3518 0.251297 CAACAAGGCCTGGTCATCCA 60.251 55.000 14.90 0.00 42.05 3.41
3052 3519 0.967380 CCAACAAGGCCTGGTCATCC 60.967 60.000 14.90 0.00 0.00 3.51
3053 3520 0.251341 ACCAACAAGGCCTGGTCATC 60.251 55.000 14.90 0.00 42.44 2.92
3054 3521 0.188342 AACCAACAAGGCCTGGTCAT 59.812 50.000 14.90 0.00 45.39 3.06
3055 3522 0.754957 CAACCAACAAGGCCTGGTCA 60.755 55.000 14.90 0.00 45.39 4.02
3056 3523 2.041153 CAACCAACAAGGCCTGGTC 58.959 57.895 14.90 0.00 45.39 4.02
3058 3525 2.736531 GCAACCAACAAGGCCTGG 59.263 61.111 5.69 5.45 43.14 4.45
3103 3570 8.612619 CATCTAATGGTATACACAAACTTGGTC 58.387 37.037 5.01 0.00 0.00 4.02
3104 3571 7.067008 GCATCTAATGGTATACACAAACTTGGT 59.933 37.037 5.01 0.00 0.00 3.67
3105 3572 7.283127 AGCATCTAATGGTATACACAAACTTGG 59.717 37.037 5.01 0.00 39.58 3.61
3395 3862 2.359981 TCCCGGTGGAGATAGTACAG 57.640 55.000 0.00 0.00 35.03 2.74
3403 3870 4.489737 AGATGTATAAATCCCGGTGGAGA 58.510 43.478 0.00 0.00 46.08 3.71
3409 3876 4.142359 CCGAGAGAGATGTATAAATCCCGG 60.142 50.000 0.00 0.00 0.00 5.73
3411 3878 6.783708 ATCCGAGAGAGATGTATAAATCCC 57.216 41.667 0.00 0.00 0.00 3.85
3419 3886 3.319405 GCTCCAAATCCGAGAGAGATGTA 59.681 47.826 0.00 0.00 0.00 2.29
3420 3887 2.102252 GCTCCAAATCCGAGAGAGATGT 59.898 50.000 0.00 0.00 0.00 3.06
3421 3888 2.547642 GGCTCCAAATCCGAGAGAGATG 60.548 54.545 0.00 0.00 0.00 2.90
3422 3889 1.691434 GGCTCCAAATCCGAGAGAGAT 59.309 52.381 0.00 0.00 0.00 2.75
3425 3892 2.454336 TAGGCTCCAAATCCGAGAGA 57.546 50.000 0.00 0.00 0.00 3.10
3431 3898 4.466015 TGGTCAAATTTAGGCTCCAAATCC 59.534 41.667 0.00 0.00 0.00 3.01
3500 3967 6.015095 TGACTCAGAACATACATCACTTCACT 60.015 38.462 0.00 0.00 0.00 3.41
3501 3968 6.159293 TGACTCAGAACATACATCACTTCAC 58.841 40.000 0.00 0.00 0.00 3.18
3502 3969 6.345096 TGACTCAGAACATACATCACTTCA 57.655 37.500 0.00 0.00 0.00 3.02
3505 3972 9.973450 GTTATATGACTCAGAACATACATCACT 57.027 33.333 0.00 0.00 32.90 3.41
3506 3973 9.973450 AGTTATATGACTCAGAACATACATCAC 57.027 33.333 0.00 0.00 32.90 3.06
3919 4386 5.587443 TGAACACTGAAGATCATGGCTAATG 59.413 40.000 0.00 0.00 37.66 1.90
3920 4387 5.748402 TGAACACTGAAGATCATGGCTAAT 58.252 37.500 0.00 0.00 0.00 1.73
3921 4388 5.164620 TGAACACTGAAGATCATGGCTAA 57.835 39.130 0.00 0.00 0.00 3.09
3922 4389 4.824479 TGAACACTGAAGATCATGGCTA 57.176 40.909 0.00 0.00 0.00 3.93
3923 4390 3.708403 TGAACACTGAAGATCATGGCT 57.292 42.857 0.00 0.00 0.00 4.75
3924 4391 4.978083 AATGAACACTGAAGATCATGGC 57.022 40.909 0.00 0.00 33.06 4.40
3925 4392 5.647589 CCAAATGAACACTGAAGATCATGG 58.352 41.667 0.00 0.00 33.06 3.66
3926 4393 5.100259 GCCAAATGAACACTGAAGATCATG 58.900 41.667 0.00 0.00 33.06 3.07
3927 4394 4.768448 TGCCAAATGAACACTGAAGATCAT 59.232 37.500 0.00 0.00 34.11 2.45
3928 4395 4.143543 TGCCAAATGAACACTGAAGATCA 58.856 39.130 0.00 0.00 0.00 2.92
3929 4396 4.771590 TGCCAAATGAACACTGAAGATC 57.228 40.909 0.00 0.00 0.00 2.75
3930 4397 4.262164 GGTTGCCAAATGAACACTGAAGAT 60.262 41.667 0.00 0.00 0.00 2.40
3931 4398 3.068024 GGTTGCCAAATGAACACTGAAGA 59.932 43.478 0.00 0.00 0.00 2.87
3932 4399 3.383761 GGTTGCCAAATGAACACTGAAG 58.616 45.455 0.00 0.00 0.00 3.02
3933 4400 2.223688 CGGTTGCCAAATGAACACTGAA 60.224 45.455 0.00 0.00 0.00 3.02
3934 4401 1.336440 CGGTTGCCAAATGAACACTGA 59.664 47.619 0.00 0.00 0.00 3.41
3935 4402 1.066908 ACGGTTGCCAAATGAACACTG 59.933 47.619 0.00 0.00 0.00 3.66
3936 4403 1.066908 CACGGTTGCCAAATGAACACT 59.933 47.619 0.00 0.00 0.00 3.55
3937 4404 1.202359 ACACGGTTGCCAAATGAACAC 60.202 47.619 0.00 0.00 0.00 3.32
3938 4405 1.107114 ACACGGTTGCCAAATGAACA 58.893 45.000 0.00 0.00 0.00 3.18
3939 4406 1.066303 TCACACGGTTGCCAAATGAAC 59.934 47.619 0.00 0.00 0.00 3.18
3940 4407 1.066303 GTCACACGGTTGCCAAATGAA 59.934 47.619 0.00 0.00 0.00 2.57
3941 4408 0.665835 GTCACACGGTTGCCAAATGA 59.334 50.000 0.00 0.00 0.00 2.57
3942 4409 0.667993 AGTCACACGGTTGCCAAATG 59.332 50.000 0.00 0.00 0.00 2.32
3943 4410 1.398692 AAGTCACACGGTTGCCAAAT 58.601 45.000 0.00 0.00 0.00 2.32
3944 4411 1.133407 GAAAGTCACACGGTTGCCAAA 59.867 47.619 0.00 0.00 0.00 3.28
3945 4412 0.736053 GAAAGTCACACGGTTGCCAA 59.264 50.000 0.00 0.00 0.00 4.52
3946 4413 0.107410 AGAAAGTCACACGGTTGCCA 60.107 50.000 0.00 0.00 0.00 4.92
3947 4414 1.873698 TAGAAAGTCACACGGTTGCC 58.126 50.000 0.00 0.00 0.00 4.52
3948 4415 3.614588 GTTTAGAAAGTCACACGGTTGC 58.385 45.455 0.00 0.00 0.00 4.17
3949 4416 3.843510 GCGTTTAGAAAGTCACACGGTTG 60.844 47.826 0.00 0.00 0.00 3.77
3950 4417 2.286025 GCGTTTAGAAAGTCACACGGTT 59.714 45.455 0.00 0.00 0.00 4.44
3951 4418 1.862827 GCGTTTAGAAAGTCACACGGT 59.137 47.619 0.00 0.00 0.00 4.83
3952 4419 1.862201 TGCGTTTAGAAAGTCACACGG 59.138 47.619 0.00 0.00 0.00 4.94
3953 4420 3.469629 CATGCGTTTAGAAAGTCACACG 58.530 45.455 0.00 0.00 0.00 4.49
3954 4421 3.496884 TCCATGCGTTTAGAAAGTCACAC 59.503 43.478 0.00 0.00 0.00 3.82
3955 4422 3.734463 TCCATGCGTTTAGAAAGTCACA 58.266 40.909 0.00 0.00 0.00 3.58
4119 4590 0.674581 TGGGTTCTTCTGCATCAGCG 60.675 55.000 0.00 0.00 46.23 5.18
4155 4626 0.745468 AGGTCGTATCCTTCGCTTCC 59.255 55.000 0.00 0.00 33.52 3.46
4160 4631 2.943690 TCTTCTGAGGTCGTATCCTTCG 59.056 50.000 0.00 0.00 38.02 3.79
4422 4893 0.183492 TTGCCTGCTTCACCTTCTGT 59.817 50.000 0.00 0.00 0.00 3.41
4691 5173 7.224522 ACCTACTCCGTATAAGCGAATAATT 57.775 36.000 0.00 0.00 0.00 1.40
4729 5213 5.637810 CCAAACGTTAGAGCTGATTGACTTA 59.362 40.000 0.00 0.00 0.00 2.24
4825 5520 4.999950 ACAGTGGAGTGAAGCTTTATTGAG 59.000 41.667 0.00 0.00 0.00 3.02
4852 5551 2.949177 ACCAGTGCAGTGTCCATAAA 57.051 45.000 19.93 0.00 0.00 1.40
4853 5552 2.371841 AGAACCAGTGCAGTGTCCATAA 59.628 45.455 19.93 0.00 0.00 1.90
4854 5553 1.977854 AGAACCAGTGCAGTGTCCATA 59.022 47.619 19.93 0.00 0.00 2.74
4923 5652 0.962356 CTTGTCATGTGGCCACTCCC 60.962 60.000 34.75 20.16 0.00 4.30
4927 5656 2.161855 TGAATCTTGTCATGTGGCCAC 58.838 47.619 29.67 29.67 0.00 5.01
4936 5665 4.081420 GCTAGTCTTCCCTGAATCTTGTCA 60.081 45.833 0.00 0.00 0.00 3.58
4945 5674 2.169352 GCATCTTGCTAGTCTTCCCTGA 59.831 50.000 0.00 0.00 40.96 3.86
4946 5675 2.559440 GCATCTTGCTAGTCTTCCCTG 58.441 52.381 0.00 0.00 40.96 4.45
4959 5688 0.169451 TGCAACGCATGAGCATCTTG 59.831 50.000 0.00 0.00 42.60 3.02
4960 5689 0.169672 GTGCAACGCATGAGCATCTT 59.830 50.000 0.00 0.00 41.91 2.40
4961 5690 1.798735 GTGCAACGCATGAGCATCT 59.201 52.632 0.00 0.00 41.91 2.90
4962 5691 4.372235 GTGCAACGCATGAGCATC 57.628 55.556 0.00 0.00 41.91 3.91
4973 5702 2.725723 CACATTTGATGTTCCGTGCAAC 59.274 45.455 0.00 0.00 42.70 4.17
4974 5703 2.288091 CCACATTTGATGTTCCGTGCAA 60.288 45.455 0.00 0.00 42.70 4.08
4975 5704 1.269174 CCACATTTGATGTTCCGTGCA 59.731 47.619 0.00 0.00 42.70 4.57
4976 5705 1.402720 CCCACATTTGATGTTCCGTGC 60.403 52.381 0.00 0.00 42.70 5.34
4977 5706 2.158559 TCCCACATTTGATGTTCCGTG 58.841 47.619 0.00 0.00 42.70 4.94
4978 5707 2.039746 TCTCCCACATTTGATGTTCCGT 59.960 45.455 0.00 0.00 42.70 4.69
4979 5708 2.710377 TCTCCCACATTTGATGTTCCG 58.290 47.619 0.00 0.00 42.70 4.30
4980 5709 5.467035 TTTTCTCCCACATTTGATGTTCC 57.533 39.130 0.00 0.00 42.70 3.62
4981 5710 5.243730 TCCTTTTCTCCCACATTTGATGTTC 59.756 40.000 0.00 0.00 42.70 3.18
4982 5711 5.147032 TCCTTTTCTCCCACATTTGATGTT 58.853 37.500 0.00 0.00 42.70 2.71
4983 5712 4.739793 TCCTTTTCTCCCACATTTGATGT 58.260 39.130 0.00 0.00 46.22 3.06
4984 5713 5.419788 TCATCCTTTTCTCCCACATTTGATG 59.580 40.000 0.00 0.00 0.00 3.07
4985 5714 5.582953 TCATCCTTTTCTCCCACATTTGAT 58.417 37.500 0.00 0.00 0.00 2.57
4986 5715 4.996793 TCATCCTTTTCTCCCACATTTGA 58.003 39.130 0.00 0.00 0.00 2.69
4987 5716 5.473039 GTTCATCCTTTTCTCCCACATTTG 58.527 41.667 0.00 0.00 0.00 2.32
4988 5717 4.218417 CGTTCATCCTTTTCTCCCACATTT 59.782 41.667 0.00 0.00 0.00 2.32
4989 5718 3.758554 CGTTCATCCTTTTCTCCCACATT 59.241 43.478 0.00 0.00 0.00 2.71
4990 5719 3.009033 TCGTTCATCCTTTTCTCCCACAT 59.991 43.478 0.00 0.00 0.00 3.21
4991 5720 2.370519 TCGTTCATCCTTTTCTCCCACA 59.629 45.455 0.00 0.00 0.00 4.17
4992 5721 3.003480 CTCGTTCATCCTTTTCTCCCAC 58.997 50.000 0.00 0.00 0.00 4.61
4993 5722 2.027192 CCTCGTTCATCCTTTTCTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
4994 5723 2.633488 CCTCGTTCATCCTTTTCTCCC 58.367 52.381 0.00 0.00 0.00 4.30
4995 5724 2.236395 TCCCTCGTTCATCCTTTTCTCC 59.764 50.000 0.00 0.00 0.00 3.71
4996 5725 3.611766 TCCCTCGTTCATCCTTTTCTC 57.388 47.619 0.00 0.00 0.00 2.87
4997 5726 3.307762 CCTTCCCTCGTTCATCCTTTTCT 60.308 47.826 0.00 0.00 0.00 2.52
4998 5727 3.010420 CCTTCCCTCGTTCATCCTTTTC 58.990 50.000 0.00 0.00 0.00 2.29
4999 5728 2.880167 GCCTTCCCTCGTTCATCCTTTT 60.880 50.000 0.00 0.00 0.00 2.27
5000 5729 1.340114 GCCTTCCCTCGTTCATCCTTT 60.340 52.381 0.00 0.00 0.00 3.11
5001 5730 0.253327 GCCTTCCCTCGTTCATCCTT 59.747 55.000 0.00 0.00 0.00 3.36
5002 5731 1.627297 GGCCTTCCCTCGTTCATCCT 61.627 60.000 0.00 0.00 0.00 3.24
5003 5732 1.153147 GGCCTTCCCTCGTTCATCC 60.153 63.158 0.00 0.00 0.00 3.51
5004 5733 0.253327 AAGGCCTTCCCTCGTTCATC 59.747 55.000 13.78 0.00 45.62 2.92
5005 5734 1.580059 TAAGGCCTTCCCTCGTTCAT 58.420 50.000 24.49 0.00 45.62 2.57
5006 5735 1.580059 ATAAGGCCTTCCCTCGTTCA 58.420 50.000 24.49 0.18 45.62 3.18
5007 5736 4.282703 TGTATATAAGGCCTTCCCTCGTTC 59.717 45.833 24.49 7.02 45.62 3.95
5008 5737 4.228824 TGTATATAAGGCCTTCCCTCGTT 58.771 43.478 24.49 0.00 45.62 3.85
5009 5738 3.853207 TGTATATAAGGCCTTCCCTCGT 58.147 45.455 24.49 6.13 45.62 4.18
5010 5739 4.884668 TTGTATATAAGGCCTTCCCTCG 57.115 45.455 24.49 0.00 45.62 4.63
5011 5740 6.881602 CAGATTTGTATATAAGGCCTTCCCTC 59.118 42.308 24.49 10.66 45.62 4.30
5013 5742 6.779860 TCAGATTTGTATATAAGGCCTTCCC 58.220 40.000 24.49 7.04 0.00 3.97
5014 5743 8.157476 TCTTCAGATTTGTATATAAGGCCTTCC 58.843 37.037 24.49 6.68 0.00 3.46
5015 5744 9.213799 CTCTTCAGATTTGTATATAAGGCCTTC 57.786 37.037 24.49 7.84 0.00 3.46
5016 5745 8.160106 CCTCTTCAGATTTGTATATAAGGCCTT 58.840 37.037 24.18 24.18 0.00 4.35
5017 5746 7.256835 CCCTCTTCAGATTTGTATATAAGGCCT 60.257 40.741 0.00 0.00 0.00 5.19
5018 5747 6.881602 CCCTCTTCAGATTTGTATATAAGGCC 59.118 42.308 0.00 0.00 0.00 5.19
5019 5748 6.881602 CCCCTCTTCAGATTTGTATATAAGGC 59.118 42.308 0.00 0.00 0.00 4.35
5020 5749 7.880195 CACCCCTCTTCAGATTTGTATATAAGG 59.120 40.741 0.00 0.00 0.00 2.69
5021 5750 8.432805 ACACCCCTCTTCAGATTTGTATATAAG 58.567 37.037 0.00 0.00 0.00 1.73
5022 5751 8.210946 CACACCCCTCTTCAGATTTGTATATAA 58.789 37.037 0.00 0.00 0.00 0.98
5023 5752 7.202093 CCACACCCCTCTTCAGATTTGTATATA 60.202 40.741 0.00 0.00 0.00 0.86
5024 5753 6.409695 CCACACCCCTCTTCAGATTTGTATAT 60.410 42.308 0.00 0.00 0.00 0.86
5025 5754 5.104527 CCACACCCCTCTTCAGATTTGTATA 60.105 44.000 0.00 0.00 0.00 1.47
5026 5755 4.324563 CCACACCCCTCTTCAGATTTGTAT 60.325 45.833 0.00 0.00 0.00 2.29
5027 5756 3.009033 CCACACCCCTCTTCAGATTTGTA 59.991 47.826 0.00 0.00 0.00 2.41
5028 5757 2.224867 CCACACCCCTCTTCAGATTTGT 60.225 50.000 0.00 0.00 0.00 2.83
5029 5758 2.440409 CCACACCCCTCTTCAGATTTG 58.560 52.381 0.00 0.00 0.00 2.32
5030 5759 1.355720 CCCACACCCCTCTTCAGATTT 59.644 52.381 0.00 0.00 0.00 2.17
5031 5760 0.995024 CCCACACCCCTCTTCAGATT 59.005 55.000 0.00 0.00 0.00 2.40
5032 5761 0.178861 ACCCACACCCCTCTTCAGAT 60.179 55.000 0.00 0.00 0.00 2.90
5033 5762 0.490017 TACCCACACCCCTCTTCAGA 59.510 55.000 0.00 0.00 0.00 3.27
5034 5763 1.486726 GATACCCACACCCCTCTTCAG 59.513 57.143 0.00 0.00 0.00 3.02
5035 5764 1.080498 AGATACCCACACCCCTCTTCA 59.920 52.381 0.00 0.00 0.00 3.02
5036 5765 1.880941 AGATACCCACACCCCTCTTC 58.119 55.000 0.00 0.00 0.00 2.87
5037 5766 2.361085 AAGATACCCACACCCCTCTT 57.639 50.000 0.00 0.00 0.00 2.85
5038 5767 2.361085 AAAGATACCCACACCCCTCT 57.639 50.000 0.00 0.00 0.00 3.69
5039 5768 3.089284 CAAAAAGATACCCACACCCCTC 58.911 50.000 0.00 0.00 0.00 4.30
5040 5769 2.821625 GCAAAAAGATACCCACACCCCT 60.822 50.000 0.00 0.00 0.00 4.79
5041 5770 1.548719 GCAAAAAGATACCCACACCCC 59.451 52.381 0.00 0.00 0.00 4.95
5042 5771 2.243810 TGCAAAAAGATACCCACACCC 58.756 47.619 0.00 0.00 0.00 4.61
5043 5772 4.329462 TTTGCAAAAAGATACCCACACC 57.671 40.909 10.02 0.00 0.00 4.16
5044 5773 6.481644 TCAATTTTGCAAAAAGATACCCACAC 59.518 34.615 27.10 0.00 0.00 3.82
5045 5774 6.481644 GTCAATTTTGCAAAAAGATACCCACA 59.518 34.615 27.10 1.37 0.00 4.17
5046 5775 6.481644 TGTCAATTTTGCAAAAAGATACCCAC 59.518 34.615 27.10 15.15 0.00 4.61
5047 5776 6.586344 TGTCAATTTTGCAAAAAGATACCCA 58.414 32.000 27.10 17.51 0.00 4.51
5048 5777 7.671495 ATGTCAATTTTGCAAAAAGATACCC 57.329 32.000 27.10 15.58 0.00 3.69
5049 5778 8.558700 ACAATGTCAATTTTGCAAAAAGATACC 58.441 29.630 27.10 15.86 0.00 2.73
5050 5779 9.934190 AACAATGTCAATTTTGCAAAAAGATAC 57.066 25.926 27.10 20.84 0.00 2.24
5052 5781 9.505995 GAAACAATGTCAATTTTGCAAAAAGAT 57.494 25.926 27.10 12.89 0.00 2.40
5053 5782 7.967303 GGAAACAATGTCAATTTTGCAAAAAGA 59.033 29.630 27.10 23.11 0.00 2.52
5054 5783 7.969508 AGGAAACAATGTCAATTTTGCAAAAAG 59.030 29.630 27.10 21.41 0.00 2.27
5055 5784 7.824672 AGGAAACAATGTCAATTTTGCAAAAA 58.175 26.923 27.10 11.87 0.00 1.94
5056 5785 7.388460 AGGAAACAATGTCAATTTTGCAAAA 57.612 28.000 25.76 25.76 0.00 2.44
5057 5786 6.998968 AGGAAACAATGTCAATTTTGCAAA 57.001 29.167 8.05 8.05 0.00 3.68
5058 5787 6.038050 GGAAGGAAACAATGTCAATTTTGCAA 59.962 34.615 0.00 0.00 0.00 4.08
5059 5788 5.526846 GGAAGGAAACAATGTCAATTTTGCA 59.473 36.000 0.00 0.00 0.00 4.08
5060 5789 5.759763 AGGAAGGAAACAATGTCAATTTTGC 59.240 36.000 0.00 0.00 0.00 3.68
5061 5790 9.143631 GATAGGAAGGAAACAATGTCAATTTTG 57.856 33.333 0.00 0.00 0.00 2.44
5062 5791 8.314021 GGATAGGAAGGAAACAATGTCAATTTT 58.686 33.333 0.00 0.00 0.00 1.82
5063 5792 7.362920 CGGATAGGAAGGAAACAATGTCAATTT 60.363 37.037 0.00 0.00 0.00 1.82
5064 5793 6.095440 CGGATAGGAAGGAAACAATGTCAATT 59.905 38.462 0.00 0.00 0.00 2.32
5065 5794 5.590259 CGGATAGGAAGGAAACAATGTCAAT 59.410 40.000 0.00 0.00 0.00 2.57
5066 5795 4.941263 CGGATAGGAAGGAAACAATGTCAA 59.059 41.667 0.00 0.00 0.00 3.18
5067 5796 4.019681 ACGGATAGGAAGGAAACAATGTCA 60.020 41.667 0.00 0.00 0.00 3.58
5068 5797 4.514401 ACGGATAGGAAGGAAACAATGTC 58.486 43.478 0.00 0.00 0.00 3.06
5069 5798 4.019681 TGACGGATAGGAAGGAAACAATGT 60.020 41.667 0.00 0.00 0.00 2.71
5070 5799 4.513442 TGACGGATAGGAAGGAAACAATG 58.487 43.478 0.00 0.00 0.00 2.82
5071 5800 4.469945 TCTGACGGATAGGAAGGAAACAAT 59.530 41.667 0.00 0.00 0.00 2.71
5072 5801 3.835978 TCTGACGGATAGGAAGGAAACAA 59.164 43.478 0.00 0.00 0.00 2.83
5073 5802 3.437213 TCTGACGGATAGGAAGGAAACA 58.563 45.455 0.00 0.00 0.00 2.83
5074 5803 4.674281 ATCTGACGGATAGGAAGGAAAC 57.326 45.455 0.00 0.00 32.04 2.78
5075 5804 8.486942 TTTATATCTGACGGATAGGAAGGAAA 57.513 34.615 9.78 1.82 39.89 3.13
5076 5805 8.666129 ATTTATATCTGACGGATAGGAAGGAA 57.334 34.615 9.78 0.15 39.89 3.36
5077 5806 7.067129 CGATTTATATCTGACGGATAGGAAGGA 59.933 40.741 9.78 0.00 39.89 3.36
5078 5807 7.197017 CGATTTATATCTGACGGATAGGAAGG 58.803 42.308 9.78 1.47 39.89 3.46
5079 5808 7.067129 TCCGATTTATATCTGACGGATAGGAAG 59.933 40.741 9.78 0.41 43.30 3.46
5080 5809 6.888088 TCCGATTTATATCTGACGGATAGGAA 59.112 38.462 9.78 7.20 43.30 3.36
5081 5810 6.420638 TCCGATTTATATCTGACGGATAGGA 58.579 40.000 9.78 6.82 43.30 2.94
5082 5811 6.694877 TCCGATTTATATCTGACGGATAGG 57.305 41.667 9.78 4.78 43.30 2.57
5086 5815 5.508489 GGTTGTCCGATTTATATCTGACGGA 60.508 44.000 0.00 0.00 43.79 4.69
5087 5816 4.684703 GGTTGTCCGATTTATATCTGACGG 59.315 45.833 11.21 0.00 43.79 4.79
5088 5817 5.529791 AGGTTGTCCGATTTATATCTGACG 58.470 41.667 11.21 0.00 43.79 4.35
5092 5821 9.601217 GCAATATAGGTTGTCCGATTTATATCT 57.399 33.333 0.00 0.00 39.05 1.98
5093 5822 9.378551 TGCAATATAGGTTGTCCGATTTATATC 57.621 33.333 0.00 0.00 39.05 1.63
5094 5823 9.383519 CTGCAATATAGGTTGTCCGATTTATAT 57.616 33.333 0.00 0.00 39.05 0.86
5095 5824 7.822334 CCTGCAATATAGGTTGTCCGATTTATA 59.178 37.037 0.00 0.00 39.05 0.98
5096 5825 6.655003 CCTGCAATATAGGTTGTCCGATTTAT 59.345 38.462 0.00 0.00 39.05 1.40
5097 5826 5.995282 CCTGCAATATAGGTTGTCCGATTTA 59.005 40.000 0.00 0.00 39.05 1.40
5098 5827 4.821805 CCTGCAATATAGGTTGTCCGATTT 59.178 41.667 0.00 0.00 39.05 2.17
5099 5828 4.102524 TCCTGCAATATAGGTTGTCCGATT 59.897 41.667 0.00 0.00 39.05 3.34
5100 5829 3.646162 TCCTGCAATATAGGTTGTCCGAT 59.354 43.478 0.00 0.00 39.05 4.18
5101 5830 3.035363 TCCTGCAATATAGGTTGTCCGA 58.965 45.455 0.00 0.00 39.05 4.55
5102 5831 3.469008 TCCTGCAATATAGGTTGTCCG 57.531 47.619 0.00 0.00 39.05 4.79
5103 5832 4.074970 CCATCCTGCAATATAGGTTGTCC 58.925 47.826 0.00 0.00 34.60 4.02
5104 5833 3.503748 GCCATCCTGCAATATAGGTTGTC 59.496 47.826 0.00 0.00 34.60 3.18
5105 5834 3.117550 TGCCATCCTGCAATATAGGTTGT 60.118 43.478 0.00 0.00 38.56 3.32
5106 5835 3.489355 TGCCATCCTGCAATATAGGTTG 58.511 45.455 0.00 0.00 38.56 3.77
5107 5836 3.499202 CCTGCCATCCTGCAATATAGGTT 60.499 47.826 0.00 0.00 41.51 3.50
5108 5837 2.040813 CCTGCCATCCTGCAATATAGGT 59.959 50.000 0.00 0.00 41.51 3.08
5109 5838 2.719739 CCTGCCATCCTGCAATATAGG 58.280 52.381 0.00 0.00 41.51 2.57
5110 5839 2.089980 GCCTGCCATCCTGCAATATAG 58.910 52.381 0.00 0.00 41.51 1.31
5111 5840 1.424684 TGCCTGCCATCCTGCAATATA 59.575 47.619 0.00 0.00 41.51 0.86
5112 5841 0.186630 TGCCTGCCATCCTGCAATAT 59.813 50.000 0.00 0.00 41.51 1.28
5113 5842 0.752743 GTGCCTGCCATCCTGCAATA 60.753 55.000 0.00 0.00 41.51 1.90
5114 5843 2.056223 GTGCCTGCCATCCTGCAAT 61.056 57.895 0.00 0.00 41.51 3.56
5115 5844 2.677524 GTGCCTGCCATCCTGCAA 60.678 61.111 0.00 0.00 41.51 4.08
5116 5845 3.969119 TGTGCCTGCCATCCTGCA 61.969 61.111 0.00 0.00 39.37 4.41
5117 5846 3.446570 GTGTGCCTGCCATCCTGC 61.447 66.667 0.00 0.00 0.00 4.85
5118 5847 2.753043 GGTGTGCCTGCCATCCTG 60.753 66.667 0.00 0.00 0.00 3.86
5119 5848 2.619446 ATGGTGTGCCTGCCATCCT 61.619 57.895 0.00 0.00 41.24 3.24
5120 5849 2.043652 ATGGTGTGCCTGCCATCC 60.044 61.111 0.00 0.00 41.24 3.51
5123 5852 1.378911 GATGATGGTGTGCCTGCCA 60.379 57.895 0.00 0.00 39.33 4.92
5124 5853 1.378911 TGATGATGGTGTGCCTGCC 60.379 57.895 0.00 0.00 35.27 4.85
5125 5854 1.660560 GGTGATGATGGTGTGCCTGC 61.661 60.000 0.00 0.00 35.27 4.85
5126 5855 0.322726 TGGTGATGATGGTGTGCCTG 60.323 55.000 0.00 0.00 35.27 4.85
5127 5856 0.405198 TTGGTGATGATGGTGTGCCT 59.595 50.000 0.00 0.00 35.27 4.75
5128 5857 0.527565 GTTGGTGATGATGGTGTGCC 59.472 55.000 0.00 0.00 0.00 5.01
5129 5858 1.470098 GAGTTGGTGATGATGGTGTGC 59.530 52.381 0.00 0.00 0.00 4.57
5130 5859 2.745821 CAGAGTTGGTGATGATGGTGTG 59.254 50.000 0.00 0.00 0.00 3.82
5131 5860 2.373169 ACAGAGTTGGTGATGATGGTGT 59.627 45.455 0.00 0.00 0.00 4.16
5132 5861 3.063510 ACAGAGTTGGTGATGATGGTG 57.936 47.619 0.00 0.00 0.00 4.17
5133 5862 3.795688 AACAGAGTTGGTGATGATGGT 57.204 42.857 0.00 0.00 0.00 3.55
5134 5863 5.458041 AAAAACAGAGTTGGTGATGATGG 57.542 39.130 0.00 0.00 0.00 3.51
5156 5885 9.976776 CCTAACCATGTATCTCTACTCCTATAA 57.023 37.037 0.00 0.00 0.00 0.98
5157 5886 9.347777 TCCTAACCATGTATCTCTACTCCTATA 57.652 37.037 0.00 0.00 0.00 1.31
5158 5887 8.233349 TCCTAACCATGTATCTCTACTCCTAT 57.767 38.462 0.00 0.00 0.00 2.57
5159 5888 7.516557 TCTCCTAACCATGTATCTCTACTCCTA 59.483 40.741 0.00 0.00 0.00 2.94
5160 5889 6.333168 TCTCCTAACCATGTATCTCTACTCCT 59.667 42.308 0.00 0.00 0.00 3.69
5161 5890 6.431852 GTCTCCTAACCATGTATCTCTACTCC 59.568 46.154 0.00 0.00 0.00 3.85
5162 5891 6.999272 TGTCTCCTAACCATGTATCTCTACTC 59.001 42.308 0.00 0.00 0.00 2.59
5163 5892 6.773685 GTGTCTCCTAACCATGTATCTCTACT 59.226 42.308 0.00 0.00 0.00 2.57
5164 5893 6.546403 TGTGTCTCCTAACCATGTATCTCTAC 59.454 42.308 0.00 0.00 0.00 2.59
5165 5894 6.546403 GTGTGTCTCCTAACCATGTATCTCTA 59.454 42.308 0.00 0.00 0.00 2.43
5166 5895 5.361285 GTGTGTCTCCTAACCATGTATCTCT 59.639 44.000 0.00 0.00 0.00 3.10
5167 5896 5.452077 GGTGTGTCTCCTAACCATGTATCTC 60.452 48.000 0.00 0.00 32.69 2.75
5190 5919 1.202639 TGGATATTGTGTGGCTAGCGG 60.203 52.381 9.00 0.00 0.00 5.52
5192 5921 2.738846 CGATGGATATTGTGTGGCTAGC 59.261 50.000 6.04 6.04 0.00 3.42
5193 5922 2.738846 GCGATGGATATTGTGTGGCTAG 59.261 50.000 0.00 0.00 0.00 3.42
5231 5960 9.715121 ATTGTACTAATGAAAACTTCCTTACGA 57.285 29.630 0.00 0.00 0.00 3.43
5242 5971 9.550406 CCGACCCTAATATTGTACTAATGAAAA 57.450 33.333 0.00 0.00 0.00 2.29
5246 5975 7.601508 GGAACCGACCCTAATATTGTACTAATG 59.398 40.741 0.00 0.00 0.00 1.90
5282 6011 2.185310 CTTGGGACCTTCGGGACTGG 62.185 65.000 0.00 0.00 38.77 4.00
5299 6028 1.668826 TAGCCATCTGTCCCCAACTT 58.331 50.000 0.00 0.00 0.00 2.66
5304 6033 3.217626 CAAGATTTAGCCATCTGTCCCC 58.782 50.000 0.00 0.00 33.52 4.81
5319 6048 2.098607 CCATCAATCTGCGCACAAGATT 59.901 45.455 15.39 15.39 33.10 2.40
5329 6058 3.270877 ACGTTAACCTCCATCAATCTGC 58.729 45.455 0.00 0.00 0.00 4.26
5333 6062 5.556915 TCAGAAACGTTAACCTCCATCAAT 58.443 37.500 0.00 0.00 0.00 2.57
5334 6063 4.963373 TCAGAAACGTTAACCTCCATCAA 58.037 39.130 0.00 0.00 0.00 2.57
5339 6068 3.371285 GCTCATCAGAAACGTTAACCTCC 59.629 47.826 0.00 0.00 0.00 4.30
5342 6071 3.125316 CAGGCTCATCAGAAACGTTAACC 59.875 47.826 0.00 0.00 0.00 2.85
5349 6078 2.097142 GTGCATCAGGCTCATCAGAAAC 59.903 50.000 0.00 0.00 45.15 2.78
5350 6079 2.026542 AGTGCATCAGGCTCATCAGAAA 60.027 45.455 0.00 0.00 45.15 2.52
5353 6082 1.941294 GAAGTGCATCAGGCTCATCAG 59.059 52.381 0.00 0.00 45.15 2.90
5367 6096 2.427095 ACCAAAGTTTCCAGTGAAGTGC 59.573 45.455 0.00 0.00 0.00 4.40
5369 6098 3.694566 GACACCAAAGTTTCCAGTGAAGT 59.305 43.478 13.99 0.00 32.76 3.01
5378 6107 4.983671 AAACTCCAGACACCAAAGTTTC 57.016 40.909 0.00 0.00 35.80 2.78
5384 6113 3.358111 TGTGAAAACTCCAGACACCAA 57.642 42.857 0.00 0.00 0.00 3.67
5386 6115 3.882888 TCATTGTGAAAACTCCAGACACC 59.117 43.478 0.00 0.00 0.00 4.16
5448 6178 6.048073 TCTTCCAAATATGAAGCGATTTCG 57.952 37.500 0.00 0.00 39.24 3.46
5451 6181 9.956720 CTTTAATCTTCCAAATATGAAGCGATT 57.043 29.630 0.00 0.00 39.24 3.34
5455 6185 6.925718 GCCCTTTAATCTTCCAAATATGAAGC 59.074 38.462 0.00 0.00 39.24 3.86
5498 6229 2.360483 CCTTGTGCACAAACCACATACA 59.640 45.455 30.62 7.03 42.23 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.