Multiple sequence alignment - TraesCS3B01G281400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G281400 chr3B 100.000 3615 0 0 1 3615 452105782 452102168 0.000000e+00 6676.0
1 TraesCS3B01G281400 chr3B 100.000 40 0 0 745 784 452104995 452104956 1.390000e-09 75.0
2 TraesCS3B01G281400 chr3B 100.000 40 0 0 788 827 452105038 452104999 1.390000e-09 75.0
3 TraesCS3B01G281400 chr3D 94.467 2259 74 22 799 3040 352949972 352947748 0.000000e+00 3432.0
4 TraesCS3B01G281400 chr3D 87.234 799 83 7 1 787 352950732 352949941 0.000000e+00 893.0
5 TraesCS3B01G281400 chr3D 85.957 235 26 5 3043 3274 352947714 352947484 1.000000e-60 244.0
6 TraesCS3B01G281400 chr3D 95.349 43 2 0 3348 3390 352947486 352947444 6.480000e-08 69.4
7 TraesCS3B01G281400 chr3A 94.763 2177 73 19 794 2931 471818466 471816292 0.000000e+00 3350.0
8 TraesCS3B01G281400 chr3A 88.362 232 21 4 3043 3274 471816179 471815954 1.280000e-69 274.0
9 TraesCS3B01G281400 chr3A 97.500 40 1 0 3348 3387 471815956 471815917 6.480000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G281400 chr3B 452102168 452105782 3614 True 2275.333333 6676 100.000000 1 3615 3 chr3B.!!$R1 3614
1 TraesCS3B01G281400 chr3D 352947444 352950732 3288 True 1159.600000 3432 90.751750 1 3390 4 chr3D.!!$R1 3389
2 TraesCS3B01G281400 chr3A 471815917 471818466 2549 True 1231.133333 3350 93.541667 794 3387 3 chr3A.!!$R1 2593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
381 382 0.036732 GAGAGCCATGTGGACAACCA 59.963 55.0 2.55 0.0 44.76 3.67 F
392 393 0.108138 GGACAACCATCTCCTCACCG 60.108 60.0 0.00 0.0 35.97 4.94 F
771 780 0.322975 AGAGTTCGGTTGCAGATGCT 59.677 50.0 6.35 0.0 42.66 3.79 F
773 782 0.322975 AGTTCGGTTGCAGATGCTCT 59.677 50.0 6.35 0.0 42.66 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2241 2270 0.234625 GAGCGCGTTGAACACATCAA 59.765 50.000 8.43 0.0 45.71 2.57 R
2397 2426 1.617018 CCATCCTGAGCCTCGACCAA 61.617 60.000 0.00 0.0 0.00 3.67 R
2508 2537 0.378257 GGGCAACATACAGCATGACG 59.622 55.000 0.00 0.0 38.10 4.35 R
2755 2790 2.032799 CCTCAAAACACAAGCGCACTTA 59.967 45.455 11.47 0.0 33.74 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.040893 TGATAGACATGGACGGGCGT 61.041 55.000 0.00 0.00 0.00 5.68
33 34 2.028125 ATAGACATGGACGGGCGTGG 62.028 60.000 0.00 0.00 0.00 4.94
59 60 0.532862 CAAGGTGGTTGTGCGACTCT 60.533 55.000 0.00 0.00 0.00 3.24
88 89 4.536316 CTCTGTCATGAGGGCTGC 57.464 61.111 0.00 0.00 0.00 5.25
90 91 2.513204 CTGTCATGAGGGCTGCCG 60.513 66.667 13.40 0.00 0.00 5.69
109 110 2.314215 TGGCCTCCCTCGTCCTCTA 61.314 63.158 3.32 0.00 0.00 2.43
120 121 1.810532 GTCCTCTACCTCGCACTGG 59.189 63.158 0.00 0.00 0.00 4.00
125 126 2.687200 TACCTCGCACTGGGGCAT 60.687 61.111 0.00 0.00 0.00 4.40
142 143 3.529341 ATGCCTCGCGTCCACAACA 62.529 57.895 5.77 0.00 0.00 3.33
147 148 2.053465 CGCGTCCACAACACAACG 60.053 61.111 0.00 0.00 38.13 4.10
159 160 2.022129 CACAACGCCTCGACTCCAC 61.022 63.158 0.00 0.00 0.00 4.02
161 162 1.300620 CAACGCCTCGACTCCACAA 60.301 57.895 0.00 0.00 0.00 3.33
165 166 2.927580 GCCTCGACTCCACAACGGA 61.928 63.158 0.00 0.00 43.61 4.69
182 183 2.203596 ACGGGTCGTGAGGGAAGT 60.204 61.111 0.00 0.00 39.18 3.01
186 187 1.186267 GGGTCGTGAGGGAAGTCACT 61.186 60.000 2.76 0.00 44.07 3.41
270 271 2.946762 GCAGTGGTCGTTGCCTTC 59.053 61.111 0.00 0.00 34.28 3.46
302 303 3.753434 CACGTGCCTCGAGCCTCT 61.753 66.667 6.99 0.00 42.71 3.69
332 333 1.382522 GATCCAAGCGCCATTTGAGA 58.617 50.000 2.29 2.78 0.00 3.27
372 373 3.069980 GAGCGACGGAGAGCCATGT 62.070 63.158 0.00 0.00 35.66 3.21
377 378 1.888436 GACGGAGAGCCATGTGGACA 61.888 60.000 2.55 0.00 37.39 4.02
381 382 0.036732 GAGAGCCATGTGGACAACCA 59.963 55.000 2.55 0.00 44.76 3.67
391 392 0.984230 TGGACAACCATCTCCTCACC 59.016 55.000 0.00 0.00 41.77 4.02
392 393 0.108138 GGACAACCATCTCCTCACCG 60.108 60.000 0.00 0.00 35.97 4.94
393 394 0.895530 GACAACCATCTCCTCACCGA 59.104 55.000 0.00 0.00 0.00 4.69
394 395 0.608640 ACAACCATCTCCTCACCGAC 59.391 55.000 0.00 0.00 0.00 4.79
421 422 0.698818 GGGACAAGACCCCAGTTGAT 59.301 55.000 0.00 0.00 43.81 2.57
465 466 2.815211 CACTGCCCGACATGTCCG 60.815 66.667 20.03 13.38 0.00 4.79
481 482 2.097918 CGAGACGGTCGGAGTTCG 59.902 66.667 1.89 2.49 45.58 3.95
506 507 1.673767 AAGGAGCTTGGGGATGAAGA 58.326 50.000 0.00 0.00 0.00 2.87
507 508 1.904440 AGGAGCTTGGGGATGAAGAT 58.096 50.000 0.00 0.00 0.00 2.40
511 512 3.410508 GAGCTTGGGGATGAAGATGATC 58.589 50.000 0.00 0.00 0.00 2.92
516 517 1.338579 GGGGATGAAGATGATCGGAGC 60.339 57.143 0.00 0.00 0.00 4.70
531 532 1.112113 GGAGCGGAATGGAGTGACTA 58.888 55.000 0.00 0.00 0.00 2.59
560 561 1.182667 CCGGAGTGCGGATATGGATA 58.817 55.000 19.68 0.00 0.00 2.59
573 574 7.071824 TGCGGATATGGATAAATATATGTGGGA 59.928 37.037 0.00 0.00 0.00 4.37
582 583 8.692710 GGATAAATATATGTGGGATCGTAGTGA 58.307 37.037 0.00 0.00 0.00 3.41
585 586 6.761099 ATATATGTGGGATCGTAGTGAGTC 57.239 41.667 0.00 0.00 0.00 3.36
591 592 3.220110 GGGATCGTAGTGAGTCATGGTA 58.780 50.000 0.00 0.00 0.00 3.25
605 606 1.464376 ATGGTAGGCCTGATCCGACG 61.464 60.000 17.99 0.00 33.26 5.12
624 625 2.350738 TGACGGACACATCTGAGCA 58.649 52.632 0.00 0.00 34.98 4.26
626 627 1.276138 TGACGGACACATCTGAGCATT 59.724 47.619 0.00 0.00 34.98 3.56
627 628 1.929836 GACGGACACATCTGAGCATTC 59.070 52.381 0.00 0.00 34.98 2.67
630 631 3.005554 CGGACACATCTGAGCATTCTTT 58.994 45.455 0.00 0.00 32.26 2.52
631 632 3.063180 CGGACACATCTGAGCATTCTTTC 59.937 47.826 0.00 0.00 32.26 2.62
632 633 3.376546 GGACACATCTGAGCATTCTTTCC 59.623 47.826 0.00 0.00 0.00 3.13
633 634 4.005650 GACACATCTGAGCATTCTTTCCA 58.994 43.478 0.00 0.00 0.00 3.53
634 635 4.008330 ACACATCTGAGCATTCTTTCCAG 58.992 43.478 0.00 0.00 0.00 3.86
636 637 4.458295 CACATCTGAGCATTCTTTCCAGTT 59.542 41.667 0.00 0.00 0.00 3.16
637 638 5.645067 CACATCTGAGCATTCTTTCCAGTTA 59.355 40.000 0.00 0.00 0.00 2.24
638 639 6.318144 CACATCTGAGCATTCTTTCCAGTTAT 59.682 38.462 0.00 0.00 0.00 1.89
639 640 6.318144 ACATCTGAGCATTCTTTCCAGTTATG 59.682 38.462 0.00 0.00 0.00 1.90
659 668 1.373570 GACTGCATACAAGAGGTGCC 58.626 55.000 0.00 0.00 38.06 5.01
667 676 4.021925 AAGAGGTGCCGGTCAGCC 62.022 66.667 19.76 13.70 43.95 4.85
699 708 2.021723 GCCAGGTTTGCCATATCCGAA 61.022 52.381 0.00 0.00 37.19 4.30
747 756 2.783288 CCGGGCGTCTAGGACCTTC 61.783 68.421 0.00 0.00 30.57 3.46
754 763 2.082231 CGTCTAGGACCTTCACGAAGA 58.918 52.381 16.37 2.59 40.79 2.87
755 764 2.096174 CGTCTAGGACCTTCACGAAGAG 59.904 54.545 16.37 0.00 40.79 2.85
757 766 3.506844 GTCTAGGACCTTCACGAAGAGTT 59.493 47.826 8.38 0.00 40.79 3.01
758 767 3.757493 TCTAGGACCTTCACGAAGAGTTC 59.243 47.826 8.38 3.96 40.79 3.01
770 779 1.129437 GAAGAGTTCGGTTGCAGATGC 59.871 52.381 0.00 0.00 42.50 3.91
771 780 0.322975 AGAGTTCGGTTGCAGATGCT 59.677 50.000 6.35 0.00 42.66 3.79
772 781 0.723981 GAGTTCGGTTGCAGATGCTC 59.276 55.000 6.35 0.00 42.66 4.26
773 782 0.322975 AGTTCGGTTGCAGATGCTCT 59.677 50.000 6.35 0.00 42.66 4.09
774 783 1.160137 GTTCGGTTGCAGATGCTCTT 58.840 50.000 6.35 0.00 42.66 2.85
775 784 2.028112 AGTTCGGTTGCAGATGCTCTTA 60.028 45.455 6.35 0.00 42.66 2.10
776 785 2.742053 GTTCGGTTGCAGATGCTCTTAA 59.258 45.455 6.35 0.00 42.66 1.85
777 786 3.266510 TCGGTTGCAGATGCTCTTAAT 57.733 42.857 6.35 0.00 42.66 1.40
778 787 3.609853 TCGGTTGCAGATGCTCTTAATT 58.390 40.909 6.35 0.00 42.66 1.40
779 788 3.623060 TCGGTTGCAGATGCTCTTAATTC 59.377 43.478 6.35 0.00 42.66 2.17
780 789 3.374988 CGGTTGCAGATGCTCTTAATTCA 59.625 43.478 6.35 0.00 42.66 2.57
781 790 4.142622 CGGTTGCAGATGCTCTTAATTCAA 60.143 41.667 6.35 0.00 42.66 2.69
782 791 5.619757 CGGTTGCAGATGCTCTTAATTCAAA 60.620 40.000 6.35 0.00 42.66 2.69
783 792 5.803967 GGTTGCAGATGCTCTTAATTCAAAG 59.196 40.000 6.35 0.00 42.66 2.77
784 793 6.385033 GTTGCAGATGCTCTTAATTCAAAGT 58.615 36.000 6.35 0.00 42.66 2.66
785 794 5.946298 TGCAGATGCTCTTAATTCAAAGTG 58.054 37.500 6.35 0.00 42.66 3.16
786 795 5.474532 TGCAGATGCTCTTAATTCAAAGTGT 59.525 36.000 6.35 0.00 42.66 3.55
787 796 6.026513 GCAGATGCTCTTAATTCAAAGTGTC 58.973 40.000 0.00 0.00 38.21 3.67
788 797 6.128063 GCAGATGCTCTTAATTCAAAGTGTCT 60.128 38.462 0.00 0.00 38.21 3.41
789 798 7.574592 GCAGATGCTCTTAATTCAAAGTGTCTT 60.575 37.037 0.00 0.00 38.21 3.01
790 799 7.961827 CAGATGCTCTTAATTCAAAGTGTCTTC 59.038 37.037 0.00 0.00 0.00 2.87
791 800 7.663081 AGATGCTCTTAATTCAAAGTGTCTTCA 59.337 33.333 0.00 0.00 0.00 3.02
792 801 6.959361 TGCTCTTAATTCAAAGTGTCTTCAC 58.041 36.000 0.00 0.00 44.15 3.18
827 836 4.990257 TGCAGATGCTCTTAATTCAAAGC 58.010 39.130 6.35 0.00 42.66 3.51
836 846 8.213518 TGCTCTTAATTCAAAGCTTGTATAGG 57.786 34.615 0.00 0.00 35.76 2.57
878 889 1.134753 TCCGGTTGTAATATCGCGTGT 59.865 47.619 5.77 0.00 0.00 4.49
893 904 2.750948 GCGTGTTGTAGAGAGAAACCA 58.249 47.619 0.00 0.00 0.00 3.67
898 909 6.092259 GCGTGTTGTAGAGAGAAACCATAAAT 59.908 38.462 0.00 0.00 0.00 1.40
900 911 8.808529 CGTGTTGTAGAGAGAAACCATAAATAG 58.191 37.037 0.00 0.00 0.00 1.73
943 965 5.768333 AAACGTATCTTTGGTACGCTTAC 57.232 39.130 9.86 0.00 46.46 2.34
950 976 4.107622 TCTTTGGTACGCTTACGAATAGC 58.892 43.478 0.00 0.00 43.93 2.97
977 1003 0.608640 ATAACAGATCCGATCCGCCC 59.391 55.000 4.67 0.00 0.00 6.13
980 1006 4.241076 AGATCCGATCCGCCCCCT 62.241 66.667 4.67 0.00 0.00 4.79
981 1007 4.008933 GATCCGATCCGCCCCCTG 62.009 72.222 0.00 0.00 0.00 4.45
1211 1240 3.005539 AGCACATGACCCTCGCCT 61.006 61.111 0.00 0.00 0.00 5.52
1212 1241 2.512515 GCACATGACCCTCGCCTC 60.513 66.667 0.00 0.00 0.00 4.70
1477 1506 2.060326 TGTTCCGCTTCAACTACTCG 57.940 50.000 0.00 0.00 0.00 4.18
2041 2070 2.072487 GCTGCCCCAGGAGGATGTA 61.072 63.158 0.00 0.00 38.24 2.29
2191 2220 0.478072 ATGTTGCTGTCAAGACCCCA 59.522 50.000 0.00 0.00 31.93 4.96
2241 2270 1.322442 GTGGCCAAGCAGAAGAACTT 58.678 50.000 7.24 0.00 0.00 2.66
2338 2367 4.081198 GGGCAGCTGCACTATTATCTCTAT 60.081 45.833 37.63 0.00 42.27 1.98
2397 2426 2.196595 TGGGCTTGTGCTTCTATAGGT 58.803 47.619 0.00 0.00 39.59 3.08
2508 2537 1.818674 ACAGGCGATGGTTTGATTTCC 59.181 47.619 0.00 0.00 0.00 3.13
2534 2563 1.896220 CTGTATGTTGCCCAGTGTGT 58.104 50.000 0.00 0.00 0.00 3.72
2535 2564 1.536766 CTGTATGTTGCCCAGTGTGTG 59.463 52.381 0.00 0.00 0.00 3.82
2680 2713 8.795786 TTTTCAATTAGTTACATTCAGTGTGC 57.204 30.769 0.00 0.00 42.24 4.57
2682 2715 6.898041 TCAATTAGTTACATTCAGTGTGCAC 58.102 36.000 10.75 10.75 42.24 4.57
2762 2797 7.696035 TGTGTTATGCTAAATCATTTAAGTGCG 59.304 33.333 0.00 0.00 0.00 5.34
2811 2861 4.037327 TGGCTTTGTCGATTTGTTTCATCA 59.963 37.500 0.00 0.00 0.00 3.07
2819 2869 6.088824 GTCGATTTGTTTCATCAAGAATGCT 58.911 36.000 0.00 0.00 35.83 3.79
2821 2871 6.072563 TCGATTTGTTTCATCAAGAATGCTCA 60.073 34.615 0.00 0.00 35.83 4.26
2838 2888 7.386848 AGAATGCTCAAAAATTTGATGTCCTTG 59.613 33.333 8.88 0.00 45.26 3.61
2859 2909 7.831690 TCCTTGTGGTATGCAAATCTGTATTAA 59.168 33.333 0.00 0.00 34.23 1.40
2915 2965 2.722094 TGTGAGGTGGGTTTATGATGC 58.278 47.619 0.00 0.00 0.00 3.91
2917 2967 2.945668 GTGAGGTGGGTTTATGATGCTC 59.054 50.000 0.00 0.00 0.00 4.26
2931 2981 2.431782 TGATGCTCGATGACTTGGATGA 59.568 45.455 0.00 0.00 0.00 2.92
2932 2982 3.118665 TGATGCTCGATGACTTGGATGAA 60.119 43.478 0.00 0.00 0.00 2.57
2933 2983 2.621338 TGCTCGATGACTTGGATGAAC 58.379 47.619 0.00 0.00 0.00 3.18
2934 2984 2.028203 TGCTCGATGACTTGGATGAACA 60.028 45.455 0.00 0.00 0.00 3.18
2935 2985 2.606725 GCTCGATGACTTGGATGAACAG 59.393 50.000 0.00 0.00 0.00 3.16
2936 2986 2.606725 CTCGATGACTTGGATGAACAGC 59.393 50.000 0.00 0.00 0.00 4.40
2937 2987 2.234661 TCGATGACTTGGATGAACAGCT 59.765 45.455 0.00 0.00 0.00 4.24
2938 2988 3.447229 TCGATGACTTGGATGAACAGCTA 59.553 43.478 0.00 0.00 0.00 3.32
2939 2989 4.081697 TCGATGACTTGGATGAACAGCTAA 60.082 41.667 0.00 0.00 0.00 3.09
2940 2990 4.631377 CGATGACTTGGATGAACAGCTAAA 59.369 41.667 0.00 0.00 0.00 1.85
2941 2991 5.122239 CGATGACTTGGATGAACAGCTAAAA 59.878 40.000 0.00 0.00 0.00 1.52
2942 2992 5.689383 TGACTTGGATGAACAGCTAAAAC 57.311 39.130 0.00 0.00 0.00 2.43
2943 2993 5.129634 TGACTTGGATGAACAGCTAAAACA 58.870 37.500 0.00 0.00 0.00 2.83
2944 2994 5.769662 TGACTTGGATGAACAGCTAAAACAT 59.230 36.000 0.00 0.00 0.00 2.71
2945 2995 6.939730 TGACTTGGATGAACAGCTAAAACATA 59.060 34.615 0.00 0.00 0.00 2.29
2959 3009 9.066892 CAGCTAAAACATATTCTTATTAGGCCA 57.933 33.333 5.01 0.00 0.00 5.36
2980 3030 7.121315 AGGCCATTTCTGTTTTCTATCAGTAAC 59.879 37.037 5.01 0.00 33.89 2.50
3040 3090 0.252881 TTGTGGCATCCTCTCCCTCT 60.253 55.000 0.00 0.00 0.00 3.69
3041 3091 0.689080 TGTGGCATCCTCTCCCTCTC 60.689 60.000 0.00 0.00 0.00 3.20
3045 3135 0.975887 GCATCCTCTCCCTCTCCATC 59.024 60.000 0.00 0.00 0.00 3.51
3063 3153 3.004629 CCATCTGTGCACTTGCTGTTAAA 59.995 43.478 19.41 0.00 42.66 1.52
3082 3172 8.324163 TGTTAAATTCCTAGCTTTCTCTGTTC 57.676 34.615 0.00 0.00 0.00 3.18
3085 3175 4.442375 TTCCTAGCTTTCTCTGTTCGAG 57.558 45.455 0.00 0.00 41.30 4.04
3094 3184 3.560902 TCTCTGTTCGAGACACACATC 57.439 47.619 0.00 0.00 43.72 3.06
3142 3232 6.561519 ACATAGTCTAAGGCACCTTGTTAT 57.438 37.500 12.29 2.49 37.47 1.89
3151 3241 5.373812 AGGCACCTTGTTATATGTTAGCT 57.626 39.130 0.00 0.00 0.00 3.32
3207 3298 5.242434 TGTGTGCCTAAACTCATCGTATTT 58.758 37.500 0.00 0.00 0.00 1.40
3212 3303 6.480320 GTGCCTAAACTCATCGTATTTCTGAT 59.520 38.462 0.00 0.00 0.00 2.90
3220 3311 7.151308 ACTCATCGTATTTCTGATCTGGAATC 58.849 38.462 9.25 2.32 0.00 2.52
3240 3331 6.351286 GGAATCATAAGTGAAAACAGCCCAAT 60.351 38.462 0.00 0.00 38.01 3.16
3250 3341 6.987404 GTGAAAACAGCCCAATAAAAAGGTTA 59.013 34.615 0.00 0.00 0.00 2.85
3261 3354 8.024146 CCAATAAAAAGGTTAATTGGGTTTCG 57.976 34.615 5.25 0.00 35.99 3.46
3262 3355 7.360522 CCAATAAAAAGGTTAATTGGGTTTCGC 60.361 37.037 5.25 0.00 35.99 4.70
3269 3362 4.561105 GTTAATTGGGTTTCGCATCCAAA 58.439 39.130 3.53 0.00 42.86 3.28
3271 3364 3.979101 ATTGGGTTTCGCATCCAAATT 57.021 38.095 3.53 0.00 42.86 1.82
3272 3365 5.413309 AATTGGGTTTCGCATCCAAATTA 57.587 34.783 3.53 0.00 42.86 1.40
3273 3366 3.859411 TGGGTTTCGCATCCAAATTAC 57.141 42.857 0.00 0.00 0.00 1.89
3274 3367 3.426615 TGGGTTTCGCATCCAAATTACT 58.573 40.909 0.00 0.00 0.00 2.24
3275 3368 3.442273 TGGGTTTCGCATCCAAATTACTC 59.558 43.478 0.00 0.00 0.00 2.59
3276 3369 3.181490 GGGTTTCGCATCCAAATTACTCC 60.181 47.826 0.00 0.00 0.00 3.85
3277 3370 3.181490 GGTTTCGCATCCAAATTACTCCC 60.181 47.826 0.00 0.00 0.00 4.30
3278 3371 3.644966 TTCGCATCCAAATTACTCCCT 57.355 42.857 0.00 0.00 0.00 4.20
3279 3372 3.194005 TCGCATCCAAATTACTCCCTC 57.806 47.619 0.00 0.00 0.00 4.30
3280 3373 2.771943 TCGCATCCAAATTACTCCCTCT 59.228 45.455 0.00 0.00 0.00 3.69
3281 3374 2.874701 CGCATCCAAATTACTCCCTCTG 59.125 50.000 0.00 0.00 0.00 3.35
3282 3375 2.620585 GCATCCAAATTACTCCCTCTGC 59.379 50.000 0.00 0.00 0.00 4.26
3283 3376 3.889815 CATCCAAATTACTCCCTCTGCA 58.110 45.455 0.00 0.00 0.00 4.41
3284 3377 4.272489 CATCCAAATTACTCCCTCTGCAA 58.728 43.478 0.00 0.00 0.00 4.08
3285 3378 3.955471 TCCAAATTACTCCCTCTGCAAG 58.045 45.455 0.00 0.00 0.00 4.01
3286 3379 3.019564 CCAAATTACTCCCTCTGCAAGG 58.980 50.000 7.69 7.69 45.77 3.61
3298 3391 4.954092 CTCTGCAAGGAAATACAAGGTC 57.046 45.455 0.00 0.00 0.00 3.85
3299 3392 3.334691 TCTGCAAGGAAATACAAGGTCG 58.665 45.455 0.00 0.00 0.00 4.79
3300 3393 3.074412 CTGCAAGGAAATACAAGGTCGT 58.926 45.455 0.00 0.00 0.00 4.34
3301 3394 3.482436 TGCAAGGAAATACAAGGTCGTT 58.518 40.909 0.00 0.00 0.00 3.85
3302 3395 3.886505 TGCAAGGAAATACAAGGTCGTTT 59.113 39.130 0.00 0.00 0.00 3.60
3303 3396 5.064558 TGCAAGGAAATACAAGGTCGTTTA 58.935 37.500 0.00 0.00 0.00 2.01
3304 3397 5.180492 TGCAAGGAAATACAAGGTCGTTTAG 59.820 40.000 0.00 0.00 0.00 1.85
3305 3398 5.410439 GCAAGGAAATACAAGGTCGTTTAGA 59.590 40.000 0.00 0.00 0.00 2.10
3306 3399 6.093633 GCAAGGAAATACAAGGTCGTTTAGAT 59.906 38.462 0.00 0.00 0.00 1.98
3307 3400 7.676572 GCAAGGAAATACAAGGTCGTTTAGATC 60.677 40.741 0.00 0.00 0.00 2.75
3308 3401 6.942976 AGGAAATACAAGGTCGTTTAGATCA 58.057 36.000 0.00 0.00 30.60 2.92
3309 3402 7.391620 AGGAAATACAAGGTCGTTTAGATCAA 58.608 34.615 0.00 0.00 30.60 2.57
3310 3403 7.549488 AGGAAATACAAGGTCGTTTAGATCAAG 59.451 37.037 0.00 0.00 30.60 3.02
3311 3404 7.333672 GGAAATACAAGGTCGTTTAGATCAAGT 59.666 37.037 0.00 0.00 30.60 3.16
3312 3405 7.596749 AATACAAGGTCGTTTAGATCAAGTG 57.403 36.000 0.00 0.00 30.60 3.16
3313 3406 5.209818 ACAAGGTCGTTTAGATCAAGTGA 57.790 39.130 0.00 0.00 30.60 3.41
3314 3407 5.794894 ACAAGGTCGTTTAGATCAAGTGAT 58.205 37.500 0.00 0.00 37.51 3.06
3339 3432 9.778741 ATCTAAACGATCTTATATTTCCTTGCA 57.221 29.630 0.00 0.00 0.00 4.08
3340 3433 9.261180 TCTAAACGATCTTATATTTCCTTGCAG 57.739 33.333 0.00 0.00 0.00 4.41
3341 3434 9.261180 CTAAACGATCTTATATTTCCTTGCAGA 57.739 33.333 0.00 0.00 0.00 4.26
3342 3435 7.721286 AACGATCTTATATTTCCTTGCAGAG 57.279 36.000 0.00 0.00 0.00 3.35
3344 3437 5.641209 CGATCTTATATTTCCTTGCAGAGGG 59.359 44.000 12.99 5.78 46.31 4.30
3345 3438 6.519043 CGATCTTATATTTCCTTGCAGAGGGA 60.519 42.308 12.99 7.79 46.31 4.20
3346 3439 6.179906 TCTTATATTTCCTTGCAGAGGGAG 57.820 41.667 12.99 0.00 46.31 4.30
3375 3468 7.549839 CATTCTGTCAAATGGTATTCATGGTT 58.450 34.615 0.00 0.00 35.99 3.67
3387 3480 5.177327 GGTATTCATGGTTGTTGCAAAAGTG 59.823 40.000 0.00 0.00 0.00 3.16
3399 3492 2.137523 GCAAAAGTGCCTGTCAAATGG 58.862 47.619 0.00 0.00 45.68 3.16
3400 3493 2.483538 GCAAAAGTGCCTGTCAAATGGT 60.484 45.455 0.00 0.00 45.68 3.55
3401 3494 3.243704 GCAAAAGTGCCTGTCAAATGGTA 60.244 43.478 0.00 0.00 45.68 3.25
3402 3495 4.561326 GCAAAAGTGCCTGTCAAATGGTAT 60.561 41.667 0.00 0.00 45.68 2.73
3403 3496 5.163513 CAAAAGTGCCTGTCAAATGGTATC 58.836 41.667 0.00 0.00 0.00 2.24
3404 3497 3.004752 AGTGCCTGTCAAATGGTATCC 57.995 47.619 0.00 0.00 0.00 2.59
3405 3498 2.308570 AGTGCCTGTCAAATGGTATCCA 59.691 45.455 0.00 0.00 38.19 3.41
3407 3500 3.067180 GTGCCTGTCAAATGGTATCCATG 59.933 47.826 1.86 0.00 44.40 3.66
3408 3501 2.624838 GCCTGTCAAATGGTATCCATGG 59.375 50.000 4.97 4.97 44.40 3.66
3409 3502 3.902218 CCTGTCAAATGGTATCCATGGT 58.098 45.455 12.58 1.59 44.40 3.55
3410 3503 4.280819 CCTGTCAAATGGTATCCATGGTT 58.719 43.478 12.58 6.02 44.40 3.67
3411 3504 4.098349 CCTGTCAAATGGTATCCATGGTTG 59.902 45.833 12.58 7.14 44.40 3.77
3412 3505 4.671831 TGTCAAATGGTATCCATGGTTGT 58.328 39.130 12.58 1.89 44.40 3.32
3413 3506 5.083122 TGTCAAATGGTATCCATGGTTGTT 58.917 37.500 12.58 0.00 44.40 2.83
3414 3507 5.047448 TGTCAAATGGTATCCATGGTTGTTG 60.047 40.000 12.58 7.94 44.40 3.33
3415 3508 4.081752 TCAAATGGTATCCATGGTTGTTGC 60.082 41.667 12.58 0.00 44.40 4.17
3416 3509 2.593925 TGGTATCCATGGTTGTTGCA 57.406 45.000 12.58 0.00 0.00 4.08
3417 3510 2.881734 TGGTATCCATGGTTGTTGCAA 58.118 42.857 12.58 0.00 0.00 4.08
3418 3511 3.234353 TGGTATCCATGGTTGTTGCAAA 58.766 40.909 12.58 0.00 0.00 3.68
3419 3512 3.643320 TGGTATCCATGGTTGTTGCAAAA 59.357 39.130 12.58 0.00 0.00 2.44
3420 3513 4.244862 GGTATCCATGGTTGTTGCAAAAG 58.755 43.478 12.58 0.00 0.00 2.27
3421 3514 4.262420 GGTATCCATGGTTGTTGCAAAAGT 60.262 41.667 12.58 0.00 0.00 2.66
3422 3515 3.176552 TCCATGGTTGTTGCAAAAGTG 57.823 42.857 12.58 0.00 0.00 3.16
3435 3528 1.882623 CAAAAGTGCTCCAGAGTTCCC 59.117 52.381 0.00 0.00 0.00 3.97
3436 3529 1.439543 AAAGTGCTCCAGAGTTCCCT 58.560 50.000 0.00 0.00 0.00 4.20
3437 3530 1.439543 AAGTGCTCCAGAGTTCCCTT 58.560 50.000 0.00 0.00 0.00 3.95
3438 3531 0.689623 AGTGCTCCAGAGTTCCCTTG 59.310 55.000 0.00 0.00 0.00 3.61
3439 3532 0.957888 GTGCTCCAGAGTTCCCTTGC 60.958 60.000 0.00 0.00 0.00 4.01
3440 3533 1.743252 GCTCCAGAGTTCCCTTGCG 60.743 63.158 0.00 0.00 0.00 4.85
3441 3534 1.975327 CTCCAGAGTTCCCTTGCGA 59.025 57.895 0.00 0.00 0.00 5.10
3442 3535 0.321671 CTCCAGAGTTCCCTTGCGAA 59.678 55.000 0.00 0.00 0.00 4.70
3443 3536 0.762418 TCCAGAGTTCCCTTGCGAAA 59.238 50.000 0.00 0.00 0.00 3.46
3444 3537 1.351017 TCCAGAGTTCCCTTGCGAAAT 59.649 47.619 0.00 0.00 0.00 2.17
3445 3538 1.740025 CCAGAGTTCCCTTGCGAAATC 59.260 52.381 0.00 0.00 37.17 2.17
3446 3539 2.616510 CCAGAGTTCCCTTGCGAAATCT 60.617 50.000 0.00 0.00 45.40 2.40
3447 3540 2.704572 AGAGTTCCCTTGCGAAATCTG 58.295 47.619 0.93 0.00 43.49 2.90
3448 3541 1.740025 GAGTTCCCTTGCGAAATCTGG 59.260 52.381 0.00 0.00 34.75 3.86
3449 3542 1.351017 AGTTCCCTTGCGAAATCTGGA 59.649 47.619 0.00 0.00 0.00 3.86
3450 3543 1.740025 GTTCCCTTGCGAAATCTGGAG 59.260 52.381 0.00 0.00 0.00 3.86
3451 3544 0.392998 TCCCTTGCGAAATCTGGAGC 60.393 55.000 0.00 0.00 0.00 4.70
3452 3545 0.393537 CCCTTGCGAAATCTGGAGCT 60.394 55.000 0.00 0.00 0.00 4.09
3453 3546 1.012841 CCTTGCGAAATCTGGAGCTC 58.987 55.000 4.71 4.71 0.00 4.09
3454 3547 1.406614 CCTTGCGAAATCTGGAGCTCT 60.407 52.381 14.64 0.00 0.00 4.09
3455 3548 2.354259 CTTGCGAAATCTGGAGCTCTT 58.646 47.619 14.64 0.00 0.00 2.85
3456 3549 2.015736 TGCGAAATCTGGAGCTCTTC 57.984 50.000 14.64 8.08 0.00 2.87
3457 3550 1.294857 GCGAAATCTGGAGCTCTTCC 58.705 55.000 14.64 0.00 46.98 3.46
3467 3560 2.832563 GGAGCTCTTCCAATCTGTAGC 58.167 52.381 14.64 0.00 46.01 3.58
3468 3561 2.484594 GGAGCTCTTCCAATCTGTAGCC 60.485 54.545 14.64 0.00 46.01 3.93
3469 3562 1.137872 AGCTCTTCCAATCTGTAGCCG 59.862 52.381 0.00 0.00 0.00 5.52
3470 3563 1.808133 GCTCTTCCAATCTGTAGCCGG 60.808 57.143 0.00 0.00 0.00 6.13
3471 3564 1.757118 CTCTTCCAATCTGTAGCCGGA 59.243 52.381 5.05 0.00 0.00 5.14
3472 3565 1.480954 TCTTCCAATCTGTAGCCGGAC 59.519 52.381 5.05 0.00 0.00 4.79
3473 3566 1.207089 CTTCCAATCTGTAGCCGGACA 59.793 52.381 5.05 0.00 0.00 4.02
3474 3567 0.535335 TCCAATCTGTAGCCGGACAC 59.465 55.000 5.05 1.36 0.00 3.67
3475 3568 0.537188 CCAATCTGTAGCCGGACACT 59.463 55.000 5.05 0.00 0.00 3.55
3476 3569 1.754803 CCAATCTGTAGCCGGACACTA 59.245 52.381 5.05 0.00 0.00 2.74
3477 3570 2.167693 CCAATCTGTAGCCGGACACTAA 59.832 50.000 5.05 0.00 0.00 2.24
3478 3571 3.181465 CCAATCTGTAGCCGGACACTAAT 60.181 47.826 5.05 0.00 0.00 1.73
3479 3572 3.735237 ATCTGTAGCCGGACACTAATG 57.265 47.619 5.05 0.00 0.00 1.90
3480 3573 2.730382 TCTGTAGCCGGACACTAATGA 58.270 47.619 5.05 0.00 0.00 2.57
3481 3574 2.426024 TCTGTAGCCGGACACTAATGAC 59.574 50.000 5.05 0.00 0.00 3.06
3482 3575 2.427453 CTGTAGCCGGACACTAATGACT 59.573 50.000 5.05 0.00 0.00 3.41
3483 3576 2.165641 TGTAGCCGGACACTAATGACTG 59.834 50.000 5.05 0.00 0.00 3.51
3484 3577 0.108138 AGCCGGACACTAATGACTGC 60.108 55.000 5.05 0.00 0.00 4.40
3485 3578 0.391130 GCCGGACACTAATGACTGCA 60.391 55.000 5.05 0.00 0.00 4.41
3486 3579 1.943968 GCCGGACACTAATGACTGCAA 60.944 52.381 5.05 0.00 0.00 4.08
3487 3580 2.632377 CCGGACACTAATGACTGCAAT 58.368 47.619 0.00 0.00 0.00 3.56
3488 3581 3.009723 CCGGACACTAATGACTGCAATT 58.990 45.455 0.00 0.00 0.00 2.32
3489 3582 3.440173 CCGGACACTAATGACTGCAATTT 59.560 43.478 0.00 0.00 0.00 1.82
3490 3583 4.082787 CCGGACACTAATGACTGCAATTTT 60.083 41.667 0.00 0.00 0.00 1.82
3491 3584 5.460646 CGGACACTAATGACTGCAATTTTT 58.539 37.500 0.00 0.00 0.00 1.94
3492 3585 6.348950 CCGGACACTAATGACTGCAATTTTTA 60.349 38.462 0.00 0.00 0.00 1.52
3493 3586 7.250569 CGGACACTAATGACTGCAATTTTTAT 58.749 34.615 0.00 0.00 0.00 1.40
3494 3587 7.429340 CGGACACTAATGACTGCAATTTTTATC 59.571 37.037 0.00 0.00 0.00 1.75
3495 3588 8.243426 GGACACTAATGACTGCAATTTTTATCA 58.757 33.333 0.00 0.00 0.00 2.15
3496 3589 9.793252 GACACTAATGACTGCAATTTTTATCAT 57.207 29.630 0.00 0.00 0.00 2.45
3497 3590 9.577110 ACACTAATGACTGCAATTTTTATCATG 57.423 29.630 0.00 0.00 0.00 3.07
3498 3591 9.027129 CACTAATGACTGCAATTTTTATCATGG 57.973 33.333 0.00 0.00 0.00 3.66
3499 3592 8.199449 ACTAATGACTGCAATTTTTATCATGGG 58.801 33.333 0.00 0.00 0.00 4.00
3500 3593 5.999205 TGACTGCAATTTTTATCATGGGT 57.001 34.783 0.00 0.00 0.00 4.51
3501 3594 6.357579 TGACTGCAATTTTTATCATGGGTT 57.642 33.333 0.00 0.00 0.00 4.11
3502 3595 6.767456 TGACTGCAATTTTTATCATGGGTTT 58.233 32.000 0.00 0.00 0.00 3.27
3503 3596 7.222872 TGACTGCAATTTTTATCATGGGTTTT 58.777 30.769 0.00 0.00 0.00 2.43
3504 3597 8.370940 TGACTGCAATTTTTATCATGGGTTTTA 58.629 29.630 0.00 0.00 0.00 1.52
3505 3598 8.546597 ACTGCAATTTTTATCATGGGTTTTAC 57.453 30.769 0.00 0.00 0.00 2.01
3506 3599 8.153550 ACTGCAATTTTTATCATGGGTTTTACA 58.846 29.630 0.00 0.00 0.00 2.41
3507 3600 8.316640 TGCAATTTTTATCATGGGTTTTACAC 57.683 30.769 0.00 0.00 0.00 2.90
3508 3601 7.933577 TGCAATTTTTATCATGGGTTTTACACA 59.066 29.630 0.00 0.00 35.08 3.72
3509 3602 8.442384 GCAATTTTTATCATGGGTTTTACACAG 58.558 33.333 0.00 0.00 33.44 3.66
3510 3603 9.487790 CAATTTTTATCATGGGTTTTACACAGT 57.512 29.630 0.00 0.00 33.44 3.55
3512 3605 8.879342 TTTTTATCATGGGTTTTACACAGTTG 57.121 30.769 0.00 0.00 33.44 3.16
3513 3606 7.589958 TTTATCATGGGTTTTACACAGTTGT 57.410 32.000 0.00 0.00 33.44 3.32
3514 3607 7.589958 TTATCATGGGTTTTACACAGTTGTT 57.410 32.000 0.00 0.00 33.44 2.83
3515 3608 8.693120 TTATCATGGGTTTTACACAGTTGTTA 57.307 30.769 0.00 0.00 33.44 2.41
3516 3609 7.589958 ATCATGGGTTTTACACAGTTGTTAA 57.410 32.000 0.00 0.00 33.44 2.01
3517 3610 7.033530 TCATGGGTTTTACACAGTTGTTAAG 57.966 36.000 0.00 0.00 33.44 1.85
3518 3611 6.603997 TCATGGGTTTTACACAGTTGTTAAGT 59.396 34.615 0.00 0.00 33.44 2.24
3519 3612 7.774157 TCATGGGTTTTACACAGTTGTTAAGTA 59.226 33.333 0.00 0.00 33.44 2.24
3520 3613 7.319142 TGGGTTTTACACAGTTGTTAAGTAC 57.681 36.000 0.00 0.00 37.15 2.73
3521 3614 6.036953 TGGGTTTTACACAGTTGTTAAGTACG 59.963 38.462 0.00 0.00 37.15 3.67
3522 3615 6.421405 GGTTTTACACAGTTGTTAAGTACGG 58.579 40.000 0.00 0.00 37.15 4.02
3523 3616 6.037062 GGTTTTACACAGTTGTTAAGTACGGT 59.963 38.462 0.00 0.00 37.15 4.83
3524 3617 7.223777 GGTTTTACACAGTTGTTAAGTACGGTA 59.776 37.037 0.00 0.00 37.15 4.02
3525 3618 8.764287 GTTTTACACAGTTGTTAAGTACGGTAT 58.236 33.333 0.00 0.00 37.15 2.73
3526 3619 7.872163 TTACACAGTTGTTAAGTACGGTATG 57.128 36.000 0.00 0.00 37.15 2.39
3527 3620 5.232463 ACACAGTTGTTAAGTACGGTATGG 58.768 41.667 0.00 0.00 28.43 2.74
3528 3621 5.221501 ACACAGTTGTTAAGTACGGTATGGT 60.222 40.000 0.00 0.00 28.43 3.55
3529 3622 5.697633 CACAGTTGTTAAGTACGGTATGGTT 59.302 40.000 0.00 0.00 0.00 3.67
3530 3623 6.203338 CACAGTTGTTAAGTACGGTATGGTTT 59.797 38.462 0.00 0.00 0.00 3.27
3531 3624 6.203338 ACAGTTGTTAAGTACGGTATGGTTTG 59.797 38.462 0.00 0.00 0.00 2.93
3532 3625 6.203338 CAGTTGTTAAGTACGGTATGGTTTGT 59.797 38.462 0.00 0.00 0.00 2.83
3533 3626 6.203338 AGTTGTTAAGTACGGTATGGTTTGTG 59.797 38.462 0.00 0.00 0.00 3.33
3534 3627 4.996122 TGTTAAGTACGGTATGGTTTGTGG 59.004 41.667 0.00 0.00 0.00 4.17
3535 3628 5.221601 TGTTAAGTACGGTATGGTTTGTGGA 60.222 40.000 0.00 0.00 0.00 4.02
3536 3629 4.563140 AAGTACGGTATGGTTTGTGGAT 57.437 40.909 0.00 0.00 0.00 3.41
3537 3630 3.869065 AGTACGGTATGGTTTGTGGATG 58.131 45.455 0.00 0.00 0.00 3.51
3538 3631 1.459450 ACGGTATGGTTTGTGGATGC 58.541 50.000 0.00 0.00 0.00 3.91
3539 3632 0.738389 CGGTATGGTTTGTGGATGCC 59.262 55.000 0.00 0.00 0.00 4.40
3540 3633 1.111277 GGTATGGTTTGTGGATGCCC 58.889 55.000 0.00 0.00 0.00 5.36
3541 3634 1.341976 GGTATGGTTTGTGGATGCCCT 60.342 52.381 0.00 0.00 0.00 5.19
3542 3635 2.456577 GTATGGTTTGTGGATGCCCTT 58.543 47.619 0.00 0.00 0.00 3.95
3543 3636 1.560505 ATGGTTTGTGGATGCCCTTC 58.439 50.000 0.00 0.00 0.00 3.46
3544 3637 0.187117 TGGTTTGTGGATGCCCTTCA 59.813 50.000 0.00 0.00 0.00 3.02
3545 3638 1.203162 TGGTTTGTGGATGCCCTTCAT 60.203 47.619 0.00 0.00 38.32 2.57
3546 3639 1.205417 GGTTTGTGGATGCCCTTCATG 59.795 52.381 0.00 0.00 35.05 3.07
3547 3640 0.896923 TTTGTGGATGCCCTTCATGC 59.103 50.000 0.00 0.00 43.01 4.06
3551 3644 2.892025 GGATGCCCTTCATGCAACT 58.108 52.632 0.00 0.00 42.92 3.16
3552 3645 1.188863 GGATGCCCTTCATGCAACTT 58.811 50.000 0.00 0.00 42.92 2.66
3553 3646 1.551883 GGATGCCCTTCATGCAACTTT 59.448 47.619 0.00 0.00 42.92 2.66
3554 3647 2.417787 GGATGCCCTTCATGCAACTTTC 60.418 50.000 0.00 0.00 42.92 2.62
3555 3648 1.999648 TGCCCTTCATGCAACTTTCT 58.000 45.000 0.00 0.00 35.40 2.52
3556 3649 1.888512 TGCCCTTCATGCAACTTTCTC 59.111 47.619 0.00 0.00 35.40 2.87
3557 3650 2.165998 GCCCTTCATGCAACTTTCTCT 58.834 47.619 0.00 0.00 0.00 3.10
3558 3651 2.094854 GCCCTTCATGCAACTTTCTCTG 60.095 50.000 0.00 0.00 0.00 3.35
3559 3652 3.415212 CCCTTCATGCAACTTTCTCTGA 58.585 45.455 0.00 0.00 0.00 3.27
3560 3653 4.015084 CCCTTCATGCAACTTTCTCTGAT 58.985 43.478 0.00 0.00 0.00 2.90
3561 3654 4.461781 CCCTTCATGCAACTTTCTCTGATT 59.538 41.667 0.00 0.00 0.00 2.57
3562 3655 5.649395 CCCTTCATGCAACTTTCTCTGATTA 59.351 40.000 0.00 0.00 0.00 1.75
3563 3656 6.183360 CCCTTCATGCAACTTTCTCTGATTAG 60.183 42.308 0.00 0.00 0.00 1.73
3564 3657 6.373774 CCTTCATGCAACTTTCTCTGATTAGT 59.626 38.462 0.00 0.00 0.00 2.24
3565 3658 6.732531 TCATGCAACTTTCTCTGATTAGTG 57.267 37.500 0.00 0.00 0.00 2.74
3566 3659 6.466812 TCATGCAACTTTCTCTGATTAGTGA 58.533 36.000 0.00 0.00 0.00 3.41
3567 3660 6.936335 TCATGCAACTTTCTCTGATTAGTGAA 59.064 34.615 0.00 0.00 35.33 3.18
3568 3661 6.791887 TGCAACTTTCTCTGATTAGTGAAG 57.208 37.500 2.75 0.67 37.62 3.02
3569 3662 6.291377 TGCAACTTTCTCTGATTAGTGAAGT 58.709 36.000 2.75 1.18 37.62 3.01
3570 3663 6.203530 TGCAACTTTCTCTGATTAGTGAAGTG 59.796 38.462 2.75 4.57 37.62 3.16
3571 3664 6.597614 CAACTTTCTCTGATTAGTGAAGTGC 58.402 40.000 2.75 0.00 37.62 4.40
3572 3665 5.241662 ACTTTCTCTGATTAGTGAAGTGCC 58.758 41.667 2.75 0.00 37.62 5.01
3573 3666 4.890158 TTCTCTGATTAGTGAAGTGCCA 57.110 40.909 0.00 0.00 32.98 4.92
3574 3667 4.193826 TCTCTGATTAGTGAAGTGCCAC 57.806 45.455 0.00 0.00 37.32 5.01
3575 3668 3.578282 TCTCTGATTAGTGAAGTGCCACA 59.422 43.478 0.00 0.00 39.42 4.17
3576 3669 3.930336 TCTGATTAGTGAAGTGCCACAG 58.070 45.455 0.00 0.00 39.42 3.66
3577 3670 3.324846 TCTGATTAGTGAAGTGCCACAGT 59.675 43.478 0.00 0.00 39.42 3.55
3578 3671 3.664107 TGATTAGTGAAGTGCCACAGTC 58.336 45.455 0.00 0.00 39.42 3.51
3579 3672 2.543777 TTAGTGAAGTGCCACAGTCC 57.456 50.000 0.00 0.00 39.42 3.85
3580 3673 1.717032 TAGTGAAGTGCCACAGTCCT 58.283 50.000 0.00 0.00 39.42 3.85
3581 3674 0.107456 AGTGAAGTGCCACAGTCCTG 59.893 55.000 0.00 0.00 39.42 3.86
3582 3675 1.227943 TGAAGTGCCACAGTCCTGC 60.228 57.895 0.00 0.00 0.00 4.85
3583 3676 2.281070 AAGTGCCACAGTCCTGCG 60.281 61.111 0.00 0.00 0.00 5.18
3584 3677 3.832237 AAGTGCCACAGTCCTGCGG 62.832 63.158 0.00 0.00 35.94 5.69
3589 3682 4.007644 CACAGTCCTGCGGCCTGA 62.008 66.667 15.12 0.00 0.00 3.86
3590 3683 3.005539 ACAGTCCTGCGGCCTGAT 61.006 61.111 15.12 0.46 0.00 2.90
3591 3684 2.270205 CAGTCCTGCGGCCTGATT 59.730 61.111 0.00 0.00 0.00 2.57
3592 3685 2.110967 CAGTCCTGCGGCCTGATTG 61.111 63.158 0.00 0.00 0.00 2.67
3593 3686 2.268920 GTCCTGCGGCCTGATTGA 59.731 61.111 0.00 0.00 0.00 2.57
3594 3687 1.377202 GTCCTGCGGCCTGATTGAA 60.377 57.895 0.00 0.00 0.00 2.69
3595 3688 0.960364 GTCCTGCGGCCTGATTGAAA 60.960 55.000 0.00 0.00 0.00 2.69
3596 3689 0.034186 TCCTGCGGCCTGATTGAAAT 60.034 50.000 0.00 0.00 0.00 2.17
3597 3690 0.101759 CCTGCGGCCTGATTGAAATG 59.898 55.000 0.00 0.00 0.00 2.32
3598 3691 0.101759 CTGCGGCCTGATTGAAATGG 59.898 55.000 0.00 0.00 0.00 3.16
3599 3692 0.323269 TGCGGCCTGATTGAAATGGA 60.323 50.000 0.00 0.00 0.00 3.41
3600 3693 1.035139 GCGGCCTGATTGAAATGGAT 58.965 50.000 0.00 0.00 0.00 3.41
3601 3694 2.229792 GCGGCCTGATTGAAATGGATA 58.770 47.619 0.00 0.00 0.00 2.59
3602 3695 2.622942 GCGGCCTGATTGAAATGGATAA 59.377 45.455 0.00 0.00 0.00 1.75
3603 3696 3.550842 GCGGCCTGATTGAAATGGATAAC 60.551 47.826 0.00 0.00 0.00 1.89
3604 3697 3.631686 CGGCCTGATTGAAATGGATAACA 59.368 43.478 0.00 0.00 0.00 2.41
3605 3698 4.097741 CGGCCTGATTGAAATGGATAACAA 59.902 41.667 0.00 0.00 0.00 2.83
3606 3699 5.594926 GGCCTGATTGAAATGGATAACAAG 58.405 41.667 0.00 0.00 0.00 3.16
3607 3700 5.045872 GCCTGATTGAAATGGATAACAAGC 58.954 41.667 0.00 0.00 0.00 4.01
3608 3701 5.594926 CCTGATTGAAATGGATAACAAGCC 58.405 41.667 0.00 0.00 0.00 4.35
3609 3702 5.247507 TGATTGAAATGGATAACAAGCCG 57.752 39.130 0.00 0.00 0.00 5.52
3610 3703 4.704540 TGATTGAAATGGATAACAAGCCGT 59.295 37.500 0.00 0.00 0.00 5.68
3611 3704 4.433186 TTGAAATGGATAACAAGCCGTG 57.567 40.909 0.00 0.00 0.00 4.94
3612 3705 2.752354 TGAAATGGATAACAAGCCGTGG 59.248 45.455 0.00 0.00 0.00 4.94
3613 3706 2.799126 AATGGATAACAAGCCGTGGA 57.201 45.000 0.00 0.00 0.00 4.02
3614 3707 2.038387 ATGGATAACAAGCCGTGGAC 57.962 50.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.038042 CGCCCGTCCATGTCTATCATATAT 59.962 45.833 0.00 0.00 34.67 0.86
9 10 2.166459 CGCCCGTCCATGTCTATCATAT 59.834 50.000 0.00 0.00 34.67 1.78
31 32 0.251297 CAACCACCTTGGATGAGCCA 60.251 55.000 0.00 0.00 42.23 4.75
33 34 0.883833 CACAACCACCTTGGATGAGC 59.116 55.000 9.27 0.00 42.23 4.26
90 91 2.569218 TAGAGGACGAGGGAGGCCAC 62.569 65.000 5.01 0.00 0.00 5.01
109 110 4.415150 CATGCCCCAGTGCGAGGT 62.415 66.667 0.00 0.00 0.00 3.85
125 126 4.228567 TGTTGTGGACGCGAGGCA 62.229 61.111 15.93 2.89 45.40 4.75
133 134 1.647084 GAGGCGTTGTGTTGTGGAC 59.353 57.895 0.00 0.00 0.00 4.02
142 143 2.023414 TTGTGGAGTCGAGGCGTTGT 62.023 55.000 0.00 0.00 0.00 3.32
147 148 2.432628 CCGTTGTGGAGTCGAGGC 60.433 66.667 0.00 0.00 42.00 4.70
159 160 2.430244 CTCACGACCCGTCCGTTG 60.430 66.667 0.00 0.00 38.32 4.10
165 166 2.203596 ACTTCCCTCACGACCCGT 60.204 61.111 0.00 0.00 42.36 5.28
182 183 2.014857 CGAGTCGGAGGTCAATAGTGA 58.985 52.381 4.10 0.00 0.00 3.41
214 215 2.668185 AATCGTGCGGTGTTCCCACA 62.668 55.000 0.00 0.00 43.71 4.17
227 228 2.398554 CGCAACCCCTCCAATCGTG 61.399 63.158 0.00 0.00 0.00 4.35
230 231 3.140814 GCCGCAACCCCTCCAATC 61.141 66.667 0.00 0.00 0.00 2.67
281 282 2.456119 GGCTCGAGGCACGTGAATG 61.456 63.158 31.94 5.42 44.01 2.67
282 283 2.125512 GGCTCGAGGCACGTGAAT 60.126 61.111 31.94 6.13 44.01 2.57
302 303 3.133767 CTTGGATCCGCCGACGCTA 62.134 63.158 7.39 0.00 40.66 4.26
312 313 0.383231 CTCAAATGGCGCTTGGATCC 59.617 55.000 7.64 4.20 0.00 3.36
313 314 1.332997 CTCTCAAATGGCGCTTGGATC 59.667 52.381 7.64 0.00 0.00 3.36
322 323 2.115291 GCCCGACCTCTCAAATGGC 61.115 63.158 0.00 0.00 0.00 4.40
359 360 1.480212 TTGTCCACATGGCTCTCCGT 61.480 55.000 0.00 0.00 34.14 4.69
377 378 0.544357 TGGTCGGTGAGGAGATGGTT 60.544 55.000 0.00 0.00 0.00 3.67
381 382 2.711922 GCGTGGTCGGTGAGGAGAT 61.712 63.158 0.00 0.00 37.56 2.75
389 390 4.309950 GTCCCTTGCGTGGTCGGT 62.310 66.667 0.00 0.00 37.56 4.69
390 391 3.818121 TTGTCCCTTGCGTGGTCGG 62.818 63.158 0.00 0.00 37.56 4.79
391 392 2.280524 TTGTCCCTTGCGTGGTCG 60.281 61.111 0.00 0.00 40.37 4.79
392 393 1.070786 TCTTGTCCCTTGCGTGGTC 59.929 57.895 0.00 0.00 0.00 4.02
393 394 1.227853 GTCTTGTCCCTTGCGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
394 395 1.966451 GGTCTTGTCCCTTGCGTGG 60.966 63.158 0.00 0.00 0.00 4.94
410 411 0.833287 CTCGATCCATCAACTGGGGT 59.167 55.000 0.00 0.00 45.98 4.95
413 414 4.574550 AGATCCCTCGATCCATCAACTGG 61.575 52.174 0.00 0.00 45.32 4.00
414 415 2.632028 AGATCCCTCGATCCATCAACTG 59.368 50.000 0.00 0.00 45.32 3.16
428 429 2.286365 GATCTGACTCCGAGATCCCT 57.714 55.000 1.33 0.00 39.96 4.20
465 466 2.202453 GCGAACTCCGACCGTCTC 60.202 66.667 0.00 0.00 41.76 3.36
481 482 2.751837 CCCAAGCTCCTTTCCGGC 60.752 66.667 0.00 0.00 0.00 6.13
487 488 1.673767 TCTTCATCCCCAAGCTCCTT 58.326 50.000 0.00 0.00 0.00 3.36
506 507 0.319728 CTCCATTCCGCTCCGATCAT 59.680 55.000 0.00 0.00 0.00 2.45
507 508 1.043116 ACTCCATTCCGCTCCGATCA 61.043 55.000 0.00 0.00 0.00 2.92
511 512 1.519455 GTCACTCCATTCCGCTCCG 60.519 63.158 0.00 0.00 0.00 4.63
516 517 1.486211 ACCCTAGTCACTCCATTCCG 58.514 55.000 0.00 0.00 0.00 4.30
531 532 1.299976 GCACTCCGGATCAAACCCT 59.700 57.895 3.57 0.00 0.00 4.34
560 561 7.232737 TGACTCACTACGATCCCACATATATTT 59.767 37.037 0.00 0.00 0.00 1.40
573 574 2.623889 GCCTACCATGACTCACTACGAT 59.376 50.000 0.00 0.00 0.00 3.73
577 578 2.024369 TCAGGCCTACCATGACTCACTA 60.024 50.000 3.98 0.00 39.06 2.74
582 583 1.428869 GGATCAGGCCTACCATGACT 58.571 55.000 3.98 0.00 39.06 3.41
585 586 0.034059 GTCGGATCAGGCCTACCATG 59.966 60.000 3.98 0.00 39.06 3.66
591 592 2.362503 TCACGTCGGATCAGGCCT 60.363 61.111 0.00 0.00 0.00 5.19
605 606 0.038251 TGCTCAGATGTGTCCGTCAC 60.038 55.000 0.00 1.77 46.31 3.67
614 615 4.298103 ACTGGAAAGAATGCTCAGATGT 57.702 40.909 0.00 0.00 0.00 3.06
633 634 4.471386 ACCTCTTGTATGCAGTCCATAACT 59.529 41.667 0.00 0.00 38.11 2.24
634 635 4.572389 CACCTCTTGTATGCAGTCCATAAC 59.428 45.833 0.00 0.00 38.11 1.89
636 637 3.432186 GCACCTCTTGTATGCAGTCCATA 60.432 47.826 0.00 0.00 39.23 2.74
637 638 2.681976 GCACCTCTTGTATGCAGTCCAT 60.682 50.000 0.00 0.00 39.23 3.41
638 639 1.339055 GCACCTCTTGTATGCAGTCCA 60.339 52.381 0.00 0.00 39.23 4.02
639 640 1.373570 GCACCTCTTGTATGCAGTCC 58.626 55.000 0.00 0.00 39.23 3.85
640 641 1.373570 GGCACCTCTTGTATGCAGTC 58.626 55.000 0.00 0.00 41.27 3.51
644 653 1.078426 ACCGGCACCTCTTGTATGC 60.078 57.895 0.00 0.00 38.68 3.14
649 658 2.743928 GCTGACCGGCACCTCTTG 60.744 66.667 0.00 0.00 0.00 3.02
650 659 4.021925 GGCTGACCGGCACCTCTT 62.022 66.667 0.00 0.00 38.25 2.85
737 746 4.099380 GAACTCTTCGTGAAGGTCCTAG 57.901 50.000 9.58 2.39 38.88 3.02
754 763 2.846371 GAGCATCTGCAACCGAACT 58.154 52.632 4.79 0.00 45.16 3.01
766 775 7.748241 GTGAAGACACTTTGAATTAAGAGCATC 59.252 37.037 0.00 0.00 42.99 3.91
767 776 7.571983 CGTGAAGACACTTTGAATTAAGAGCAT 60.572 37.037 0.00 0.00 43.99 3.79
768 777 6.292865 CGTGAAGACACTTTGAATTAAGAGCA 60.293 38.462 0.00 0.00 43.99 4.26
769 778 6.073765 TCGTGAAGACACTTTGAATTAAGAGC 60.074 38.462 0.00 0.00 43.99 4.09
770 779 7.408132 TCGTGAAGACACTTTGAATTAAGAG 57.592 36.000 0.00 0.00 43.99 2.85
771 780 7.709182 TCTTCGTGAAGACACTTTGAATTAAGA 59.291 33.333 8.19 0.00 42.06 2.10
772 781 7.851508 TCTTCGTGAAGACACTTTGAATTAAG 58.148 34.615 8.19 0.00 42.06 1.85
773 782 7.494625 ACTCTTCGTGAAGACACTTTGAATTAA 59.505 33.333 8.19 0.00 42.06 1.40
774 783 6.984474 ACTCTTCGTGAAGACACTTTGAATTA 59.016 34.615 8.19 0.00 42.06 1.40
775 784 5.817816 ACTCTTCGTGAAGACACTTTGAATT 59.182 36.000 8.19 0.00 42.06 2.17
776 785 5.360591 ACTCTTCGTGAAGACACTTTGAAT 58.639 37.500 8.19 0.00 42.06 2.57
777 786 4.755411 ACTCTTCGTGAAGACACTTTGAA 58.245 39.130 8.19 0.00 42.06 2.69
778 787 4.386867 ACTCTTCGTGAAGACACTTTGA 57.613 40.909 8.19 0.00 42.06 2.69
779 788 5.071955 GAACTCTTCGTGAAGACACTTTG 57.928 43.478 8.19 1.21 42.06 2.77
792 801 4.358914 GCATCTGCAACCGAACTCTTCG 62.359 54.545 0.00 0.00 45.87 3.79
827 836 7.565680 ACCACAAATAAGAGTCCCTATACAAG 58.434 38.462 0.00 0.00 0.00 3.16
836 846 6.567891 CGGAAGAAAACCACAAATAAGAGTCC 60.568 42.308 0.00 0.00 0.00 3.85
900 911 9.163899 ACGTTTATTTATTTTCTCCTCTCCTTC 57.836 33.333 0.00 0.00 0.00 3.46
930 949 4.114058 AGCTATTCGTAAGCGTACCAAA 57.886 40.909 4.14 0.04 44.87 3.28
943 965 4.883083 TCTGTTATTGGGCTAGCTATTCG 58.117 43.478 15.72 0.00 0.00 3.34
950 976 4.499183 GATCGGATCTGTTATTGGGCTAG 58.501 47.826 10.73 0.00 0.00 3.42
1360 1389 1.671379 GGTGAACCACTCGAAGGCC 60.671 63.158 0.00 0.00 34.40 5.19
1711 1740 1.028868 GCCAGATGTTCTCCAGGTGC 61.029 60.000 0.00 0.00 0.00 5.01
2041 2070 0.687354 CCACAAGGTAGCTGTCCACT 59.313 55.000 11.41 0.00 0.00 4.00
2191 2220 2.375146 TCATTCATCAGCTGCTGCAAT 58.625 42.857 24.38 17.47 42.74 3.56
2241 2270 0.234625 GAGCGCGTTGAACACATCAA 59.765 50.000 8.43 0.00 45.71 2.57
2397 2426 1.617018 CCATCCTGAGCCTCGACCAA 61.617 60.000 0.00 0.00 0.00 3.67
2493 2522 3.683989 CATGACGGAAATCAAACCATCG 58.316 45.455 0.00 0.00 30.82 3.84
2508 2537 0.378257 GGGCAACATACAGCATGACG 59.622 55.000 0.00 0.00 38.10 4.35
2534 2563 4.471904 ACAAAAGAGCTATGACGGATCA 57.528 40.909 0.00 0.00 39.83 2.92
2535 2564 5.803020 AAACAAAAGAGCTATGACGGATC 57.197 39.130 0.00 0.00 0.00 3.36
2601 2630 4.305989 TCCAGTCTCATTTGCAAAACAC 57.694 40.909 17.19 10.07 0.00 3.32
2604 2633 7.523293 TCTAATTCCAGTCTCATTTGCAAAA 57.477 32.000 17.19 0.00 0.00 2.44
2680 2713 5.289193 CCATCATAAAATGCTTTGAACCGTG 59.711 40.000 0.00 0.00 0.00 4.94
2682 2715 4.268405 GCCATCATAAAATGCTTTGAACCG 59.732 41.667 0.00 0.00 0.00 4.44
2755 2790 2.032799 CCTCAAAACACAAGCGCACTTA 59.967 45.455 11.47 0.00 33.74 2.24
2760 2795 2.766970 TAACCTCAAAACACAAGCGC 57.233 45.000 0.00 0.00 0.00 5.92
2762 2797 8.512138 ACATAGTTATAACCTCAAAACACAAGC 58.488 33.333 12.05 0.00 0.00 4.01
2819 2869 6.232581 ACCACAAGGACATCAAATTTTTGA 57.767 33.333 8.09 8.09 43.92 2.69
2821 2871 6.650390 GCATACCACAAGGACATCAAATTTTT 59.350 34.615 0.00 0.00 38.69 1.94
2838 2888 9.801873 AACAATTAATACAGATTTGCATACCAC 57.198 29.630 0.00 0.00 0.00 4.16
2896 2946 2.945668 GAGCATCATAAACCCACCTCAC 59.054 50.000 0.00 0.00 33.17 3.51
2915 2965 2.606725 GCTGTTCATCCAAGTCATCGAG 59.393 50.000 0.00 0.00 0.00 4.04
2917 2967 2.625737 AGCTGTTCATCCAAGTCATCG 58.374 47.619 0.00 0.00 0.00 3.84
2932 2982 9.067986 GGCCTAATAAGAATATGTTTTAGCTGT 57.932 33.333 0.00 0.00 0.00 4.40
2933 2983 9.066892 TGGCCTAATAAGAATATGTTTTAGCTG 57.933 33.333 3.32 0.00 0.00 4.24
2934 2984 9.813826 ATGGCCTAATAAGAATATGTTTTAGCT 57.186 29.630 3.32 0.00 0.00 3.32
2940 2990 9.646522 ACAGAAATGGCCTAATAAGAATATGTT 57.353 29.630 3.32 0.00 0.00 2.71
2941 2991 9.646522 AACAGAAATGGCCTAATAAGAATATGT 57.353 29.630 3.32 0.00 0.00 2.29
2945 2995 9.259832 AGAAAACAGAAATGGCCTAATAAGAAT 57.740 29.630 3.32 0.00 0.00 2.40
2959 3009 9.878599 CAAACGTTACTGATAGAAAACAGAAAT 57.121 29.630 0.00 0.00 37.54 2.17
2963 3013 7.069569 CACCAAACGTTACTGATAGAAAACAG 58.930 38.462 0.00 0.00 39.65 3.16
2964 3014 6.512091 GCACCAAACGTTACTGATAGAAAACA 60.512 38.462 0.00 0.00 0.00 2.83
2965 3015 5.849604 GCACCAAACGTTACTGATAGAAAAC 59.150 40.000 0.00 0.00 0.00 2.43
2970 3020 4.629634 TGATGCACCAAACGTTACTGATAG 59.370 41.667 0.00 0.00 0.00 2.08
3005 3055 2.361757 CCACAAGATTGACAAAGTGGCA 59.638 45.455 15.11 0.00 39.89 4.92
3009 3059 3.256631 GGATGCCACAAGATTGACAAAGT 59.743 43.478 0.00 0.00 0.00 2.66
3040 3090 0.109153 ACAGCAAGTGCACAGATGGA 59.891 50.000 24.71 0.00 45.16 3.41
3041 3091 0.956633 AACAGCAAGTGCACAGATGG 59.043 50.000 24.71 12.69 45.16 3.51
3045 3135 3.983344 GGAATTTAACAGCAAGTGCACAG 59.017 43.478 21.04 12.34 45.16 3.66
3082 3172 2.551355 AGATGACGATGTGTGTCTCG 57.449 50.000 0.00 0.00 40.62 4.04
3085 3175 3.067106 ACCAAAGATGACGATGTGTGTC 58.933 45.455 0.00 0.00 36.88 3.67
3091 3181 4.872124 TCAGAATGACCAAAGATGACGATG 59.128 41.667 0.00 0.00 42.56 3.84
3092 3182 5.089970 TCAGAATGACCAAAGATGACGAT 57.910 39.130 0.00 0.00 42.56 3.73
3093 3183 4.535526 TCAGAATGACCAAAGATGACGA 57.464 40.909 0.00 0.00 42.56 4.20
3207 3298 8.102676 TGTTTTCACTTATGATTCCAGATCAGA 58.897 33.333 0.00 0.00 33.85 3.27
3212 3303 5.415701 GGCTGTTTTCACTTATGATTCCAGA 59.584 40.000 0.00 0.00 33.85 3.86
3220 3311 8.600449 TTTTTATTGGGCTGTTTTCACTTATG 57.400 30.769 0.00 0.00 0.00 1.90
3240 3331 6.158023 TGCGAAACCCAATTAACCTTTTTA 57.842 33.333 0.00 0.00 0.00 1.52
3250 3341 3.979101 ATTTGGATGCGAAACCCAATT 57.021 38.095 1.90 0.00 39.43 2.32
3256 3347 3.694566 AGGGAGTAATTTGGATGCGAAAC 59.305 43.478 0.00 0.00 0.00 2.78
3261 3354 2.620585 GCAGAGGGAGTAATTTGGATGC 59.379 50.000 0.00 0.00 0.00 3.91
3262 3355 3.889815 TGCAGAGGGAGTAATTTGGATG 58.110 45.455 0.00 0.00 0.00 3.51
3269 3362 4.870021 ATTTCCTTGCAGAGGGAGTAAT 57.130 40.909 12.99 6.05 46.31 1.89
3271 3364 4.101114 TGTATTTCCTTGCAGAGGGAGTA 58.899 43.478 12.99 5.17 46.31 2.59
3272 3365 2.912956 TGTATTTCCTTGCAGAGGGAGT 59.087 45.455 12.99 5.97 46.31 3.85
3273 3366 3.634397 TGTATTTCCTTGCAGAGGGAG 57.366 47.619 12.99 0.00 46.31 4.30
3274 3367 3.308402 CCTTGTATTTCCTTGCAGAGGGA 60.308 47.826 12.99 7.79 46.31 4.20
3275 3368 3.019564 CCTTGTATTTCCTTGCAGAGGG 58.980 50.000 12.99 5.78 46.31 4.30
3277 3370 3.372206 CGACCTTGTATTTCCTTGCAGAG 59.628 47.826 0.00 0.00 0.00 3.35
3278 3371 3.244422 ACGACCTTGTATTTCCTTGCAGA 60.244 43.478 0.00 0.00 0.00 4.26
3279 3372 3.074412 ACGACCTTGTATTTCCTTGCAG 58.926 45.455 0.00 0.00 0.00 4.41
3280 3373 3.134574 ACGACCTTGTATTTCCTTGCA 57.865 42.857 0.00 0.00 0.00 4.08
3281 3374 4.499037 AAACGACCTTGTATTTCCTTGC 57.501 40.909 0.00 0.00 0.00 4.01
3282 3375 7.333423 TGATCTAAACGACCTTGTATTTCCTTG 59.667 37.037 0.00 0.00 0.00 3.61
3283 3376 7.391620 TGATCTAAACGACCTTGTATTTCCTT 58.608 34.615 0.00 0.00 0.00 3.36
3284 3377 6.942976 TGATCTAAACGACCTTGTATTTCCT 58.057 36.000 0.00 0.00 0.00 3.36
3285 3378 7.333672 ACTTGATCTAAACGACCTTGTATTTCC 59.666 37.037 0.00 0.00 0.00 3.13
3286 3379 8.169268 CACTTGATCTAAACGACCTTGTATTTC 58.831 37.037 0.00 0.00 0.00 2.17
3287 3380 7.876068 TCACTTGATCTAAACGACCTTGTATTT 59.124 33.333 0.00 0.00 0.00 1.40
3288 3381 7.383687 TCACTTGATCTAAACGACCTTGTATT 58.616 34.615 0.00 0.00 0.00 1.89
3289 3382 6.931838 TCACTTGATCTAAACGACCTTGTAT 58.068 36.000 0.00 0.00 0.00 2.29
3290 3383 6.335471 TCACTTGATCTAAACGACCTTGTA 57.665 37.500 0.00 0.00 0.00 2.41
3291 3384 5.209818 TCACTTGATCTAAACGACCTTGT 57.790 39.130 0.00 0.00 0.00 3.16
3292 3385 6.337853 GATCACTTGATCTAAACGACCTTG 57.662 41.667 11.33 0.00 45.60 3.61
3313 3406 9.778741 TGCAAGGAAATATAAGATCGTTTAGAT 57.221 29.630 0.00 0.00 43.51 1.98
3314 3407 9.261180 CTGCAAGGAAATATAAGATCGTTTAGA 57.739 33.333 0.00 0.00 0.00 2.10
3315 3408 9.261180 TCTGCAAGGAAATATAAGATCGTTTAG 57.739 33.333 0.00 0.00 0.00 1.85
3316 3409 9.261180 CTCTGCAAGGAAATATAAGATCGTTTA 57.739 33.333 0.00 0.00 0.00 2.01
3317 3410 8.147642 CTCTGCAAGGAAATATAAGATCGTTT 57.852 34.615 0.00 0.00 0.00 3.60
3318 3411 7.721286 CTCTGCAAGGAAATATAAGATCGTT 57.279 36.000 0.00 0.00 0.00 3.85
3333 3426 1.207791 ATGGTACTCCCTCTGCAAGG 58.792 55.000 7.69 7.69 45.77 3.61
3334 3427 2.503356 AGAATGGTACTCCCTCTGCAAG 59.497 50.000 0.00 0.00 0.00 4.01
3335 3428 2.237143 CAGAATGGTACTCCCTCTGCAA 59.763 50.000 0.00 0.00 36.54 4.08
3336 3429 1.833630 CAGAATGGTACTCCCTCTGCA 59.166 52.381 0.00 0.00 36.54 4.41
3337 3430 1.834263 ACAGAATGGTACTCCCTCTGC 59.166 52.381 11.94 0.00 43.62 4.26
3338 3431 3.099905 TGACAGAATGGTACTCCCTCTG 58.900 50.000 10.99 10.99 43.62 3.35
3339 3432 3.474798 TGACAGAATGGTACTCCCTCT 57.525 47.619 0.00 0.00 43.62 3.69
3340 3433 4.553330 TTTGACAGAATGGTACTCCCTC 57.447 45.455 0.00 0.00 43.62 4.30
3341 3434 4.848357 CATTTGACAGAATGGTACTCCCT 58.152 43.478 0.00 0.00 43.62 4.20
3387 3480 2.624838 CCATGGATACCATTTGACAGGC 59.375 50.000 5.56 0.00 42.23 4.85
3390 3483 4.671831 ACAACCATGGATACCATTTGACA 58.328 39.130 21.47 0.00 42.23 3.58
3391 3484 5.410067 CAACAACCATGGATACCATTTGAC 58.590 41.667 21.47 0.00 42.23 3.18
3392 3485 4.081752 GCAACAACCATGGATACCATTTGA 60.082 41.667 21.47 0.00 42.23 2.69
3393 3486 4.183101 GCAACAACCATGGATACCATTTG 58.817 43.478 21.47 12.97 42.23 2.32
3394 3487 3.837146 TGCAACAACCATGGATACCATTT 59.163 39.130 21.47 0.00 42.23 2.32
3395 3488 3.439154 TGCAACAACCATGGATACCATT 58.561 40.909 21.47 0.00 42.23 3.16
3396 3489 3.098774 TGCAACAACCATGGATACCAT 57.901 42.857 21.47 0.00 46.37 3.55
3397 3490 2.593925 TGCAACAACCATGGATACCA 57.406 45.000 21.47 4.64 38.19 3.25
3398 3491 3.951775 TTTGCAACAACCATGGATACC 57.048 42.857 21.47 1.86 0.00 2.73
3399 3492 4.685628 CACTTTTGCAACAACCATGGATAC 59.314 41.667 21.47 1.85 0.00 2.24
3400 3493 4.880759 CACTTTTGCAACAACCATGGATA 58.119 39.130 21.47 0.00 0.00 2.59
3401 3494 3.731089 CACTTTTGCAACAACCATGGAT 58.269 40.909 21.47 2.68 0.00 3.41
3402 3495 3.176552 CACTTTTGCAACAACCATGGA 57.823 42.857 21.47 0.00 0.00 3.41
3415 3508 1.882623 GGGAACTCTGGAGCACTTTTG 59.117 52.381 0.00 0.00 0.00 2.44
3416 3509 1.777272 AGGGAACTCTGGAGCACTTTT 59.223 47.619 0.00 0.00 32.90 2.27
3417 3510 1.439543 AGGGAACTCTGGAGCACTTT 58.560 50.000 0.00 0.00 32.90 2.66
3418 3511 1.072965 CAAGGGAACTCTGGAGCACTT 59.927 52.381 0.00 0.00 42.68 3.16
3419 3512 0.689623 CAAGGGAACTCTGGAGCACT 59.310 55.000 0.00 0.00 42.68 4.40
3420 3513 0.957888 GCAAGGGAACTCTGGAGCAC 60.958 60.000 0.00 0.00 42.68 4.40
3421 3514 1.376466 GCAAGGGAACTCTGGAGCA 59.624 57.895 0.00 0.00 42.68 4.26
3422 3515 1.743252 CGCAAGGGAACTCTGGAGC 60.743 63.158 0.00 0.00 42.68 4.70
3423 3516 0.321671 TTCGCAAGGGAACTCTGGAG 59.678 55.000 0.00 0.00 42.68 3.86
3424 3517 0.762418 TTTCGCAAGGGAACTCTGGA 59.238 50.000 0.00 0.00 42.68 3.86
3425 3518 1.740025 GATTTCGCAAGGGAACTCTGG 59.260 52.381 9.09 0.00 42.68 3.86
3426 3519 2.417933 CAGATTTCGCAAGGGAACTCTG 59.582 50.000 22.91 22.91 43.01 3.35
3427 3520 2.616510 CCAGATTTCGCAAGGGAACTCT 60.617 50.000 12.01 12.01 42.68 3.24
3428 3521 1.740025 CCAGATTTCGCAAGGGAACTC 59.260 52.381 8.52 8.52 42.68 3.01
3430 3523 1.740025 CTCCAGATTTCGCAAGGGAAC 59.260 52.381 0.00 0.00 38.47 3.62
3431 3524 1.950484 GCTCCAGATTTCGCAAGGGAA 60.950 52.381 0.00 0.00 38.47 3.97
3432 3525 0.392998 GCTCCAGATTTCGCAAGGGA 60.393 55.000 0.00 0.00 38.47 4.20
3433 3526 0.393537 AGCTCCAGATTTCGCAAGGG 60.394 55.000 0.00 0.00 38.47 3.95
3434 3527 1.012841 GAGCTCCAGATTTCGCAAGG 58.987 55.000 0.87 0.00 38.47 3.61
3435 3528 2.021355 AGAGCTCCAGATTTCGCAAG 57.979 50.000 10.93 0.00 0.00 4.01
3436 3529 2.350522 GAAGAGCTCCAGATTTCGCAA 58.649 47.619 10.93 0.00 0.00 4.85
3437 3530 1.406069 GGAAGAGCTCCAGATTTCGCA 60.406 52.381 10.93 0.00 44.67 5.10
3438 3531 1.294857 GGAAGAGCTCCAGATTTCGC 58.705 55.000 10.93 0.00 44.67 4.70
3447 3540 2.484594 GGCTACAGATTGGAAGAGCTCC 60.485 54.545 10.93 0.00 45.64 4.70
3448 3541 2.801342 CGGCTACAGATTGGAAGAGCTC 60.801 54.545 5.27 5.27 0.00 4.09
3449 3542 1.137872 CGGCTACAGATTGGAAGAGCT 59.862 52.381 0.00 0.00 0.00 4.09
3450 3543 1.576356 CGGCTACAGATTGGAAGAGC 58.424 55.000 0.00 0.00 0.00 4.09
3451 3544 1.757118 TCCGGCTACAGATTGGAAGAG 59.243 52.381 0.00 0.00 0.00 2.85
3452 3545 1.480954 GTCCGGCTACAGATTGGAAGA 59.519 52.381 0.00 0.00 0.00 2.87
3453 3546 1.207089 TGTCCGGCTACAGATTGGAAG 59.793 52.381 0.00 0.00 0.00 3.46
3454 3547 1.066430 GTGTCCGGCTACAGATTGGAA 60.066 52.381 0.00 0.00 0.00 3.53
3455 3548 0.535335 GTGTCCGGCTACAGATTGGA 59.465 55.000 0.00 0.00 0.00 3.53
3456 3549 0.537188 AGTGTCCGGCTACAGATTGG 59.463 55.000 0.00 0.00 0.00 3.16
3457 3550 3.520290 TTAGTGTCCGGCTACAGATTG 57.480 47.619 0.00 0.00 0.00 2.67
3458 3551 3.704566 TCATTAGTGTCCGGCTACAGATT 59.295 43.478 0.00 0.00 0.00 2.40
3459 3552 3.068307 GTCATTAGTGTCCGGCTACAGAT 59.932 47.826 0.00 0.00 0.00 2.90
3460 3553 2.426024 GTCATTAGTGTCCGGCTACAGA 59.574 50.000 0.00 0.00 0.00 3.41
3461 3554 2.427453 AGTCATTAGTGTCCGGCTACAG 59.573 50.000 0.00 0.00 0.00 2.74
3462 3555 2.165641 CAGTCATTAGTGTCCGGCTACA 59.834 50.000 0.00 0.00 0.00 2.74
3463 3556 2.810650 CAGTCATTAGTGTCCGGCTAC 58.189 52.381 0.00 0.00 0.00 3.58
3464 3557 1.136305 GCAGTCATTAGTGTCCGGCTA 59.864 52.381 0.00 0.00 0.00 3.93
3465 3558 0.108138 GCAGTCATTAGTGTCCGGCT 60.108 55.000 0.00 0.00 0.00 5.52
3466 3559 0.391130 TGCAGTCATTAGTGTCCGGC 60.391 55.000 0.00 0.00 0.00 6.13
3467 3560 2.093306 TTGCAGTCATTAGTGTCCGG 57.907 50.000 0.00 0.00 0.00 5.14
3468 3561 4.685169 AAATTGCAGTCATTAGTGTCCG 57.315 40.909 0.00 0.00 0.00 4.79
3469 3562 8.243426 TGATAAAAATTGCAGTCATTAGTGTCC 58.757 33.333 0.00 0.00 0.00 4.02
3470 3563 9.793252 ATGATAAAAATTGCAGTCATTAGTGTC 57.207 29.630 0.00 0.00 0.00 3.67
3471 3564 9.577110 CATGATAAAAATTGCAGTCATTAGTGT 57.423 29.630 0.00 0.00 0.00 3.55
3472 3565 9.027129 CCATGATAAAAATTGCAGTCATTAGTG 57.973 33.333 0.00 0.00 0.00 2.74
3473 3566 8.199449 CCCATGATAAAAATTGCAGTCATTAGT 58.801 33.333 0.00 0.00 0.00 2.24
3474 3567 8.199449 ACCCATGATAAAAATTGCAGTCATTAG 58.801 33.333 0.00 0.00 0.00 1.73
3475 3568 8.076910 ACCCATGATAAAAATTGCAGTCATTA 57.923 30.769 0.00 0.00 0.00 1.90
3476 3569 6.949715 ACCCATGATAAAAATTGCAGTCATT 58.050 32.000 0.00 0.00 0.00 2.57
3477 3570 6.549433 ACCCATGATAAAAATTGCAGTCAT 57.451 33.333 0.00 0.00 0.00 3.06
3478 3571 5.999205 ACCCATGATAAAAATTGCAGTCA 57.001 34.783 0.00 0.00 0.00 3.41
3479 3572 7.671495 AAAACCCATGATAAAAATTGCAGTC 57.329 32.000 0.00 0.00 0.00 3.51
3480 3573 8.153550 TGTAAAACCCATGATAAAAATTGCAGT 58.846 29.630 0.00 0.00 0.00 4.40
3481 3574 8.442384 GTGTAAAACCCATGATAAAAATTGCAG 58.558 33.333 0.00 0.00 0.00 4.41
3482 3575 7.933577 TGTGTAAAACCCATGATAAAAATTGCA 59.066 29.630 0.00 0.00 0.00 4.08
3483 3576 8.316640 TGTGTAAAACCCATGATAAAAATTGC 57.683 30.769 0.00 0.00 0.00 3.56
3484 3577 9.487790 ACTGTGTAAAACCCATGATAAAAATTG 57.512 29.630 0.00 0.00 0.00 2.32
3486 3579 9.487790 CAACTGTGTAAAACCCATGATAAAAAT 57.512 29.630 0.00 0.00 0.00 1.82
3487 3580 8.478877 ACAACTGTGTAAAACCCATGATAAAAA 58.521 29.630 0.00 0.00 35.72 1.94
3488 3581 8.012957 ACAACTGTGTAAAACCCATGATAAAA 57.987 30.769 0.00 0.00 35.72 1.52
3489 3582 7.589958 ACAACTGTGTAAAACCCATGATAAA 57.410 32.000 0.00 0.00 35.72 1.40
3490 3583 7.589958 AACAACTGTGTAAAACCCATGATAA 57.410 32.000 0.00 0.00 36.80 1.75
3491 3584 8.693120 TTAACAACTGTGTAAAACCCATGATA 57.307 30.769 0.00 0.00 36.80 2.15
3492 3585 7.286775 ACTTAACAACTGTGTAAAACCCATGAT 59.713 33.333 0.00 0.00 36.80 2.45
3493 3586 6.603997 ACTTAACAACTGTGTAAAACCCATGA 59.396 34.615 0.00 0.00 36.80 3.07
3494 3587 6.801575 ACTTAACAACTGTGTAAAACCCATG 58.198 36.000 0.00 0.00 36.80 3.66
3495 3588 7.254863 CGTACTTAACAACTGTGTAAAACCCAT 60.255 37.037 0.00 0.00 36.80 4.00
3496 3589 6.036953 CGTACTTAACAACTGTGTAAAACCCA 59.963 38.462 0.00 0.00 36.80 4.51
3497 3590 6.421405 CGTACTTAACAACTGTGTAAAACCC 58.579 40.000 0.00 0.00 36.80 4.11
3498 3591 6.037062 ACCGTACTTAACAACTGTGTAAAACC 59.963 38.462 0.00 0.00 36.80 3.27
3499 3592 7.003939 ACCGTACTTAACAACTGTGTAAAAC 57.996 36.000 0.00 0.00 36.80 2.43
3500 3593 8.763356 CATACCGTACTTAACAACTGTGTAAAA 58.237 33.333 0.00 0.00 36.80 1.52
3501 3594 7.384660 CCATACCGTACTTAACAACTGTGTAAA 59.615 37.037 0.00 0.00 36.80 2.01
3502 3595 6.867816 CCATACCGTACTTAACAACTGTGTAA 59.132 38.462 0.00 0.00 36.80 2.41
3503 3596 6.015519 ACCATACCGTACTTAACAACTGTGTA 60.016 38.462 0.00 0.00 36.80 2.90
3504 3597 5.221501 ACCATACCGTACTTAACAACTGTGT 60.222 40.000 0.00 0.00 40.75 3.72
3505 3598 5.232463 ACCATACCGTACTTAACAACTGTG 58.768 41.667 0.00 0.00 0.00 3.66
3506 3599 5.473066 ACCATACCGTACTTAACAACTGT 57.527 39.130 0.00 0.00 0.00 3.55
3507 3600 6.203338 ACAAACCATACCGTACTTAACAACTG 59.797 38.462 0.00 0.00 0.00 3.16
3508 3601 6.203338 CACAAACCATACCGTACTTAACAACT 59.797 38.462 0.00 0.00 0.00 3.16
3509 3602 6.365050 CACAAACCATACCGTACTTAACAAC 58.635 40.000 0.00 0.00 0.00 3.32
3510 3603 5.469421 CCACAAACCATACCGTACTTAACAA 59.531 40.000 0.00 0.00 0.00 2.83
3511 3604 4.996122 CCACAAACCATACCGTACTTAACA 59.004 41.667 0.00 0.00 0.00 2.41
3512 3605 5.237048 TCCACAAACCATACCGTACTTAAC 58.763 41.667 0.00 0.00 0.00 2.01
3513 3606 5.480642 TCCACAAACCATACCGTACTTAA 57.519 39.130 0.00 0.00 0.00 1.85
3514 3607 5.421277 CATCCACAAACCATACCGTACTTA 58.579 41.667 0.00 0.00 0.00 2.24
3515 3608 4.258543 CATCCACAAACCATACCGTACTT 58.741 43.478 0.00 0.00 0.00 2.24
3516 3609 3.869065 CATCCACAAACCATACCGTACT 58.131 45.455 0.00 0.00 0.00 2.73
3517 3610 2.353579 GCATCCACAAACCATACCGTAC 59.646 50.000 0.00 0.00 0.00 3.67
3518 3611 2.634600 GCATCCACAAACCATACCGTA 58.365 47.619 0.00 0.00 0.00 4.02
3519 3612 1.459450 GCATCCACAAACCATACCGT 58.541 50.000 0.00 0.00 0.00 4.83
3520 3613 0.738389 GGCATCCACAAACCATACCG 59.262 55.000 0.00 0.00 0.00 4.02
3521 3614 1.111277 GGGCATCCACAAACCATACC 58.889 55.000 0.00 0.00 0.00 2.73
3522 3615 2.143876 AGGGCATCCACAAACCATAC 57.856 50.000 0.00 0.00 34.83 2.39
3523 3616 2.042297 TGAAGGGCATCCACAAACCATA 59.958 45.455 0.00 0.00 34.83 2.74
3524 3617 1.203162 TGAAGGGCATCCACAAACCAT 60.203 47.619 0.00 0.00 34.83 3.55
3525 3618 0.187117 TGAAGGGCATCCACAAACCA 59.813 50.000 0.00 0.00 34.83 3.67
3526 3619 1.205417 CATGAAGGGCATCCACAAACC 59.795 52.381 0.00 0.00 34.15 3.27
3527 3620 1.404583 GCATGAAGGGCATCCACAAAC 60.405 52.381 0.00 0.00 34.15 2.93
3528 3621 0.896923 GCATGAAGGGCATCCACAAA 59.103 50.000 0.00 0.00 34.15 2.83
3529 3622 0.251698 TGCATGAAGGGCATCCACAA 60.252 50.000 0.00 0.00 36.11 3.33
3530 3623 0.251698 TTGCATGAAGGGCATCCACA 60.252 50.000 0.00 0.00 41.58 4.17
3531 3624 0.174162 GTTGCATGAAGGGCATCCAC 59.826 55.000 0.00 0.00 41.58 4.02
3532 3625 0.040058 AGTTGCATGAAGGGCATCCA 59.960 50.000 0.00 0.00 41.58 3.41
3533 3626 1.188863 AAGTTGCATGAAGGGCATCC 58.811 50.000 0.00 0.00 41.58 3.51
3534 3627 2.494870 AGAAAGTTGCATGAAGGGCATC 59.505 45.455 0.00 0.00 41.58 3.91
3535 3628 2.494870 GAGAAAGTTGCATGAAGGGCAT 59.505 45.455 0.00 0.00 41.58 4.40
3536 3629 1.888512 GAGAAAGTTGCATGAAGGGCA 59.111 47.619 0.00 0.00 40.00 5.36
3537 3630 2.094854 CAGAGAAAGTTGCATGAAGGGC 60.095 50.000 0.00 0.00 0.00 5.19
3538 3631 3.415212 TCAGAGAAAGTTGCATGAAGGG 58.585 45.455 0.00 0.00 0.00 3.95
3539 3632 5.640189 AATCAGAGAAAGTTGCATGAAGG 57.360 39.130 0.00 0.00 0.00 3.46
3540 3633 7.118825 TCACTAATCAGAGAAAGTTGCATGAAG 59.881 37.037 0.00 0.00 0.00 3.02
3541 3634 6.936335 TCACTAATCAGAGAAAGTTGCATGAA 59.064 34.615 0.00 0.00 0.00 2.57
3542 3635 6.466812 TCACTAATCAGAGAAAGTTGCATGA 58.533 36.000 0.00 0.00 0.00 3.07
3543 3636 6.732531 TCACTAATCAGAGAAAGTTGCATG 57.267 37.500 0.00 0.00 0.00 4.06
3544 3637 6.939163 ACTTCACTAATCAGAGAAAGTTGCAT 59.061 34.615 0.00 0.00 32.01 3.96
3545 3638 6.203530 CACTTCACTAATCAGAGAAAGTTGCA 59.796 38.462 0.00 0.00 32.01 4.08
3546 3639 6.597614 CACTTCACTAATCAGAGAAAGTTGC 58.402 40.000 0.00 0.00 32.01 4.17
3547 3640 6.348050 GGCACTTCACTAATCAGAGAAAGTTG 60.348 42.308 0.00 0.00 32.01 3.16
3548 3641 5.703130 GGCACTTCACTAATCAGAGAAAGTT 59.297 40.000 0.00 0.00 32.01 2.66
3549 3642 5.221722 TGGCACTTCACTAATCAGAGAAAGT 60.222 40.000 0.00 0.00 32.01 2.66
3550 3643 5.121454 GTGGCACTTCACTAATCAGAGAAAG 59.879 44.000 11.13 0.00 32.01 2.62
3551 3644 4.997395 GTGGCACTTCACTAATCAGAGAAA 59.003 41.667 11.13 0.00 32.01 2.52
3552 3645 4.040339 TGTGGCACTTCACTAATCAGAGAA 59.960 41.667 19.83 0.00 38.40 2.87
3553 3646 3.578282 TGTGGCACTTCACTAATCAGAGA 59.422 43.478 19.83 0.00 38.40 3.10
3554 3647 3.930336 TGTGGCACTTCACTAATCAGAG 58.070 45.455 19.83 0.00 38.40 3.35
3555 3648 3.324846 ACTGTGGCACTTCACTAATCAGA 59.675 43.478 19.83 0.00 38.40 3.27
3556 3649 3.668447 ACTGTGGCACTTCACTAATCAG 58.332 45.455 19.83 6.05 38.40 2.90
3557 3650 3.557054 GGACTGTGGCACTTCACTAATCA 60.557 47.826 19.83 0.00 38.40 2.57
3558 3651 3.003480 GGACTGTGGCACTTCACTAATC 58.997 50.000 19.83 0.00 38.40 1.75
3559 3652 2.639839 AGGACTGTGGCACTTCACTAAT 59.360 45.455 19.83 0.00 38.40 1.73
3560 3653 2.047061 AGGACTGTGGCACTTCACTAA 58.953 47.619 19.83 0.00 38.40 2.24
3561 3654 1.344438 CAGGACTGTGGCACTTCACTA 59.656 52.381 19.83 0.00 38.40 2.74
3562 3655 0.107456 CAGGACTGTGGCACTTCACT 59.893 55.000 19.83 9.21 38.40 3.41
3563 3656 1.510480 GCAGGACTGTGGCACTTCAC 61.510 60.000 19.83 7.00 38.09 3.18
3564 3657 1.227943 GCAGGACTGTGGCACTTCA 60.228 57.895 19.83 0.00 0.00 3.02
3565 3658 2.320587 CGCAGGACTGTGGCACTTC 61.321 63.158 19.83 14.43 37.43 3.01
3566 3659 2.281070 CGCAGGACTGTGGCACTT 60.281 61.111 19.83 5.54 37.43 3.16
3579 3672 0.101759 CCATTTCAATCAGGCCGCAG 59.898 55.000 0.00 0.00 0.00 5.18
3580 3673 0.323269 TCCATTTCAATCAGGCCGCA 60.323 50.000 0.00 0.00 0.00 5.69
3581 3674 1.035139 ATCCATTTCAATCAGGCCGC 58.965 50.000 0.00 0.00 0.00 6.53
3582 3675 3.631686 TGTTATCCATTTCAATCAGGCCG 59.368 43.478 0.00 0.00 0.00 6.13
3583 3676 5.594926 CTTGTTATCCATTTCAATCAGGCC 58.405 41.667 0.00 0.00 0.00 5.19
3584 3677 5.045872 GCTTGTTATCCATTTCAATCAGGC 58.954 41.667 0.00 0.00 0.00 4.85
3585 3678 5.594926 GGCTTGTTATCCATTTCAATCAGG 58.405 41.667 0.00 0.00 0.00 3.86
3586 3679 5.163622 ACGGCTTGTTATCCATTTCAATCAG 60.164 40.000 0.00 0.00 0.00 2.90
3587 3680 4.704540 ACGGCTTGTTATCCATTTCAATCA 59.295 37.500 0.00 0.00 0.00 2.57
3588 3681 5.036737 CACGGCTTGTTATCCATTTCAATC 58.963 41.667 0.00 0.00 0.00 2.67
3589 3682 4.142182 CCACGGCTTGTTATCCATTTCAAT 60.142 41.667 0.00 0.00 0.00 2.57
3590 3683 3.192422 CCACGGCTTGTTATCCATTTCAA 59.808 43.478 0.00 0.00 0.00 2.69
3591 3684 2.752354 CCACGGCTTGTTATCCATTTCA 59.248 45.455 0.00 0.00 0.00 2.69
3592 3685 3.013921 TCCACGGCTTGTTATCCATTTC 58.986 45.455 0.00 0.00 0.00 2.17
3593 3686 2.752903 GTCCACGGCTTGTTATCCATTT 59.247 45.455 0.00 0.00 0.00 2.32
3594 3687 2.365582 GTCCACGGCTTGTTATCCATT 58.634 47.619 0.00 0.00 0.00 3.16
3595 3688 2.038387 GTCCACGGCTTGTTATCCAT 57.962 50.000 0.00 0.00 0.00 3.41
3596 3689 3.543884 GTCCACGGCTTGTTATCCA 57.456 52.632 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.