Multiple sequence alignment - TraesCS3B01G279700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G279700 chr3B 100.000 7755 0 0 1 7755 449288597 449280843 0.000000e+00 14321.0
1 TraesCS3B01G279700 chr3B 98.204 167 3 0 5674 5840 719093552 719093386 7.610000e-75 292.0
2 TraesCS3B01G279700 chr3B 94.350 177 10 0 5671 5847 631573593 631573769 9.920000e-69 272.0
3 TraesCS3B01G279700 chr3B 96.610 118 4 0 7638 7755 543155760 543155877 6.140000e-46 196.0
4 TraesCS3B01G279700 chr3B 89.908 109 11 0 4701 4809 110451967 110452075 2.920000e-29 141.0
5 TraesCS3B01G279700 chr3B 88.596 114 10 2 4692 4802 423806088 423806201 1.360000e-27 135.0
6 TraesCS3B01G279700 chr3B 90.741 54 4 1 7552 7604 602306513 602306566 3.880000e-08 71.3
7 TraesCS3B01G279700 chr3D 95.709 4614 119 33 4 4558 350828359 350823766 0.000000e+00 7350.0
8 TraesCS3B01G279700 chr3D 94.073 1721 72 16 5842 7539 350822662 350820949 0.000000e+00 2586.0
9 TraesCS3B01G279700 chr3D 95.141 885 32 7 4801 5675 350823549 350822666 0.000000e+00 1386.0
10 TraesCS3B01G279700 chr3D 95.302 149 5 1 4559 4707 350823694 350823548 1.300000e-57 235.0
11 TraesCS3B01G279700 chr3A 95.626 3612 108 21 995 4562 468588494 468584889 0.000000e+00 5749.0
12 TraesCS3B01G279700 chr3A 92.361 1728 83 23 5842 7539 468583793 468582085 0.000000e+00 2414.0
13 TraesCS3B01G279700 chr3A 95.687 881 29 8 4801 5675 468584674 468583797 0.000000e+00 1408.0
14 TraesCS3B01G279700 chr3A 93.161 965 26 18 6 949 468589707 468588762 0.000000e+00 1380.0
15 TraesCS3B01G279700 chr3A 100.000 165 0 0 5674 5838 639157121 639156957 9.780000e-79 305.0
16 TraesCS3B01G279700 chr3A 96.644 149 4 1 4559 4707 468584820 468584673 6.010000e-61 246.0
17 TraesCS3B01G279700 chr3A 96.610 118 4 0 7638 7755 83394403 83394286 6.140000e-46 196.0
18 TraesCS3B01G279700 chrUn 98.810 168 2 0 5674 5841 82595919 82595752 4.550000e-77 300.0
19 TraesCS3B01G279700 chr4A 99.394 165 1 0 5674 5838 47105473 47105637 4.550000e-77 300.0
20 TraesCS3B01G279700 chr4A 96.552 116 4 0 7640 7755 13751468 13751583 7.940000e-45 193.0
21 TraesCS3B01G279700 chr2A 99.394 165 1 0 5674 5838 488846634 488846470 4.550000e-77 300.0
22 TraesCS3B01G279700 chr2A 96.552 116 4 0 7640 7755 72391598 72391483 7.940000e-45 193.0
23 TraesCS3B01G279700 chr2A 89.130 92 10 0 7549 7640 752332570 752332661 1.770000e-21 115.0
24 TraesCS3B01G279700 chr4B 97.633 169 4 0 5670 5838 671653918 671654086 2.740000e-74 291.0
25 TraesCS3B01G279700 chr2B 96.045 177 7 0 5671 5847 331245651 331245475 9.850000e-74 289.0
26 TraesCS3B01G279700 chr2B 96.552 116 4 0 7640 7755 158614511 158614396 7.940000e-45 193.0
27 TraesCS3B01G279700 chr1B 95.028 181 7 2 5666 5844 313332047 313332227 4.580000e-72 283.0
28 TraesCS3B01G279700 chr5B 96.694 121 4 0 7635 7755 328979268 328979388 1.320000e-47 202.0
29 TraesCS3B01G279700 chr6A 97.414 116 3 0 7640 7755 495578897 495578782 1.710000e-46 198.0
30 TraesCS3B01G279700 chr6A 97.391 115 3 0 7641 7755 534739939 534739825 6.140000e-46 196.0
31 TraesCS3B01G279700 chr7B 96.610 118 4 0 7638 7755 435115615 435115732 6.140000e-46 196.0
32 TraesCS3B01G279700 chr7B 91.346 104 8 1 4700 4802 237489305 237489408 2.920000e-29 141.0
33 TraesCS3B01G279700 chr4D 92.079 101 8 0 4703 4803 323929672 323929572 8.110000e-30 143.0
34 TraesCS3B01G279700 chr4D 89.189 111 11 1 4700 4809 205963545 205963435 3.770000e-28 137.0
35 TraesCS3B01G279700 chr6D 90.000 110 10 1 4694 4803 200398703 200398811 2.920000e-29 141.0
36 TraesCS3B01G279700 chr5D 90.654 107 9 1 4704 4809 521371679 521371573 2.920000e-29 141.0
37 TraesCS3B01G279700 chr5A 90.566 106 9 1 4706 4811 702581603 702581707 1.050000e-28 139.0
38 TraesCS3B01G279700 chr1A 85.714 126 14 4 4687 4810 251345767 251345890 6.310000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G279700 chr3B 449280843 449288597 7754 True 14321.00 14321 100.00000 1 7755 1 chr3B.!!$R1 7754
1 TraesCS3B01G279700 chr3D 350820949 350828359 7410 True 2889.25 7350 95.05625 4 7539 4 chr3D.!!$R1 7535
2 TraesCS3B01G279700 chr3A 468582085 468589707 7622 True 2239.40 5749 94.69580 6 7539 5 chr3A.!!$R3 7533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
616 621 0.321122 GCTCGATCCATCCATCCACC 60.321 60.000 0.00 0.0 0.00 4.61 F
617 622 0.322975 CTCGATCCATCCATCCACCC 59.677 60.000 0.00 0.0 0.00 4.61 F
618 623 0.399806 TCGATCCATCCATCCACCCA 60.400 55.000 0.00 0.0 0.00 4.51 F
2469 2727 0.827925 AGAAGCTCGGGACAGTGACA 60.828 55.000 0.00 0.0 0.00 3.58 F
2532 2790 0.870393 CCGATGCTAATGCGATTGCT 59.130 50.000 6.47 0.0 43.34 3.91 F
3221 3487 1.135915 GTCGAGATGATGCCTGTCACT 59.864 52.381 0.00 0.0 0.00 3.41 F
3227 3493 1.576577 TGATGCCTGTCACTGATCCT 58.423 50.000 0.00 0.0 0.00 3.24 F
5062 5452 1.680338 GCATGGGTCCTATTGGTGTC 58.320 55.000 0.00 0.0 34.23 3.67 F
6038 6434 1.077716 AACTGCCGGTATTGAGCCC 60.078 57.895 1.90 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1476 1720 0.107654 CGGGGTTCTCCATGAGGTTC 60.108 60.000 0.00 0.00 37.22 3.62 R
1545 1789 1.210413 GTTGAGCAGCGACTCGAGA 59.790 57.895 21.68 0.00 39.68 4.04 R
2549 2807 1.352156 AACGCGAAGGTTCATCTCGC 61.352 55.000 15.93 5.65 44.99 5.03 R
3881 4167 1.490490 TCCTAATGGCTCCATCACACC 59.510 52.381 1.31 0.00 35.31 4.16 R
3945 4250 1.491668 TGCGGTAATTCTAGCCCTGA 58.508 50.000 0.00 0.00 0.00 3.86 R
5194 5584 1.098050 GACAGCAGGCCACCAAATAG 58.902 55.000 5.01 0.00 0.00 1.73 R
5375 5766 5.277876 CCAAATTAGTCTGATGATGCAGCTC 60.278 44.000 2.53 0.00 35.86 4.09 R
6334 6737 0.034380 AGAGACCGGAGACCATTCGA 60.034 55.000 9.46 0.00 0.00 3.71 R
7639 8066 0.236449 CGACGTTTGCCCAGGTTTAC 59.764 55.000 0.00 0.00 0.00 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
212 213 2.203788 TCCGGGTCTGCTCCACTT 60.204 61.111 0.00 0.00 0.00 3.16
331 335 1.448893 CCATCCCCACGTGTTACCG 60.449 63.158 15.65 0.00 0.00 4.02
334 338 1.833787 ATCCCCACGTGTTACCGCTT 61.834 55.000 15.65 0.00 0.00 4.68
348 352 2.427245 CGCTTCCTGGACCGGATCT 61.427 63.158 9.46 0.00 32.02 2.75
578 583 3.813143 TTGGGACGCGCGTCGATA 61.813 61.111 44.86 33.45 45.41 2.92
579 584 3.744749 TTGGGACGCGCGTCGATAG 62.745 63.158 44.86 15.44 45.41 2.08
581 586 3.017314 GGACGCGCGTCGATAGTG 61.017 66.667 44.86 13.92 45.41 2.74
582 587 2.277120 GACGCGCGTCGATAGTGT 60.277 61.111 42.42 15.83 41.67 3.55
583 588 2.277120 ACGCGCGTCGATAGTGTC 60.277 61.111 32.73 0.00 41.67 3.67
615 620 0.668706 CGCTCGATCCATCCATCCAC 60.669 60.000 0.00 0.00 0.00 4.02
616 621 0.321122 GCTCGATCCATCCATCCACC 60.321 60.000 0.00 0.00 0.00 4.61
617 622 0.322975 CTCGATCCATCCATCCACCC 59.677 60.000 0.00 0.00 0.00 4.61
618 623 0.399806 TCGATCCATCCATCCACCCA 60.400 55.000 0.00 0.00 0.00 4.51
667 672 3.766691 GCGCCCGTTCCCACTCTA 61.767 66.667 0.00 0.00 0.00 2.43
1701 1945 1.561643 AGAAGACCTTCCTCATCGCA 58.438 50.000 6.17 0.00 40.33 5.10
1863 2107 1.384643 GGGGGAGGTGCTGGACTAT 60.385 63.158 0.00 0.00 0.00 2.12
2062 2306 1.229082 TCCCAGGAGTACAAGCGGT 60.229 57.895 0.00 0.00 0.00 5.68
2225 2469 0.831711 ACCCACTCACCAAATTGCCC 60.832 55.000 0.00 0.00 0.00 5.36
2236 2480 2.355756 CCAAATTGCCCGATAGTGACAG 59.644 50.000 0.00 0.00 0.00 3.51
2287 2535 2.106511 CTGATATGGGTGGGTTAGTGGG 59.893 54.545 0.00 0.00 0.00 4.61
2297 2545 1.608283 GGGTTAGTGGGCGAGCATATC 60.608 57.143 0.00 0.00 0.00 1.63
2469 2727 0.827925 AGAAGCTCGGGACAGTGACA 60.828 55.000 0.00 0.00 0.00 3.58
2496 2754 1.185618 AGCTGCCCTACTTCGACACA 61.186 55.000 0.00 0.00 0.00 3.72
2532 2790 0.870393 CCGATGCTAATGCGATTGCT 59.130 50.000 6.47 0.00 43.34 3.91
2549 2807 2.034066 TGAGGAGGCCCGCAAAAG 59.966 61.111 0.00 0.00 39.36 2.27
2628 2892 2.280628 GTGATCCACTCCAACCGAATC 58.719 52.381 0.00 0.00 0.00 2.52
2634 2898 2.423538 CCACTCCAACCGAATCAATTCC 59.576 50.000 0.00 0.00 33.28 3.01
2654 2918 5.873179 TCCGAGTTTCGAGCATTAATTTT 57.127 34.783 0.00 0.00 43.74 1.82
2803 3068 5.630061 CGTGCTTCATGTCAAATTATGTCA 58.370 37.500 0.00 0.00 0.00 3.58
2805 3070 5.509272 GTGCTTCATGTCAAATTATGTCACG 59.491 40.000 0.00 0.00 29.85 4.35
2806 3071 5.030295 GCTTCATGTCAAATTATGTCACGG 58.970 41.667 0.00 0.00 29.85 4.94
2809 3074 6.176975 TCATGTCAAATTATGTCACGGTTC 57.823 37.500 0.00 0.00 29.85 3.62
2810 3075 5.123186 TCATGTCAAATTATGTCACGGTTCC 59.877 40.000 0.00 0.00 29.85 3.62
2893 3158 2.637947 GTCTCAAGCTCAATTCCTCCC 58.362 52.381 0.00 0.00 0.00 4.30
2944 3209 6.006275 ACTCACCCAATCTTTAGCATGTAT 57.994 37.500 0.00 0.00 0.00 2.29
2987 3252 5.960105 GCATCTTTTGCGTCAGTAATCTTAC 59.040 40.000 0.00 0.00 42.54 2.34
3221 3487 1.135915 GTCGAGATGATGCCTGTCACT 59.864 52.381 0.00 0.00 0.00 3.41
3227 3493 1.576577 TGATGCCTGTCACTGATCCT 58.423 50.000 0.00 0.00 0.00 3.24
3299 3565 6.128172 GCTATCATGTATGGACCATTTAGCAC 60.128 42.308 13.40 4.78 34.57 4.40
3312 3578 8.736244 GGACCATTTAGCACTTATTTAGTTTCA 58.264 33.333 0.00 0.00 33.85 2.69
3510 3780 4.127171 AGGTATGTCATGATAAACACGCC 58.873 43.478 0.00 0.00 0.00 5.68
3767 4037 4.526650 TGTCTGCTCTGATGGTACTGTTTA 59.473 41.667 0.00 0.00 0.00 2.01
3768 4038 5.187772 TGTCTGCTCTGATGGTACTGTTTAT 59.812 40.000 0.00 0.00 0.00 1.40
3769 4039 6.379988 TGTCTGCTCTGATGGTACTGTTTATA 59.620 38.462 0.00 0.00 0.00 0.98
3789 4059 9.077674 GTTTATATACGCTCTGTCAATATGAGG 57.922 37.037 0.00 0.00 0.00 3.86
3819 4100 4.101741 ACCTCAGTGTTACTCTTTCAGCTT 59.898 41.667 0.00 0.00 0.00 3.74
3894 4180 5.746990 ACTATATTAGGTGTGATGGAGCC 57.253 43.478 0.00 0.00 0.00 4.70
4011 4318 3.455910 ACTATACTGCCTCCTTTCATGCA 59.544 43.478 0.00 0.00 0.00 3.96
4135 4442 6.182627 TGGAAATCAGACAACTGCTTCATAT 58.817 36.000 0.00 0.00 43.17 1.78
4244 4552 8.837788 TGAAGCTACATATGGTTGATGAATAG 57.162 34.615 7.80 0.00 0.00 1.73
4318 4627 4.022849 GGAAAATGTTGAGTTCACTGAGGG 60.023 45.833 0.00 0.00 0.00 4.30
4325 4637 5.104693 TGTTGAGTTCACTGAGGGAAGTTTA 60.105 40.000 6.20 0.00 0.00 2.01
4326 4638 5.825593 TGAGTTCACTGAGGGAAGTTTAT 57.174 39.130 6.20 0.00 0.00 1.40
4327 4639 6.187727 TGAGTTCACTGAGGGAAGTTTATT 57.812 37.500 6.20 0.00 0.00 1.40
4334 4646 7.287061 TCACTGAGGGAAGTTTATTGAAGAAA 58.713 34.615 0.00 0.00 0.00 2.52
4336 4648 8.239998 CACTGAGGGAAGTTTATTGAAGAAATC 58.760 37.037 0.00 0.00 0.00 2.17
4341 4653 8.090831 AGGGAAGTTTATTGAAGAAATCTTTGC 58.909 33.333 0.00 0.00 36.11 3.68
4547 4859 7.717875 ACTTTGTTATGCCACTTTGTCTACTTA 59.282 33.333 0.00 0.00 0.00 2.24
4581 4964 9.109393 TGCCAATATAATGAAGTTTAGTCTGAC 57.891 33.333 0.00 0.00 0.00 3.51
4723 5107 7.979786 AGAAAATACTCTCTCCATCCTAACA 57.020 36.000 0.00 0.00 0.00 2.41
4724 5108 8.560124 AGAAAATACTCTCTCCATCCTAACAT 57.440 34.615 0.00 0.00 0.00 2.71
4725 5109 9.661954 AGAAAATACTCTCTCCATCCTAACATA 57.338 33.333 0.00 0.00 0.00 2.29
4728 5112 9.440761 AAATACTCTCTCCATCCTAACATAAGT 57.559 33.333 0.00 0.00 0.00 2.24
4729 5113 6.723298 ACTCTCTCCATCCTAACATAAGTG 57.277 41.667 0.00 0.00 0.00 3.16
4730 5114 6.198639 ACTCTCTCCATCCTAACATAAGTGT 58.801 40.000 0.00 0.00 41.28 3.55
4731 5115 6.322712 ACTCTCTCCATCCTAACATAAGTGTC 59.677 42.308 0.00 0.00 37.67 3.67
4732 5116 6.436027 TCTCTCCATCCTAACATAAGTGTCT 58.564 40.000 0.00 0.00 37.67 3.41
4733 5117 6.547880 TCTCTCCATCCTAACATAAGTGTCTC 59.452 42.308 0.00 0.00 37.67 3.36
4734 5118 6.194967 TCTCCATCCTAACATAAGTGTCTCA 58.805 40.000 0.00 0.00 37.67 3.27
4735 5119 6.667848 TCTCCATCCTAACATAAGTGTCTCAA 59.332 38.462 0.00 0.00 37.67 3.02
4736 5120 6.640518 TCCATCCTAACATAAGTGTCTCAAC 58.359 40.000 0.00 0.00 37.67 3.18
4737 5121 6.440647 TCCATCCTAACATAAGTGTCTCAACT 59.559 38.462 0.00 0.00 37.67 3.16
4738 5122 7.038302 TCCATCCTAACATAAGTGTCTCAACTT 60.038 37.037 0.00 0.00 42.89 2.66
4739 5123 7.607991 CCATCCTAACATAAGTGTCTCAACTTT 59.392 37.037 0.00 0.00 40.77 2.66
4740 5124 7.962964 TCCTAACATAAGTGTCTCAACTTTG 57.037 36.000 0.00 0.00 40.77 2.77
4741 5125 7.506114 TCCTAACATAAGTGTCTCAACTTTGT 58.494 34.615 0.00 0.00 40.77 2.83
4742 5126 8.644216 TCCTAACATAAGTGTCTCAACTTTGTA 58.356 33.333 0.00 0.00 40.77 2.41
4743 5127 8.709646 CCTAACATAAGTGTCTCAACTTTGTAC 58.290 37.037 0.00 0.00 40.77 2.90
4744 5128 9.477484 CTAACATAAGTGTCTCAACTTTGTACT 57.523 33.333 0.00 0.00 40.77 2.73
4746 5130 9.826574 AACATAAGTGTCTCAACTTTGTACTAA 57.173 29.630 0.00 0.00 40.77 2.24
4747 5131 9.257651 ACATAAGTGTCTCAACTTTGTACTAAC 57.742 33.333 0.00 0.00 40.77 2.34
4748 5132 9.477484 CATAAGTGTCTCAACTTTGTACTAACT 57.523 33.333 0.00 0.00 40.77 2.24
4750 5134 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
4751 5135 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
4752 5136 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
4753 5137 9.310716 GTGTCTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
4777 5161 6.579491 ACAAAGTTGTACTAACGTTGAGAC 57.421 37.500 26.54 6.21 40.42 3.36
4778 5162 6.101332 ACAAAGTTGTACTAACGTTGAGACA 58.899 36.000 26.54 8.86 40.42 3.41
4779 5163 6.035327 ACAAAGTTGTACTAACGTTGAGACAC 59.965 38.462 26.54 8.56 40.42 3.67
4780 5164 5.511234 AGTTGTACTAACGTTGAGACACT 57.489 39.130 11.99 8.69 0.00 3.55
4781 5165 5.899299 AGTTGTACTAACGTTGAGACACTT 58.101 37.500 11.99 0.38 0.00 3.16
4782 5166 7.031226 AGTTGTACTAACGTTGAGACACTTA 57.969 36.000 11.99 0.00 0.00 2.24
4783 5167 7.655490 AGTTGTACTAACGTTGAGACACTTAT 58.345 34.615 11.99 0.00 0.00 1.73
4784 5168 8.139989 AGTTGTACTAACGTTGAGACACTTATT 58.860 33.333 11.99 0.00 0.00 1.40
4785 5169 8.758715 GTTGTACTAACGTTGAGACACTTATTT 58.241 33.333 11.99 0.00 0.00 1.40
4786 5170 8.876275 TGTACTAACGTTGAGACACTTATTTT 57.124 30.769 11.99 0.00 0.00 1.82
4787 5171 9.964303 TGTACTAACGTTGAGACACTTATTTTA 57.036 29.630 11.99 0.00 0.00 1.52
4789 5173 8.530269 ACTAACGTTGAGACACTTATTTTAGG 57.470 34.615 11.99 0.00 0.00 2.69
4790 5174 8.362639 ACTAACGTTGAGACACTTATTTTAGGA 58.637 33.333 11.99 0.00 0.00 2.94
4791 5175 7.417496 AACGTTGAGACACTTATTTTAGGAC 57.583 36.000 0.00 0.00 0.00 3.85
4792 5176 6.518493 ACGTTGAGACACTTATTTTAGGACA 58.482 36.000 0.00 0.00 0.00 4.02
4793 5177 6.645415 ACGTTGAGACACTTATTTTAGGACAG 59.355 38.462 0.00 0.00 0.00 3.51
4794 5178 6.866770 CGTTGAGACACTTATTTTAGGACAGA 59.133 38.462 0.00 0.00 0.00 3.41
4795 5179 7.384115 CGTTGAGACACTTATTTTAGGACAGAA 59.616 37.037 0.00 0.00 0.00 3.02
4796 5180 8.713271 GTTGAGACACTTATTTTAGGACAGAAG 58.287 37.037 0.00 0.00 0.00 2.85
4797 5181 7.386851 TGAGACACTTATTTTAGGACAGAAGG 58.613 38.462 0.00 0.00 0.00 3.46
4798 5182 7.234782 TGAGACACTTATTTTAGGACAGAAGGA 59.765 37.037 0.00 0.00 0.00 3.36
4799 5183 7.616313 AGACACTTATTTTAGGACAGAAGGAG 58.384 38.462 0.00 0.00 0.00 3.69
4862 5246 8.787852 ACTGAAAATCTGAACCTAATTGAGAAC 58.212 33.333 0.00 0.00 33.93 3.01
4863 5247 8.110860 TGAAAATCTGAACCTAATTGAGAACC 57.889 34.615 0.00 0.00 33.93 3.62
4920 5304 5.923733 ATGTACCCTACAGAGAAAGACAG 57.076 43.478 0.00 0.00 42.77 3.51
5062 5452 1.680338 GCATGGGTCCTATTGGTGTC 58.320 55.000 0.00 0.00 34.23 3.67
5113 5503 4.078571 TCTCATCCAGTGGTAGGTATCCTT 60.079 45.833 9.54 0.00 34.61 3.36
5206 5596 2.446435 TGAGCTTTCTATTTGGTGGCC 58.554 47.619 0.00 0.00 0.00 5.36
5210 5600 2.450476 CTTTCTATTTGGTGGCCTGCT 58.550 47.619 3.32 0.00 0.00 4.24
5303 5693 4.522789 ACTCGAACCATGGCTTTAATGTTT 59.477 37.500 13.04 0.00 0.00 2.83
5304 5694 4.804108 TCGAACCATGGCTTTAATGTTTG 58.196 39.130 13.04 0.00 0.00 2.93
5305 5695 4.520874 TCGAACCATGGCTTTAATGTTTGA 59.479 37.500 13.04 2.39 0.00 2.69
5306 5696 4.858692 CGAACCATGGCTTTAATGTTTGAG 59.141 41.667 13.04 0.00 0.00 3.02
5307 5697 5.564651 CGAACCATGGCTTTAATGTTTGAGT 60.565 40.000 13.04 0.00 0.00 3.41
5308 5698 6.348950 CGAACCATGGCTTTAATGTTTGAGTA 60.349 38.462 13.04 0.00 0.00 2.59
5309 5699 6.267496 ACCATGGCTTTAATGTTTGAGTAC 57.733 37.500 13.04 0.00 0.00 2.73
5310 5700 6.010219 ACCATGGCTTTAATGTTTGAGTACT 58.990 36.000 13.04 0.00 0.00 2.73
5380 5771 8.216453 CGTTTCATTTAAAAGAAAATGGAGCTG 58.784 33.333 17.51 0.00 43.81 4.24
5384 5775 7.546667 TCATTTAAAAGAAAATGGAGCTGCATC 59.453 33.333 21.89 10.23 43.81 3.91
5434 5825 1.763770 CACTGGTGGCTTCCCTCTT 59.236 57.895 0.00 0.00 0.00 2.85
5623 6016 6.156949 AGGTACTTGATGTTACTCATGGTCAT 59.843 38.462 0.00 0.00 32.75 3.06
5629 6022 7.790823 TGATGTTACTCATGGTCATACATTG 57.209 36.000 0.00 0.00 36.83 2.82
5634 6027 3.887110 ACTCATGGTCATACATTGCATGG 59.113 43.478 0.00 0.00 30.83 3.66
5647 6040 6.107901 ACATTGCATGGCCTTTACTAAAAA 57.892 33.333 3.32 0.00 33.60 1.94
5648 6041 6.710278 ACATTGCATGGCCTTTACTAAAAAT 58.290 32.000 3.32 0.00 33.60 1.82
5679 6074 7.981102 ATTGTTGAACTACTTTTCTACTCCC 57.019 36.000 0.00 0.00 33.82 4.30
5680 6075 6.742559 TGTTGAACTACTTTTCTACTCCCT 57.257 37.500 0.00 0.00 33.82 4.20
5681 6076 6.756221 TGTTGAACTACTTTTCTACTCCCTC 58.244 40.000 0.00 0.00 33.82 4.30
5682 6077 5.997384 TGAACTACTTTTCTACTCCCTCC 57.003 43.478 0.00 0.00 0.00 4.30
5683 6078 4.461781 TGAACTACTTTTCTACTCCCTCCG 59.538 45.833 0.00 0.00 0.00 4.63
5684 6079 4.044946 ACTACTTTTCTACTCCCTCCGT 57.955 45.455 0.00 0.00 0.00 4.69
5685 6080 4.414677 ACTACTTTTCTACTCCCTCCGTT 58.585 43.478 0.00 0.00 0.00 4.44
5686 6081 3.957591 ACTTTTCTACTCCCTCCGTTC 57.042 47.619 0.00 0.00 0.00 3.95
5687 6082 2.566279 ACTTTTCTACTCCCTCCGTTCC 59.434 50.000 0.00 0.00 0.00 3.62
5688 6083 2.617840 TTTCTACTCCCTCCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
5689 6084 3.744940 TTTCTACTCCCTCCGTTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
5690 6085 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
5691 6086 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
5692 6087 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
5693 6088 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
5694 6089 5.769835 TCTACTCCCTCCGTTCCTAAATAA 58.230 41.667 0.00 0.00 0.00 1.40
5695 6090 6.379579 TCTACTCCCTCCGTTCCTAAATAAT 58.620 40.000 0.00 0.00 0.00 1.28
5696 6091 5.970501 ACTCCCTCCGTTCCTAAATAATT 57.029 39.130 0.00 0.00 0.00 1.40
5697 6092 5.681639 ACTCCCTCCGTTCCTAAATAATTG 58.318 41.667 0.00 0.00 0.00 2.32
5698 6093 5.191124 ACTCCCTCCGTTCCTAAATAATTGT 59.809 40.000 0.00 0.00 0.00 2.71
5699 6094 5.677567 TCCCTCCGTTCCTAAATAATTGTC 58.322 41.667 0.00 0.00 0.00 3.18
5700 6095 5.427481 TCCCTCCGTTCCTAAATAATTGTCT 59.573 40.000 0.00 0.00 0.00 3.41
5701 6096 6.069847 TCCCTCCGTTCCTAAATAATTGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
5702 6097 6.602009 CCCTCCGTTCCTAAATAATTGTCTTT 59.398 38.462 0.00 0.00 0.00 2.52
5703 6098 7.201705 CCCTCCGTTCCTAAATAATTGTCTTTC 60.202 40.741 0.00 0.00 0.00 2.62
5704 6099 7.553044 CCTCCGTTCCTAAATAATTGTCTTTCT 59.447 37.037 0.00 0.00 0.00 2.52
5705 6100 9.595823 CTCCGTTCCTAAATAATTGTCTTTCTA 57.404 33.333 0.00 0.00 0.00 2.10
5706 6101 9.595823 TCCGTTCCTAAATAATTGTCTTTCTAG 57.404 33.333 0.00 0.00 0.00 2.43
5707 6102 8.336080 CCGTTCCTAAATAATTGTCTTTCTAGC 58.664 37.037 0.00 0.00 0.00 3.42
5708 6103 9.099454 CGTTCCTAAATAATTGTCTTTCTAGCT 57.901 33.333 0.00 0.00 0.00 3.32
5719 6114 9.896645 AATTGTCTTTCTAGCTATCTCAAATGA 57.103 29.630 0.00 0.00 0.00 2.57
5720 6115 9.896645 ATTGTCTTTCTAGCTATCTCAAATGAA 57.103 29.630 0.00 0.00 0.00 2.57
5721 6116 8.709386 TGTCTTTCTAGCTATCTCAAATGAAC 57.291 34.615 0.00 0.00 0.00 3.18
5722 6117 8.535335 TGTCTTTCTAGCTATCTCAAATGAACT 58.465 33.333 0.00 0.00 0.00 3.01
5725 6120 9.809096 CTTTCTAGCTATCTCAAATGAACTACA 57.191 33.333 0.00 0.00 0.00 2.74
5727 6122 9.587772 TTCTAGCTATCTCAAATGAACTACAAC 57.412 33.333 0.00 0.00 0.00 3.32
5728 6123 8.749354 TCTAGCTATCTCAAATGAACTACAACA 58.251 33.333 0.00 0.00 0.00 3.33
5729 6124 9.539825 CTAGCTATCTCAAATGAACTACAACAT 57.460 33.333 0.00 0.00 0.00 2.71
5731 6126 9.319143 AGCTATCTCAAATGAACTACAACATAC 57.681 33.333 0.00 0.00 0.00 2.39
5732 6127 8.269424 GCTATCTCAAATGAACTACAACATACG 58.731 37.037 0.00 0.00 0.00 3.06
5733 6128 6.961359 TCTCAAATGAACTACAACATACGG 57.039 37.500 0.00 0.00 0.00 4.02
5734 6129 6.693466 TCTCAAATGAACTACAACATACGGA 58.307 36.000 0.00 0.00 0.00 4.69
5735 6130 7.327975 TCTCAAATGAACTACAACATACGGAT 58.672 34.615 0.00 0.00 0.00 4.18
5736 6131 7.277760 TCTCAAATGAACTACAACATACGGATG 59.722 37.037 5.94 5.94 39.16 3.51
5738 6133 8.035984 TCAAATGAACTACAACATACGGATGTA 58.964 33.333 15.10 0.00 45.93 2.29
5739 6134 8.826710 CAAATGAACTACAACATACGGATGTAT 58.173 33.333 15.10 8.21 45.93 2.29
5754 6149 9.692749 ATACGGATGTATGTAGACATGTTTTAG 57.307 33.333 0.00 0.00 40.18 1.85
5755 6150 7.778083 ACGGATGTATGTAGACATGTTTTAGA 58.222 34.615 0.00 0.00 40.18 2.10
5756 6151 7.921214 ACGGATGTATGTAGACATGTTTTAGAG 59.079 37.037 0.00 0.00 40.18 2.43
5757 6152 7.921214 CGGATGTATGTAGACATGTTTTAGAGT 59.079 37.037 0.00 0.00 40.18 3.24
5758 6153 9.035607 GGATGTATGTAGACATGTTTTAGAGTG 57.964 37.037 0.00 0.00 40.18 3.51
5759 6154 9.587772 GATGTATGTAGACATGTTTTAGAGTGT 57.412 33.333 0.00 0.00 40.18 3.55
5765 6160 9.856488 TGTAGACATGTTTTAGAGTGTAGATTC 57.144 33.333 0.00 0.00 0.00 2.52
5766 6161 9.856488 GTAGACATGTTTTAGAGTGTAGATTCA 57.144 33.333 0.00 0.00 0.00 2.57
5767 6162 8.764524 AGACATGTTTTAGAGTGTAGATTCAC 57.235 34.615 0.00 0.00 38.46 3.18
5778 6173 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5779 6174 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5780 6175 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5781 6176 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
5782 6177 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5783 6178 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
5784 6179 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
5785 6180 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
5786 6181 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
5787 6182 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
5788 6183 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
5789 6184 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
5790 6185 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
5791 6186 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
5792 6187 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
5793 6188 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
5794 6189 5.794687 TTTGCTCCGTATGTAGTCATTTG 57.205 39.130 0.00 0.00 35.70 2.32
5795 6190 4.465632 TGCTCCGTATGTAGTCATTTGT 57.534 40.909 0.00 0.00 35.70 2.83
5796 6191 4.827692 TGCTCCGTATGTAGTCATTTGTT 58.172 39.130 0.00 0.00 35.70 2.83
5797 6192 4.629634 TGCTCCGTATGTAGTCATTTGTTG 59.370 41.667 0.00 0.00 35.70 3.33
5798 6193 4.868171 GCTCCGTATGTAGTCATTTGTTGA 59.132 41.667 0.00 0.00 35.70 3.18
5799 6194 5.350365 GCTCCGTATGTAGTCATTTGTTGAA 59.650 40.000 0.00 0.00 35.70 2.69
5800 6195 6.128391 GCTCCGTATGTAGTCATTTGTTGAAA 60.128 38.462 0.00 0.00 35.70 2.69
5801 6196 7.414098 GCTCCGTATGTAGTCATTTGTTGAAAT 60.414 37.037 0.00 0.00 35.70 2.17
5802 6197 7.970384 TCCGTATGTAGTCATTTGTTGAAATC 58.030 34.615 0.00 0.00 35.70 2.17
5803 6198 7.822334 TCCGTATGTAGTCATTTGTTGAAATCT 59.178 33.333 0.00 0.00 35.70 2.40
5804 6199 8.116753 CCGTATGTAGTCATTTGTTGAAATCTC 58.883 37.037 0.00 0.00 35.70 2.75
5805 6200 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
5809 6204 9.996554 TGTAGTCATTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 35.70 2.10
5812 6207 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
5813 6208 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
5814 6209 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
5829 6224 9.595823 TCTAGAAAGACAATTATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
5830 6225 9.595823 CTAGAAAGACAATTATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
5831 6226 8.494016 AGAAAGACAATTATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
5832 6227 7.553044 AGAAAGACAATTATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
5833 6228 6.555463 AGACAATTATTTAGGAACGGAGGA 57.445 37.500 0.00 0.00 0.00 3.71
5834 6229 6.954232 AGACAATTATTTAGGAACGGAGGAA 58.046 36.000 0.00 0.00 0.00 3.36
5835 6230 7.048512 AGACAATTATTTAGGAACGGAGGAAG 58.951 38.462 0.00 0.00 0.00 3.46
5836 6231 6.718294 ACAATTATTTAGGAACGGAGGAAGT 58.282 36.000 0.00 0.00 0.00 3.01
5837 6232 7.854337 ACAATTATTTAGGAACGGAGGAAGTA 58.146 34.615 0.00 0.00 0.00 2.24
5838 6233 8.323567 ACAATTATTTAGGAACGGAGGAAGTAA 58.676 33.333 0.00 0.00 0.00 2.24
5839 6234 9.338622 CAATTATTTAGGAACGGAGGAAGTAAT 57.661 33.333 0.00 0.00 0.00 1.89
5850 6245 7.047460 ACGGAGGAAGTAATATGTAACGAAT 57.953 36.000 0.00 0.00 0.00 3.34
5852 6247 7.983484 ACGGAGGAAGTAATATGTAACGAATTT 59.017 33.333 0.00 0.00 0.00 1.82
5869 6264 3.915437 ATTTTGCAGAAACACTACCCG 57.085 42.857 0.00 0.00 0.00 5.28
5921 6316 5.462530 TGCCCATGAATTCATCATTGATC 57.537 39.130 18.16 5.00 46.85 2.92
5987 6383 5.050091 GTGCCTCGTGTTTATCCATATCAAG 60.050 44.000 0.00 0.00 0.00 3.02
5992 6388 6.635755 TCGTGTTTATCCATATCAAGTCACA 58.364 36.000 0.00 0.00 0.00 3.58
5993 6389 7.272244 TCGTGTTTATCCATATCAAGTCACAT 58.728 34.615 0.00 0.00 0.00 3.21
6008 6404 5.762179 AGTCACATACTGGATCTTGGAAA 57.238 39.130 0.00 0.00 36.93 3.13
6038 6434 1.077716 AACTGCCGGTATTGAGCCC 60.078 57.895 1.90 0.00 0.00 5.19
6068 6464 1.858091 CGAAGCGCTTGATGGACTAT 58.142 50.000 30.47 0.00 0.00 2.12
6131 6527 5.122869 CACACTTATGATTGAACCCACTGAG 59.877 44.000 0.00 0.00 0.00 3.35
6168 6571 3.099905 AGCATGTCTCCTACTGCTTGTA 58.900 45.455 0.00 0.00 38.57 2.41
6176 6579 2.632996 TCCTACTGCTTGTAGTTGCACT 59.367 45.455 13.56 0.00 45.36 4.40
6177 6580 3.071023 TCCTACTGCTTGTAGTTGCACTT 59.929 43.478 13.56 0.00 45.36 3.16
6179 6582 5.046591 TCCTACTGCTTGTAGTTGCACTTAT 60.047 40.000 13.56 0.00 45.36 1.73
6180 6583 5.063944 CCTACTGCTTGTAGTTGCACTTATG 59.936 44.000 13.56 0.00 45.36 1.90
6187 6590 3.818210 TGTAGTTGCACTTATGGTTGGTG 59.182 43.478 0.00 0.00 0.00 4.17
6209 6612 2.787473 TGCATTAGCTTACTGCCACT 57.213 45.000 11.02 0.00 44.23 4.00
6212 6615 3.009723 GCATTAGCTTACTGCCACTTCA 58.990 45.455 0.00 0.00 44.23 3.02
6214 6617 4.260948 GCATTAGCTTACTGCCACTTCATC 60.261 45.833 0.00 0.00 44.23 2.92
6216 6619 5.932619 TTAGCTTACTGCCACTTCATCTA 57.067 39.130 0.00 0.00 44.23 1.98
6218 6621 4.701765 AGCTTACTGCCACTTCATCTATG 58.298 43.478 0.00 0.00 44.23 2.23
6260 6663 3.135530 GGTTCTGTGATGCCCTTATCTCT 59.864 47.826 0.00 0.00 0.00 3.10
6266 6669 4.529769 TGTGATGCCCTTATCTCTATCAGG 59.470 45.833 0.00 0.00 0.00 3.86
6279 6682 4.133078 CTCTATCAGGGAGGAAATTGCAC 58.867 47.826 0.00 0.00 0.00 4.57
6334 6737 7.259088 ACAATGTCCTGAAGGTAATCTACTT 57.741 36.000 0.00 0.00 36.34 2.24
6347 6750 3.992260 ATCTACTTCGAATGGTCTCCG 57.008 47.619 0.00 0.00 0.00 4.63
6348 6751 2.022195 TCTACTTCGAATGGTCTCCGG 58.978 52.381 0.00 0.00 0.00 5.14
6349 6752 1.749634 CTACTTCGAATGGTCTCCGGT 59.250 52.381 0.00 0.00 0.00 5.28
6350 6753 0.531200 ACTTCGAATGGTCTCCGGTC 59.469 55.000 0.00 0.00 0.00 4.79
6351 6754 0.818296 CTTCGAATGGTCTCCGGTCT 59.182 55.000 0.00 0.00 0.00 3.85
6352 6755 0.815734 TTCGAATGGTCTCCGGTCTC 59.184 55.000 0.00 0.00 0.00 3.36
6353 6756 0.034380 TCGAATGGTCTCCGGTCTCT 60.034 55.000 0.00 0.00 0.00 3.10
6354 6757 0.101399 CGAATGGTCTCCGGTCTCTG 59.899 60.000 0.00 0.00 0.00 3.35
6355 6758 1.187087 GAATGGTCTCCGGTCTCTGT 58.813 55.000 0.00 0.00 0.00 3.41
6356 6759 2.376109 GAATGGTCTCCGGTCTCTGTA 58.624 52.381 0.00 0.00 0.00 2.74
6379 6791 2.825205 CCAACAGTTTGAGCTTTTGGG 58.175 47.619 5.23 0.00 40.67 4.12
6389 6801 1.683385 GAGCTTTTGGGCTGAACTGTT 59.317 47.619 0.00 0.00 43.20 3.16
6408 6820 2.442212 TTGGTGCATGCAACTCAATG 57.558 45.000 34.07 0.00 34.17 2.82
6533 6946 1.883084 GGAGTATGCTGCGTTCCCG 60.883 63.158 0.00 0.00 37.07 5.14
6611 7024 2.816087 AGCCTTCACACATTGCTTACAG 59.184 45.455 0.00 0.00 0.00 2.74
6902 7315 2.158652 TCTCCTGTATCCTCTGTACCCG 60.159 54.545 0.00 0.00 0.00 5.28
6991 7414 7.282585 TCTGAATACAGGACAAATAATGGAGG 58.717 38.462 0.00 0.00 43.60 4.30
6995 7418 5.520748 ACAGGACAAATAATGGAGGTCTT 57.479 39.130 0.00 0.00 0.00 3.01
7040 7463 9.503399 ACACGGAAAGAAAATCTAGTTATTCTT 57.497 29.630 11.16 11.16 42.30 2.52
7103 7526 2.426842 GAGCCTAAAGGTCAGCCATT 57.573 50.000 0.00 0.00 42.81 3.16
7104 7527 2.293170 GAGCCTAAAGGTCAGCCATTC 58.707 52.381 0.00 0.00 42.81 2.67
7157 7580 3.566351 AGTTAAATTATCAGCCTGCCCC 58.434 45.455 0.00 0.00 0.00 5.80
7163 7586 2.838436 TATCAGCCTGCCCCAGTGGA 62.838 60.000 11.95 0.00 35.39 4.02
7211 7634 4.286297 TCTAGTCACTTTGTCAATGGGG 57.714 45.455 1.19 0.00 0.00 4.96
7230 7653 4.478317 TGGGGATGCCATATATTTCTAGGG 59.522 45.833 5.30 0.00 0.00 3.53
7328 7751 7.074653 TCATACCAGACTGTTTTAAAGAGGT 57.925 36.000 6.79 0.00 0.00 3.85
7345 7768 9.573166 TTAAAGAGGTGAAGAATGAATTTGAGA 57.427 29.630 0.00 0.00 0.00 3.27
7348 7771 8.647256 AGAGGTGAAGAATGAATTTGAGATTT 57.353 30.769 0.00 0.00 0.00 2.17
7349 7772 8.738106 AGAGGTGAAGAATGAATTTGAGATTTC 58.262 33.333 0.00 0.00 0.00 2.17
7351 7774 9.086758 AGGTGAAGAATGAATTTGAGATTTCTT 57.913 29.630 0.00 0.00 36.44 2.52
7352 7775 9.702494 GGTGAAGAATGAATTTGAGATTTCTTT 57.298 29.630 0.00 0.00 34.52 2.52
7455 7878 6.775708 AGAGTAACTAGCATAAAACCACCAA 58.224 36.000 0.00 0.00 0.00 3.67
7460 7883 7.961325 AACTAGCATAAAACCACCAAAATTG 57.039 32.000 0.00 0.00 0.00 2.32
7466 7889 2.618442 AACCACCAAAATTGTGGCTG 57.382 45.000 15.07 11.56 43.00 4.85
7503 7930 2.213513 AAAAACACCGGCCCATGGG 61.214 57.895 27.87 27.87 38.57 4.00
7523 7950 3.938963 GGGTAATGATCGAGCAAAGACAA 59.061 43.478 7.76 0.00 0.00 3.18
7542 7969 3.655481 CCAAACTGACGTGGGAGC 58.345 61.111 0.00 0.00 0.00 4.70
7543 7970 1.966451 CCAAACTGACGTGGGAGCC 60.966 63.158 0.00 0.00 0.00 4.70
7544 7971 2.030562 AAACTGACGTGGGAGCCG 59.969 61.111 0.00 0.00 0.00 5.52
7545 7972 4.681978 AACTGACGTGGGAGCCGC 62.682 66.667 0.00 0.00 0.00 6.53
7547 7974 4.379243 CTGACGTGGGAGCCGCTT 62.379 66.667 0.00 0.00 0.00 4.68
7548 7975 4.680237 TGACGTGGGAGCCGCTTG 62.680 66.667 0.00 0.00 0.00 4.01
7549 7976 4.681978 GACGTGGGAGCCGCTTGT 62.682 66.667 0.00 0.00 0.00 3.16
7550 7977 4.250305 ACGTGGGAGCCGCTTGTT 62.250 61.111 0.00 0.00 0.00 2.83
7551 7978 2.047655 CGTGGGAGCCGCTTGTTA 60.048 61.111 0.00 0.00 0.00 2.41
7552 7979 2.100631 CGTGGGAGCCGCTTGTTAG 61.101 63.158 0.00 0.00 0.00 2.34
7553 7980 1.295423 GTGGGAGCCGCTTGTTAGA 59.705 57.895 0.00 0.00 0.00 2.10
7554 7981 0.741221 GTGGGAGCCGCTTGTTAGAG 60.741 60.000 0.00 0.00 0.00 2.43
7555 7982 1.815840 GGGAGCCGCTTGTTAGAGC 60.816 63.158 0.00 0.00 39.29 4.09
7556 7983 1.079127 GGAGCCGCTTGTTAGAGCA 60.079 57.895 0.00 0.00 42.83 4.26
7557 7984 0.462759 GGAGCCGCTTGTTAGAGCAT 60.463 55.000 0.00 0.00 42.83 3.79
7558 7985 0.933796 GAGCCGCTTGTTAGAGCATC 59.066 55.000 0.00 0.00 42.83 3.91
7572 7999 1.736681 GAGCATCTCCACTTGTTCAGC 59.263 52.381 0.00 0.00 0.00 4.26
7573 8000 0.807496 GCATCTCCACTTGTTCAGCC 59.193 55.000 0.00 0.00 0.00 4.85
7574 8001 1.457346 CATCTCCACTTGTTCAGCCC 58.543 55.000 0.00 0.00 0.00 5.19
7575 8002 0.329596 ATCTCCACTTGTTCAGCCCC 59.670 55.000 0.00 0.00 0.00 5.80
7576 8003 1.303643 CTCCACTTGTTCAGCCCCC 60.304 63.158 0.00 0.00 0.00 5.40
7609 8036 3.694538 CGCTTTTTGGGCCCTGGG 61.695 66.667 25.70 8.86 0.00 4.45
7610 8037 3.321648 GCTTTTTGGGCCCTGGGG 61.322 66.667 25.70 10.51 38.57 4.96
7612 8039 3.452919 TTTTTGGGCCCTGGGGGT 61.453 61.111 25.70 0.00 46.51 4.95
7613 8040 3.783239 TTTTTGGGCCCTGGGGGTG 62.783 63.158 25.70 0.00 46.51 4.61
7618 8045 2.039831 GGCCCTGGGGGTGATCTA 60.040 66.667 16.03 0.00 46.51 1.98
7619 8046 2.150051 GGCCCTGGGGGTGATCTAG 61.150 68.421 16.03 0.00 46.51 2.43
7620 8047 1.384643 GCCCTGGGGGTGATCTAGT 60.385 63.158 16.03 0.00 46.51 2.57
7621 8048 0.988678 GCCCTGGGGGTGATCTAGTT 60.989 60.000 16.03 0.00 46.51 2.24
7622 8049 1.132500 CCCTGGGGGTGATCTAGTTC 58.868 60.000 4.27 0.00 38.25 3.01
7623 8050 1.132500 CCTGGGGGTGATCTAGTTCC 58.868 60.000 0.00 0.00 0.00 3.62
7624 8051 1.132500 CTGGGGGTGATCTAGTTCCC 58.868 60.000 0.00 0.00 39.22 3.97
7625 8052 0.419865 TGGGGGTGATCTAGTTCCCA 59.580 55.000 13.13 0.00 41.63 4.37
7626 8053 1.132500 GGGGGTGATCTAGTTCCCAG 58.868 60.000 13.13 0.00 41.51 4.45
7627 8054 0.470341 GGGGTGATCTAGTTCCCAGC 59.530 60.000 13.13 0.00 41.51 4.85
7628 8055 0.470341 GGGTGATCTAGTTCCCAGCC 59.530 60.000 0.00 0.00 39.68 4.85
7629 8056 1.204146 GGTGATCTAGTTCCCAGCCA 58.796 55.000 0.00 0.00 0.00 4.75
7630 8057 1.134371 GGTGATCTAGTTCCCAGCCAC 60.134 57.143 0.00 0.00 0.00 5.01
7631 8058 0.824109 TGATCTAGTTCCCAGCCACG 59.176 55.000 0.00 0.00 0.00 4.94
7632 8059 0.530870 GATCTAGTTCCCAGCCACGC 60.531 60.000 0.00 0.00 0.00 5.34
7633 8060 1.972660 ATCTAGTTCCCAGCCACGCC 61.973 60.000 0.00 0.00 0.00 5.68
7634 8061 3.682292 CTAGTTCCCAGCCACGCCC 62.682 68.421 0.00 0.00 0.00 6.13
7641 8068 4.015406 CAGCCACGCCCACAGGTA 62.015 66.667 0.00 0.00 34.57 3.08
7642 8069 3.246112 AGCCACGCCCACAGGTAA 61.246 61.111 0.00 0.00 34.57 2.85
7643 8070 2.281900 GCCACGCCCACAGGTAAA 60.282 61.111 0.00 0.00 34.57 2.01
7644 8071 2.622962 GCCACGCCCACAGGTAAAC 61.623 63.158 0.00 0.00 34.57 2.01
7645 8072 1.969589 CCACGCCCACAGGTAAACC 60.970 63.158 0.00 0.00 34.57 3.27
7655 8082 3.030415 AGGTAAACCTGGGCAAACG 57.970 52.632 0.00 0.00 46.55 3.60
7656 8083 0.184211 AGGTAAACCTGGGCAAACGT 59.816 50.000 0.00 0.00 46.55 3.99
7657 8084 0.594602 GGTAAACCTGGGCAAACGTC 59.405 55.000 0.00 0.00 0.00 4.34
7658 8085 0.236449 GTAAACCTGGGCAAACGTCG 59.764 55.000 0.00 0.00 0.00 5.12
7659 8086 0.885596 TAAACCTGGGCAAACGTCGG 60.886 55.000 0.00 0.00 0.00 4.79
7660 8087 4.636435 ACCTGGGCAAACGTCGGG 62.636 66.667 0.00 0.00 0.00 5.14
7688 8115 3.638316 TTTCGGGCCGGGCTTGTA 61.638 61.111 28.80 11.81 0.00 2.41
7689 8116 3.193469 TTTCGGGCCGGGCTTGTAA 62.193 57.895 28.80 16.98 0.00 2.41
7690 8117 2.693896 TTTCGGGCCGGGCTTGTAAA 62.694 55.000 28.80 18.44 0.00 2.01
7691 8118 2.673687 CGGGCCGGGCTTGTAAAA 60.674 61.111 28.80 0.00 0.00 1.52
7692 8119 2.696759 CGGGCCGGGCTTGTAAAAG 61.697 63.158 28.80 5.53 0.00 2.27
7693 8120 2.571757 GGCCGGGCTTGTAAAAGC 59.428 61.111 22.87 9.32 44.76 3.51
7700 8127 2.942641 GCTTGTAAAAGCCCGACCT 58.057 52.632 6.34 0.00 39.81 3.85
7701 8128 1.244816 GCTTGTAAAAGCCCGACCTT 58.755 50.000 6.34 0.00 39.81 3.50
7702 8129 1.199327 GCTTGTAAAAGCCCGACCTTC 59.801 52.381 6.34 0.00 39.81 3.46
7703 8130 2.500229 CTTGTAAAAGCCCGACCTTCA 58.500 47.619 0.00 0.00 0.00 3.02
7704 8131 2.871096 TGTAAAAGCCCGACCTTCAT 57.129 45.000 0.00 0.00 0.00 2.57
7705 8132 3.149005 TGTAAAAGCCCGACCTTCATT 57.851 42.857 0.00 0.00 0.00 2.57
7706 8133 3.492337 TGTAAAAGCCCGACCTTCATTT 58.508 40.909 0.00 0.00 0.00 2.32
7707 8134 3.504520 TGTAAAAGCCCGACCTTCATTTC 59.495 43.478 0.00 0.00 0.00 2.17
7708 8135 2.586648 AAAGCCCGACCTTCATTTCT 57.413 45.000 0.00 0.00 0.00 2.52
7709 8136 2.115343 AAGCCCGACCTTCATTTCTC 57.885 50.000 0.00 0.00 0.00 2.87
7710 8137 0.984230 AGCCCGACCTTCATTTCTCA 59.016 50.000 0.00 0.00 0.00 3.27
7711 8138 1.351017 AGCCCGACCTTCATTTCTCAA 59.649 47.619 0.00 0.00 0.00 3.02
7712 8139 1.740025 GCCCGACCTTCATTTCTCAAG 59.260 52.381 0.00 0.00 0.00 3.02
7713 8140 2.876079 GCCCGACCTTCATTTCTCAAGT 60.876 50.000 0.00 0.00 0.00 3.16
7714 8141 3.003480 CCCGACCTTCATTTCTCAAGTC 58.997 50.000 0.00 0.00 0.00 3.01
7715 8142 3.307059 CCCGACCTTCATTTCTCAAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
7716 8143 3.681897 CCGACCTTCATTTCTCAAGTCTG 59.318 47.826 0.00 0.00 0.00 3.51
7717 8144 4.560128 CGACCTTCATTTCTCAAGTCTGA 58.440 43.478 0.00 0.00 0.00 3.27
7724 8151 2.125350 CTCAAGTCTGAGCCCGGC 60.125 66.667 0.00 0.00 42.66 6.13
7725 8152 3.672295 CTCAAGTCTGAGCCCGGCC 62.672 68.421 5.55 0.00 42.66 6.13
7726 8153 4.785453 CAAGTCTGAGCCCGGCCC 62.785 72.222 5.55 0.00 0.00 5.80
7740 8167 3.417601 GCCCGAAGCCCGAAATAC 58.582 61.111 0.00 0.00 41.76 1.89
7741 8168 1.153229 GCCCGAAGCCCGAAATACT 60.153 57.895 0.00 0.00 41.76 2.12
7742 8169 1.158484 GCCCGAAGCCCGAAATACTC 61.158 60.000 0.00 0.00 41.76 2.59
7743 8170 0.532196 CCCGAAGCCCGAAATACTCC 60.532 60.000 0.00 0.00 41.76 3.85
7744 8171 0.532196 CCGAAGCCCGAAATACTCCC 60.532 60.000 0.00 0.00 41.76 4.30
7745 8172 0.464452 CGAAGCCCGAAATACTCCCT 59.536 55.000 0.00 0.00 41.76 4.20
7746 8173 1.806623 CGAAGCCCGAAATACTCCCTG 60.807 57.143 0.00 0.00 41.76 4.45
7747 8174 1.485066 GAAGCCCGAAATACTCCCTGA 59.515 52.381 0.00 0.00 0.00 3.86
7748 8175 1.807814 AGCCCGAAATACTCCCTGAT 58.192 50.000 0.00 0.00 0.00 2.90
7749 8176 2.127708 AGCCCGAAATACTCCCTGATT 58.872 47.619 0.00 0.00 0.00 2.57
7750 8177 2.509964 AGCCCGAAATACTCCCTGATTT 59.490 45.455 0.00 0.00 0.00 2.17
7751 8178 2.879026 GCCCGAAATACTCCCTGATTTC 59.121 50.000 0.00 0.00 38.26 2.17
7752 8179 3.684413 GCCCGAAATACTCCCTGATTTCA 60.684 47.826 7.80 0.00 40.55 2.69
7753 8180 4.523083 CCCGAAATACTCCCTGATTTCAA 58.477 43.478 7.80 0.00 40.55 2.69
7754 8181 4.576463 CCCGAAATACTCCCTGATTTCAAG 59.424 45.833 7.80 0.00 40.55 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.014230 GGGCTGGCTAGAAATAATTATTGTTGA 59.986 37.037 11.42 0.00 0.00 3.18
1 2 7.014615 AGGGCTGGCTAGAAATAATTATTGTTG 59.985 37.037 11.42 5.05 0.00 3.33
2 3 7.014615 CAGGGCTGGCTAGAAATAATTATTGTT 59.985 37.037 11.42 5.84 0.00 2.83
100 101 0.748450 CCAACCTCCGTCCGCTATTA 59.252 55.000 0.00 0.00 0.00 0.98
101 102 1.262640 ACCAACCTCCGTCCGCTATT 61.263 55.000 0.00 0.00 0.00 1.73
102 103 1.684734 ACCAACCTCCGTCCGCTAT 60.685 57.895 0.00 0.00 0.00 2.97
331 335 1.120530 TTAGATCCGGTCCAGGAAGC 58.879 55.000 0.00 3.28 44.50 3.86
334 338 2.039418 CATGTTAGATCCGGTCCAGGA 58.961 52.381 0.00 5.13 45.54 3.86
348 352 1.522806 GCCGACGGGATGCATGTTA 60.523 57.895 17.22 0.00 34.06 2.41
455 459 2.439519 CCTGCCGGGCCGTATTTT 60.440 61.111 26.32 0.00 0.00 1.82
470 475 1.260538 TTCTGTGGAGATCGCTGCCT 61.261 55.000 0.00 0.00 0.00 4.75
576 581 0.106116 GGAGGGAGGGACGACACTAT 60.106 60.000 0.00 0.00 0.00 2.12
577 582 1.305623 GGAGGGAGGGACGACACTA 59.694 63.158 0.00 0.00 0.00 2.74
578 583 2.037527 GGAGGGAGGGACGACACT 59.962 66.667 0.00 0.00 0.00 3.55
579 584 3.075641 GGGAGGGAGGGACGACAC 61.076 72.222 0.00 0.00 0.00 3.67
586 591 4.924187 ATCGAGCGGGAGGGAGGG 62.924 72.222 0.00 0.00 0.00 4.30
587 592 3.299190 GATCGAGCGGGAGGGAGG 61.299 72.222 0.00 0.00 0.00 4.30
588 593 3.299190 GGATCGAGCGGGAGGGAG 61.299 72.222 0.00 0.00 0.00 4.30
615 620 1.756950 TCGGGAGGAAGACGATGGG 60.757 63.158 0.00 0.00 0.00 4.00
616 621 1.437986 GTCGGGAGGAAGACGATGG 59.562 63.158 0.00 0.00 38.99 3.51
667 672 2.193536 GCCACAGAAACGGGCAAGT 61.194 57.895 0.00 0.00 46.92 3.16
952 974 2.772191 CGGGGATGGATGGGGTGA 60.772 66.667 0.00 0.00 0.00 4.02
988 1010 1.051812 CGCTCCATTGGACTAGGGAT 58.948 55.000 0.00 0.00 0.00 3.85
993 1015 2.202878 GCGCGCTCCATTGGACTA 60.203 61.111 26.67 0.00 0.00 2.59
1476 1720 0.107654 CGGGGTTCTCCATGAGGTTC 60.108 60.000 0.00 0.00 37.22 3.62
1545 1789 1.210413 GTTGAGCAGCGACTCGAGA 59.790 57.895 21.68 0.00 39.68 4.04
1842 2086 4.741239 TCCAGCACCTCCCCCTCC 62.741 72.222 0.00 0.00 0.00 4.30
2225 2469 5.281693 TGAAAATTGTGCTGTCACTATCG 57.718 39.130 4.39 0.00 43.49 2.92
2236 2480 7.493313 CACGAACTCTTAAATGAAAATTGTGC 58.507 34.615 0.00 0.00 0.00 4.57
2246 2490 5.168569 TCAGGTAGCACGAACTCTTAAATG 58.831 41.667 0.00 0.00 0.00 2.32
2328 2584 1.759994 CGAGCAACGCCTATAGAGTG 58.240 55.000 0.00 0.92 34.51 3.51
2358 2616 4.248859 CATGGTAGACAGCATACATAGCC 58.751 47.826 0.00 0.00 40.90 3.93
2361 2619 3.007940 GCCCATGGTAGACAGCATACATA 59.992 47.826 11.73 0.00 40.90 2.29
2532 2790 2.034066 CTTTTGCGGGCCTCCTCA 59.966 61.111 0.84 0.00 0.00 3.86
2549 2807 1.352156 AACGCGAAGGTTCATCTCGC 61.352 55.000 15.93 5.65 44.99 5.03
2628 2892 3.747099 AATGCTCGAAACTCGGAATTG 57.253 42.857 0.00 0.00 40.88 2.32
2634 2898 6.247165 CACTCAAAATTAATGCTCGAAACTCG 59.753 38.462 0.00 0.00 42.10 4.18
2803 3068 2.819608 CCAGAACATCATTTGGAACCGT 59.180 45.455 0.00 0.00 32.34 4.83
2805 3070 2.562298 TGCCAGAACATCATTTGGAACC 59.438 45.455 0.00 0.00 32.34 3.62
2806 3071 3.940209 TGCCAGAACATCATTTGGAAC 57.060 42.857 0.00 0.00 32.34 3.62
2809 3074 3.663995 TGTTGCCAGAACATCATTTGG 57.336 42.857 0.00 0.00 0.00 3.28
2810 3075 3.426191 CGTTGTTGCCAGAACATCATTTG 59.574 43.478 0.00 0.00 0.00 2.32
2893 3158 4.081030 CTGTCGCGCACAAGGCTG 62.081 66.667 8.75 0.00 41.67 4.85
3061 3327 4.894705 TGCAAGGCCACAACATATATTCAT 59.105 37.500 5.01 0.00 0.00 2.57
3221 3487 3.270027 CATGTTGGCGAACTTAGGATCA 58.730 45.455 13.01 0.00 32.79 2.92
3227 3493 0.878416 GGTGCATGTTGGCGAACTTA 59.122 50.000 13.01 0.00 36.28 2.24
3510 3780 2.287915 ACAAAGCAACAGAACTAGCACG 59.712 45.455 0.00 0.00 0.00 5.34
3538 3808 4.096532 TGCACATGGTTCGTAAACAAAGAA 59.903 37.500 0.00 0.00 37.10 2.52
3767 4037 5.717178 ACCCTCATATTGACAGAGCGTATAT 59.283 40.000 0.00 0.00 0.00 0.86
3768 4038 5.077564 ACCCTCATATTGACAGAGCGTATA 58.922 41.667 0.00 0.00 0.00 1.47
3769 4039 3.898123 ACCCTCATATTGACAGAGCGTAT 59.102 43.478 0.00 0.00 0.00 3.06
3881 4167 1.490490 TCCTAATGGCTCCATCACACC 59.510 52.381 1.31 0.00 35.31 4.16
3894 4180 3.871485 AGAAGCTGCAAGTCTCCTAATG 58.129 45.455 1.02 0.00 35.30 1.90
3939 4244 5.742255 GCGGTAATTCTAGCCCTGAATAGTT 60.742 44.000 0.00 0.00 34.19 2.24
3945 4250 1.491668 TGCGGTAATTCTAGCCCTGA 58.508 50.000 0.00 0.00 0.00 3.86
3989 4296 3.455910 TGCATGAAAGGAGGCAGTATAGT 59.544 43.478 0.00 0.00 0.00 2.12
4135 4442 6.071984 TCAAATAGCTTCCCACAAAAGGTTA 58.928 36.000 0.00 0.00 36.06 2.85
4244 4552 9.543783 TCACTTTCTTAAAAGAAGAGTTACTCC 57.456 33.333 8.96 0.00 45.01 3.85
4264 4572 8.594550 TCCAAGTAAGCTACTCTTAATCACTTT 58.405 33.333 0.00 0.00 38.86 2.66
4280 4588 5.783111 ACATTTTCCATGTTCCAAGTAAGC 58.217 37.500 0.00 0.00 0.00 3.09
4325 4637 9.280174 ACAAAATGATGCAAAGATTTCTTCAAT 57.720 25.926 0.00 0.00 34.61 2.57
4326 4638 8.552865 CACAAAATGATGCAAAGATTTCTTCAA 58.447 29.630 0.00 0.00 34.61 2.69
4327 4639 7.307514 GCACAAAATGATGCAAAGATTTCTTCA 60.308 33.333 0.00 0.00 41.65 3.02
4334 4646 4.274602 TGGCACAAAATGATGCAAAGAT 57.725 36.364 0.00 0.00 43.93 2.40
4575 4958 5.090652 TGTAGTTCGCAATTTTGTCAGAC 57.909 39.130 0.00 0.00 0.00 3.51
4705 5089 7.355101 ACACTTATGTTAGGATGGAGAGAGTA 58.645 38.462 0.00 0.00 34.46 2.59
4706 5090 6.198639 ACACTTATGTTAGGATGGAGAGAGT 58.801 40.000 0.00 0.00 34.46 3.24
4707 5091 6.549364 AGACACTTATGTTAGGATGGAGAGAG 59.451 42.308 0.00 0.00 39.95 3.20
4708 5092 6.436027 AGACACTTATGTTAGGATGGAGAGA 58.564 40.000 0.00 0.00 39.95 3.10
4709 5093 6.322456 TGAGACACTTATGTTAGGATGGAGAG 59.678 42.308 0.00 0.00 39.95 3.20
4710 5094 6.194967 TGAGACACTTATGTTAGGATGGAGA 58.805 40.000 0.00 0.00 39.95 3.71
4711 5095 6.471233 TGAGACACTTATGTTAGGATGGAG 57.529 41.667 0.00 0.00 39.95 3.86
4712 5096 6.440647 AGTTGAGACACTTATGTTAGGATGGA 59.559 38.462 0.00 0.00 39.95 3.41
4713 5097 6.644347 AGTTGAGACACTTATGTTAGGATGG 58.356 40.000 0.00 0.00 39.95 3.51
4714 5098 8.446273 CAAAGTTGAGACACTTATGTTAGGATG 58.554 37.037 0.00 0.00 39.95 3.51
4715 5099 8.157476 ACAAAGTTGAGACACTTATGTTAGGAT 58.843 33.333 0.00 0.00 39.95 3.24
4716 5100 7.506114 ACAAAGTTGAGACACTTATGTTAGGA 58.494 34.615 0.00 0.00 39.95 2.94
4717 5101 7.730364 ACAAAGTTGAGACACTTATGTTAGG 57.270 36.000 0.00 0.00 39.95 2.69
4718 5102 9.477484 AGTACAAAGTTGAGACACTTATGTTAG 57.523 33.333 0.00 0.00 39.95 2.34
4720 5104 9.826574 TTAGTACAAAGTTGAGACACTTATGTT 57.173 29.630 0.00 0.00 39.95 2.71
4721 5105 9.257651 GTTAGTACAAAGTTGAGACACTTATGT 57.742 33.333 0.00 0.00 43.71 2.29
4722 5106 9.477484 AGTTAGTACAAAGTTGAGACACTTATG 57.523 33.333 0.00 0.00 35.87 1.90
4724 5108 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
4725 5109 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
4726 5110 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
4727 5111 9.310716 ACTAAAGTTAGTACAAAGTTGAGACAC 57.689 33.333 1.81 0.00 41.92 3.67
4753 5137 7.220683 GTGTCTCAACGTTAGTACAACTTTGTA 59.779 37.037 18.02 0.00 42.35 2.41
4754 5138 6.035327 GTGTCTCAACGTTAGTACAACTTTGT 59.965 38.462 18.02 0.00 44.86 2.83
4755 5139 6.255020 AGTGTCTCAACGTTAGTACAACTTTG 59.745 38.462 0.00 15.11 32.67 2.77
4756 5140 6.335777 AGTGTCTCAACGTTAGTACAACTTT 58.664 36.000 0.00 0.00 0.00 2.66
4757 5141 5.899299 AGTGTCTCAACGTTAGTACAACTT 58.101 37.500 0.00 0.00 0.00 2.66
4758 5142 5.511234 AGTGTCTCAACGTTAGTACAACT 57.489 39.130 0.00 0.00 0.00 3.16
4759 5143 7.864307 ATAAGTGTCTCAACGTTAGTACAAC 57.136 36.000 0.00 0.00 0.00 3.32
4760 5144 8.876275 AAATAAGTGTCTCAACGTTAGTACAA 57.124 30.769 0.00 0.00 0.00 2.41
4761 5145 8.876275 AAAATAAGTGTCTCAACGTTAGTACA 57.124 30.769 0.00 2.42 0.00 2.90
4763 5147 9.630098 CCTAAAATAAGTGTCTCAACGTTAGTA 57.370 33.333 0.00 0.00 0.00 1.82
4764 5148 8.362639 TCCTAAAATAAGTGTCTCAACGTTAGT 58.637 33.333 0.00 0.00 0.00 2.24
4765 5149 8.645487 GTCCTAAAATAAGTGTCTCAACGTTAG 58.355 37.037 0.00 0.00 0.00 2.34
4766 5150 8.143193 TGTCCTAAAATAAGTGTCTCAACGTTA 58.857 33.333 0.00 0.00 0.00 3.18
4767 5151 6.987992 TGTCCTAAAATAAGTGTCTCAACGTT 59.012 34.615 0.00 0.00 0.00 3.99
4768 5152 6.518493 TGTCCTAAAATAAGTGTCTCAACGT 58.482 36.000 0.00 0.00 0.00 3.99
4769 5153 6.866770 TCTGTCCTAAAATAAGTGTCTCAACG 59.133 38.462 0.00 0.00 0.00 4.10
4770 5154 8.603242 TTCTGTCCTAAAATAAGTGTCTCAAC 57.397 34.615 0.00 0.00 0.00 3.18
4771 5155 7.878127 CCTTCTGTCCTAAAATAAGTGTCTCAA 59.122 37.037 0.00 0.00 0.00 3.02
4772 5156 7.234782 TCCTTCTGTCCTAAAATAAGTGTCTCA 59.765 37.037 0.00 0.00 0.00 3.27
4773 5157 7.612677 TCCTTCTGTCCTAAAATAAGTGTCTC 58.387 38.462 0.00 0.00 0.00 3.36
4774 5158 7.235812 ACTCCTTCTGTCCTAAAATAAGTGTCT 59.764 37.037 0.00 0.00 0.00 3.41
4775 5159 7.387643 ACTCCTTCTGTCCTAAAATAAGTGTC 58.612 38.462 0.00 0.00 0.00 3.67
4776 5160 7.317722 ACTCCTTCTGTCCTAAAATAAGTGT 57.682 36.000 0.00 0.00 0.00 3.55
4777 5161 9.319143 CATACTCCTTCTGTCCTAAAATAAGTG 57.681 37.037 0.00 0.00 0.00 3.16
4778 5162 9.047947 ACATACTCCTTCTGTCCTAAAATAAGT 57.952 33.333 0.00 0.00 0.00 2.24
4779 5163 9.535878 GACATACTCCTTCTGTCCTAAAATAAG 57.464 37.037 0.00 0.00 34.55 1.73
4780 5164 9.268282 AGACATACTCCTTCTGTCCTAAAATAA 57.732 33.333 0.00 0.00 40.08 1.40
4781 5165 8.840200 AGACATACTCCTTCTGTCCTAAAATA 57.160 34.615 0.00 0.00 40.08 1.40
4782 5166 7.741554 AGACATACTCCTTCTGTCCTAAAAT 57.258 36.000 0.00 0.00 40.08 1.82
4783 5167 7.554959 AAGACATACTCCTTCTGTCCTAAAA 57.445 36.000 0.00 0.00 40.08 1.52
4784 5168 7.234782 TCAAAGACATACTCCTTCTGTCCTAAA 59.765 37.037 0.00 0.00 40.08 1.85
4785 5169 6.724441 TCAAAGACATACTCCTTCTGTCCTAA 59.276 38.462 0.00 0.00 40.08 2.69
4786 5170 6.253758 TCAAAGACATACTCCTTCTGTCCTA 58.746 40.000 0.00 0.00 40.08 2.94
4787 5171 5.087323 TCAAAGACATACTCCTTCTGTCCT 58.913 41.667 0.00 0.00 40.08 3.85
4788 5172 5.046950 ACTCAAAGACATACTCCTTCTGTCC 60.047 44.000 0.00 0.00 40.08 4.02
4789 5173 6.031751 ACTCAAAGACATACTCCTTCTGTC 57.968 41.667 0.00 0.00 39.63 3.51
4790 5174 6.042093 TGAACTCAAAGACATACTCCTTCTGT 59.958 38.462 0.00 0.00 0.00 3.41
4791 5175 6.367422 GTGAACTCAAAGACATACTCCTTCTG 59.633 42.308 0.00 0.00 0.00 3.02
4792 5176 6.459923 GTGAACTCAAAGACATACTCCTTCT 58.540 40.000 0.00 0.00 0.00 2.85
4793 5177 5.639931 GGTGAACTCAAAGACATACTCCTTC 59.360 44.000 0.00 0.00 0.00 3.46
4794 5178 5.308237 AGGTGAACTCAAAGACATACTCCTT 59.692 40.000 0.00 0.00 0.00 3.36
4795 5179 4.841246 AGGTGAACTCAAAGACATACTCCT 59.159 41.667 0.00 0.00 0.00 3.69
4796 5180 4.932200 CAGGTGAACTCAAAGACATACTCC 59.068 45.833 0.00 0.00 0.00 3.85
4797 5181 5.784177 TCAGGTGAACTCAAAGACATACTC 58.216 41.667 0.00 0.00 0.00 2.59
4798 5182 5.808366 TCAGGTGAACTCAAAGACATACT 57.192 39.130 0.00 0.00 0.00 2.12
4862 5246 8.373981 AGATATCTGAAATTACCAGATCACAGG 58.626 37.037 20.16 0.00 45.36 4.00
4863 5247 9.421806 GAGATATCTGAAATTACCAGATCACAG 57.578 37.037 20.16 0.00 45.36 3.66
4903 5287 5.066968 GAGAACTGTCTTTCTCTGTAGGG 57.933 47.826 5.75 0.00 45.57 3.53
4914 5298 9.682465 AAAAAGTAGGTTAAAGAGAACTGTCTT 57.318 29.630 0.00 0.00 38.48 3.01
5194 5584 1.098050 GACAGCAGGCCACCAAATAG 58.902 55.000 5.01 0.00 0.00 1.73
5375 5766 5.277876 CCAAATTAGTCTGATGATGCAGCTC 60.278 44.000 2.53 0.00 35.86 4.09
5380 5771 4.906065 TGCCAAATTAGTCTGATGATGC 57.094 40.909 0.00 0.00 0.00 3.91
5384 5775 9.459640 CTAATGAATTGCCAAATTAGTCTGATG 57.540 33.333 1.01 0.00 36.10 3.07
5434 5825 0.974383 GAGGGTCGGTTTTCTCAGGA 59.026 55.000 0.00 0.00 0.00 3.86
5623 6016 6.842437 TTTTAGTAAAGGCCATGCAATGTA 57.158 33.333 5.01 0.00 44.81 2.29
5657 6052 6.239515 GGAGGGAGTAGAAAAGTAGTTCAACA 60.240 42.308 0.00 0.00 0.00 3.33
5675 6070 5.681639 ACAATTATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
5676 6071 5.427481 AGACAATTATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
5677 6072 5.681639 AGACAATTATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
5678 6073 7.553044 AGAAAGACAATTATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
5679 6074 8.494016 AGAAAGACAATTATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
5680 6075 9.595823 CTAGAAAGACAATTATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
5681 6076 8.336080 GCTAGAAAGACAATTATTTAGGAACGG 58.664 37.037 0.00 0.00 0.00 4.44
5682 6077 9.099454 AGCTAGAAAGACAATTATTTAGGAACG 57.901 33.333 0.00 0.00 0.00 3.95
5693 6088 9.896645 TCATTTGAGATAGCTAGAAAGACAATT 57.103 29.630 0.00 0.00 0.00 2.32
5694 6089 9.896645 TTCATTTGAGATAGCTAGAAAGACAAT 57.103 29.630 0.00 0.00 0.00 2.71
5695 6090 9.155975 GTTCATTTGAGATAGCTAGAAAGACAA 57.844 33.333 0.00 0.00 0.00 3.18
5696 6091 8.535335 AGTTCATTTGAGATAGCTAGAAAGACA 58.465 33.333 0.00 0.00 0.00 3.41
5697 6092 8.940768 AGTTCATTTGAGATAGCTAGAAAGAC 57.059 34.615 0.00 0.00 0.00 3.01
5699 6094 9.809096 TGTAGTTCATTTGAGATAGCTAGAAAG 57.191 33.333 0.00 0.00 0.00 2.62
5701 6096 9.587772 GTTGTAGTTCATTTGAGATAGCTAGAA 57.412 33.333 0.00 0.00 0.00 2.10
5702 6097 8.749354 TGTTGTAGTTCATTTGAGATAGCTAGA 58.251 33.333 0.00 0.00 0.00 2.43
5703 6098 8.932945 TGTTGTAGTTCATTTGAGATAGCTAG 57.067 34.615 0.00 0.00 0.00 3.42
5705 6100 9.319143 GTATGTTGTAGTTCATTTGAGATAGCT 57.681 33.333 0.00 0.00 0.00 3.32
5706 6101 8.269424 CGTATGTTGTAGTTCATTTGAGATAGC 58.731 37.037 0.00 0.00 0.00 2.97
5707 6102 8.755941 CCGTATGTTGTAGTTCATTTGAGATAG 58.244 37.037 0.00 0.00 0.00 2.08
5708 6103 8.471609 TCCGTATGTTGTAGTTCATTTGAGATA 58.528 33.333 0.00 0.00 0.00 1.98
5709 6104 7.327975 TCCGTATGTTGTAGTTCATTTGAGAT 58.672 34.615 0.00 0.00 0.00 2.75
5710 6105 6.693466 TCCGTATGTTGTAGTTCATTTGAGA 58.307 36.000 0.00 0.00 0.00 3.27
5711 6106 6.961359 TCCGTATGTTGTAGTTCATTTGAG 57.039 37.500 0.00 0.00 0.00 3.02
5712 6107 6.876789 ACATCCGTATGTTGTAGTTCATTTGA 59.123 34.615 0.00 0.00 44.07 2.69
5713 6108 7.072177 ACATCCGTATGTTGTAGTTCATTTG 57.928 36.000 0.00 0.00 44.07 2.32
5714 6109 8.826710 CATACATCCGTATGTTGTAGTTCATTT 58.173 33.333 0.00 0.00 46.70 2.32
5715 6110 8.365399 CATACATCCGTATGTTGTAGTTCATT 57.635 34.615 0.00 0.00 46.70 2.57
5716 6111 7.946655 CATACATCCGTATGTTGTAGTTCAT 57.053 36.000 0.00 0.00 46.70 2.57
5728 6123 9.692749 CTAAAACATGTCTACATACATCCGTAT 57.307 33.333 0.00 0.00 38.01 3.06
5729 6124 8.905850 TCTAAAACATGTCTACATACATCCGTA 58.094 33.333 0.00 0.00 38.01 4.02
5730 6125 7.778083 TCTAAAACATGTCTACATACATCCGT 58.222 34.615 0.00 0.00 38.01 4.69
5731 6126 7.921214 ACTCTAAAACATGTCTACATACATCCG 59.079 37.037 0.00 0.00 38.01 4.18
5732 6127 9.035607 CACTCTAAAACATGTCTACATACATCC 57.964 37.037 0.00 0.00 38.01 3.51
5733 6128 9.587772 ACACTCTAAAACATGTCTACATACATC 57.412 33.333 0.00 0.00 38.01 3.06
5739 6134 9.856488 GAATCTACACTCTAAAACATGTCTACA 57.144 33.333 0.00 0.00 0.00 2.74
5740 6135 9.856488 TGAATCTACACTCTAAAACATGTCTAC 57.144 33.333 0.00 0.00 0.00 2.59
5741 6136 9.856488 GTGAATCTACACTCTAAAACATGTCTA 57.144 33.333 0.00 0.00 37.73 2.59
5742 6137 8.589338 AGTGAATCTACACTCTAAAACATGTCT 58.411 33.333 0.00 0.00 46.36 3.41
5743 6138 8.764524 AGTGAATCTACACTCTAAAACATGTC 57.235 34.615 0.00 0.00 46.36 3.06
5756 6151 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5757 6152 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
5758 6153 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5759 6154 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
5760 6155 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
5761 6156 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
5762 6157 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
5763 6158 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
5764 6159 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
5765 6160 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
5766 6161 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
5767 6162 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
5768 6163 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
5769 6164 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
5770 6165 6.374333 ACAAATGACTACATACGGAGCAAAAT 59.626 34.615 0.00 0.00 35.50 1.82
5771 6166 5.703592 ACAAATGACTACATACGGAGCAAAA 59.296 36.000 0.00 0.00 35.50 2.44
5772 6167 5.242434 ACAAATGACTACATACGGAGCAAA 58.758 37.500 0.00 0.00 35.50 3.68
5773 6168 4.827692 ACAAATGACTACATACGGAGCAA 58.172 39.130 0.00 0.00 35.50 3.91
5774 6169 4.465632 ACAAATGACTACATACGGAGCA 57.534 40.909 0.00 0.00 35.50 4.26
5775 6170 4.868171 TCAACAAATGACTACATACGGAGC 59.132 41.667 0.00 0.00 35.50 4.70
5776 6171 6.961359 TTCAACAAATGACTACATACGGAG 57.039 37.500 0.00 0.00 37.92 4.63
5777 6172 7.822334 AGATTTCAACAAATGACTACATACGGA 59.178 33.333 0.00 0.00 37.92 4.69
5778 6173 7.974675 AGATTTCAACAAATGACTACATACGG 58.025 34.615 0.00 0.00 37.92 4.02
5779 6174 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
5783 6178 9.996554 TTCTAGAGATTTCAACAAATGACTACA 57.003 29.630 0.00 0.00 37.92 2.74
5786 6181 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
5787 6182 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
5788 6183 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
5803 6198 9.595823 CCGTTCCTAAATAATTGTCTTTCTAGA 57.404 33.333 0.00 0.00 0.00 2.43
5804 6199 9.595823 TCCGTTCCTAAATAATTGTCTTTCTAG 57.404 33.333 0.00 0.00 0.00 2.43
5805 6200 9.595823 CTCCGTTCCTAAATAATTGTCTTTCTA 57.404 33.333 0.00 0.00 0.00 2.10
5806 6201 7.553044 CCTCCGTTCCTAAATAATTGTCTTTCT 59.447 37.037 0.00 0.00 0.00 2.52
5807 6202 7.551617 TCCTCCGTTCCTAAATAATTGTCTTTC 59.448 37.037 0.00 0.00 0.00 2.62
5808 6203 7.399634 TCCTCCGTTCCTAAATAATTGTCTTT 58.600 34.615 0.00 0.00 0.00 2.52
5809 6204 6.954232 TCCTCCGTTCCTAAATAATTGTCTT 58.046 36.000 0.00 0.00 0.00 3.01
5810 6205 6.555463 TCCTCCGTTCCTAAATAATTGTCT 57.445 37.500 0.00 0.00 0.00 3.41
5811 6206 6.822170 ACTTCCTCCGTTCCTAAATAATTGTC 59.178 38.462 0.00 0.00 0.00 3.18
5812 6207 6.718294 ACTTCCTCCGTTCCTAAATAATTGT 58.282 36.000 0.00 0.00 0.00 2.71
5813 6208 8.726870 TTACTTCCTCCGTTCCTAAATAATTG 57.273 34.615 0.00 0.00 0.00 2.32
5816 6211 9.991906 CATATTACTTCCTCCGTTCCTAAATAA 57.008 33.333 0.00 0.00 0.00 1.40
5817 6212 9.151177 ACATATTACTTCCTCCGTTCCTAAATA 57.849 33.333 0.00 0.00 0.00 1.40
5818 6213 8.030913 ACATATTACTTCCTCCGTTCCTAAAT 57.969 34.615 0.00 0.00 0.00 1.40
5819 6214 7.427989 ACATATTACTTCCTCCGTTCCTAAA 57.572 36.000 0.00 0.00 0.00 1.85
5820 6215 8.416329 GTTACATATTACTTCCTCCGTTCCTAA 58.584 37.037 0.00 0.00 0.00 2.69
5821 6216 7.255242 CGTTACATATTACTTCCTCCGTTCCTA 60.255 40.741 0.00 0.00 0.00 2.94
5822 6217 6.460676 CGTTACATATTACTTCCTCCGTTCCT 60.461 42.308 0.00 0.00 0.00 3.36
5823 6218 5.689068 CGTTACATATTACTTCCTCCGTTCC 59.311 44.000 0.00 0.00 0.00 3.62
5824 6219 6.498304 TCGTTACATATTACTTCCTCCGTTC 58.502 40.000 0.00 0.00 0.00 3.95
5825 6220 6.455360 TCGTTACATATTACTTCCTCCGTT 57.545 37.500 0.00 0.00 0.00 4.44
5826 6221 6.455360 TTCGTTACATATTACTTCCTCCGT 57.545 37.500 0.00 0.00 0.00 4.69
5827 6222 7.941795 AATTCGTTACATATTACTTCCTCCG 57.058 36.000 0.00 0.00 0.00 4.63
5828 6223 9.931210 CAAAATTCGTTACATATTACTTCCTCC 57.069 33.333 0.00 0.00 0.00 4.30
5829 6224 9.434559 GCAAAATTCGTTACATATTACTTCCTC 57.565 33.333 0.00 0.00 0.00 3.71
5830 6225 8.952278 TGCAAAATTCGTTACATATTACTTCCT 58.048 29.630 0.00 0.00 0.00 3.36
5831 6226 9.221775 CTGCAAAATTCGTTACATATTACTTCC 57.778 33.333 0.00 0.00 0.00 3.46
5832 6227 9.982291 TCTGCAAAATTCGTTACATATTACTTC 57.018 29.630 0.00 0.00 0.00 3.01
5837 6232 8.911662 GTGTTTCTGCAAAATTCGTTACATATT 58.088 29.630 0.00 0.00 0.00 1.28
5838 6233 8.296713 AGTGTTTCTGCAAAATTCGTTACATAT 58.703 29.630 0.00 0.00 0.00 1.78
5839 6234 7.644490 AGTGTTTCTGCAAAATTCGTTACATA 58.356 30.769 0.00 0.00 0.00 2.29
5840 6235 6.503524 AGTGTTTCTGCAAAATTCGTTACAT 58.496 32.000 0.00 0.00 0.00 2.29
5850 6245 1.950909 CCGGGTAGTGTTTCTGCAAAA 59.049 47.619 0.00 0.00 0.00 2.44
5852 6247 0.470766 ACCGGGTAGTGTTTCTGCAA 59.529 50.000 6.32 0.00 0.00 4.08
5869 6264 2.249844 TGACTCCACGGAAAAGAACC 57.750 50.000 0.00 0.00 0.00 3.62
5921 6316 5.480205 GACAAGTACCTTGAACCCTCTTAG 58.520 45.833 10.73 0.00 43.42 2.18
5969 6364 6.902224 TGTGACTTGATATGGATAAACACG 57.098 37.500 0.00 0.00 0.00 4.49
5987 6383 7.396540 AAATTTCCAAGATCCAGTATGTGAC 57.603 36.000 0.00 0.00 0.00 3.67
5992 6388 7.123247 CCTGTCAAAATTTCCAAGATCCAGTAT 59.877 37.037 0.00 0.00 0.00 2.12
5993 6389 6.434028 CCTGTCAAAATTTCCAAGATCCAGTA 59.566 38.462 0.00 0.00 0.00 2.74
6038 6434 3.257561 CGCTTCGCCACATCCTCG 61.258 66.667 0.00 0.00 0.00 4.63
6068 6464 1.079796 TGGTTGGTCCATGGAATCCA 58.920 50.000 18.20 18.09 41.93 3.41
6098 6494 3.719268 ATCATAAGTGTGCCTGGAACA 57.281 42.857 2.48 2.48 0.00 3.18
6131 6527 3.503748 ACATGCTTACCTTGCTTTCACTC 59.496 43.478 0.00 0.00 0.00 3.51
6176 6579 4.526262 AGCTAATGCAAACACCAACCATAA 59.474 37.500 0.00 0.00 42.74 1.90
6177 6580 4.085733 AGCTAATGCAAACACCAACCATA 58.914 39.130 0.00 0.00 42.74 2.74
6179 6582 2.315176 AGCTAATGCAAACACCAACCA 58.685 42.857 0.00 0.00 42.74 3.67
6180 6583 3.385193 AAGCTAATGCAAACACCAACC 57.615 42.857 0.00 0.00 42.74 3.77
6209 6612 3.632643 TCAGCCTGCAACATAGATGAA 57.367 42.857 0.00 0.00 0.00 2.57
6212 6615 3.641434 AGTTCAGCCTGCAACATAGAT 57.359 42.857 8.89 0.00 0.00 1.98
6214 6617 3.868077 GTCTAGTTCAGCCTGCAACATAG 59.132 47.826 8.89 7.74 0.00 2.23
6216 6619 2.038952 TGTCTAGTTCAGCCTGCAACAT 59.961 45.455 8.89 0.18 0.00 2.71
6218 6621 2.072298 CTGTCTAGTTCAGCCTGCAAC 58.928 52.381 0.00 0.00 0.00 4.17
6260 6663 3.371917 CCTGTGCAATTTCCTCCCTGATA 60.372 47.826 0.00 0.00 0.00 2.15
6266 6669 3.350219 TCTACCTGTGCAATTTCCTCC 57.650 47.619 0.00 0.00 0.00 4.30
6279 6682 3.507233 TCTGCTTTGCCATTTTCTACCTG 59.493 43.478 0.00 0.00 0.00 4.00
6334 6737 0.034380 AGAGACCGGAGACCATTCGA 60.034 55.000 9.46 0.00 0.00 3.71
6347 6750 3.487120 AACTGTTGGGTTACAGAGACC 57.513 47.619 10.46 0.00 46.72 3.85
6348 6751 4.448210 TCAAACTGTTGGGTTACAGAGAC 58.552 43.478 10.46 0.00 46.72 3.36
6349 6752 4.703897 CTCAAACTGTTGGGTTACAGAGA 58.296 43.478 10.46 4.98 46.72 3.10
6350 6753 3.251004 GCTCAAACTGTTGGGTTACAGAG 59.749 47.826 10.46 0.00 46.72 3.35
6351 6754 3.118038 AGCTCAAACTGTTGGGTTACAGA 60.118 43.478 10.46 0.00 46.72 3.41
6353 6756 3.290948 AGCTCAAACTGTTGGGTTACA 57.709 42.857 0.00 0.00 37.56 2.41
6354 6757 4.649088 AAAGCTCAAACTGTTGGGTTAC 57.351 40.909 0.00 0.00 37.56 2.50
6355 6758 5.004922 CAAAAGCTCAAACTGTTGGGTTA 57.995 39.130 0.00 0.00 37.56 2.85
6356 6759 3.860641 CAAAAGCTCAAACTGTTGGGTT 58.139 40.909 0.00 0.00 37.56 4.11
6379 6791 1.774639 CATGCACCAAACAGTTCAGC 58.225 50.000 0.00 0.00 0.00 4.26
6389 6801 1.001068 CCATTGAGTTGCATGCACCAA 59.999 47.619 22.58 22.94 0.00 3.67
6408 6820 4.044426 GTCAACTTTTCAGTTCATGTGCC 58.956 43.478 0.00 0.00 41.69 5.01
6569 6982 5.294552 GGCTTTGGAACTATCAGTACATGTC 59.705 44.000 0.00 0.00 0.00 3.06
6902 7315 2.440980 GGAATGGGGAGGCAGTGC 60.441 66.667 6.55 6.55 0.00 4.40
6995 7418 4.634004 CGTGTATGGCTAGGACATCAAAAA 59.366 41.667 0.00 0.00 31.56 1.94
7070 7493 5.163713 CCTTTAGGCTCAAGTTATCAACAGC 60.164 44.000 7.60 0.00 0.00 4.40
7157 7580 5.614308 TGCTTGGTAAGATGATATCCACTG 58.386 41.667 0.00 0.00 0.00 3.66
7211 7634 6.599638 GTGTTCCCCTAGAAATATATGGCATC 59.400 42.308 1.65 0.00 35.85 3.91
7353 7776 9.457436 GTTCCTACTTGAGGGTGATAAAATTAA 57.543 33.333 0.00 0.00 46.70 1.40
7356 7779 7.027874 TGTTCCTACTTGAGGGTGATAAAAT 57.972 36.000 0.00 0.00 46.70 1.82
7357 7780 6.442541 TGTTCCTACTTGAGGGTGATAAAA 57.557 37.500 0.00 0.00 46.70 1.52
7455 7878 4.669206 TGTGTGATTTCAGCCACAATTT 57.331 36.364 0.00 0.00 43.84 1.82
7460 7883 2.223782 TGCTTTGTGTGATTTCAGCCAC 60.224 45.455 0.00 0.00 0.00 5.01
7466 7889 5.793026 TTTTTGGTGCTTTGTGTGATTTC 57.207 34.783 0.00 0.00 0.00 2.17
7503 7930 4.201822 GGGTTGTCTTTGCTCGATCATTAC 60.202 45.833 0.00 0.00 0.00 1.89
7539 7966 0.933796 GATGCTCTAACAAGCGGCTC 59.066 55.000 1.45 0.00 45.54 4.70
7540 7967 0.539051 AGATGCTCTAACAAGCGGCT 59.461 50.000 0.00 0.00 45.54 5.52
7541 7968 0.933796 GAGATGCTCTAACAAGCGGC 59.066 55.000 0.00 0.00 45.54 6.53
7542 7969 1.134699 TGGAGATGCTCTAACAAGCGG 60.135 52.381 0.00 0.00 45.54 5.52
7543 7970 1.929836 GTGGAGATGCTCTAACAAGCG 59.070 52.381 0.00 0.00 45.54 4.68
7544 7971 3.258971 AGTGGAGATGCTCTAACAAGC 57.741 47.619 0.00 0.00 42.82 4.01
7545 7972 4.573900 ACAAGTGGAGATGCTCTAACAAG 58.426 43.478 0.00 0.00 0.00 3.16
7546 7973 4.623932 ACAAGTGGAGATGCTCTAACAA 57.376 40.909 0.00 0.00 0.00 2.83
7547 7974 4.040339 TGAACAAGTGGAGATGCTCTAACA 59.960 41.667 0.00 0.00 0.00 2.41
7548 7975 4.569943 TGAACAAGTGGAGATGCTCTAAC 58.430 43.478 0.00 0.00 0.00 2.34
7549 7976 4.825422 CTGAACAAGTGGAGATGCTCTAA 58.175 43.478 0.00 0.00 0.00 2.10
7550 7977 3.368843 GCTGAACAAGTGGAGATGCTCTA 60.369 47.826 0.00 0.00 0.00 2.43
7551 7978 2.614987 GCTGAACAAGTGGAGATGCTCT 60.615 50.000 0.00 0.00 0.00 4.09
7552 7979 1.736681 GCTGAACAAGTGGAGATGCTC 59.263 52.381 0.00 0.00 0.00 4.26
7553 7980 1.612726 GGCTGAACAAGTGGAGATGCT 60.613 52.381 0.00 0.00 0.00 3.79
7554 7981 0.807496 GGCTGAACAAGTGGAGATGC 59.193 55.000 0.00 0.00 0.00 3.91
7555 7982 1.457346 GGGCTGAACAAGTGGAGATG 58.543 55.000 0.00 0.00 0.00 2.90
7556 7983 0.329596 GGGGCTGAACAAGTGGAGAT 59.670 55.000 0.00 0.00 0.00 2.75
7557 7984 1.761174 GGGGCTGAACAAGTGGAGA 59.239 57.895 0.00 0.00 0.00 3.71
7558 7985 1.303643 GGGGGCTGAACAAGTGGAG 60.304 63.158 0.00 0.00 0.00 3.86
7559 7986 2.843545 GGGGGCTGAACAAGTGGA 59.156 61.111 0.00 0.00 0.00 4.02
7590 8017 4.377708 CAGGGCCCAAAAAGCGCC 62.378 66.667 27.56 0.00 43.71 6.53
7591 8018 4.377708 CCAGGGCCCAAAAAGCGC 62.378 66.667 27.56 0.00 43.05 5.92
7592 8019 3.694538 CCCAGGGCCCAAAAAGCG 61.695 66.667 27.56 2.39 0.00 4.68
7593 8020 3.321648 CCCCAGGGCCCAAAAAGC 61.322 66.667 27.56 0.00 0.00 3.51
7594 8021 2.607442 CCCCCAGGGCCCAAAAAG 60.607 66.667 27.56 8.31 35.35 2.27
7604 8031 1.132500 GGAACTAGATCACCCCCAGG 58.868 60.000 0.00 0.00 40.04 4.45
7605 8032 1.132500 GGGAACTAGATCACCCCCAG 58.868 60.000 0.00 0.00 36.65 4.45
7606 8033 0.419865 TGGGAACTAGATCACCCCCA 59.580 55.000 0.00 0.00 41.44 4.96
7607 8034 1.132500 CTGGGAACTAGATCACCCCC 58.868 60.000 0.00 0.00 41.44 5.40
7608 8035 0.470341 GCTGGGAACTAGATCACCCC 59.530 60.000 0.00 0.00 41.44 4.95
7609 8036 0.470341 GGCTGGGAACTAGATCACCC 59.530 60.000 0.00 5.73 42.37 4.61
7610 8037 1.134371 GTGGCTGGGAACTAGATCACC 60.134 57.143 0.00 0.76 0.00 4.02
7611 8038 1.471676 CGTGGCTGGGAACTAGATCAC 60.472 57.143 0.00 0.00 0.00 3.06
7612 8039 0.824109 CGTGGCTGGGAACTAGATCA 59.176 55.000 0.00 0.00 0.00 2.92
7613 8040 0.530870 GCGTGGCTGGGAACTAGATC 60.531 60.000 0.00 0.00 0.00 2.75
7614 8041 1.522569 GCGTGGCTGGGAACTAGAT 59.477 57.895 0.00 0.00 0.00 1.98
7615 8042 2.656069 GGCGTGGCTGGGAACTAGA 61.656 63.158 0.00 0.00 0.00 2.43
7616 8043 2.125106 GGCGTGGCTGGGAACTAG 60.125 66.667 0.00 0.00 0.00 2.57
7617 8044 3.712907 GGGCGTGGCTGGGAACTA 61.713 66.667 0.00 0.00 0.00 2.24
7624 8051 3.545124 TTACCTGTGGGCGTGGCTG 62.545 63.158 0.00 0.00 35.63 4.85
7625 8052 2.824880 TTTACCTGTGGGCGTGGCT 61.825 57.895 0.00 0.00 35.63 4.75
7626 8053 2.281900 TTTACCTGTGGGCGTGGC 60.282 61.111 0.00 0.00 35.63 5.01
7627 8054 1.969589 GGTTTACCTGTGGGCGTGG 60.970 63.158 0.00 0.00 35.63 4.94
7628 8055 1.072505 AGGTTTACCTGTGGGCGTG 59.927 57.895 0.00 0.00 46.55 5.34
7629 8056 3.571122 AGGTTTACCTGTGGGCGT 58.429 55.556 0.00 0.00 46.55 5.68
7638 8065 0.594602 GACGTTTGCCCAGGTTTACC 59.405 55.000 0.00 0.00 0.00 2.85
7639 8066 0.236449 CGACGTTTGCCCAGGTTTAC 59.764 55.000 0.00 0.00 0.00 2.01
7640 8067 0.885596 CCGACGTTTGCCCAGGTTTA 60.886 55.000 0.00 0.00 0.00 2.01
7641 8068 2.190841 CCGACGTTTGCCCAGGTTT 61.191 57.895 0.00 0.00 0.00 3.27
7642 8069 2.593436 CCGACGTTTGCCCAGGTT 60.593 61.111 0.00 0.00 0.00 3.50
7643 8070 4.636435 CCCGACGTTTGCCCAGGT 62.636 66.667 0.00 0.00 0.00 4.00
7670 8097 3.905437 TACAAGCCCGGCCCGAAAC 62.905 63.158 3.71 0.00 0.00 2.78
7671 8098 2.693896 TTTACAAGCCCGGCCCGAAA 62.694 55.000 3.71 0.00 0.00 3.46
7672 8099 2.693896 TTTTACAAGCCCGGCCCGAA 62.694 55.000 3.71 0.00 0.00 4.30
7673 8100 3.193469 TTTTACAAGCCCGGCCCGA 62.193 57.895 3.71 0.00 0.00 5.14
7674 8101 2.673687 TTTTACAAGCCCGGCCCG 60.674 61.111 5.55 0.00 0.00 6.13
7675 8102 3.284336 CTTTTACAAGCCCGGCCC 58.716 61.111 5.55 0.00 0.00 5.80
7683 8110 2.500229 TGAAGGTCGGGCTTTTACAAG 58.500 47.619 0.00 0.00 0.00 3.16
7684 8111 2.642154 TGAAGGTCGGGCTTTTACAA 57.358 45.000 0.00 0.00 0.00 2.41
7685 8112 2.871096 ATGAAGGTCGGGCTTTTACA 57.129 45.000 0.00 0.00 0.00 2.41
7686 8113 3.756963 AGAAATGAAGGTCGGGCTTTTAC 59.243 43.478 0.00 0.00 0.00 2.01
7687 8114 4.007659 GAGAAATGAAGGTCGGGCTTTTA 58.992 43.478 0.00 0.00 0.00 1.52
7688 8115 2.820197 GAGAAATGAAGGTCGGGCTTTT 59.180 45.455 0.00 0.00 0.00 2.27
7689 8116 2.224769 TGAGAAATGAAGGTCGGGCTTT 60.225 45.455 0.00 0.00 0.00 3.51
7690 8117 1.351017 TGAGAAATGAAGGTCGGGCTT 59.649 47.619 0.00 0.00 0.00 4.35
7691 8118 0.984230 TGAGAAATGAAGGTCGGGCT 59.016 50.000 0.00 0.00 0.00 5.19
7692 8119 1.740025 CTTGAGAAATGAAGGTCGGGC 59.260 52.381 0.00 0.00 0.00 6.13
7693 8120 3.003480 GACTTGAGAAATGAAGGTCGGG 58.997 50.000 0.00 0.00 0.00 5.14
7694 8121 3.681897 CAGACTTGAGAAATGAAGGTCGG 59.318 47.826 0.00 0.00 0.00 4.79
7695 8122 4.560128 TCAGACTTGAGAAATGAAGGTCG 58.440 43.478 0.00 0.00 0.00 4.79
7708 8135 3.706373 GGCCGGGCTCAGACTTGA 61.706 66.667 22.87 0.00 0.00 3.02
7709 8136 4.785453 GGGCCGGGCTCAGACTTG 62.785 72.222 28.80 0.00 0.00 3.16
7723 8150 1.153229 AGTATTTCGGGCTTCGGGC 60.153 57.895 0.75 0.00 39.77 6.13
7724 8151 0.532196 GGAGTATTTCGGGCTTCGGG 60.532 60.000 0.75 0.00 39.77 5.14
7725 8152 0.532196 GGGAGTATTTCGGGCTTCGG 60.532 60.000 0.75 0.00 39.77 4.30
7726 8153 0.464452 AGGGAGTATTTCGGGCTTCG 59.536 55.000 0.00 0.00 40.90 3.79
7727 8154 1.485066 TCAGGGAGTATTTCGGGCTTC 59.515 52.381 0.00 0.00 0.00 3.86
7728 8155 1.580059 TCAGGGAGTATTTCGGGCTT 58.420 50.000 0.00 0.00 0.00 4.35
7729 8156 1.807814 ATCAGGGAGTATTTCGGGCT 58.192 50.000 0.00 0.00 0.00 5.19
7730 8157 2.640316 AATCAGGGAGTATTTCGGGC 57.360 50.000 0.00 0.00 0.00 6.13
7731 8158 4.150897 TGAAATCAGGGAGTATTTCGGG 57.849 45.455 0.00 0.00 42.45 5.14
7732 8159 5.741388 CTTGAAATCAGGGAGTATTTCGG 57.259 43.478 0.00 0.00 42.45 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.