Multiple sequence alignment - TraesCS3B01G280700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G280700 chr3B 100.000 3438 0 0 1 3438 451362866 451359429 0.000000e+00 6349.0
1 TraesCS3B01G280700 chr3D 92.831 3557 106 53 1 3438 352369276 352365750 0.000000e+00 5018.0
2 TraesCS3B01G280700 chr3A 91.082 3521 147 61 1 3438 470831002 470827566 0.000000e+00 4608.0
3 TraesCS3B01G280700 chr2B 97.368 76 1 1 3362 3436 215840800 215840725 1.000000e-25 128.0
4 TraesCS3B01G280700 chr2B 89.286 84 9 0 1277 1360 152844306 152844223 4.690000e-19 106.0
5 TraesCS3B01G280700 chr2A 89.412 85 9 0 1277 1361 100826034 100825950 1.300000e-19 108.0
6 TraesCS3B01G280700 chr2D 88.235 85 10 0 1277 1361 101872833 101872749 6.070000e-18 102.0
7 TraesCS3B01G280700 chr4D 78.102 137 23 2 1253 1382 68053412 68053548 2.840000e-11 80.5
8 TraesCS3B01G280700 chr4B 78.102 137 23 2 1253 1382 100576661 100576797 2.840000e-11 80.5
9 TraesCS3B01G280700 chr4A 78.102 137 23 2 1253 1382 517884592 517884728 2.840000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G280700 chr3B 451359429 451362866 3437 True 6349 6349 100.000 1 3438 1 chr3B.!!$R1 3437
1 TraesCS3B01G280700 chr3D 352365750 352369276 3526 True 5018 5018 92.831 1 3438 1 chr3D.!!$R1 3437
2 TraesCS3B01G280700 chr3A 470827566 470831002 3436 True 4608 4608 91.082 1 3438 1 chr3A.!!$R1 3437

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.036105 AATGTGCATGTCCTCGAGCA 60.036 50.0 6.99 0.23 34.10 4.26 F
131 136 0.249398 GCCCTTTGCTCCTCGTCTTA 59.751 55.0 0.00 0.00 36.87 2.10 F
797 864 0.388649 GCCCGTGCTAGATGGATACG 60.389 60.0 0.00 0.00 34.40 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 2105 0.182537 CCGCCCCATCCAGAATGTTA 59.817 55.0 0.00 0.00 33.13 2.41 R
2413 2552 0.610232 GAACCCAGTGGAGCTGCATT 60.610 55.0 12.38 3.69 43.71 3.56 R
2963 3110 0.598065 GCGGGAGATGTTTTGCAGTT 59.402 50.0 0.00 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 99 0.036105 AATGTGCATGTCCTCGAGCA 60.036 50.000 6.99 0.23 34.10 4.26
131 136 0.249398 GCCCTTTGCTCCTCGTCTTA 59.751 55.000 0.00 0.00 36.87 2.10
132 137 1.338769 GCCCTTTGCTCCTCGTCTTAA 60.339 52.381 0.00 0.00 36.87 1.85
133 138 2.681097 GCCCTTTGCTCCTCGTCTTAAT 60.681 50.000 0.00 0.00 36.87 1.40
134 139 3.610911 CCCTTTGCTCCTCGTCTTAATT 58.389 45.455 0.00 0.00 0.00 1.40
167 172 4.996434 GCAGGGCGCACACAGAGT 62.996 66.667 14.57 0.00 41.79 3.24
185 190 2.432510 GAGTGATCCCAAATCTCGACCT 59.567 50.000 0.00 0.00 0.00 3.85
186 191 2.840651 AGTGATCCCAAATCTCGACCTT 59.159 45.455 0.00 0.00 0.00 3.50
241 246 3.302480 GGACGCGTTGCTTTCTGTATATG 60.302 47.826 15.53 0.00 0.00 1.78
272 299 2.346803 TGCAGTCGCAGAGGTAAATTC 58.653 47.619 0.00 0.00 45.36 2.17
279 306 3.000727 CGCAGAGGTAAATTCGTTTCCT 58.999 45.455 0.00 0.00 0.00 3.36
280 307 3.062234 CGCAGAGGTAAATTCGTTTCCTC 59.938 47.826 4.14 4.14 43.29 3.71
291 318 1.626321 TCGTTTCCTCAAGGGTGCATA 59.374 47.619 0.00 0.00 36.25 3.14
295 322 1.891933 TCCTCAAGGGTGCATATGGA 58.108 50.000 4.56 0.00 36.25 3.41
308 336 5.447279 GGTGCATATGGAACGTAAGAACAAG 60.447 44.000 4.56 0.00 43.62 3.16
327 355 7.709613 AGAACAAGACGCTAAAGAAGTAAAGAA 59.290 33.333 0.00 0.00 0.00 2.52
329 357 6.074463 ACAAGACGCTAAAGAAGTAAAGAACG 60.074 38.462 0.00 0.00 0.00 3.95
493 534 1.525306 GGGCAGTTATGGGCGTACC 60.525 63.158 0.00 0.00 40.81 3.34
641 708 1.227674 CTCTCATAACGCAGGGGGC 60.228 63.158 0.00 0.00 39.90 5.80
709 776 2.058595 ACGCCTCATCGCCTTAGGT 61.059 57.895 0.00 0.00 32.67 3.08
797 864 0.388649 GCCCGTGCTAGATGGATACG 60.389 60.000 0.00 0.00 34.40 3.06
800 867 1.880675 CCGTGCTAGATGGATACGAGT 59.119 52.381 0.00 0.00 42.51 4.18
801 868 3.072211 CCGTGCTAGATGGATACGAGTA 58.928 50.000 0.00 0.00 42.51 2.59
802 869 3.125487 CCGTGCTAGATGGATACGAGTAG 59.875 52.174 0.00 0.00 42.51 2.57
803 870 3.995048 CGTGCTAGATGGATACGAGTAGA 59.005 47.826 0.00 0.00 42.51 2.59
804 871 4.632251 CGTGCTAGATGGATACGAGTAGAT 59.368 45.833 0.00 0.00 42.51 1.98
835 903 1.188863 GGGCTCGACAGGTTTAGGTA 58.811 55.000 0.00 0.00 0.00 3.08
883 951 0.601311 GCCTGCCCTTAGATGTAGCG 60.601 60.000 0.00 0.00 0.00 4.26
896 964 2.478547 TGTAGCGATTGCATTGCATG 57.521 45.000 12.95 6.91 46.23 4.06
931 999 1.606531 GCCACATTGCCCTCTCTCT 59.393 57.895 0.00 0.00 0.00 3.10
932 1000 0.463474 GCCACATTGCCCTCTCTCTC 60.463 60.000 0.00 0.00 0.00 3.20
933 1001 1.202330 CCACATTGCCCTCTCTCTCT 58.798 55.000 0.00 0.00 0.00 3.10
934 1002 1.138661 CCACATTGCCCTCTCTCTCTC 59.861 57.143 0.00 0.00 0.00 3.20
959 1027 8.572185 TCTCTCATCTCATCTTCTTTATAACCG 58.428 37.037 0.00 0.00 0.00 4.44
1089 1195 2.264109 AGCTCGTCAAGTACATCACG 57.736 50.000 0.00 0.00 0.00 4.35
1125 1231 1.601171 CTGGAGCTCAGTCCCAAGG 59.399 63.158 17.19 0.00 38.64 3.61
1167 1279 1.730501 CGGATTCTCTGCTGCTTCAA 58.269 50.000 0.00 0.00 0.00 2.69
1233 1345 6.017687 TCTGCATTGCTGAATATGTATGTGTC 60.018 38.462 14.93 0.00 33.82 3.67
1251 1363 1.672363 GTCCATCTTCATTCATGCGCA 59.328 47.619 14.96 14.96 0.00 6.09
1422 1543 1.276705 TGAATGCATGCATGGTGCTTT 59.723 42.857 32.79 16.75 45.31 3.51
1450 1571 1.952296 CCCTACATGCAAATCAGCTCC 59.048 52.381 0.00 0.00 34.99 4.70
1480 1601 2.749621 GCTGTAACTTCATTCCCCTGTG 59.250 50.000 0.00 0.00 0.00 3.66
1482 1603 2.375174 TGTAACTTCATTCCCCTGTGCT 59.625 45.455 0.00 0.00 0.00 4.40
1483 1604 1.915141 AACTTCATTCCCCTGTGCTG 58.085 50.000 0.00 0.00 0.00 4.41
1484 1605 0.773644 ACTTCATTCCCCTGTGCTGT 59.226 50.000 0.00 0.00 0.00 4.40
1485 1606 1.171308 CTTCATTCCCCTGTGCTGTG 58.829 55.000 0.00 0.00 0.00 3.66
1486 1607 0.478072 TTCATTCCCCTGTGCTGTGT 59.522 50.000 0.00 0.00 0.00 3.72
1564 1689 4.726416 CAAAATCACATTAGCTTGCTCGT 58.274 39.130 0.00 0.00 0.00 4.18
1567 1692 2.337583 TCACATTAGCTTGCTCGTGAC 58.662 47.619 14.33 0.00 0.00 3.67
1618 1743 6.799512 ACAGATTGAGCTAATACCAAAATGC 58.200 36.000 0.00 0.00 0.00 3.56
1811 1936 7.873910 GGTAACTGGTAGTAGATCATGTACTC 58.126 42.308 0.00 0.00 32.81 2.59
1888 2017 8.331740 TCTTCCAAAAGAACCATCTAATCTGAT 58.668 33.333 0.00 0.00 38.58 2.90
2536 2680 6.536582 CCTAGCTGATGATGGAATAATTACCG 59.463 42.308 0.00 0.00 0.00 4.02
2561 2705 6.444633 CATGTACGTTTCCTAGGGTATACTG 58.555 44.000 9.46 0.00 0.00 2.74
2683 2827 7.708752 CCGAAGAAGAAACTTCTGATTAGCTAT 59.291 37.037 13.56 0.00 42.58 2.97
2786 2930 5.810587 CGGTGGGAATATATAGTGTATGCAC 59.189 44.000 5.71 5.71 45.57 4.57
2873 3017 8.553459 TCTTATGAGAGGATGTTTTTGAAGAC 57.447 34.615 0.00 0.00 0.00 3.01
2936 3080 2.393271 ATCTGTCAGGTGTAAGCAGC 57.607 50.000 0.00 0.00 42.96 5.25
2956 3103 6.016360 AGCAGCATAACAAATAAACAGTGTCA 60.016 34.615 0.00 0.00 0.00 3.58
2957 3104 6.640499 GCAGCATAACAAATAAACAGTGTCAA 59.360 34.615 0.00 0.00 0.00 3.18
2958 3105 7.148918 GCAGCATAACAAATAAACAGTGTCAAG 60.149 37.037 0.00 0.00 0.00 3.02
2959 3106 7.862372 CAGCATAACAAATAAACAGTGTCAAGT 59.138 33.333 0.00 0.00 0.00 3.16
2960 3107 7.862372 AGCATAACAAATAAACAGTGTCAAGTG 59.138 33.333 0.00 0.00 0.00 3.16
2961 3108 7.647715 GCATAACAAATAAACAGTGTCAAGTGT 59.352 33.333 0.00 0.00 41.94 3.55
2962 3109 9.169468 CATAACAAATAAACAGTGTCAAGTGTC 57.831 33.333 0.00 0.00 39.11 3.67
2963 3110 6.751514 ACAAATAAACAGTGTCAAGTGTCA 57.248 33.333 0.00 0.00 39.11 3.58
2981 3129 1.879380 TCAACTGCAAAACATCTCCCG 59.121 47.619 0.00 0.00 0.00 5.14
3090 3240 2.626780 GGCAGGCGTCTTGTTTCCC 61.627 63.158 0.00 0.00 0.00 3.97
3091 3241 1.896660 GCAGGCGTCTTGTTTCCCA 60.897 57.895 0.00 0.00 0.00 4.37
3223 3373 0.610232 GTCCTGCAAATGTCCCTGCT 60.610 55.000 0.00 0.00 39.38 4.24
3426 3580 1.262950 TGCACAACAGCAACGTATCAC 59.737 47.619 0.00 0.00 42.46 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 99 0.039326 AAGGGCTGCAAGAAGCTCAT 59.961 50.000 2.14 0.00 46.80 2.90
131 136 4.320870 CTGCCAATTGCCAAAGAGAAATT 58.679 39.130 0.00 0.00 40.16 1.82
132 137 3.307199 CCTGCCAATTGCCAAAGAGAAAT 60.307 43.478 0.00 0.00 40.16 2.17
133 138 2.037511 CCTGCCAATTGCCAAAGAGAAA 59.962 45.455 0.00 0.00 40.16 2.52
134 139 1.619827 CCTGCCAATTGCCAAAGAGAA 59.380 47.619 0.00 0.00 40.16 2.87
165 170 2.472029 AGGTCGAGATTTGGGATCACT 58.528 47.619 0.00 0.00 0.00 3.41
167 172 4.301072 AAAAGGTCGAGATTTGGGATCA 57.699 40.909 0.00 0.00 0.00 2.92
190 195 4.952071 TTCATTCATTCACCTTTGGCAA 57.048 36.364 0.00 0.00 0.00 4.52
199 204 1.841944 CGCGTGCATTCATTCATTCAC 59.158 47.619 0.00 0.00 0.00 3.18
223 228 5.712217 TGTACATATACAGAAAGCAACGC 57.288 39.130 0.00 0.00 36.34 4.84
225 230 8.717821 TCACTTTGTACATATACAGAAAGCAAC 58.282 33.333 0.00 0.00 42.29 4.17
241 246 2.510615 GCGACTGCATCACTTTGTAC 57.489 50.000 0.00 0.00 42.15 2.90
272 299 2.107950 TATGCACCCTTGAGGAAACG 57.892 50.000 0.00 0.00 39.89 3.60
279 306 1.280710 ACGTTCCATATGCACCCTTGA 59.719 47.619 0.00 0.00 0.00 3.02
280 307 1.750193 ACGTTCCATATGCACCCTTG 58.250 50.000 0.00 0.00 0.00 3.61
291 318 2.735134 GCGTCTTGTTCTTACGTTCCAT 59.265 45.455 0.00 0.00 38.81 3.41
295 322 5.284079 TCTTTAGCGTCTTGTTCTTACGTT 58.716 37.500 0.00 0.00 38.81 3.99
308 336 4.149396 TGCGTTCTTTACTTCTTTAGCGTC 59.851 41.667 0.00 0.00 0.00 5.19
327 355 7.210873 CCTATCCTTAAATAGTCTTTCTGCGT 58.789 38.462 0.00 0.00 0.00 5.24
329 357 6.428465 GCCCTATCCTTAAATAGTCTTTCTGC 59.572 42.308 0.00 0.00 0.00 4.26
453 490 3.589988 CGCTTTCTTCAGAGTACATGGT 58.410 45.455 0.00 0.00 0.00 3.55
493 534 1.973138 CAGAAATTTCACTGCCTGCG 58.027 50.000 19.99 0.00 0.00 5.18
641 708 0.458889 TTCGGTATTTCCACGCTCCG 60.459 55.000 0.00 0.00 39.40 4.63
653 720 2.497770 CGAGGGGCGTTTCGGTAT 59.502 61.111 0.00 0.00 33.39 2.73
709 776 1.074951 TGAGTGGCTCGAGTGAGGA 59.925 57.895 15.13 0.00 42.79 3.71
797 864 4.043686 AGCCCTACTCCTTCCTATCTACTC 59.956 50.000 0.00 0.00 0.00 2.59
800 867 3.009253 CGAGCCCTACTCCTTCCTATCTA 59.991 52.174 0.00 0.00 43.01 1.98
801 868 2.224917 CGAGCCCTACTCCTTCCTATCT 60.225 54.545 0.00 0.00 43.01 1.98
802 869 2.164338 CGAGCCCTACTCCTTCCTATC 58.836 57.143 0.00 0.00 43.01 2.08
803 870 1.781529 TCGAGCCCTACTCCTTCCTAT 59.218 52.381 0.00 0.00 43.01 2.57
804 871 1.133853 GTCGAGCCCTACTCCTTCCTA 60.134 57.143 0.00 0.00 43.01 2.94
835 903 0.822121 GCACGGGGAGGAAAAGTTGT 60.822 55.000 0.00 0.00 0.00 3.32
897 965 2.022346 GCGAGTGTGCATGCGATG 59.978 61.111 14.09 0.49 34.15 3.84
898 966 3.197790 GGCGAGTGTGCATGCGAT 61.198 61.111 14.09 0.00 36.28 4.58
899 967 4.678499 TGGCGAGTGTGCATGCGA 62.678 61.111 14.09 0.00 36.28 5.10
900 968 4.450122 GTGGCGAGTGTGCATGCG 62.450 66.667 14.09 0.00 36.28 4.73
932 1000 9.912634 GGTTATAAAGAAGATGAGATGAGAGAG 57.087 37.037 0.00 0.00 0.00 3.20
933 1001 8.572185 CGGTTATAAAGAAGATGAGATGAGAGA 58.428 37.037 0.00 0.00 0.00 3.10
934 1002 7.812191 CCGGTTATAAAGAAGATGAGATGAGAG 59.188 40.741 0.00 0.00 0.00 3.20
971 1064 4.207955 TCACTCAACTACTCACACTCACT 58.792 43.478 0.00 0.00 0.00 3.41
1125 1231 3.041940 ACGCACGTACCAGCTTGC 61.042 61.111 0.00 0.00 0.00 4.01
1189 1301 4.191544 CAGAAAGTGAGTGGTCAAGAACA 58.808 43.478 0.00 0.00 33.27 3.18
1233 1345 1.402613 TGTGCGCATGAATGAAGATGG 59.597 47.619 15.91 0.00 0.00 3.51
1251 1363 4.341783 GCACCTCTGCAGCCCTGT 62.342 66.667 9.47 0.00 43.62 4.00
1282 1401 1.771255 GGCCTCAGGTAGTTGATCCAT 59.229 52.381 0.00 0.00 0.00 3.41
1422 1543 0.916845 TTGCATGTAGGGTAGGGGCA 60.917 55.000 0.00 0.00 0.00 5.36
1480 1601 7.009631 CAGATAAGTAACTGTCATGTACACAGC 59.990 40.741 11.81 0.00 44.50 4.40
1482 1603 7.812669 CACAGATAAGTAACTGTCATGTACACA 59.187 37.037 0.00 0.00 44.07 3.72
1483 1604 7.201444 GCACAGATAAGTAACTGTCATGTACAC 60.201 40.741 0.00 0.00 44.07 2.90
1484 1605 6.811665 GCACAGATAAGTAACTGTCATGTACA 59.188 38.462 0.00 0.00 44.07 2.90
1485 1606 6.020599 CGCACAGATAAGTAACTGTCATGTAC 60.021 42.308 0.00 0.00 44.07 2.90
1486 1607 6.033966 CGCACAGATAAGTAACTGTCATGTA 58.966 40.000 0.00 0.00 44.07 2.29
1564 1689 3.117701 TGTGTCCCTTTCATTCCTTGTCA 60.118 43.478 0.00 0.00 0.00 3.58
1567 1692 4.935352 TTTGTGTCCCTTTCATTCCTTG 57.065 40.909 0.00 0.00 0.00 3.61
1811 1936 4.086227 CGTACGTACTACTCCGTAGTTACG 60.086 50.000 22.55 20.89 45.68 3.18
1820 1945 4.414852 TGCAATTTCGTACGTACTACTCC 58.585 43.478 22.55 6.46 0.00 3.85
1821 1946 5.327091 TCTGCAATTTCGTACGTACTACTC 58.673 41.667 22.55 6.66 0.00 2.59
1822 1947 5.300969 TCTGCAATTTCGTACGTACTACT 57.699 39.130 22.55 3.33 0.00 2.57
1823 1948 4.027864 GCTCTGCAATTTCGTACGTACTAC 60.028 45.833 22.55 0.06 0.00 2.73
1824 1949 4.100529 GCTCTGCAATTTCGTACGTACTA 58.899 43.478 22.55 10.06 0.00 1.82
1888 2017 4.347292 TGGTGTACCACTACATGTTTGGTA 59.653 41.667 24.93 24.93 42.04 3.25
1972 2105 0.182537 CCGCCCCATCCAGAATGTTA 59.817 55.000 0.00 0.00 33.13 2.41
2413 2552 0.610232 GAACCCAGTGGAGCTGCATT 60.610 55.000 12.38 3.69 43.71 3.56
2536 2680 2.685850 ACCCTAGGAAACGTACATGC 57.314 50.000 11.48 0.00 0.00 4.06
2561 2705 6.910536 AACTCATGTAAATACTAGCACAGC 57.089 37.500 0.00 0.00 0.00 4.40
2683 2827 8.198778 TCGAAGCATACAAAACTATATGTGGTA 58.801 33.333 0.00 0.00 32.37 3.25
2873 3017 0.732880 CCGGTTACTGCACGAGTGAG 60.733 60.000 7.50 4.57 35.96 3.51
2936 3080 9.169468 GACACTTGACACTGTTTATTTGTTATG 57.831 33.333 0.00 0.00 0.00 1.90
2956 3103 4.202050 GGAGATGTTTTGCAGTTGACACTT 60.202 41.667 0.00 0.00 0.00 3.16
2957 3104 3.316308 GGAGATGTTTTGCAGTTGACACT 59.684 43.478 0.00 0.00 0.00 3.55
2958 3105 3.550842 GGGAGATGTTTTGCAGTTGACAC 60.551 47.826 0.00 0.00 0.00 3.67
2959 3106 2.622942 GGGAGATGTTTTGCAGTTGACA 59.377 45.455 0.00 0.00 0.00 3.58
2960 3107 2.350772 CGGGAGATGTTTTGCAGTTGAC 60.351 50.000 0.00 0.00 0.00 3.18
2961 3108 1.879380 CGGGAGATGTTTTGCAGTTGA 59.121 47.619 0.00 0.00 0.00 3.18
2962 3109 1.666888 GCGGGAGATGTTTTGCAGTTG 60.667 52.381 0.00 0.00 0.00 3.16
2963 3110 0.598065 GCGGGAGATGTTTTGCAGTT 59.402 50.000 0.00 0.00 0.00 3.16
2981 3129 2.165998 ACTTTCAAAGCTGATGAGGGC 58.834 47.619 0.00 0.00 0.00 5.19
3090 3240 5.990408 ACAGCGAATTAACTCAGTTCTTTG 58.010 37.500 0.00 0.00 0.00 2.77
3091 3241 5.992217 AGACAGCGAATTAACTCAGTTCTTT 59.008 36.000 0.00 0.00 0.00 2.52
3146 3296 0.387239 GTGATTGGCAGTTGAACGGC 60.387 55.000 12.01 12.01 38.59 5.68
3261 3411 4.363990 CGTGACCGACCAGCAGCT 62.364 66.667 0.00 0.00 35.63 4.24
3347 3497 3.661025 GAATTTGCGCGTCCGGGTG 62.661 63.158 8.43 0.00 34.32 4.61
3348 3498 3.428282 GAATTTGCGCGTCCGGGT 61.428 61.111 8.43 0.00 34.32 5.28
3349 3499 4.174129 GGAATTTGCGCGTCCGGG 62.174 66.667 8.43 0.00 34.32 5.73
3392 3546 5.006165 GCTGTTGTGCAGTGTAGAATCTATC 59.994 44.000 0.00 0.00 46.64 2.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.