Multiple sequence alignment - TraesCS3B01G288000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G288000 chr3B 100.000 2849 0 0 1 2849 462858105 462855257 0.000000e+00 5262.0
1 TraesCS3B01G288000 chr3B 96.970 33 0 1 2388 2419 84762837 84762869 1.000000e-03 54.7
2 TraesCS3B01G288000 chr3A 91.901 1815 94 26 579 2359 477416468 477414673 0.000000e+00 2488.0
3 TraesCS3B01G288000 chr3A 82.908 509 60 20 2045 2531 477414150 477413647 1.570000e-117 433.0
4 TraesCS3B01G288000 chr3A 94.475 181 6 3 1 180 477416825 477416648 2.800000e-70 276.0
5 TraesCS3B01G288000 chr3A 81.696 224 26 14 2203 2417 37474680 37474897 3.770000e-39 172.0
6 TraesCS3B01G288000 chr3A 96.078 102 4 0 185 286 477416568 477416467 1.760000e-37 167.0
7 TraesCS3B01G288000 chr3D 90.605 1224 73 25 1236 2436 358170016 358168812 0.000000e+00 1585.0
8 TraesCS3B01G288000 chr3D 95.033 604 21 3 579 1173 358170934 358170331 0.000000e+00 941.0
9 TraesCS3B01G288000 chr3D 95.376 173 4 3 1 172 358171447 358171278 3.620000e-69 272.0
10 TraesCS3B01G288000 chr3D 93.805 113 4 2 175 286 358171043 358170933 1.760000e-37 167.0
11 TraesCS3B01G288000 chr3D 86.207 58 6 2 2391 2447 419970502 419970446 8.520000e-06 62.1
12 TraesCS3B01G288000 chr2A 96.032 252 9 1 283 534 723523026 723523276 2.640000e-110 409.0
13 TraesCS3B01G288000 chr2B 96.000 250 9 1 285 534 694533646 694533894 3.420000e-109 405.0
14 TraesCS3B01G288000 chr5A 95.200 250 10 2 286 534 510187563 510187811 7.400000e-106 394.0
15 TraesCS3B01G288000 chr5A 95.200 250 11 1 285 534 673688544 673688792 7.400000e-106 394.0
16 TraesCS3B01G288000 chr5A 93.774 257 15 1 278 534 547337182 547336927 4.450000e-103 385.0
17 TraesCS3B01G288000 chr4B 95.181 249 11 1 286 534 129713016 129713263 2.660000e-105 392.0
18 TraesCS3B01G288000 chr1B 94.841 252 12 1 283 534 539644204 539644454 2.660000e-105 392.0
19 TraesCS3B01G288000 chr6B 94.800 250 13 0 285 534 445028190 445027941 9.570000e-105 390.0
20 TraesCS3B01G288000 chr7B 91.697 277 20 3 286 562 146898341 146898614 5.760000e-102 381.0
21 TraesCS3B01G288000 chr4A 83.591 323 26 10 288 586 126259016 126259335 7.770000e-71 278.0
22 TraesCS3B01G288000 chr4A 80.488 205 32 7 2203 2399 247866526 247866322 1.770000e-32 150.0
23 TraesCS3B01G288000 chr4A 76.543 243 34 17 2203 2428 253706569 253706333 8.340000e-21 111.0
24 TraesCS3B01G288000 chr6A 83.282 323 26 10 288 586 134324246 134323928 3.620000e-69 272.0
25 TraesCS3B01G288000 chr6A 82.972 323 28 11 288 586 523642774 523643093 1.680000e-67 267.0
26 TraesCS3B01G288000 chr6A 82.663 323 28 11 288 586 94823135 94822817 7.830000e-66 261.0
27 TraesCS3B01G288000 chr6A 80.717 223 35 7 2203 2417 200593760 200593982 1.760000e-37 167.0
28 TraesCS3B01G288000 chr6A 98.113 53 1 0 534 586 161549120 161549068 3.020000e-15 93.5
29 TraesCS3B01G288000 chr7A 81.962 316 30 9 297 588 113897882 113897570 2.840000e-60 243.0
30 TraesCS3B01G288000 chr5D 79.257 323 23 13 288 586 419976037 419976339 4.850000e-43 185.0
31 TraesCS3B01G288000 chr5D 80.909 220 31 8 2189 2399 334934594 334934377 2.270000e-36 163.0
32 TraesCS3B01G288000 chr5D 87.143 70 8 1 517 585 340533064 340532995 8.460000e-11 78.7
33 TraesCS3B01G288000 chrUn 81.860 215 31 7 2244 2451 92702160 92701947 1.050000e-39 174.0
34 TraesCS3B01G288000 chr2D 78.927 261 30 15 2203 2446 200777429 200777681 1.370000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G288000 chr3B 462855257 462858105 2848 True 5262.00 5262 100.00000 1 2849 1 chr3B.!!$R1 2848
1 TraesCS3B01G288000 chr3A 477413647 477416825 3178 True 841.00 2488 91.34050 1 2531 4 chr3A.!!$R1 2530
2 TraesCS3B01G288000 chr3D 358168812 358171447 2635 True 741.25 1585 93.70475 1 2436 4 chr3D.!!$R2 2435

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
708 943 0.03496 TCTCTGACAGGTCGAGAGGG 60.035 60.0 19.39 4.65 35.76 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2481 3896 0.038251 GATGAGACATGCGCCGGATA 60.038 55.0 5.05 0.0 0.0 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 1.539827 CACCAAATTCCTTCACGTCCC 59.460 52.381 0.00 0.00 0.00 4.46
82 83 2.426738 CCCAATCGATTTTAGGCTTGCA 59.573 45.455 8.21 0.00 0.00 4.08
83 84 3.119173 CCCAATCGATTTTAGGCTTGCAA 60.119 43.478 8.21 0.00 0.00 4.08
88 89 5.384063 TCGATTTTAGGCTTGCAAAATCA 57.616 34.783 23.52 13.66 45.26 2.57
161 163 6.924111 AGACGCAATCATATGTTTCCTTTTT 58.076 32.000 1.90 0.00 0.00 1.94
233 466 2.009051 CACGCAGCATCATACCAAGAA 58.991 47.619 0.00 0.00 0.00 2.52
255 488 4.741781 CGGCCAAAGCTGCGTTCG 62.742 66.667 2.24 0.00 38.90 3.95
257 490 2.637025 GCCAAAGCTGCGTTCGAA 59.363 55.556 0.00 0.00 35.50 3.71
279 512 2.185262 GCTGTAAAGCAATAAAGCGCC 58.815 47.619 2.29 0.00 40.15 6.53
286 519 0.170339 GCAATAAAGCGCCGGAACTT 59.830 50.000 5.05 4.21 0.00 2.66
287 520 1.399089 GCAATAAAGCGCCGGAACTTA 59.601 47.619 5.05 0.00 0.00 2.24
288 521 2.538939 GCAATAAAGCGCCGGAACTTAG 60.539 50.000 5.05 0.32 0.00 2.18
289 522 1.949465 ATAAAGCGCCGGAACTTAGG 58.051 50.000 5.05 0.00 0.00 2.69
295 528 3.400188 CCGGAACTTAGGCCCTGT 58.600 61.111 0.00 0.00 0.00 4.00
296 529 1.683441 CCGGAACTTAGGCCCTGTT 59.317 57.895 0.00 1.52 0.00 3.16
297 530 0.037734 CCGGAACTTAGGCCCTGTTT 59.962 55.000 0.00 0.00 0.00 2.83
298 531 1.165270 CGGAACTTAGGCCCTGTTTG 58.835 55.000 0.00 0.00 0.00 2.93
299 532 1.545841 GGAACTTAGGCCCTGTTTGG 58.454 55.000 0.00 0.00 0.00 3.28
300 533 1.203013 GGAACTTAGGCCCTGTTTGGT 60.203 52.381 0.00 0.00 0.00 3.67
301 534 2.594131 GAACTTAGGCCCTGTTTGGTT 58.406 47.619 0.00 0.00 0.00 3.67
302 535 2.767644 ACTTAGGCCCTGTTTGGTTT 57.232 45.000 0.00 0.00 0.00 3.27
303 536 2.594131 ACTTAGGCCCTGTTTGGTTTC 58.406 47.619 0.00 0.00 0.00 2.78
304 537 2.091555 ACTTAGGCCCTGTTTGGTTTCA 60.092 45.455 0.00 0.00 0.00 2.69
305 538 2.757894 TAGGCCCTGTTTGGTTTCAA 57.242 45.000 0.00 0.00 0.00 2.69
306 539 1.872773 AGGCCCTGTTTGGTTTCAAA 58.127 45.000 0.00 0.00 40.23 2.69
307 540 2.407562 AGGCCCTGTTTGGTTTCAAAT 58.592 42.857 0.00 0.00 43.73 2.32
308 541 3.582164 AGGCCCTGTTTGGTTTCAAATA 58.418 40.909 0.00 0.00 43.73 1.40
309 542 3.970640 AGGCCCTGTTTGGTTTCAAATAA 59.029 39.130 0.00 0.00 43.73 1.40
310 543 4.410555 AGGCCCTGTTTGGTTTCAAATAAA 59.589 37.500 0.00 0.00 43.73 1.40
311 544 5.073008 AGGCCCTGTTTGGTTTCAAATAAAT 59.927 36.000 0.00 0.00 43.73 1.40
312 545 5.411361 GGCCCTGTTTGGTTTCAAATAAATC 59.589 40.000 0.00 0.00 43.73 2.17
313 546 5.994668 GCCCTGTTTGGTTTCAAATAAATCA 59.005 36.000 0.00 0.00 43.73 2.57
314 547 6.073276 GCCCTGTTTGGTTTCAAATAAATCAC 60.073 38.462 0.00 0.00 43.73 3.06
315 548 6.426633 CCCTGTTTGGTTTCAAATAAATCACC 59.573 38.462 0.00 0.00 43.73 4.02
316 549 6.989169 CCTGTTTGGTTTCAAATAAATCACCA 59.011 34.615 0.00 0.00 43.73 4.17
317 550 7.497249 CCTGTTTGGTTTCAAATAAATCACCAA 59.503 33.333 0.00 0.00 43.73 3.67
318 551 8.202745 TGTTTGGTTTCAAATAAATCACCAAC 57.797 30.769 1.03 0.00 42.59 3.77
319 552 8.043710 TGTTTGGTTTCAAATAAATCACCAACT 58.956 29.630 1.03 0.00 42.59 3.16
320 553 8.888716 GTTTGGTTTCAAATAAATCACCAACTT 58.111 29.630 1.03 0.00 42.59 2.66
334 567 8.617290 AATCACCAACTTATAAGTCGAAAAGT 57.383 30.769 18.28 7.29 38.57 2.66
335 568 9.715121 AATCACCAACTTATAAGTCGAAAAGTA 57.285 29.630 18.28 1.35 38.57 2.24
336 569 9.715121 ATCACCAACTTATAAGTCGAAAAGTAA 57.285 29.630 18.28 0.00 38.57 2.24
337 570 9.545105 TCACCAACTTATAAGTCGAAAAGTAAA 57.455 29.630 18.28 1.07 38.57 2.01
362 595 7.913674 AAAAAGTGACTTATTTTGCCAAACA 57.086 28.000 0.00 0.00 0.00 2.83
363 596 7.538303 AAAAGTGACTTATTTTGCCAAACAG 57.462 32.000 0.00 0.00 0.00 3.16
364 597 6.463995 AAGTGACTTATTTTGCCAAACAGA 57.536 33.333 0.00 0.00 0.00 3.41
365 598 5.831997 AGTGACTTATTTTGCCAAACAGAC 58.168 37.500 0.00 0.00 0.00 3.51
366 599 4.982295 GTGACTTATTTTGCCAAACAGACC 59.018 41.667 0.00 0.00 0.00 3.85
367 600 4.038642 TGACTTATTTTGCCAAACAGACCC 59.961 41.667 0.00 0.00 0.00 4.46
368 601 3.005367 ACTTATTTTGCCAAACAGACCCG 59.995 43.478 0.00 0.00 0.00 5.28
369 602 1.698506 ATTTTGCCAAACAGACCCGA 58.301 45.000 0.00 0.00 0.00 5.14
370 603 0.741915 TTTTGCCAAACAGACCCGAC 59.258 50.000 0.00 0.00 0.00 4.79
371 604 0.106918 TTTGCCAAACAGACCCGACT 60.107 50.000 0.00 0.00 0.00 4.18
372 605 0.106918 TTGCCAAACAGACCCGACTT 60.107 50.000 0.00 0.00 0.00 3.01
373 606 0.759959 TGCCAAACAGACCCGACTTA 59.240 50.000 0.00 0.00 0.00 2.24
374 607 1.349688 TGCCAAACAGACCCGACTTAT 59.650 47.619 0.00 0.00 0.00 1.73
375 608 2.568062 TGCCAAACAGACCCGACTTATA 59.432 45.455 0.00 0.00 0.00 0.98
376 609 3.008157 TGCCAAACAGACCCGACTTATAA 59.992 43.478 0.00 0.00 0.00 0.98
377 610 3.621715 GCCAAACAGACCCGACTTATAAG 59.378 47.826 11.05 11.05 0.00 1.73
378 611 4.828829 CCAAACAGACCCGACTTATAAGT 58.171 43.478 18.05 18.05 43.16 2.24
397 630 5.836024 AAGTCACCCCAACTTATAAGTCA 57.164 39.130 18.28 0.00 38.57 3.41
398 631 6.388619 AAGTCACCCCAACTTATAAGTCAT 57.611 37.500 18.28 1.19 38.57 3.06
399 632 7.504926 AAGTCACCCCAACTTATAAGTCATA 57.495 36.000 18.28 0.00 38.57 2.15
400 633 7.504926 AGTCACCCCAACTTATAAGTCATAA 57.495 36.000 18.28 0.00 38.57 1.90
412 645 7.859325 TTATAAGTCATAAGTTGCTTCACCC 57.141 36.000 0.00 0.00 0.00 4.61
413 646 3.073274 AGTCATAAGTTGCTTCACCCC 57.927 47.619 0.00 0.00 0.00 4.95
414 647 2.375174 AGTCATAAGTTGCTTCACCCCA 59.625 45.455 0.00 0.00 0.00 4.96
415 648 3.153919 GTCATAAGTTGCTTCACCCCAA 58.846 45.455 0.00 0.00 0.00 4.12
416 649 3.057526 GTCATAAGTTGCTTCACCCCAAC 60.058 47.826 0.00 0.00 41.13 3.77
418 651 3.924576 AGTTGCTTCACCCCAACTT 57.075 47.368 0.56 0.00 46.86 2.66
420 653 3.306472 AGTTGCTTCACCCCAACTTAA 57.694 42.857 0.56 0.00 46.86 1.85
421 654 3.637769 AGTTGCTTCACCCCAACTTAAA 58.362 40.909 0.56 0.00 46.86 1.52
422 655 4.027437 AGTTGCTTCACCCCAACTTAAAA 58.973 39.130 0.56 0.00 46.86 1.52
423 656 4.116961 GTTGCTTCACCCCAACTTAAAAC 58.883 43.478 0.00 0.00 38.55 2.43
424 657 3.637769 TGCTTCACCCCAACTTAAAACT 58.362 40.909 0.00 0.00 0.00 2.66
425 658 4.027437 TGCTTCACCCCAACTTAAAACTT 58.973 39.130 0.00 0.00 0.00 2.66
426 659 5.202004 TGCTTCACCCCAACTTAAAACTTA 58.798 37.500 0.00 0.00 0.00 2.24
427 660 5.836358 TGCTTCACCCCAACTTAAAACTTAT 59.164 36.000 0.00 0.00 0.00 1.73
428 661 7.005296 TGCTTCACCCCAACTTAAAACTTATA 58.995 34.615 0.00 0.00 0.00 0.98
429 662 7.506261 TGCTTCACCCCAACTTAAAACTTATAA 59.494 33.333 0.00 0.00 0.00 0.98
430 663 8.361889 GCTTCACCCCAACTTAAAACTTATAAA 58.638 33.333 0.00 0.00 0.00 1.40
433 666 9.589461 TCACCCCAACTTAAAACTTATAAATCA 57.411 29.630 0.00 0.00 0.00 2.57
434 667 9.634163 CACCCCAACTTAAAACTTATAAATCAC 57.366 33.333 0.00 0.00 0.00 3.06
435 668 8.809066 ACCCCAACTTAAAACTTATAAATCACC 58.191 33.333 0.00 0.00 0.00 4.02
436 669 8.255206 CCCCAACTTAAAACTTATAAATCACCC 58.745 37.037 0.00 0.00 0.00 4.61
437 670 8.255206 CCCAACTTAAAACTTATAAATCACCCC 58.745 37.037 0.00 0.00 0.00 4.95
438 671 8.255206 CCAACTTAAAACTTATAAATCACCCCC 58.745 37.037 0.00 0.00 0.00 5.40
439 672 9.031537 CAACTTAAAACTTATAAATCACCCCCT 57.968 33.333 0.00 0.00 0.00 4.79
440 673 9.610104 AACTTAAAACTTATAAATCACCCCCTT 57.390 29.630 0.00 0.00 0.00 3.95
441 674 9.610104 ACTTAAAACTTATAAATCACCCCCTTT 57.390 29.630 0.00 0.00 0.00 3.11
444 677 5.932619 ACTTATAAATCACCCCCTTTTGC 57.067 39.130 0.00 0.00 0.00 3.68
445 678 5.337788 ACTTATAAATCACCCCCTTTTGCA 58.662 37.500 0.00 0.00 0.00 4.08
446 679 5.963865 ACTTATAAATCACCCCCTTTTGCAT 59.036 36.000 0.00 0.00 0.00 3.96
447 680 4.758773 ATAAATCACCCCCTTTTGCATG 57.241 40.909 0.00 0.00 0.00 4.06
448 681 1.278537 AATCACCCCCTTTTGCATGG 58.721 50.000 0.00 0.00 0.00 3.66
449 682 0.618393 ATCACCCCCTTTTGCATGGG 60.618 55.000 11.68 11.68 44.03 4.00
450 683 2.950970 ACCCCCTTTTGCATGGGT 59.049 55.556 15.82 11.03 46.50 4.51
451 684 3.712287 CCCCCTTTTGCATGGGTC 58.288 61.111 15.82 0.00 41.82 4.46
452 685 1.989508 CCCCCTTTTGCATGGGTCC 60.990 63.158 15.82 0.00 41.82 4.46
453 686 1.989508 CCCCTTTTGCATGGGTCCC 60.990 63.158 15.82 0.00 41.82 4.46
454 687 1.229145 CCCTTTTGCATGGGTCCCA 60.229 57.895 14.64 14.64 38.65 4.37
455 688 1.543944 CCCTTTTGCATGGGTCCCAC 61.544 60.000 14.57 1.42 35.80 4.61
456 689 1.543944 CCTTTTGCATGGGTCCCACC 61.544 60.000 14.57 8.17 35.80 4.61
457 690 0.831288 CTTTTGCATGGGTCCCACCA 60.831 55.000 14.57 11.02 46.24 4.17
458 691 1.118356 TTTTGCATGGGTCCCACCAC 61.118 55.000 14.57 6.21 44.72 4.16
459 692 3.521765 TTGCATGGGTCCCACCACC 62.522 63.158 14.57 2.26 44.72 4.61
460 693 3.661648 GCATGGGTCCCACCACCT 61.662 66.667 14.57 0.00 44.72 4.00
461 694 2.356278 CATGGGTCCCACCACCTG 59.644 66.667 14.57 2.94 44.72 4.00
462 695 3.661648 ATGGGTCCCACCACCTGC 61.662 66.667 14.57 0.00 44.72 4.85
464 697 3.661648 GGGTCCCACCACCTGCAT 61.662 66.667 1.78 0.00 41.02 3.96
465 698 2.361610 GGTCCCACCACCTGCATG 60.362 66.667 0.00 0.00 38.42 4.06
466 699 2.756400 GTCCCACCACCTGCATGA 59.244 61.111 0.00 0.00 0.00 3.07
467 700 1.304282 GTCCCACCACCTGCATGAT 59.696 57.895 0.00 0.00 0.00 2.45
468 701 1.033746 GTCCCACCACCTGCATGATG 61.034 60.000 0.00 0.00 0.00 3.07
469 702 1.000521 CCCACCACCTGCATGATGT 60.001 57.895 0.00 0.00 0.00 3.06
470 703 1.317431 CCCACCACCTGCATGATGTG 61.317 60.000 0.00 0.00 0.00 3.21
475 708 2.863401 CACCTGCATGATGTGGATTG 57.137 50.000 12.17 0.07 0.00 2.67
476 709 1.407618 CACCTGCATGATGTGGATTGG 59.592 52.381 12.17 1.26 0.00 3.16
477 710 1.006281 ACCTGCATGATGTGGATTGGT 59.994 47.619 12.17 1.78 0.00 3.67
478 711 1.407618 CCTGCATGATGTGGATTGGTG 59.592 52.381 0.00 0.00 0.00 4.17
479 712 2.097036 CTGCATGATGTGGATTGGTGT 58.903 47.619 0.00 0.00 0.00 4.16
480 713 1.819903 TGCATGATGTGGATTGGTGTG 59.180 47.619 0.00 0.00 0.00 3.82
481 714 1.135527 GCATGATGTGGATTGGTGTGG 59.864 52.381 0.00 0.00 0.00 4.17
482 715 2.725637 CATGATGTGGATTGGTGTGGA 58.274 47.619 0.00 0.00 0.00 4.02
483 716 2.967745 TGATGTGGATTGGTGTGGAA 57.032 45.000 0.00 0.00 0.00 3.53
484 717 3.235750 TGATGTGGATTGGTGTGGAAA 57.764 42.857 0.00 0.00 0.00 3.13
485 718 3.156293 TGATGTGGATTGGTGTGGAAAG 58.844 45.455 0.00 0.00 0.00 2.62
486 719 1.993956 TGTGGATTGGTGTGGAAAGG 58.006 50.000 0.00 0.00 0.00 3.11
487 720 1.216678 TGTGGATTGGTGTGGAAAGGT 59.783 47.619 0.00 0.00 0.00 3.50
488 721 1.613437 GTGGATTGGTGTGGAAAGGTG 59.387 52.381 0.00 0.00 0.00 4.00
489 722 1.216678 TGGATTGGTGTGGAAAGGTGT 59.783 47.619 0.00 0.00 0.00 4.16
490 723 1.613437 GGATTGGTGTGGAAAGGTGTG 59.387 52.381 0.00 0.00 0.00 3.82
491 724 2.306847 GATTGGTGTGGAAAGGTGTGT 58.693 47.619 0.00 0.00 0.00 3.72
492 725 1.757682 TTGGTGTGGAAAGGTGTGTC 58.242 50.000 0.00 0.00 0.00 3.67
493 726 0.621082 TGGTGTGGAAAGGTGTGTCA 59.379 50.000 0.00 0.00 0.00 3.58
494 727 1.308998 GGTGTGGAAAGGTGTGTCAG 58.691 55.000 0.00 0.00 0.00 3.51
495 728 1.308998 GTGTGGAAAGGTGTGTCAGG 58.691 55.000 0.00 0.00 0.00 3.86
496 729 0.916086 TGTGGAAAGGTGTGTCAGGT 59.084 50.000 0.00 0.00 0.00 4.00
497 730 1.308998 GTGGAAAGGTGTGTCAGGTG 58.691 55.000 0.00 0.00 0.00 4.00
498 731 1.134220 GTGGAAAGGTGTGTCAGGTGA 60.134 52.381 0.00 0.00 0.00 4.02
499 732 1.134220 TGGAAAGGTGTGTCAGGTGAC 60.134 52.381 2.99 2.99 44.97 3.67
500 733 1.141053 GGAAAGGTGTGTCAGGTGACT 59.859 52.381 11.31 0.00 44.99 3.41
501 734 2.421529 GGAAAGGTGTGTCAGGTGACTT 60.422 50.000 11.31 0.00 44.99 3.01
502 735 3.181458 GGAAAGGTGTGTCAGGTGACTTA 60.181 47.826 11.31 0.00 44.99 2.24
503 736 4.505039 GGAAAGGTGTGTCAGGTGACTTAT 60.505 45.833 11.31 0.00 44.99 1.73
504 737 5.279809 GGAAAGGTGTGTCAGGTGACTTATA 60.280 44.000 11.31 0.00 44.99 0.98
505 738 5.818678 AAGGTGTGTCAGGTGACTTATAA 57.181 39.130 11.31 0.00 44.99 0.98
506 739 5.407407 AGGTGTGTCAGGTGACTTATAAG 57.593 43.478 11.05 11.05 44.99 1.73
507 740 4.838986 AGGTGTGTCAGGTGACTTATAAGT 59.161 41.667 18.05 18.05 44.99 2.24
528 761 2.499214 GGTGACAACCAAACAGGCA 58.501 52.632 0.00 0.00 46.75 4.75
529 762 1.039856 GGTGACAACCAAACAGGCAT 58.960 50.000 0.00 0.00 46.75 4.40
530 763 1.269726 GGTGACAACCAAACAGGCATG 60.270 52.381 0.00 0.00 46.75 4.06
531 764 1.680735 GTGACAACCAAACAGGCATGA 59.319 47.619 4.84 0.00 43.14 3.07
532 765 1.680735 TGACAACCAAACAGGCATGAC 59.319 47.619 4.84 0.00 43.14 3.06
533 766 1.956477 GACAACCAAACAGGCATGACT 59.044 47.619 4.84 0.00 43.14 3.41
534 767 1.956477 ACAACCAAACAGGCATGACTC 59.044 47.619 4.84 0.00 43.14 3.36
535 768 1.955778 CAACCAAACAGGCATGACTCA 59.044 47.619 4.84 0.00 43.14 3.41
536 769 1.609208 ACCAAACAGGCATGACTCAC 58.391 50.000 4.84 0.00 43.14 3.51
537 770 0.883833 CCAAACAGGCATGACTCACC 59.116 55.000 4.84 0.00 0.00 4.02
538 771 1.546323 CCAAACAGGCATGACTCACCT 60.546 52.381 4.84 0.00 0.00 4.00
545 778 4.785346 AGGCATGACTCACCTGATTTAT 57.215 40.909 0.00 0.00 30.82 1.40
546 779 5.894298 AGGCATGACTCACCTGATTTATA 57.106 39.130 0.00 0.00 30.82 0.98
547 780 6.252599 AGGCATGACTCACCTGATTTATAA 57.747 37.500 0.00 0.00 30.82 0.98
548 781 6.294473 AGGCATGACTCACCTGATTTATAAG 58.706 40.000 0.00 0.00 30.82 1.73
549 782 6.058183 GGCATGACTCACCTGATTTATAAGT 58.942 40.000 0.00 0.00 0.00 2.24
550 783 6.203723 GGCATGACTCACCTGATTTATAAGTC 59.796 42.308 0.00 1.17 33.86 3.01
551 784 6.763135 GCATGACTCACCTGATTTATAAGTCA 59.237 38.462 9.97 9.97 43.89 3.41
552 785 7.042187 GCATGACTCACCTGATTTATAAGTCAG 60.042 40.741 24.08 24.08 43.25 3.51
569 802 4.015872 GTCAGGTGACTTATTGGAACCA 57.984 45.455 2.72 0.00 41.65 3.67
570 803 4.394729 GTCAGGTGACTTATTGGAACCAA 58.605 43.478 8.75 8.75 41.65 3.67
571 804 4.825085 GTCAGGTGACTTATTGGAACCAAA 59.175 41.667 10.36 0.00 41.65 3.28
572 805 4.825085 TCAGGTGACTTATTGGAACCAAAC 59.175 41.667 10.36 3.26 40.21 2.93
573 806 4.582656 CAGGTGACTTATTGGAACCAAACA 59.417 41.667 10.36 0.00 40.21 2.83
574 807 4.827284 AGGTGACTTATTGGAACCAAACAG 59.173 41.667 10.36 11.01 37.44 3.16
575 808 4.022329 GGTGACTTATTGGAACCAAACAGG 60.022 45.833 10.36 5.07 45.67 4.00
576 809 3.572255 TGACTTATTGGAACCAAACAGGC 59.428 43.478 10.36 11.26 43.14 4.85
577 810 2.897326 ACTTATTGGAACCAAACAGGCC 59.103 45.455 10.36 0.00 43.14 5.19
578 811 1.931635 TATTGGAACCAAACAGGCCC 58.068 50.000 10.36 0.00 43.14 5.80
579 812 0.190815 ATTGGAACCAAACAGGCCCT 59.809 50.000 10.36 0.00 43.14 5.19
592 825 4.287766 ACAGGCCCTAAACTAAACTGAG 57.712 45.455 0.00 0.00 0.00 3.35
594 827 2.913617 AGGCCCTAAACTAAACTGAGCT 59.086 45.455 0.00 0.00 0.00 4.09
595 828 3.010420 GGCCCTAAACTAAACTGAGCTG 58.990 50.000 0.00 0.00 0.00 4.24
677 912 1.787155 CGTCATTTTATCCTCGAGGCG 59.213 52.381 27.39 16.47 34.44 5.52
708 943 0.034960 TCTCTGACAGGTCGAGAGGG 60.035 60.000 19.39 4.65 35.76 4.30
934 1173 5.692204 CCGCCTGAAATACTAATACTGACTG 59.308 44.000 0.00 0.00 0.00 3.51
935 1174 5.692204 CGCCTGAAATACTAATACTGACTGG 59.308 44.000 0.00 0.00 0.00 4.00
936 1175 6.583562 GCCTGAAATACTAATACTGACTGGT 58.416 40.000 0.00 0.00 0.00 4.00
939 1178 9.132923 CCTGAAATACTAATACTGACTGGTAGA 57.867 37.037 0.00 0.00 0.00 2.59
946 1188 8.514330 ACTAATACTGACTGGTAGAAGAAGAG 57.486 38.462 0.00 0.00 0.00 2.85
1133 1385 2.159282 ACGGCTTCTTCATAGGTACGTG 60.159 50.000 0.00 0.00 0.00 4.49
1145 1397 2.048222 TACGTGCTGCTGACTGGC 60.048 61.111 0.00 0.00 0.00 4.85
1248 1801 2.099263 TCCTTGAGCTGAGCGTATGTAC 59.901 50.000 0.00 0.00 0.00 2.90
1542 2101 5.842907 ACTCTCTTTGTATGCGTGCATATA 58.157 37.500 16.79 11.94 40.49 0.86
1551 2110 6.585852 TGTATGCGTGCATATATAACGTTTG 58.414 36.000 16.79 0.00 40.49 2.93
1552 2111 3.867665 TGCGTGCATATATAACGTTTGC 58.132 40.909 5.91 10.74 39.45 3.68
1688 2254 2.620251 TTGATCAGCATTCGTAGGGG 57.380 50.000 0.00 0.00 0.00 4.79
1694 2260 2.158957 TCAGCATTCGTAGGGGATCAAC 60.159 50.000 0.00 0.00 0.00 3.18
1696 2262 3.069586 CAGCATTCGTAGGGGATCAACTA 59.930 47.826 0.00 0.00 0.00 2.24
1737 2303 7.547019 ACTGATGTGGCACGATATAATCATTAG 59.453 37.037 13.77 6.21 0.00 1.73
1758 2324 4.839121 AGTAACTGTTTGTGTTGGTCTGA 58.161 39.130 0.00 0.00 0.00 3.27
1878 2444 1.066858 TCAAGTGGGCAAGAGATCGAC 60.067 52.381 0.00 0.00 0.00 4.20
1880 2446 2.145397 AGTGGGCAAGAGATCGACTA 57.855 50.000 0.00 0.00 0.00 2.59
1993 2559 7.609760 TGTATACATCTTTGATGTGGTGTTC 57.390 36.000 19.66 7.75 33.76 3.18
1998 2564 6.638610 ACATCTTTGATGTGGTGTTCAAAAA 58.361 32.000 11.77 0.00 40.31 1.94
2025 2591 4.629634 TGTATCGTGTGTTTATTGCTGAGG 59.370 41.667 0.00 0.00 0.00 3.86
2038 2604 1.589716 GCTGAGGCGGAAATGCACTT 61.590 55.000 0.00 0.00 36.28 3.16
2065 2631 2.028930 TGTGTGAGTGTGTGTGTGTGTA 60.029 45.455 0.00 0.00 0.00 2.90
2067 2633 3.001228 GTGTGAGTGTGTGTGTGTGTATG 59.999 47.826 0.00 0.00 0.00 2.39
2068 2634 3.194861 GTGAGTGTGTGTGTGTGTATGT 58.805 45.455 0.00 0.00 0.00 2.29
2069 2635 4.142138 TGTGAGTGTGTGTGTGTGTATGTA 60.142 41.667 0.00 0.00 0.00 2.29
2079 3477 2.540516 TGTGTGTATGTACGTTGTGTGC 59.459 45.455 0.00 0.00 0.00 4.57
2082 3480 2.219216 GTGTATGTACGTTGTGTGCGTT 59.781 45.455 0.00 0.00 42.85 4.84
2133 3531 5.229423 CGTGATTTGTTGATTGGAAACCAT 58.771 37.500 0.00 0.00 31.53 3.55
2225 3623 4.683832 ACTCACTCCGTTCATAATGTAGC 58.316 43.478 0.00 0.00 0.00 3.58
2230 3628 4.234574 CTCCGTTCATAATGTAGCGCATA 58.765 43.478 11.47 0.00 36.67 3.14
2266 3667 5.248870 AGTCAAACCTCACAAACATTGAC 57.751 39.130 8.06 8.06 44.19 3.18
2373 3780 6.724694 TGGTGTTGTACATATAAACGGTTC 57.275 37.500 0.00 0.00 0.00 3.62
2379 3786 8.959548 TGTTGTACATATAAACGGTTCTCTCTA 58.040 33.333 0.00 0.00 0.00 2.43
2441 3856 9.803315 ATGCACACTATATATACGAAACATAGG 57.197 33.333 0.00 0.00 0.00 2.57
2461 3876 9.094578 ACATAGGAGTATTAGTATGATGCACTT 57.905 33.333 0.00 0.00 0.00 3.16
2485 3900 5.616488 TTTGGAGTTTAGCGTGTTTATCC 57.384 39.130 0.00 0.00 0.00 2.59
2495 3910 0.027586 GTGTTTATCCGGCGCATGTC 59.972 55.000 10.83 0.00 0.00 3.06
2506 3921 0.668706 GCGCATGTCTCATCGGCTAT 60.669 55.000 0.30 0.00 0.00 2.97
2508 3923 1.458445 CGCATGTCTCATCGGCTATTG 59.542 52.381 0.00 0.00 0.00 1.90
2513 3928 0.673985 TCTCATCGGCTATTGGGACG 59.326 55.000 0.00 0.00 39.37 4.79
2528 3943 2.699251 GGACGGATCCAAACAACAAC 57.301 50.000 13.41 0.00 45.47 3.32
2529 3944 2.227194 GGACGGATCCAAACAACAACT 58.773 47.619 13.41 0.00 45.47 3.16
2531 3946 3.550030 GGACGGATCCAAACAACAACTTG 60.550 47.826 13.41 0.00 45.47 3.16
2532 3947 2.223711 ACGGATCCAAACAACAACTTGC 60.224 45.455 13.41 0.00 0.00 4.01
2533 3948 2.393764 GGATCCAAACAACAACTTGCG 58.606 47.619 6.95 0.00 0.00 4.85
2534 3949 2.223711 GGATCCAAACAACAACTTGCGT 60.224 45.455 6.95 0.00 0.00 5.24
2535 3950 3.003897 GGATCCAAACAACAACTTGCGTA 59.996 43.478 6.95 0.00 0.00 4.42
2536 3951 4.320935 GGATCCAAACAACAACTTGCGTAT 60.321 41.667 6.95 0.00 0.00 3.06
2537 3952 5.106475 GGATCCAAACAACAACTTGCGTATA 60.106 40.000 6.95 0.00 0.00 1.47
2538 3953 5.351233 TCCAAACAACAACTTGCGTATAG 57.649 39.130 0.00 0.00 0.00 1.31
2539 3954 4.817464 TCCAAACAACAACTTGCGTATAGT 59.183 37.500 0.00 0.00 0.00 2.12
2540 3955 5.990386 TCCAAACAACAACTTGCGTATAGTA 59.010 36.000 0.00 0.00 0.00 1.82
2541 3956 6.482641 TCCAAACAACAACTTGCGTATAGTAA 59.517 34.615 0.00 0.00 0.00 2.24
2542 3957 6.575942 CCAAACAACAACTTGCGTATAGTAAC 59.424 38.462 0.00 0.00 0.00 2.50
2543 3958 6.847956 AACAACAACTTGCGTATAGTAACA 57.152 33.333 0.00 0.00 0.00 2.41
2544 3959 6.219302 ACAACAACTTGCGTATAGTAACAC 57.781 37.500 0.00 0.00 0.00 3.32
2545 3960 5.987347 ACAACAACTTGCGTATAGTAACACT 59.013 36.000 0.00 0.00 0.00 3.55
2546 3961 6.145048 ACAACAACTTGCGTATAGTAACACTC 59.855 38.462 0.00 0.00 0.00 3.51
2547 3962 4.855388 ACAACTTGCGTATAGTAACACTCG 59.145 41.667 0.00 0.00 0.00 4.18
2548 3963 4.691860 ACTTGCGTATAGTAACACTCGT 57.308 40.909 0.00 0.00 0.00 4.18
2549 3964 5.051891 ACTTGCGTATAGTAACACTCGTT 57.948 39.130 0.00 0.00 39.24 3.85
2550 3965 5.464168 ACTTGCGTATAGTAACACTCGTTT 58.536 37.500 0.00 0.00 36.52 3.60
2551 3966 6.611381 ACTTGCGTATAGTAACACTCGTTTA 58.389 36.000 0.00 0.00 36.52 2.01
2552 3967 7.253422 ACTTGCGTATAGTAACACTCGTTTAT 58.747 34.615 0.00 0.00 36.52 1.40
2553 3968 7.756722 ACTTGCGTATAGTAACACTCGTTTATT 59.243 33.333 0.00 0.00 36.52 1.40
2554 3969 8.464770 TTGCGTATAGTAACACTCGTTTATTT 57.535 30.769 0.00 0.00 36.52 1.40
2555 3970 9.566530 TTGCGTATAGTAACACTCGTTTATTTA 57.433 29.630 0.00 0.00 36.52 1.40
2556 3971 9.734620 TGCGTATAGTAACACTCGTTTATTTAT 57.265 29.630 0.00 0.00 36.52 1.40
2563 3978 9.095065 AGTAACACTCGTTTATTTATTAGGCTG 57.905 33.333 0.00 0.00 36.52 4.85
2564 3979 7.916914 AACACTCGTTTATTTATTAGGCTGT 57.083 32.000 0.00 0.00 28.09 4.40
2565 3980 7.303634 ACACTCGTTTATTTATTAGGCTGTG 57.696 36.000 0.00 0.00 0.00 3.66
2566 3981 6.877322 ACACTCGTTTATTTATTAGGCTGTGT 59.123 34.615 0.00 0.00 0.00 3.72
2567 3982 8.036575 ACACTCGTTTATTTATTAGGCTGTGTA 58.963 33.333 0.00 0.00 31.87 2.90
2568 3983 9.042008 CACTCGTTTATTTATTAGGCTGTGTAT 57.958 33.333 0.00 0.00 0.00 2.29
2569 3984 9.257651 ACTCGTTTATTTATTAGGCTGTGTATC 57.742 33.333 0.00 0.00 0.00 2.24
2570 3985 9.256477 CTCGTTTATTTATTAGGCTGTGTATCA 57.744 33.333 0.00 0.00 0.00 2.15
2571 3986 9.037737 TCGTTTATTTATTAGGCTGTGTATCAC 57.962 33.333 0.00 0.00 34.56 3.06
2572 3987 9.042008 CGTTTATTTATTAGGCTGTGTATCACT 57.958 33.333 0.00 0.00 35.11 3.41
2574 3989 8.812147 TTATTTATTAGGCTGTGTATCACTCG 57.188 34.615 0.00 0.00 35.11 4.18
2575 3990 5.847111 TTATTAGGCTGTGTATCACTCGT 57.153 39.130 0.00 0.00 35.11 4.18
2576 3991 6.947644 TTATTAGGCTGTGTATCACTCGTA 57.052 37.500 0.00 0.00 35.11 3.43
2577 3992 7.520451 TTATTAGGCTGTGTATCACTCGTAT 57.480 36.000 0.00 0.00 35.11 3.06
2578 3993 8.625786 TTATTAGGCTGTGTATCACTCGTATA 57.374 34.615 0.00 0.00 35.11 1.47
2579 3994 6.555812 TTAGGCTGTGTATCACTCGTATAG 57.444 41.667 0.00 0.00 35.11 1.31
2580 3995 4.462133 AGGCTGTGTATCACTCGTATAGT 58.538 43.478 0.00 0.00 39.81 2.12
2581 3996 5.618236 AGGCTGTGTATCACTCGTATAGTA 58.382 41.667 0.00 0.00 35.76 1.82
2582 3997 6.060136 AGGCTGTGTATCACTCGTATAGTAA 58.940 40.000 0.00 0.00 35.76 2.24
2583 3998 6.017275 AGGCTGTGTATCACTCGTATAGTAAC 60.017 42.308 0.00 0.00 35.76 2.50
2584 3999 6.141462 GCTGTGTATCACTCGTATAGTAACC 58.859 44.000 1.72 0.00 35.76 2.85
2585 4000 6.291067 TGTGTATCACTCGTATAGTAACCG 57.709 41.667 1.72 0.00 35.76 4.44
2586 4001 5.817296 TGTGTATCACTCGTATAGTAACCGT 59.183 40.000 1.72 0.00 35.76 4.83
2587 4002 6.316140 TGTGTATCACTCGTATAGTAACCGTT 59.684 38.462 1.72 0.00 35.76 4.44
2588 4003 7.494298 TGTGTATCACTCGTATAGTAACCGTTA 59.506 37.037 1.72 0.00 35.76 3.18
2589 4004 8.335356 GTGTATCACTCGTATAGTAACCGTTAA 58.665 37.037 0.00 0.00 35.76 2.01
2590 4005 8.551205 TGTATCACTCGTATAGTAACCGTTAAG 58.449 37.037 0.00 0.00 35.76 1.85
2591 4006 6.363577 TCACTCGTATAGTAACCGTTAAGG 57.636 41.667 0.00 0.00 40.88 2.69
2592 4007 4.972440 CACTCGTATAGTAACCGTTAAGGC 59.028 45.833 0.00 0.00 39.28 4.35
2593 4008 4.884164 ACTCGTATAGTAACCGTTAAGGCT 59.116 41.667 0.00 0.00 39.46 4.58
2594 4009 5.008118 ACTCGTATAGTAACCGTTAAGGCTC 59.992 44.000 0.00 0.00 39.46 4.70
2595 4010 4.275936 TCGTATAGTAACCGTTAAGGCTCC 59.724 45.833 0.00 0.00 46.52 4.70
2596 4011 3.722728 ATAGTAACCGTTAAGGCTCCG 57.277 47.619 0.00 0.00 46.52 4.63
2597 4012 0.533951 AGTAACCGTTAAGGCTCCGG 59.466 55.000 15.90 15.90 46.52 5.14
2600 4015 2.202703 CCGTTAAGGCTCCGGTCG 60.203 66.667 0.00 0.00 37.00 4.79
2601 4016 2.884207 CGTTAAGGCTCCGGTCGC 60.884 66.667 0.00 5.55 0.00 5.19
2617 4032 2.202703 GCCCACGTGCGTAGGTAG 60.203 66.667 10.91 0.00 0.00 3.18
2618 4033 2.703798 GCCCACGTGCGTAGGTAGA 61.704 63.158 10.91 0.00 0.00 2.59
2619 4034 2.012902 GCCCACGTGCGTAGGTAGAT 62.013 60.000 10.91 0.00 0.00 1.98
2620 4035 0.248907 CCCACGTGCGTAGGTAGATG 60.249 60.000 10.91 0.00 0.00 2.90
2621 4036 0.248907 CCACGTGCGTAGGTAGATGG 60.249 60.000 10.91 0.00 0.00 3.51
2622 4037 0.248907 CACGTGCGTAGGTAGATGGG 60.249 60.000 0.82 0.00 0.00 4.00
2623 4038 1.299926 CGTGCGTAGGTAGATGGGC 60.300 63.158 0.00 0.00 0.00 5.36
2624 4039 1.735376 CGTGCGTAGGTAGATGGGCT 61.735 60.000 0.00 0.00 0.00 5.19
2625 4040 1.325355 GTGCGTAGGTAGATGGGCTA 58.675 55.000 0.00 0.00 0.00 3.93
2626 4041 1.269998 GTGCGTAGGTAGATGGGCTAG 59.730 57.143 0.00 0.00 0.00 3.42
2627 4042 0.244178 GCGTAGGTAGATGGGCTAGC 59.756 60.000 6.04 6.04 45.71 3.42
2628 4043 0.889306 CGTAGGTAGATGGGCTAGCC 59.111 60.000 26.55 26.55 46.36 3.93
2644 4059 4.691216 GGCTAGCCCATTAGAGATTAAACG 59.309 45.833 24.19 0.00 0.00 3.60
2645 4060 5.510861 GGCTAGCCCATTAGAGATTAAACGA 60.511 44.000 24.19 0.00 0.00 3.85
2646 4061 5.989777 GCTAGCCCATTAGAGATTAAACGAA 59.010 40.000 2.29 0.00 0.00 3.85
2647 4062 6.073711 GCTAGCCCATTAGAGATTAAACGAAC 60.074 42.308 2.29 0.00 0.00 3.95
2648 4063 5.741011 AGCCCATTAGAGATTAAACGAACA 58.259 37.500 0.00 0.00 0.00 3.18
2649 4064 5.817816 AGCCCATTAGAGATTAAACGAACAG 59.182 40.000 0.00 0.00 0.00 3.16
2650 4065 5.815740 GCCCATTAGAGATTAAACGAACAGA 59.184 40.000 0.00 0.00 0.00 3.41
2651 4066 6.483640 GCCCATTAGAGATTAAACGAACAGAT 59.516 38.462 0.00 0.00 0.00 2.90
2652 4067 7.656137 GCCCATTAGAGATTAAACGAACAGATA 59.344 37.037 0.00 0.00 0.00 1.98
2653 4068 9.542462 CCCATTAGAGATTAAACGAACAGATAA 57.458 33.333 0.00 0.00 0.00 1.75
2677 4092 8.856490 AATATCACTGTTTTTGTTTCTGTGTC 57.144 30.769 0.00 0.00 34.38 3.67
2678 4093 5.957842 TCACTGTTTTTGTTTCTGTGTCT 57.042 34.783 0.00 0.00 34.38 3.41
2679 4094 5.938322 TCACTGTTTTTGTTTCTGTGTCTC 58.062 37.500 0.00 0.00 34.38 3.36
2680 4095 5.471797 TCACTGTTTTTGTTTCTGTGTCTCA 59.528 36.000 0.00 0.00 34.38 3.27
2681 4096 6.016693 TCACTGTTTTTGTTTCTGTGTCTCAA 60.017 34.615 0.00 0.00 34.38 3.02
2682 4097 6.640499 CACTGTTTTTGTTTCTGTGTCTCAAA 59.360 34.615 0.00 0.00 0.00 2.69
2683 4098 6.640907 ACTGTTTTTGTTTCTGTGTCTCAAAC 59.359 34.615 0.00 0.00 0.00 2.93
2684 4099 6.507900 TGTTTTTGTTTCTGTGTCTCAAACA 58.492 32.000 0.00 0.00 34.78 2.83
2685 4100 6.980978 TGTTTTTGTTTCTGTGTCTCAAACAA 59.019 30.769 5.34 5.34 40.31 2.83
2686 4101 7.492669 TGTTTTTGTTTCTGTGTCTCAAACAAA 59.507 29.630 14.74 14.74 40.31 2.83
2687 4102 8.331742 GTTTTTGTTTCTGTGTCTCAAACAAAA 58.668 29.630 21.83 21.83 40.31 2.44
2688 4103 7.636259 TTTGTTTCTGTGTCTCAAACAAAAG 57.364 32.000 15.86 0.00 40.31 2.27
2689 4104 5.708948 TGTTTCTGTGTCTCAAACAAAAGG 58.291 37.500 0.00 0.00 40.31 3.11
2690 4105 5.475220 TGTTTCTGTGTCTCAAACAAAAGGA 59.525 36.000 0.00 0.00 40.31 3.36
2691 4106 6.015856 TGTTTCTGTGTCTCAAACAAAAGGAA 60.016 34.615 0.00 0.00 40.31 3.36
2692 4107 5.560966 TCTGTGTCTCAAACAAAAGGAAC 57.439 39.130 0.00 0.00 40.31 3.62
2693 4108 4.398044 TCTGTGTCTCAAACAAAAGGAACC 59.602 41.667 0.00 0.00 40.31 3.62
2694 4109 4.082845 TGTGTCTCAAACAAAAGGAACCA 58.917 39.130 0.00 0.00 40.31 3.67
2695 4110 4.709397 TGTGTCTCAAACAAAAGGAACCAT 59.291 37.500 0.00 0.00 40.31 3.55
2696 4111 5.186797 TGTGTCTCAAACAAAAGGAACCATT 59.813 36.000 0.00 0.00 40.31 3.16
2697 4112 6.106003 GTGTCTCAAACAAAAGGAACCATTT 58.894 36.000 0.00 0.00 40.31 2.32
2698 4113 6.593770 GTGTCTCAAACAAAAGGAACCATTTT 59.406 34.615 0.00 0.00 40.31 1.82
2699 4114 7.119116 GTGTCTCAAACAAAAGGAACCATTTTT 59.881 33.333 0.00 0.00 40.31 1.94
2720 4135 5.818678 TTTCTCAGTGTACAAGGTATGGT 57.181 39.130 0.00 0.00 0.00 3.55
2721 4136 6.921486 TTTCTCAGTGTACAAGGTATGGTA 57.079 37.500 0.00 0.00 0.00 3.25
2722 4137 7.490657 TTTCTCAGTGTACAAGGTATGGTAT 57.509 36.000 0.00 0.00 0.00 2.73
2723 4138 6.465439 TCTCAGTGTACAAGGTATGGTATG 57.535 41.667 0.00 0.00 0.00 2.39
2724 4139 5.018539 TCAGTGTACAAGGTATGGTATGC 57.981 43.478 0.00 0.00 0.00 3.14
2725 4140 4.714802 TCAGTGTACAAGGTATGGTATGCT 59.285 41.667 0.00 0.00 0.00 3.79
2726 4141 5.050490 CAGTGTACAAGGTATGGTATGCTC 58.950 45.833 0.00 0.00 0.00 4.26
2727 4142 4.962995 AGTGTACAAGGTATGGTATGCTCT 59.037 41.667 0.00 0.00 0.00 4.09
2728 4143 5.069251 AGTGTACAAGGTATGGTATGCTCTC 59.931 44.000 0.00 0.00 0.00 3.20
2729 4144 4.959839 TGTACAAGGTATGGTATGCTCTCA 59.040 41.667 0.00 0.00 0.00 3.27
2730 4145 5.423931 TGTACAAGGTATGGTATGCTCTCAA 59.576 40.000 0.00 0.00 0.00 3.02
2731 4146 5.028549 ACAAGGTATGGTATGCTCTCAAG 57.971 43.478 0.00 0.00 0.00 3.02
2732 4147 4.471386 ACAAGGTATGGTATGCTCTCAAGT 59.529 41.667 0.00 0.00 0.00 3.16
2733 4148 4.946478 AGGTATGGTATGCTCTCAAGTC 57.054 45.455 0.00 0.00 0.00 3.01
2734 4149 3.643792 AGGTATGGTATGCTCTCAAGTCC 59.356 47.826 0.00 0.00 0.00 3.85
2735 4150 3.643792 GGTATGGTATGCTCTCAAGTCCT 59.356 47.826 0.00 0.00 0.00 3.85
2736 4151 3.834489 ATGGTATGCTCTCAAGTCCTG 57.166 47.619 0.00 0.00 0.00 3.86
2737 4152 2.820178 TGGTATGCTCTCAAGTCCTGA 58.180 47.619 0.00 0.00 0.00 3.86
2738 4153 3.173151 TGGTATGCTCTCAAGTCCTGAA 58.827 45.455 0.00 0.00 32.17 3.02
2739 4154 3.776969 TGGTATGCTCTCAAGTCCTGAAT 59.223 43.478 0.00 0.00 32.17 2.57
2740 4155 4.141846 TGGTATGCTCTCAAGTCCTGAATC 60.142 45.833 0.00 0.00 32.17 2.52
2741 4156 2.662006 TGCTCTCAAGTCCTGAATCG 57.338 50.000 0.00 0.00 32.17 3.34
2742 4157 2.171003 TGCTCTCAAGTCCTGAATCGA 58.829 47.619 0.00 0.00 32.17 3.59
2743 4158 2.562738 TGCTCTCAAGTCCTGAATCGAA 59.437 45.455 0.00 0.00 32.17 3.71
2744 4159 3.006859 TGCTCTCAAGTCCTGAATCGAAA 59.993 43.478 0.00 0.00 32.17 3.46
2745 4160 3.997021 GCTCTCAAGTCCTGAATCGAAAA 59.003 43.478 0.00 0.00 32.17 2.29
2746 4161 4.092675 GCTCTCAAGTCCTGAATCGAAAAG 59.907 45.833 0.00 0.00 32.17 2.27
2747 4162 4.569943 TCTCAAGTCCTGAATCGAAAAGG 58.430 43.478 5.30 5.30 32.17 3.11
2748 4163 4.283467 TCTCAAGTCCTGAATCGAAAAGGA 59.717 41.667 9.39 9.39 37.78 3.36
2754 4169 4.261801 TCCTGAATCGAAAAGGACATTCC 58.738 43.478 9.39 0.00 35.14 3.01
2755 4170 3.063997 CCTGAATCGAAAAGGACATTCCG 59.936 47.826 5.67 0.00 42.75 4.30
2756 4171 3.006940 TGAATCGAAAAGGACATTCCGG 58.993 45.455 0.00 0.00 42.75 5.14
2757 4172 3.267483 GAATCGAAAAGGACATTCCGGA 58.733 45.455 0.00 0.00 42.75 5.14
2758 4173 3.560636 ATCGAAAAGGACATTCCGGAT 57.439 42.857 4.15 0.00 42.75 4.18
2759 4174 3.343941 TCGAAAAGGACATTCCGGATT 57.656 42.857 4.15 0.00 42.75 3.01
2760 4175 3.681593 TCGAAAAGGACATTCCGGATTT 58.318 40.909 4.15 0.00 42.75 2.17
2761 4176 3.687698 TCGAAAAGGACATTCCGGATTTC 59.312 43.478 4.15 9.68 42.75 2.17
2762 4177 3.438781 CGAAAAGGACATTCCGGATTTCA 59.561 43.478 19.25 0.98 42.75 2.69
2763 4178 4.096382 CGAAAAGGACATTCCGGATTTCAT 59.904 41.667 19.25 6.95 42.75 2.57
2764 4179 5.295787 CGAAAAGGACATTCCGGATTTCATA 59.704 40.000 19.25 0.00 42.75 2.15
2765 4180 6.017109 CGAAAAGGACATTCCGGATTTCATAT 60.017 38.462 19.25 2.27 42.75 1.78
2766 4181 7.172532 CGAAAAGGACATTCCGGATTTCATATA 59.827 37.037 19.25 0.00 42.75 0.86
2767 4182 8.760980 AAAAGGACATTCCGGATTTCATATAA 57.239 30.769 4.15 0.00 42.75 0.98
2768 4183 8.940397 AAAGGACATTCCGGATTTCATATAAT 57.060 30.769 4.15 0.00 42.75 1.28
2769 4184 7.928307 AGGACATTCCGGATTTCATATAATG 57.072 36.000 4.15 5.09 42.75 1.90
2770 4185 7.461749 AGGACATTCCGGATTTCATATAATGT 58.538 34.615 4.15 8.82 42.75 2.71
2771 4186 7.944554 AGGACATTCCGGATTTCATATAATGTT 59.055 33.333 4.15 0.00 42.75 2.71
2772 4187 9.226606 GGACATTCCGGATTTCATATAATGTTA 57.773 33.333 4.15 0.00 36.50 2.41
2802 4217 9.943163 AACGAAATTTTAAAAATTGTTCATGGG 57.057 25.926 5.98 0.00 0.00 4.00
2803 4218 9.114952 ACGAAATTTTAAAAATTGTTCATGGGT 57.885 25.926 5.98 0.07 0.00 4.51
2804 4219 9.943163 CGAAATTTTAAAAATTGTTCATGGGTT 57.057 25.926 5.98 0.00 0.00 4.11
2816 4231 7.793927 TTGTTCATGGGTTTAAAAATGTTCC 57.206 32.000 0.00 0.00 0.00 3.62
2817 4232 6.889198 TGTTCATGGGTTTAAAAATGTTCCA 58.111 32.000 0.00 0.00 0.00 3.53
2818 4233 7.338710 TGTTCATGGGTTTAAAAATGTTCCAA 58.661 30.769 0.00 0.00 0.00 3.53
2819 4234 7.829211 TGTTCATGGGTTTAAAAATGTTCCAAA 59.171 29.630 0.00 0.00 0.00 3.28
2820 4235 8.341903 GTTCATGGGTTTAAAAATGTTCCAAAG 58.658 33.333 0.00 0.00 0.00 2.77
2821 4236 7.569240 TCATGGGTTTAAAAATGTTCCAAAGT 58.431 30.769 0.00 0.00 0.00 2.66
2822 4237 8.049721 TCATGGGTTTAAAAATGTTCCAAAGTT 58.950 29.630 0.00 0.00 0.00 2.66
2823 4238 8.681806 CATGGGTTTAAAAATGTTCCAAAGTTT 58.318 29.630 0.00 0.00 0.00 2.66
2824 4239 8.270080 TGGGTTTAAAAATGTTCCAAAGTTTC 57.730 30.769 0.00 0.00 0.00 2.78
2825 4240 7.883311 TGGGTTTAAAAATGTTCCAAAGTTTCA 59.117 29.630 0.00 0.00 0.00 2.69
2826 4241 8.731605 GGGTTTAAAAATGTTCCAAAGTTTCAA 58.268 29.630 0.00 0.00 0.00 2.69
2832 4247 9.623350 AAAAATGTTCCAAAGTTTCAAAACATG 57.377 25.926 15.32 6.46 41.30 3.21
2833 4248 7.920160 AATGTTCCAAAGTTTCAAAACATGT 57.080 28.000 15.32 0.00 41.30 3.21
2834 4249 7.920160 ATGTTCCAAAGTTTCAAAACATGTT 57.080 28.000 4.92 4.92 41.30 2.71
2835 4250 9.442047 AATGTTCCAAAGTTTCAAAACATGTTA 57.558 25.926 12.39 0.00 41.30 2.41
2836 4251 8.245701 TGTTCCAAAGTTTCAAAACATGTTAC 57.754 30.769 12.39 5.91 41.30 2.50
2837 4252 7.872993 TGTTCCAAAGTTTCAAAACATGTTACA 59.127 29.630 12.39 4.30 41.30 2.41
2838 4253 8.713271 GTTCCAAAGTTTCAAAACATGTTACAA 58.287 29.630 12.39 2.15 41.30 2.41
2839 4254 8.245701 TCCAAAGTTTCAAAACATGTTACAAC 57.754 30.769 12.39 11.77 41.30 3.32
2840 4255 7.872993 TCCAAAGTTTCAAAACATGTTACAACA 59.127 29.630 12.39 0.00 41.30 3.33
2841 4256 8.499162 CCAAAGTTTCAAAACATGTTACAACAA 58.501 29.630 12.39 0.00 41.30 2.83
2842 4257 9.869844 CAAAGTTTCAAAACATGTTACAACAAA 57.130 25.926 12.39 4.52 41.30 2.83
2843 4258 9.871299 AAAGTTTCAAAACATGTTACAACAAAC 57.129 25.926 12.39 15.01 41.30 2.93
2844 4259 8.594881 AGTTTCAAAACATGTTACAACAAACA 57.405 26.923 12.39 0.00 41.30 2.83
2845 4260 9.046296 AGTTTCAAAACATGTTACAACAAACAA 57.954 25.926 12.39 0.00 41.30 2.83
2846 4261 9.097672 GTTTCAAAACATGTTACAACAAACAAC 57.902 29.630 12.39 2.66 42.33 3.32
2847 4262 7.946655 TCAAAACATGTTACAACAAACAACA 57.053 28.000 12.39 0.00 42.33 3.33
2848 4263 8.365399 TCAAAACATGTTACAACAAACAACAA 57.635 26.923 12.39 0.00 42.33 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.425392 GCCCAATCCCCTCAAATCTCAT 60.425 50.000 0.00 0.00 0.00 2.90
62 63 3.781079 TGCAAGCCTAAAATCGATTGG 57.219 42.857 12.25 9.96 0.00 3.16
82 83 5.067805 GGATTCCGGTTAAGAGCATGATTTT 59.932 40.000 0.00 0.00 0.00 1.82
83 84 4.580580 GGATTCCGGTTAAGAGCATGATTT 59.419 41.667 0.00 0.00 0.00 2.17
88 89 3.244249 GCTAGGATTCCGGTTAAGAGCAT 60.244 47.826 0.00 0.00 0.00 3.79
180 182 5.753921 GTCTGGTAGATGCCAAATACTGTAC 59.246 44.000 0.00 0.00 38.18 2.90
182 184 4.471386 AGTCTGGTAGATGCCAAATACTGT 59.529 41.667 0.00 0.00 38.18 3.55
233 466 3.660111 GCAGCTTTGGCCGTCGTT 61.660 61.111 0.00 0.00 39.73 3.85
255 488 4.098416 CGCTTTATTGCTTTACAGCCTTC 58.902 43.478 0.00 0.00 46.74 3.46
257 490 2.159379 GCGCTTTATTGCTTTACAGCCT 60.159 45.455 0.00 0.00 46.74 4.58
279 512 1.165270 CAAACAGGGCCTAAGTTCCG 58.835 55.000 5.28 0.00 0.00 4.30
286 519 2.757894 TTGAAACCAAACAGGGCCTA 57.242 45.000 5.28 0.00 43.89 3.93
287 520 1.872773 TTTGAAACCAAACAGGGCCT 58.127 45.000 0.00 0.00 43.89 5.19
288 521 2.928801 ATTTGAAACCAAACAGGGCC 57.071 45.000 0.00 0.00 43.89 5.80
289 522 5.994668 TGATTTATTTGAAACCAAACAGGGC 59.005 36.000 0.00 0.00 43.89 5.19
290 523 6.426633 GGTGATTTATTTGAAACCAAACAGGG 59.573 38.462 0.00 0.00 43.89 4.45
291 524 6.989169 TGGTGATTTATTTGAAACCAAACAGG 59.011 34.615 0.00 0.00 45.67 4.00
292 525 8.334632 GTTGGTGATTTATTTGAAACCAAACAG 58.665 33.333 6.65 0.00 46.21 3.16
293 526 8.043710 AGTTGGTGATTTATTTGAAACCAAACA 58.956 29.630 6.65 0.00 46.21 2.83
294 527 8.432110 AGTTGGTGATTTATTTGAAACCAAAC 57.568 30.769 6.65 2.75 46.21 2.93
308 541 9.063615 ACTTTTCGACTTATAAGTTGGTGATTT 57.936 29.630 25.99 9.41 39.88 2.17
309 542 8.617290 ACTTTTCGACTTATAAGTTGGTGATT 57.383 30.769 25.99 10.65 39.88 2.57
310 543 9.715121 TTACTTTTCGACTTATAAGTTGGTGAT 57.285 29.630 25.99 14.23 39.88 3.06
311 544 9.545105 TTTACTTTTCGACTTATAAGTTGGTGA 57.455 29.630 25.99 16.00 39.88 4.02
338 571 7.821846 TCTGTTTGGCAAAATAAGTCACTTTTT 59.178 29.630 15.29 0.00 0.00 1.94
339 572 7.277760 GTCTGTTTGGCAAAATAAGTCACTTTT 59.722 33.333 15.29 0.00 0.00 2.27
340 573 6.756542 GTCTGTTTGGCAAAATAAGTCACTTT 59.243 34.615 15.29 0.00 0.00 2.66
341 574 6.273071 GTCTGTTTGGCAAAATAAGTCACTT 58.727 36.000 15.29 0.00 0.00 3.16
342 575 5.221244 GGTCTGTTTGGCAAAATAAGTCACT 60.221 40.000 15.29 0.00 0.00 3.41
343 576 4.982295 GGTCTGTTTGGCAAAATAAGTCAC 59.018 41.667 15.29 7.77 0.00 3.67
344 577 4.038642 GGGTCTGTTTGGCAAAATAAGTCA 59.961 41.667 15.29 6.39 0.00 3.41
345 578 4.556233 GGGTCTGTTTGGCAAAATAAGTC 58.444 43.478 15.29 10.05 0.00 3.01
346 579 3.005367 CGGGTCTGTTTGGCAAAATAAGT 59.995 43.478 15.29 0.00 0.00 2.24
347 580 3.254657 TCGGGTCTGTTTGGCAAAATAAG 59.745 43.478 15.29 12.47 0.00 1.73
348 581 3.004944 GTCGGGTCTGTTTGGCAAAATAA 59.995 43.478 15.29 2.73 0.00 1.40
349 582 2.554893 GTCGGGTCTGTTTGGCAAAATA 59.445 45.455 15.29 6.13 0.00 1.40
350 583 1.339929 GTCGGGTCTGTTTGGCAAAAT 59.660 47.619 15.29 0.00 0.00 1.82
351 584 0.741915 GTCGGGTCTGTTTGGCAAAA 59.258 50.000 15.29 4.59 0.00 2.44
352 585 0.106918 AGTCGGGTCTGTTTGGCAAA 60.107 50.000 8.93 8.93 0.00 3.68
353 586 0.106918 AAGTCGGGTCTGTTTGGCAA 60.107 50.000 0.00 0.00 0.00 4.52
354 587 0.759959 TAAGTCGGGTCTGTTTGGCA 59.240 50.000 0.00 0.00 0.00 4.92
355 588 2.109425 ATAAGTCGGGTCTGTTTGGC 57.891 50.000 0.00 0.00 0.00 4.52
356 589 4.828829 ACTTATAAGTCGGGTCTGTTTGG 58.171 43.478 12.50 0.00 32.86 3.28
372 605 8.612486 TGACTTATAAGTTGGGGTGACTTATA 57.388 34.615 18.96 10.90 44.36 0.98
373 606 7.504926 TGACTTATAAGTTGGGGTGACTTAT 57.495 36.000 18.96 12.48 46.52 1.73
374 607 6.938698 TGACTTATAAGTTGGGGTGACTTA 57.061 37.500 18.96 0.00 42.07 2.24
375 608 5.836024 TGACTTATAAGTTGGGGTGACTT 57.164 39.130 18.96 0.00 39.88 3.01
376 609 7.504926 TTATGACTTATAAGTTGGGGTGACT 57.495 36.000 18.96 0.00 39.88 3.41
377 610 7.787725 CTTATGACTTATAAGTTGGGGTGAC 57.212 40.000 18.96 4.87 42.11 3.67
388 621 6.826741 GGGGTGAAGCAACTTATGACTTATAA 59.173 38.462 0.00 0.00 0.00 0.98
389 622 6.069905 TGGGGTGAAGCAACTTATGACTTATA 60.070 38.462 0.00 0.00 0.00 0.98
390 623 5.193679 GGGGTGAAGCAACTTATGACTTAT 58.806 41.667 0.00 0.00 0.00 1.73
391 624 4.042311 TGGGGTGAAGCAACTTATGACTTA 59.958 41.667 0.00 0.00 0.00 2.24
392 625 3.181434 TGGGGTGAAGCAACTTATGACTT 60.181 43.478 0.00 0.00 0.00 3.01
393 626 2.375174 TGGGGTGAAGCAACTTATGACT 59.625 45.455 0.00 0.00 0.00 3.41
394 627 2.790433 TGGGGTGAAGCAACTTATGAC 58.210 47.619 0.00 0.00 0.00 3.06
395 628 3.153919 GTTGGGGTGAAGCAACTTATGA 58.846 45.455 0.00 0.00 0.00 2.15
396 629 3.157087 AGTTGGGGTGAAGCAACTTATG 58.843 45.455 0.00 0.00 34.63 1.90
397 630 3.525800 AGTTGGGGTGAAGCAACTTAT 57.474 42.857 0.00 0.00 34.63 1.73
398 631 3.306472 AAGTTGGGGTGAAGCAACTTA 57.694 42.857 0.32 0.00 43.44 2.24
399 632 2.159179 AAGTTGGGGTGAAGCAACTT 57.841 45.000 0.00 0.00 41.36 2.66
400 633 3.306472 TTAAGTTGGGGTGAAGCAACT 57.694 42.857 0.00 0.00 39.27 3.16
401 634 4.116961 GTTTTAAGTTGGGGTGAAGCAAC 58.883 43.478 0.00 0.00 0.00 4.17
402 635 4.027437 AGTTTTAAGTTGGGGTGAAGCAA 58.973 39.130 0.00 0.00 0.00 3.91
403 636 3.637769 AGTTTTAAGTTGGGGTGAAGCA 58.362 40.909 0.00 0.00 0.00 3.91
404 637 4.665833 AAGTTTTAAGTTGGGGTGAAGC 57.334 40.909 0.00 0.00 0.00 3.86
407 640 9.589461 TGATTTATAAGTTTTAAGTTGGGGTGA 57.411 29.630 0.00 0.00 0.00 4.02
408 641 9.634163 GTGATTTATAAGTTTTAAGTTGGGGTG 57.366 33.333 0.00 0.00 0.00 4.61
409 642 8.809066 GGTGATTTATAAGTTTTAAGTTGGGGT 58.191 33.333 0.00 0.00 0.00 4.95
410 643 8.255206 GGGTGATTTATAAGTTTTAAGTTGGGG 58.745 37.037 0.00 0.00 0.00 4.96
411 644 8.255206 GGGGTGATTTATAAGTTTTAAGTTGGG 58.745 37.037 0.00 0.00 0.00 4.12
412 645 8.255206 GGGGGTGATTTATAAGTTTTAAGTTGG 58.745 37.037 0.00 0.00 0.00 3.77
413 646 9.031537 AGGGGGTGATTTATAAGTTTTAAGTTG 57.968 33.333 0.00 0.00 0.00 3.16
414 647 9.610104 AAGGGGGTGATTTATAAGTTTTAAGTT 57.390 29.630 0.00 0.00 0.00 2.66
415 648 9.610104 AAAGGGGGTGATTTATAAGTTTTAAGT 57.390 29.630 0.00 0.00 0.00 2.24
418 651 8.315482 GCAAAAGGGGGTGATTTATAAGTTTTA 58.685 33.333 0.00 0.00 0.00 1.52
419 652 7.165485 GCAAAAGGGGGTGATTTATAAGTTTT 58.835 34.615 0.00 0.00 0.00 2.43
420 653 6.271159 TGCAAAAGGGGGTGATTTATAAGTTT 59.729 34.615 0.00 0.00 0.00 2.66
421 654 5.782845 TGCAAAAGGGGGTGATTTATAAGTT 59.217 36.000 0.00 0.00 0.00 2.66
422 655 5.337788 TGCAAAAGGGGGTGATTTATAAGT 58.662 37.500 0.00 0.00 0.00 2.24
423 656 5.930837 TGCAAAAGGGGGTGATTTATAAG 57.069 39.130 0.00 0.00 0.00 1.73
424 657 5.130145 CCATGCAAAAGGGGGTGATTTATAA 59.870 40.000 0.00 0.00 0.00 0.98
425 658 4.653341 CCATGCAAAAGGGGGTGATTTATA 59.347 41.667 0.00 0.00 0.00 0.98
426 659 3.455543 CCATGCAAAAGGGGGTGATTTAT 59.544 43.478 0.00 0.00 0.00 1.40
427 660 2.836981 CCATGCAAAAGGGGGTGATTTA 59.163 45.455 0.00 0.00 0.00 1.40
428 661 1.629861 CCATGCAAAAGGGGGTGATTT 59.370 47.619 0.00 0.00 0.00 2.17
429 662 1.278537 CCATGCAAAAGGGGGTGATT 58.721 50.000 0.00 0.00 0.00 2.57
430 663 0.618393 CCCATGCAAAAGGGGGTGAT 60.618 55.000 13.05 0.00 46.96 3.06
431 664 1.229145 CCCATGCAAAAGGGGGTGA 60.229 57.895 13.05 0.00 46.96 4.02
432 665 3.391098 CCCATGCAAAAGGGGGTG 58.609 61.111 13.05 0.00 46.96 4.61
437 670 1.543944 GGTGGGACCCATGCAAAAGG 61.544 60.000 18.51 0.00 35.28 3.11
438 671 0.831288 TGGTGGGACCCATGCAAAAG 60.831 55.000 18.51 0.00 37.50 2.27
439 672 1.118356 GTGGTGGGACCCATGCAAAA 61.118 55.000 18.51 0.00 37.50 2.44
440 673 1.532794 GTGGTGGGACCCATGCAAA 60.533 57.895 18.51 0.00 37.50 3.68
441 674 2.117206 GTGGTGGGACCCATGCAA 59.883 61.111 18.51 0.00 37.50 4.08
442 675 3.978193 GGTGGTGGGACCCATGCA 61.978 66.667 18.51 0.00 37.50 3.96
443 676 3.661648 AGGTGGTGGGACCCATGC 61.662 66.667 18.51 9.82 37.50 4.06
444 677 2.356278 CAGGTGGTGGGACCCATG 59.644 66.667 18.51 6.58 37.50 3.66
445 678 3.661648 GCAGGTGGTGGGACCCAT 61.662 66.667 18.51 0.00 37.50 4.00
447 680 3.661648 ATGCAGGTGGTGGGACCC 61.662 66.667 2.45 2.45 37.50 4.46
448 681 2.215451 ATCATGCAGGTGGTGGGACC 62.215 60.000 0.00 0.00 39.22 4.46
449 682 1.033746 CATCATGCAGGTGGTGGGAC 61.034 60.000 0.00 0.00 0.00 4.46
450 683 1.303948 CATCATGCAGGTGGTGGGA 59.696 57.895 0.00 0.00 0.00 4.37
451 684 1.000521 ACATCATGCAGGTGGTGGG 60.001 57.895 5.59 0.00 34.50 4.61
452 685 1.317431 CCACATCATGCAGGTGGTGG 61.317 60.000 22.51 22.51 45.48 4.61
453 686 2.186155 CCACATCATGCAGGTGGTG 58.814 57.895 16.99 15.97 45.48 4.17
454 687 4.749323 CCACATCATGCAGGTGGT 57.251 55.556 16.99 6.65 45.48 4.16
456 689 1.407618 CCAATCCACATCATGCAGGTG 59.592 52.381 0.00 0.88 0.00 4.00
457 690 1.006281 ACCAATCCACATCATGCAGGT 59.994 47.619 0.00 0.00 0.00 4.00
458 691 1.407618 CACCAATCCACATCATGCAGG 59.592 52.381 0.00 0.00 0.00 4.85
459 692 2.097036 ACACCAATCCACATCATGCAG 58.903 47.619 0.00 0.00 0.00 4.41
460 693 1.819903 CACACCAATCCACATCATGCA 59.180 47.619 0.00 0.00 0.00 3.96
461 694 1.135527 CCACACCAATCCACATCATGC 59.864 52.381 0.00 0.00 0.00 4.06
462 695 2.725637 TCCACACCAATCCACATCATG 58.274 47.619 0.00 0.00 0.00 3.07
463 696 3.454719 TTCCACACCAATCCACATCAT 57.545 42.857 0.00 0.00 0.00 2.45
464 697 2.967745 TTCCACACCAATCCACATCA 57.032 45.000 0.00 0.00 0.00 3.07
465 698 2.493278 CCTTTCCACACCAATCCACATC 59.507 50.000 0.00 0.00 0.00 3.06
466 699 2.158325 ACCTTTCCACACCAATCCACAT 60.158 45.455 0.00 0.00 0.00 3.21
467 700 1.216678 ACCTTTCCACACCAATCCACA 59.783 47.619 0.00 0.00 0.00 4.17
468 701 1.613437 CACCTTTCCACACCAATCCAC 59.387 52.381 0.00 0.00 0.00 4.02
469 702 1.216678 ACACCTTTCCACACCAATCCA 59.783 47.619 0.00 0.00 0.00 3.41
470 703 1.613437 CACACCTTTCCACACCAATCC 59.387 52.381 0.00 0.00 0.00 3.01
471 704 2.293399 GACACACCTTTCCACACCAATC 59.707 50.000 0.00 0.00 0.00 2.67
472 705 2.306847 GACACACCTTTCCACACCAAT 58.693 47.619 0.00 0.00 0.00 3.16
473 706 1.004862 TGACACACCTTTCCACACCAA 59.995 47.619 0.00 0.00 0.00 3.67
474 707 0.621082 TGACACACCTTTCCACACCA 59.379 50.000 0.00 0.00 0.00 4.17
475 708 1.308998 CTGACACACCTTTCCACACC 58.691 55.000 0.00 0.00 0.00 4.16
476 709 1.308998 CCTGACACACCTTTCCACAC 58.691 55.000 0.00 0.00 0.00 3.82
477 710 0.916086 ACCTGACACACCTTTCCACA 59.084 50.000 0.00 0.00 0.00 4.17
478 711 1.134220 TCACCTGACACACCTTTCCAC 60.134 52.381 0.00 0.00 0.00 4.02
479 712 1.134220 GTCACCTGACACACCTTTCCA 60.134 52.381 0.31 0.00 44.18 3.53
480 713 1.594331 GTCACCTGACACACCTTTCC 58.406 55.000 0.31 0.00 44.18 3.13
497 730 5.790593 TGGTTGTCACCTGACTTATAAGTC 58.209 41.667 30.61 30.61 46.58 3.01
498 731 5.818678 TGGTTGTCACCTGACTTATAAGT 57.181 39.130 18.05 18.05 44.61 2.24
499 732 6.485313 TGTTTGGTTGTCACCTGACTTATAAG 59.515 38.462 11.05 11.05 44.61 1.73
500 733 6.358178 TGTTTGGTTGTCACCTGACTTATAA 58.642 36.000 6.97 0.00 44.61 0.98
501 734 5.931294 TGTTTGGTTGTCACCTGACTTATA 58.069 37.500 6.97 0.00 44.61 0.98
502 735 4.787551 TGTTTGGTTGTCACCTGACTTAT 58.212 39.130 6.97 0.00 44.61 1.73
503 736 4.196193 CTGTTTGGTTGTCACCTGACTTA 58.804 43.478 6.97 0.00 44.61 2.24
504 737 3.016736 CTGTTTGGTTGTCACCTGACTT 58.983 45.455 6.97 0.00 44.61 3.01
505 738 2.643551 CTGTTTGGTTGTCACCTGACT 58.356 47.619 6.97 0.00 44.61 3.41
506 739 1.676006 CCTGTTTGGTTGTCACCTGAC 59.324 52.381 0.00 0.00 44.61 3.51
507 740 2.021723 GCCTGTTTGGTTGTCACCTGA 61.022 52.381 0.00 0.00 44.61 3.86
508 741 0.385390 GCCTGTTTGGTTGTCACCTG 59.615 55.000 0.00 0.00 44.61 4.00
509 742 0.033601 TGCCTGTTTGGTTGTCACCT 60.034 50.000 0.00 0.00 44.61 4.00
510 743 1.039856 ATGCCTGTTTGGTTGTCACC 58.960 50.000 0.00 0.00 44.56 4.02
511 744 1.680735 TCATGCCTGTTTGGTTGTCAC 59.319 47.619 0.00 0.00 38.35 3.67
512 745 1.680735 GTCATGCCTGTTTGGTTGTCA 59.319 47.619 0.00 0.00 38.35 3.58
513 746 1.956477 AGTCATGCCTGTTTGGTTGTC 59.044 47.619 0.00 0.00 38.35 3.18
514 747 1.956477 GAGTCATGCCTGTTTGGTTGT 59.044 47.619 0.00 0.00 38.35 3.32
515 748 1.955778 TGAGTCATGCCTGTTTGGTTG 59.044 47.619 0.00 0.00 38.35 3.77
516 749 1.956477 GTGAGTCATGCCTGTTTGGTT 59.044 47.619 0.00 0.00 38.35 3.67
517 750 1.609208 GTGAGTCATGCCTGTTTGGT 58.391 50.000 0.00 0.00 38.35 3.67
518 751 0.883833 GGTGAGTCATGCCTGTTTGG 59.116 55.000 0.00 0.00 39.35 3.28
519 752 1.538512 CAGGTGAGTCATGCCTGTTTG 59.461 52.381 17.77 0.00 43.42 2.93
520 753 1.901591 CAGGTGAGTCATGCCTGTTT 58.098 50.000 17.77 0.00 43.42 2.83
521 754 3.639099 CAGGTGAGTCATGCCTGTT 57.361 52.632 17.77 0.00 43.42 3.16
524 757 4.785346 ATAAATCAGGTGAGTCATGCCT 57.215 40.909 0.00 0.00 0.00 4.75
525 758 6.058183 ACTTATAAATCAGGTGAGTCATGCC 58.942 40.000 0.00 0.00 0.00 4.40
526 759 6.763135 TGACTTATAAATCAGGTGAGTCATGC 59.237 38.462 0.00 0.00 37.64 4.06
527 760 8.362860 CTGACTTATAAATCAGGTGAGTCATG 57.637 38.462 14.74 0.00 40.58 3.07
548 781 4.015872 TGGTTCCAATAAGTCACCTGAC 57.984 45.455 0.00 0.00 45.08 3.51
549 782 4.715534 TTGGTTCCAATAAGTCACCTGA 57.284 40.909 0.00 0.00 0.00 3.86
550 783 4.582656 TGTTTGGTTCCAATAAGTCACCTG 59.417 41.667 5.06 0.00 0.00 4.00
551 784 4.798882 TGTTTGGTTCCAATAAGTCACCT 58.201 39.130 5.06 0.00 0.00 4.00
552 785 4.022329 CCTGTTTGGTTCCAATAAGTCACC 60.022 45.833 5.06 0.00 0.00 4.02
553 786 4.558697 GCCTGTTTGGTTCCAATAAGTCAC 60.559 45.833 5.06 0.71 38.35 3.67
554 787 3.572255 GCCTGTTTGGTTCCAATAAGTCA 59.428 43.478 5.06 1.06 38.35 3.41
555 788 3.056821 GGCCTGTTTGGTTCCAATAAGTC 60.057 47.826 5.06 0.00 38.35 3.01
556 789 2.897326 GGCCTGTTTGGTTCCAATAAGT 59.103 45.455 5.06 0.00 38.35 2.24
557 790 2.233676 GGGCCTGTTTGGTTCCAATAAG 59.766 50.000 0.84 6.17 38.35 1.73
558 791 2.158234 AGGGCCTGTTTGGTTCCAATAA 60.158 45.455 4.50 0.00 38.35 1.40
559 792 1.431243 AGGGCCTGTTTGGTTCCAATA 59.569 47.619 4.50 0.00 38.35 1.90
560 793 0.190815 AGGGCCTGTTTGGTTCCAAT 59.809 50.000 4.50 0.00 38.35 3.16
561 794 0.854218 TAGGGCCTGTTTGGTTCCAA 59.146 50.000 18.53 0.00 38.35 3.53
562 795 0.854218 TTAGGGCCTGTTTGGTTCCA 59.146 50.000 18.53 0.00 38.35 3.53
563 796 1.616865 GTTTAGGGCCTGTTTGGTTCC 59.383 52.381 18.53 0.00 38.35 3.62
564 797 2.594131 AGTTTAGGGCCTGTTTGGTTC 58.406 47.619 18.53 0.00 38.35 3.62
565 798 2.767644 AGTTTAGGGCCTGTTTGGTT 57.232 45.000 18.53 0.00 38.35 3.67
566 799 3.887916 TTAGTTTAGGGCCTGTTTGGT 57.112 42.857 18.53 0.00 38.35 3.67
567 800 4.022329 CAGTTTAGTTTAGGGCCTGTTTGG 60.022 45.833 18.53 0.00 39.35 3.28
568 801 4.825085 TCAGTTTAGTTTAGGGCCTGTTTG 59.175 41.667 18.53 1.87 0.00 2.93
569 802 5.056553 TCAGTTTAGTTTAGGGCCTGTTT 57.943 39.130 18.53 1.34 0.00 2.83
570 803 4.652822 CTCAGTTTAGTTTAGGGCCTGTT 58.347 43.478 18.53 0.95 0.00 3.16
571 804 3.559384 GCTCAGTTTAGTTTAGGGCCTGT 60.559 47.826 18.53 0.02 0.00 4.00
572 805 3.010420 GCTCAGTTTAGTTTAGGGCCTG 58.990 50.000 18.53 0.00 0.00 4.85
573 806 2.913617 AGCTCAGTTTAGTTTAGGGCCT 59.086 45.455 12.58 12.58 0.00 5.19
574 807 3.010420 CAGCTCAGTTTAGTTTAGGGCC 58.990 50.000 0.00 0.00 0.00 5.80
575 808 3.939066 TCAGCTCAGTTTAGTTTAGGGC 58.061 45.455 0.00 0.00 0.00 5.19
576 809 5.412904 CCTTTCAGCTCAGTTTAGTTTAGGG 59.587 44.000 0.00 0.00 0.00 3.53
577 810 5.412904 CCCTTTCAGCTCAGTTTAGTTTAGG 59.587 44.000 0.00 0.00 0.00 2.69
578 811 5.998363 ACCCTTTCAGCTCAGTTTAGTTTAG 59.002 40.000 0.00 0.00 0.00 1.85
579 812 5.937111 ACCCTTTCAGCTCAGTTTAGTTTA 58.063 37.500 0.00 0.00 0.00 2.01
592 825 1.953559 TATGCATCGACCCTTTCAGC 58.046 50.000 0.19 0.00 0.00 4.26
594 827 4.955811 ACTATATGCATCGACCCTTTCA 57.044 40.909 0.19 0.00 0.00 2.69
595 828 5.292101 GCATACTATATGCATCGACCCTTTC 59.708 44.000 14.47 0.00 44.00 2.62
677 912 1.335182 TGTCAGAGATTCGATCCGCTC 59.665 52.381 0.00 0.00 0.00 5.03
679 914 1.601663 CCTGTCAGAGATTCGATCCGC 60.602 57.143 0.00 0.00 0.00 5.54
741 976 4.925068 AGTTTGTGACAAACTTGATGCTC 58.075 39.130 31.61 9.22 37.18 4.26
934 1173 2.960384 GGGCTCTACCTCTTCTTCTACC 59.040 54.545 0.00 0.00 39.10 3.18
935 1174 3.633418 TGGGCTCTACCTCTTCTTCTAC 58.367 50.000 0.00 0.00 39.10 2.59
936 1175 3.904717 CTGGGCTCTACCTCTTCTTCTA 58.095 50.000 0.00 0.00 39.10 2.10
939 1178 1.199615 GCTGGGCTCTACCTCTTCTT 58.800 55.000 0.00 0.00 39.10 2.52
946 1188 0.762461 ATCAGAGGCTGGGCTCTACC 60.762 60.000 22.88 0.00 37.93 3.18
1145 1397 1.753930 TGCACCAGGATTATGCACTG 58.246 50.000 0.00 0.00 44.17 3.66
1248 1801 2.273557 CCCGGAACCTGTATAACAACG 58.726 52.381 0.73 0.00 0.00 4.10
1283 1838 3.243267 GGAAGTAGATCGGAGAGAAGTGC 60.243 52.174 0.00 0.00 43.63 4.40
1542 2101 5.475564 ACAAATAAGTCAGGGCAAACGTTAT 59.524 36.000 0.00 0.00 0.00 1.89
1551 2110 5.297569 AGAGGATACAAATAAGTCAGGGC 57.702 43.478 0.00 0.00 41.41 5.19
1552 2111 6.543831 CCAAAGAGGATACAAATAAGTCAGGG 59.456 42.308 0.00 0.00 41.22 4.45
1688 2254 7.327275 CAGTAGTCACAAACTCACTAGTTGATC 59.673 40.741 0.00 0.00 45.37 2.92
1694 2260 6.584184 CACATCAGTAGTCACAAACTCACTAG 59.416 42.308 0.00 0.00 39.55 2.57
1696 2262 5.292765 CACATCAGTAGTCACAAACTCACT 58.707 41.667 0.00 0.00 39.55 3.41
1737 2303 5.554822 TTCAGACCAACACAAACAGTTAC 57.445 39.130 0.00 0.00 0.00 2.50
1758 2324 7.056635 CCTCCATGGTTATCTACAAGACAATT 58.943 38.462 12.58 0.00 0.00 2.32
1993 2559 9.776451 CAATAAACACACGATACACAATTTTTG 57.224 29.630 0.00 0.00 0.00 2.44
1998 2564 6.148645 TCAGCAATAAACACACGATACACAAT 59.851 34.615 0.00 0.00 0.00 2.71
2038 2604 1.015868 CACACACTCACACATGCACA 58.984 50.000 0.00 0.00 0.00 4.57
2065 2631 1.458064 GCTAACGCACACAACGTACAT 59.542 47.619 0.00 0.00 44.30 2.29
2067 2633 0.179292 CGCTAACGCACACAACGTAC 60.179 55.000 0.00 0.00 44.30 3.67
2068 2634 0.594540 ACGCTAACGCACACAACGTA 60.595 50.000 0.00 0.00 44.30 3.57
2082 3480 2.162809 TCTGAACACGCATCTAACGCTA 59.837 45.455 0.00 0.00 0.00 4.26
2198 3596 6.100004 ACATTATGAACGGAGTGAGTAAGTG 58.900 40.000 0.00 0.00 45.00 3.16
2200 3598 6.418226 GCTACATTATGAACGGAGTGAGTAAG 59.582 42.308 0.00 0.00 45.00 2.34
2205 3603 3.702330 CGCTACATTATGAACGGAGTGA 58.298 45.455 0.00 0.00 45.00 3.41
2207 3605 3.492656 ATGCGCTACATTATGAACGGAGT 60.493 43.478 9.73 0.00 38.20 3.85
2239 3637 7.973388 TCAATGTTTGTGAGGTTTGACTTAAAG 59.027 33.333 0.00 0.00 0.00 1.85
2240 3638 7.757624 GTCAATGTTTGTGAGGTTTGACTTAAA 59.242 33.333 6.40 0.00 39.68 1.52
2245 3643 4.142271 TGGTCAATGTTTGTGAGGTTTGAC 60.142 41.667 5.31 5.31 41.21 3.18
2293 3695 8.579850 TGAATCTTATGTTGTTGGCTTTCTAT 57.420 30.769 0.00 0.00 0.00 1.98
2365 3772 9.280174 TGAACAAATTTATAGAGAGAACCGTTT 57.720 29.630 0.00 0.00 0.00 3.60
2367 3774 8.842358 TTGAACAAATTTATAGAGAGAACCGT 57.158 30.769 0.00 0.00 0.00 4.83
2368 3775 9.760660 CTTTGAACAAATTTATAGAGAGAACCG 57.239 33.333 0.44 0.00 0.00 4.44
2431 3846 9.077674 GCATCATACTAATACTCCTATGTTTCG 57.922 37.037 0.00 0.00 0.00 3.46
2432 3847 9.929180 TGCATCATACTAATACTCCTATGTTTC 57.071 33.333 0.00 0.00 0.00 2.78
2436 3851 9.935241 AAAGTGCATCATACTAATACTCCTATG 57.065 33.333 0.00 0.00 0.00 2.23
2461 3876 6.440436 GGATAAACACGCTAAACTCCAAAAA 58.560 36.000 0.00 0.00 0.00 1.94
2468 3883 2.004733 GCCGGATAAACACGCTAAACT 58.995 47.619 5.05 0.00 0.00 2.66
2475 3890 1.011242 CATGCGCCGGATAAACACG 60.011 57.895 5.05 0.00 0.00 4.49
2481 3896 0.038251 GATGAGACATGCGCCGGATA 60.038 55.000 5.05 0.00 0.00 2.59
2485 3900 3.333189 CCGATGAGACATGCGCCG 61.333 66.667 4.18 0.00 0.00 6.46
2495 3910 0.319900 CCGTCCCAATAGCCGATGAG 60.320 60.000 0.00 0.00 0.00 2.90
2506 3921 1.133761 TGTTGTTTGGATCCGTCCCAA 60.134 47.619 7.39 4.65 44.41 4.12
2508 3923 1.268625 GTTGTTGTTTGGATCCGTCCC 59.731 52.381 7.39 0.00 44.41 4.46
2513 3928 2.393764 CGCAAGTTGTTGTTTGGATCC 58.606 47.619 4.20 4.20 35.92 3.36
2526 3941 5.464168 AACGAGTGTTACTATACGCAAGTT 58.536 37.500 0.00 0.00 42.96 2.66
2528 3943 7.675270 ATAAACGAGTGTTACTATACGCAAG 57.325 36.000 0.00 0.00 37.31 4.01
2529 3944 8.464770 AAATAAACGAGTGTTACTATACGCAA 57.535 30.769 0.00 0.00 37.31 4.85
2537 3952 9.095065 CAGCCTAATAAATAAACGAGTGTTACT 57.905 33.333 0.00 0.00 37.31 2.24
2538 3953 8.876790 ACAGCCTAATAAATAAACGAGTGTTAC 58.123 33.333 0.00 0.00 37.31 2.50
2539 3954 8.875803 CACAGCCTAATAAATAAACGAGTGTTA 58.124 33.333 0.00 0.00 37.31 2.41
2540 3955 7.389607 ACACAGCCTAATAAATAAACGAGTGTT 59.610 33.333 0.00 0.00 40.98 3.32
2541 3956 6.877322 ACACAGCCTAATAAATAAACGAGTGT 59.123 34.615 0.00 0.00 0.00 3.55
2542 3957 7.303634 ACACAGCCTAATAAATAAACGAGTG 57.696 36.000 0.00 0.00 0.00 3.51
2543 3958 9.257651 GATACACAGCCTAATAAATAAACGAGT 57.742 33.333 0.00 0.00 0.00 4.18
2544 3959 9.256477 TGATACACAGCCTAATAAATAAACGAG 57.744 33.333 0.00 0.00 0.00 4.18
2545 3960 9.037737 GTGATACACAGCCTAATAAATAAACGA 57.962 33.333 0.00 0.00 34.08 3.85
2546 3961 9.042008 AGTGATACACAGCCTAATAAATAAACG 57.958 33.333 4.75 0.00 36.74 3.60
2548 3963 9.256477 CGAGTGATACACAGCCTAATAAATAAA 57.744 33.333 4.75 0.00 36.74 1.40
2549 3964 8.418662 ACGAGTGATACACAGCCTAATAAATAA 58.581 33.333 4.75 0.00 36.74 1.40
2550 3965 7.948357 ACGAGTGATACACAGCCTAATAAATA 58.052 34.615 4.75 0.00 36.74 1.40
2551 3966 6.817184 ACGAGTGATACACAGCCTAATAAAT 58.183 36.000 4.75 0.00 36.74 1.40
2552 3967 6.216801 ACGAGTGATACACAGCCTAATAAA 57.783 37.500 4.75 0.00 36.74 1.40
2553 3968 5.847111 ACGAGTGATACACAGCCTAATAA 57.153 39.130 4.75 0.00 36.74 1.40
2554 3969 7.881751 ACTATACGAGTGATACACAGCCTAATA 59.118 37.037 4.75 0.00 36.87 0.98
2555 3970 6.715718 ACTATACGAGTGATACACAGCCTAAT 59.284 38.462 4.75 0.00 36.87 1.73
2556 3971 6.060136 ACTATACGAGTGATACACAGCCTAA 58.940 40.000 4.75 0.00 36.87 2.69
2557 3972 5.618236 ACTATACGAGTGATACACAGCCTA 58.382 41.667 4.75 0.00 36.87 3.93
2558 3973 4.462133 ACTATACGAGTGATACACAGCCT 58.538 43.478 4.75 0.00 36.87 4.58
2559 3974 4.832590 ACTATACGAGTGATACACAGCC 57.167 45.455 4.75 0.00 36.87 4.85
2560 3975 6.141462 GGTTACTATACGAGTGATACACAGC 58.859 44.000 4.75 0.00 39.39 4.40
2561 3976 6.018425 ACGGTTACTATACGAGTGATACACAG 60.018 42.308 4.75 1.18 39.39 3.66
2562 3977 5.817296 ACGGTTACTATACGAGTGATACACA 59.183 40.000 4.75 0.00 39.39 3.72
2563 3978 6.292389 ACGGTTACTATACGAGTGATACAC 57.708 41.667 0.00 0.00 39.39 2.90
2564 3979 6.925610 AACGGTTACTATACGAGTGATACA 57.074 37.500 0.00 0.00 39.39 2.29
2565 3980 8.012241 CCTTAACGGTTACTATACGAGTGATAC 58.988 40.741 0.00 0.00 39.39 2.24
2566 3981 7.307989 GCCTTAACGGTTACTATACGAGTGATA 60.308 40.741 0.00 0.00 35.79 2.15
2567 3982 6.514048 GCCTTAACGGTTACTATACGAGTGAT 60.514 42.308 0.00 0.00 35.79 3.06
2568 3983 5.220854 GCCTTAACGGTTACTATACGAGTGA 60.221 44.000 0.00 0.00 35.79 3.41
2569 3984 4.972440 GCCTTAACGGTTACTATACGAGTG 59.028 45.833 0.00 0.00 35.79 3.51
2570 3985 4.884164 AGCCTTAACGGTTACTATACGAGT 59.116 41.667 0.00 0.00 37.35 4.18
2571 3986 5.429957 AGCCTTAACGGTTACTATACGAG 57.570 43.478 0.00 0.00 34.25 4.18
2572 3987 4.275936 GGAGCCTTAACGGTTACTATACGA 59.724 45.833 0.00 0.00 34.25 3.43
2573 3988 4.540824 GGAGCCTTAACGGTTACTATACG 58.459 47.826 0.00 0.00 34.25 3.06
2574 3989 4.540824 CGGAGCCTTAACGGTTACTATAC 58.459 47.826 0.00 0.00 34.25 1.47
2575 3990 3.569701 CCGGAGCCTTAACGGTTACTATA 59.430 47.826 0.00 0.00 42.53 1.31
2576 3991 2.363359 CCGGAGCCTTAACGGTTACTAT 59.637 50.000 0.00 0.00 42.53 2.12
2577 3992 1.750778 CCGGAGCCTTAACGGTTACTA 59.249 52.381 0.00 0.00 42.53 1.82
2578 3993 0.533951 CCGGAGCCTTAACGGTTACT 59.466 55.000 0.00 0.00 42.53 2.24
2579 3994 3.055144 CCGGAGCCTTAACGGTTAC 57.945 57.895 0.00 0.00 42.53 2.50
2584 3999 2.884207 GCGACCGGAGCCTTAACG 60.884 66.667 9.46 1.70 0.00 3.18
2602 4017 0.248907 CCATCTACCTACGCACGTGG 60.249 60.000 18.88 10.05 0.00 4.94
2603 4018 0.248907 CCCATCTACCTACGCACGTG 60.249 60.000 12.28 12.28 0.00 4.49
2604 4019 2.012902 GCCCATCTACCTACGCACGT 62.013 60.000 0.00 0.00 0.00 4.49
2605 4020 1.299926 GCCCATCTACCTACGCACG 60.300 63.158 0.00 0.00 0.00 5.34
2606 4021 1.269998 CTAGCCCATCTACCTACGCAC 59.730 57.143 0.00 0.00 0.00 5.34
2607 4022 1.617322 CTAGCCCATCTACCTACGCA 58.383 55.000 0.00 0.00 0.00 5.24
2608 4023 0.244178 GCTAGCCCATCTACCTACGC 59.756 60.000 2.29 0.00 0.00 4.42
2609 4024 0.889306 GGCTAGCCCATCTACCTACG 59.111 60.000 24.19 0.00 0.00 3.51
2621 4036 4.691216 CGTTTAATCTCTAATGGGCTAGCC 59.309 45.833 26.55 26.55 0.00 3.93
2622 4037 5.539048 TCGTTTAATCTCTAATGGGCTAGC 58.461 41.667 6.04 6.04 0.00 3.42
2623 4038 6.984474 TGTTCGTTTAATCTCTAATGGGCTAG 59.016 38.462 0.00 0.00 0.00 3.42
2624 4039 6.880484 TGTTCGTTTAATCTCTAATGGGCTA 58.120 36.000 0.00 0.00 0.00 3.93
2625 4040 5.741011 TGTTCGTTTAATCTCTAATGGGCT 58.259 37.500 0.00 0.00 0.00 5.19
2626 4041 5.815740 TCTGTTCGTTTAATCTCTAATGGGC 59.184 40.000 0.00 0.00 0.00 5.36
2627 4042 9.542462 TTATCTGTTCGTTTAATCTCTAATGGG 57.458 33.333 0.00 0.00 0.00 4.00
2641 4056 9.825972 CAAAAACAGTGATATTATCTGTTCGTT 57.174 29.630 15.93 12.26 46.95 3.85
2642 4057 8.999431 ACAAAAACAGTGATATTATCTGTTCGT 58.001 29.630 15.93 12.43 46.95 3.85
2643 4058 9.825972 AACAAAAACAGTGATATTATCTGTTCG 57.174 29.630 15.93 12.04 46.95 3.95
2651 4066 9.944663 GACACAGAAACAAAAACAGTGATATTA 57.055 29.630 0.00 0.00 0.00 0.98
2652 4067 8.686334 AGACACAGAAACAAAAACAGTGATATT 58.314 29.630 0.00 0.00 0.00 1.28
2653 4068 8.225603 AGACACAGAAACAAAAACAGTGATAT 57.774 30.769 0.00 0.00 0.00 1.63
2654 4069 7.335673 TGAGACACAGAAACAAAAACAGTGATA 59.664 33.333 0.00 0.00 0.00 2.15
2655 4070 6.150976 TGAGACACAGAAACAAAAACAGTGAT 59.849 34.615 0.00 0.00 0.00 3.06
2656 4071 5.471797 TGAGACACAGAAACAAAAACAGTGA 59.528 36.000 0.00 0.00 0.00 3.41
2657 4072 5.698832 TGAGACACAGAAACAAAAACAGTG 58.301 37.500 0.00 0.00 0.00 3.66
2658 4073 5.957842 TGAGACACAGAAACAAAAACAGT 57.042 34.783 0.00 0.00 0.00 3.55
2659 4074 6.640499 TGTTTGAGACACAGAAACAAAAACAG 59.360 34.615 0.00 0.00 32.81 3.16
2660 4075 6.507900 TGTTTGAGACACAGAAACAAAAACA 58.492 32.000 0.00 0.00 33.85 2.83
2661 4076 7.401484 TTGTTTGAGACACAGAAACAAAAAC 57.599 32.000 0.00 0.00 36.73 2.43
2662 4077 8.425577 TTTTGTTTGAGACACAGAAACAAAAA 57.574 26.923 22.70 12.43 45.55 1.94
2663 4078 7.170658 CCTTTTGTTTGAGACACAGAAACAAAA 59.829 33.333 23.09 23.09 45.89 2.44
2664 4079 6.644592 CCTTTTGTTTGAGACACAGAAACAAA 59.355 34.615 14.72 14.72 42.38 2.83
2665 4080 6.015856 TCCTTTTGTTTGAGACACAGAAACAA 60.016 34.615 0.00 0.00 37.40 2.83
2666 4081 5.475220 TCCTTTTGTTTGAGACACAGAAACA 59.525 36.000 0.00 0.00 38.18 2.83
2667 4082 5.949735 TCCTTTTGTTTGAGACACAGAAAC 58.050 37.500 0.00 0.00 38.18 2.78
2668 4083 6.386654 GTTCCTTTTGTTTGAGACACAGAAA 58.613 36.000 0.00 0.00 38.18 2.52
2669 4084 5.105917 GGTTCCTTTTGTTTGAGACACAGAA 60.106 40.000 0.00 0.00 38.18 3.02
2670 4085 4.398044 GGTTCCTTTTGTTTGAGACACAGA 59.602 41.667 0.00 0.00 38.18 3.41
2671 4086 4.157656 TGGTTCCTTTTGTTTGAGACACAG 59.842 41.667 0.00 0.00 38.18 3.66
2672 4087 4.082845 TGGTTCCTTTTGTTTGAGACACA 58.917 39.130 0.00 0.00 38.18 3.72
2673 4088 4.712122 TGGTTCCTTTTGTTTGAGACAC 57.288 40.909 0.00 0.00 38.18 3.67
2674 4089 5.930837 AATGGTTCCTTTTGTTTGAGACA 57.069 34.783 0.00 0.00 36.19 3.41
2675 4090 7.609760 AAAAATGGTTCCTTTTGTTTGAGAC 57.390 32.000 3.98 0.00 0.00 3.36
2696 4111 6.597562 ACCATACCTTGTACACTGAGAAAAA 58.402 36.000 0.00 0.00 0.00 1.94
2697 4112 6.182507 ACCATACCTTGTACACTGAGAAAA 57.817 37.500 0.00 0.00 0.00 2.29
2698 4113 5.818678 ACCATACCTTGTACACTGAGAAA 57.181 39.130 0.00 0.00 0.00 2.52
2699 4114 6.629515 GCATACCATACCTTGTACACTGAGAA 60.630 42.308 0.00 0.00 0.00 2.87
2700 4115 5.163447 GCATACCATACCTTGTACACTGAGA 60.163 44.000 0.00 0.00 0.00 3.27
2701 4116 5.050490 GCATACCATACCTTGTACACTGAG 58.950 45.833 0.00 0.00 0.00 3.35
2702 4117 4.714802 AGCATACCATACCTTGTACACTGA 59.285 41.667 0.00 0.00 0.00 3.41
2703 4118 5.023533 AGCATACCATACCTTGTACACTG 57.976 43.478 0.00 0.00 0.00 3.66
2704 4119 4.962995 AGAGCATACCATACCTTGTACACT 59.037 41.667 0.00 0.00 0.00 3.55
2705 4120 5.163447 TGAGAGCATACCATACCTTGTACAC 60.163 44.000 0.00 0.00 0.00 2.90
2706 4121 4.959839 TGAGAGCATACCATACCTTGTACA 59.040 41.667 0.00 0.00 0.00 2.90
2707 4122 5.531122 TGAGAGCATACCATACCTTGTAC 57.469 43.478 0.00 0.00 0.00 2.90
2708 4123 5.661312 ACTTGAGAGCATACCATACCTTGTA 59.339 40.000 0.00 0.00 0.00 2.41
2709 4124 4.471386 ACTTGAGAGCATACCATACCTTGT 59.529 41.667 0.00 0.00 0.00 3.16
2710 4125 5.028549 ACTTGAGAGCATACCATACCTTG 57.971 43.478 0.00 0.00 0.00 3.61
2711 4126 4.101741 GGACTTGAGAGCATACCATACCTT 59.898 45.833 0.00 0.00 0.00 3.50
2712 4127 3.643792 GGACTTGAGAGCATACCATACCT 59.356 47.826 0.00 0.00 0.00 3.08
2713 4128 3.643792 AGGACTTGAGAGCATACCATACC 59.356 47.826 0.00 0.00 0.00 2.73
2714 4129 4.342378 TCAGGACTTGAGAGCATACCATAC 59.658 45.833 0.00 0.00 0.00 2.39
2715 4130 4.546674 TCAGGACTTGAGAGCATACCATA 58.453 43.478 0.00 0.00 0.00 2.74
2716 4131 3.378512 TCAGGACTTGAGAGCATACCAT 58.621 45.455 0.00 0.00 0.00 3.55
2717 4132 2.820178 TCAGGACTTGAGAGCATACCA 58.180 47.619 0.00 0.00 0.00 3.25
2718 4133 3.895232 TTCAGGACTTGAGAGCATACC 57.105 47.619 0.00 0.00 37.07 2.73
2719 4134 4.047822 CGATTCAGGACTTGAGAGCATAC 58.952 47.826 0.00 0.00 37.07 2.39
2720 4135 3.954258 TCGATTCAGGACTTGAGAGCATA 59.046 43.478 0.00 0.00 37.07 3.14
2721 4136 2.762887 TCGATTCAGGACTTGAGAGCAT 59.237 45.455 0.00 0.00 37.07 3.79
2722 4137 2.171003 TCGATTCAGGACTTGAGAGCA 58.829 47.619 0.00 0.00 37.07 4.26
2723 4138 2.949451 TCGATTCAGGACTTGAGAGC 57.051 50.000 0.00 0.00 37.07 4.09
2724 4139 4.629200 CCTTTTCGATTCAGGACTTGAGAG 59.371 45.833 0.00 0.00 37.07 3.20
2725 4140 4.283467 TCCTTTTCGATTCAGGACTTGAGA 59.717 41.667 4.09 0.00 37.07 3.27
2726 4141 4.569943 TCCTTTTCGATTCAGGACTTGAG 58.430 43.478 4.09 0.00 37.07 3.02
2727 4142 4.617253 TCCTTTTCGATTCAGGACTTGA 57.383 40.909 4.09 0.00 31.33 3.02
2732 4147 4.261801 GGAATGTCCTTTTCGATTCAGGA 58.738 43.478 4.09 4.09 34.10 3.86
2733 4148 3.063997 CGGAATGTCCTTTTCGATTCAGG 59.936 47.826 0.00 0.00 33.30 3.86
2734 4149 3.063997 CCGGAATGTCCTTTTCGATTCAG 59.936 47.826 0.00 0.00 33.30 3.02
2735 4150 3.006940 CCGGAATGTCCTTTTCGATTCA 58.993 45.455 0.00 0.00 33.30 2.57
2736 4151 3.267483 TCCGGAATGTCCTTTTCGATTC 58.733 45.455 0.00 0.00 33.30 2.52
2737 4152 3.343941 TCCGGAATGTCCTTTTCGATT 57.656 42.857 0.00 0.00 33.30 3.34
2738 4153 3.560636 ATCCGGAATGTCCTTTTCGAT 57.439 42.857 9.01 0.00 33.30 3.59
2739 4154 3.343941 AATCCGGAATGTCCTTTTCGA 57.656 42.857 9.01 0.00 33.30 3.71
2740 4155 3.438781 TGAAATCCGGAATGTCCTTTTCG 59.561 43.478 9.01 0.00 33.79 3.46
2741 4156 5.582689 ATGAAATCCGGAATGTCCTTTTC 57.417 39.130 9.01 12.78 33.30 2.29
2742 4157 8.760980 TTATATGAAATCCGGAATGTCCTTTT 57.239 30.769 9.01 1.64 33.30 2.27
2743 4158 8.796475 CATTATATGAAATCCGGAATGTCCTTT 58.204 33.333 9.01 2.53 33.30 3.11
2744 4159 7.944554 ACATTATATGAAATCCGGAATGTCCTT 59.055 33.333 9.01 0.00 32.10 3.36
2745 4160 7.461749 ACATTATATGAAATCCGGAATGTCCT 58.538 34.615 9.01 1.75 32.10 3.85
2746 4161 7.687941 ACATTATATGAAATCCGGAATGTCC 57.312 36.000 9.01 0.00 32.10 4.02
2776 4191 9.943163 CCCATGAACAATTTTTAAAATTTCGTT 57.057 25.926 12.36 13.60 0.00 3.85
2777 4192 9.114952 ACCCATGAACAATTTTTAAAATTTCGT 57.885 25.926 12.36 7.98 0.00 3.85
2778 4193 9.943163 AACCCATGAACAATTTTTAAAATTTCG 57.057 25.926 12.36 6.05 0.00 3.46
2790 4205 8.845227 GGAACATTTTTAAACCCATGAACAATT 58.155 29.630 0.00 0.00 0.00 2.32
2791 4206 7.995488 TGGAACATTTTTAAACCCATGAACAAT 59.005 29.630 0.00 0.00 0.00 2.71
2792 4207 7.338710 TGGAACATTTTTAAACCCATGAACAA 58.661 30.769 0.00 0.00 0.00 2.83
2793 4208 6.889198 TGGAACATTTTTAAACCCATGAACA 58.111 32.000 0.00 0.00 0.00 3.18
2794 4209 7.793927 TTGGAACATTTTTAAACCCATGAAC 57.206 32.000 0.00 3.03 39.30 3.18
2795 4210 8.049721 ACTTTGGAACATTTTTAAACCCATGAA 58.950 29.630 0.00 0.00 39.30 2.57
2796 4211 7.569240 ACTTTGGAACATTTTTAAACCCATGA 58.431 30.769 0.00 0.00 39.30 3.07
2797 4212 7.800155 ACTTTGGAACATTTTTAAACCCATG 57.200 32.000 0.00 0.00 39.30 3.66
2798 4213 8.815565 AAACTTTGGAACATTTTTAAACCCAT 57.184 26.923 0.00 0.00 39.30 4.00
2799 4214 7.883311 TGAAACTTTGGAACATTTTTAAACCCA 59.117 29.630 0.00 0.00 39.30 4.51
2800 4215 8.270080 TGAAACTTTGGAACATTTTTAAACCC 57.730 30.769 0.00 0.00 39.30 4.11
2806 4221 9.623350 CATGTTTTGAAACTTTGGAACATTTTT 57.377 25.926 7.97 0.00 37.81 1.94
2807 4222 8.791675 ACATGTTTTGAAACTTTGGAACATTTT 58.208 25.926 7.97 0.00 37.81 1.82
2808 4223 8.334263 ACATGTTTTGAAACTTTGGAACATTT 57.666 26.923 7.97 0.00 37.81 2.32
2809 4224 7.920160 ACATGTTTTGAAACTTTGGAACATT 57.080 28.000 7.97 0.00 37.81 2.71
2810 4225 7.920160 AACATGTTTTGAAACTTTGGAACAT 57.080 28.000 4.92 0.00 37.81 2.71
2811 4226 7.872993 TGTAACATGTTTTGAAACTTTGGAACA 59.127 29.630 17.78 6.68 39.59 3.18
2812 4227 8.245701 TGTAACATGTTTTGAAACTTTGGAAC 57.754 30.769 17.78 3.98 39.59 3.62
2813 4228 8.713271 GTTGTAACATGTTTTGAAACTTTGGAA 58.287 29.630 17.78 0.00 39.59 3.53
2814 4229 7.872993 TGTTGTAACATGTTTTGAAACTTTGGA 59.127 29.630 17.78 0.00 35.52 3.53
2815 4230 8.023050 TGTTGTAACATGTTTTGAAACTTTGG 57.977 30.769 17.78 0.00 35.52 3.28
2816 4231 9.869844 TTTGTTGTAACATGTTTTGAAACTTTG 57.130 25.926 17.78 7.92 38.95 2.77
2817 4232 9.871299 GTTTGTTGTAACATGTTTTGAAACTTT 57.129 25.926 17.78 0.00 38.95 2.66
2818 4233 9.046296 TGTTTGTTGTAACATGTTTTGAAACTT 57.954 25.926 17.78 0.00 38.95 2.66
2819 4234 8.594881 TGTTTGTTGTAACATGTTTTGAAACT 57.405 26.923 17.78 0.00 38.95 2.66
2820 4235 9.097672 GTTGTTTGTTGTAACATGTTTTGAAAC 57.902 29.630 17.78 16.91 38.95 2.78
2821 4236 8.826710 TGTTGTTTGTTGTAACATGTTTTGAAA 58.173 25.926 17.78 6.62 38.95 2.69
2822 4237 8.365399 TGTTGTTTGTTGTAACATGTTTTGAA 57.635 26.923 17.78 4.55 38.95 2.69
2823 4238 7.946655 TGTTGTTTGTTGTAACATGTTTTGA 57.053 28.000 17.78 0.00 38.95 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.