Multiple sequence alignment - TraesCS3B01G279400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G279400 chr3B 100.000 3076 0 0 1 3076 449164896 449161821 0.000000e+00 5681
1 TraesCS3B01G279400 chr3B 95.312 2496 94 11 588 3076 755227414 755229893 0.000000e+00 3940
2 TraesCS3B01G279400 chr3B 85.780 654 54 25 1524 2139 277032805 277033457 0.000000e+00 656
3 TraesCS3B01G279400 chr3B 89.073 302 25 5 155 449 793143653 793143953 4.850000e-98 368
4 TraesCS3B01G279400 chr3B 85.862 290 20 14 155 431 561703463 561703744 3.880000e-74 289
5 TraesCS3B01G279400 chr3B 88.148 135 15 1 446 579 15808669 15808803 3.170000e-35 159
6 TraesCS3B01G279400 chr3B 86.667 135 17 1 446 579 626195006 626194872 6.870000e-32 148
7 TraesCS3B01G279400 chr3B 95.833 72 3 0 24 95 545858359 545858430 1.940000e-22 117
8 TraesCS3B01G279400 chr3B 85.849 106 13 2 352 457 795775569 795775466 9.020000e-21 111
9 TraesCS3B01G279400 chr7A 94.065 1668 63 15 1429 3076 651433007 651434658 0.000000e+00 2499
10 TraesCS3B01G279400 chr7A 85.213 656 59 20 1523 2147 596686884 596687532 9.300000e-180 640
11 TraesCS3B01G279400 chr7A 87.652 575 40 14 577 1145 651432458 651433007 9.300000e-180 640
12 TraesCS3B01G279400 chr7A 93.000 100 7 0 17 116 402194171 402194270 2.470000e-31 147
13 TraesCS3B01G279400 chr5A 88.889 1467 95 28 598 2016 565383797 565382351 0.000000e+00 1744
14 TraesCS3B01G279400 chr5A 94.905 1001 45 3 2077 3076 565381998 565381003 0.000000e+00 1561
15 TraesCS3B01G279400 chr5A 94.541 458 20 4 1 455 85292398 85291943 0.000000e+00 702
16 TraesCS3B01G279400 chr5A 84.021 194 22 6 596 786 535188911 535188724 8.760000e-41 178
17 TraesCS3B01G279400 chr5A 78.339 277 42 7 1051 1309 474832721 474832445 2.450000e-36 163
18 TraesCS3B01G279400 chr4B 88.819 796 66 9 1300 2079 462783007 462782219 0.000000e+00 955
19 TraesCS3B01G279400 chr4B 85.861 877 61 30 2232 3073 462782213 462781365 0.000000e+00 874
20 TraesCS3B01G279400 chr4B 82.974 417 49 14 27 431 305510922 305510516 1.050000e-94 357
21 TraesCS3B01G279400 chr4B 90.299 134 12 1 446 578 610124762 610124629 1.130000e-39 174
22 TraesCS3B01G279400 chr4B 84.024 169 24 3 1355 1521 223337865 223338032 3.170000e-35 159
23 TraesCS3B01G279400 chr3A 86.567 871 58 27 2238 3073 365962452 365961606 0.000000e+00 905
24 TraesCS3B01G279400 chr3A 88.235 731 63 10 1294 2008 725880962 725881685 0.000000e+00 852
25 TraesCS3B01G279400 chr3A 94.643 448 21 2 1 448 455228130 455227686 0.000000e+00 691
26 TraesCS3B01G279400 chr3A 89.865 444 32 7 1643 2079 365962900 365962463 2.680000e-155 558
27 TraesCS3B01G279400 chr3A 86.354 469 38 13 2615 3075 629691084 629691534 3.560000e-134 488
28 TraesCS3B01G279400 chr3A 81.818 253 38 6 601 847 661663215 661662965 4.020000e-49 206
29 TraesCS3B01G279400 chr7B 98.427 445 7 0 1 445 353328381 353328825 0.000000e+00 784
30 TraesCS3B01G279400 chr7B 86.585 656 56 20 1523 2147 553444348 553445002 0.000000e+00 695
31 TraesCS3B01G279400 chr7B 87.313 134 16 1 446 578 720148433 720148566 5.310000e-33 152
32 TraesCS3B01G279400 chr7B 95.833 72 3 0 24 95 712491027 712491098 1.940000e-22 117
33 TraesCS3B01G279400 chr7D 85.518 656 62 21 1523 2147 520388550 520389203 0.000000e+00 654
34 TraesCS3B01G279400 chr7D 86.765 136 14 2 447 578 47217452 47217317 6.870000e-32 148
35 TraesCS3B01G279400 chr7D 85.821 134 14 5 447 579 108013296 108013425 1.490000e-28 137
36 TraesCS3B01G279400 chr5B 83.708 534 37 27 2234 2736 37076638 37076124 2.800000e-125 459
37 TraesCS3B01G279400 chr5B 89.855 345 22 9 2738 3075 37075959 37075621 6.090000e-117 431
38 TraesCS3B01G279400 chr5B 91.827 208 11 3 1811 2012 37078128 37077921 5.020000e-73 285
39 TraesCS3B01G279400 chr5B 80.142 282 38 7 1046 1309 441650963 441650682 8.700000e-46 195
40 TraesCS3B01G279400 chr5B 95.833 72 3 0 24 95 454128790 454128861 1.940000e-22 117
41 TraesCS3B01G279400 chr6D 86.296 270 31 5 155 419 425060666 425060934 3.880000e-74 289
42 TraesCS3B01G279400 chr6D 90.299 134 12 1 446 578 428977051 428977184 1.130000e-39 174
43 TraesCS3B01G279400 chr6A 88.048 251 19 8 164 403 602226916 602226666 1.400000e-73 287
44 TraesCS3B01G279400 chr6A 80.682 264 42 7 591 847 495442912 495442651 2.420000e-46 196
45 TraesCS3B01G279400 chr6A 88.971 136 11 4 446 578 573639968 573640102 6.820000e-37 165
46 TraesCS3B01G279400 chr2A 85.985 264 28 9 154 410 347871965 347872226 1.090000e-69 274
47 TraesCS3B01G279400 chr5D 80.142 282 38 6 1046 1309 371801407 371801126 8.700000e-46 195
48 TraesCS3B01G279400 chr1B 80.303 264 43 7 591 847 55997536 55997275 1.130000e-44 191
49 TraesCS3B01G279400 chr1A 83.744 203 30 2 591 792 144563722 144563522 4.050000e-44 189
50 TraesCS3B01G279400 chr2B 83.000 200 32 2 601 798 728370276 728370077 2.440000e-41 180
51 TraesCS3B01G279400 chr2B 95.833 72 3 0 24 95 464093225 464093296 1.940000e-22 117
52 TraesCS3B01G279400 chr6B 89.552 134 13 1 446 578 645657180 645657313 5.270000e-38 169
53 TraesCS3B01G279400 chr2D 82.353 170 27 3 1354 1521 278863940 278864108 8.890000e-31 145
54 TraesCS3B01G279400 chr3D 83.478 115 17 2 1184 1298 501159756 501159644 4.190000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G279400 chr3B 449161821 449164896 3075 True 5681.000000 5681 100.000000 1 3076 1 chr3B.!!$R1 3075
1 TraesCS3B01G279400 chr3B 755227414 755229893 2479 False 3940.000000 3940 95.312000 588 3076 1 chr3B.!!$F5 2488
2 TraesCS3B01G279400 chr3B 277032805 277033457 652 False 656.000000 656 85.780000 1524 2139 1 chr3B.!!$F2 615
3 TraesCS3B01G279400 chr7A 651432458 651434658 2200 False 1569.500000 2499 90.858500 577 3076 2 chr7A.!!$F3 2499
4 TraesCS3B01G279400 chr7A 596686884 596687532 648 False 640.000000 640 85.213000 1523 2147 1 chr7A.!!$F2 624
5 TraesCS3B01G279400 chr5A 565381003 565383797 2794 True 1652.500000 1744 91.897000 598 3076 2 chr5A.!!$R4 2478
6 TraesCS3B01G279400 chr4B 462781365 462783007 1642 True 914.500000 955 87.340000 1300 3073 2 chr4B.!!$R3 1773
7 TraesCS3B01G279400 chr3A 725880962 725881685 723 False 852.000000 852 88.235000 1294 2008 1 chr3A.!!$F2 714
8 TraesCS3B01G279400 chr3A 365961606 365962900 1294 True 731.500000 905 88.216000 1643 3073 2 chr3A.!!$R3 1430
9 TraesCS3B01G279400 chr7B 553444348 553445002 654 False 695.000000 695 86.585000 1523 2147 1 chr7B.!!$F2 624
10 TraesCS3B01G279400 chr7D 520388550 520389203 653 False 654.000000 654 85.518000 1523 2147 1 chr7D.!!$F2 624
11 TraesCS3B01G279400 chr5B 37075621 37078128 2507 True 391.666667 459 88.463333 1811 3075 3 chr5B.!!$R2 1264

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
401 402 0.101399 TTTTCAACGCGTGCATGGTT 59.899 45.0 14.98 7.44 0.00 3.67 F
1581 1636 0.035915 GGGAGCTTGGAGGAAGTGAC 60.036 60.0 0.00 0.00 33.73 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1823 1925 0.846015 CCCCAGCATCCCATAGTGAA 59.154 55.0 0.0 0.0 0.0 3.18 R
2789 4315 0.682852 AACCGAACCGATCAGAACCA 59.317 50.0 0.0 0.0 0.0 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.872511 TTTGCCATTCAGTGCAATAGG 57.127 42.857 0.00 0.00 45.96 2.57
23 24 2.804986 TGCCATTCAGTGCAATAGGA 57.195 45.000 0.00 0.00 33.87 2.94
24 25 2.646930 TGCCATTCAGTGCAATAGGAG 58.353 47.619 0.00 0.00 33.87 3.69
25 26 2.025981 TGCCATTCAGTGCAATAGGAGT 60.026 45.455 0.00 0.00 33.87 3.85
26 27 3.019564 GCCATTCAGTGCAATAGGAGTT 58.980 45.455 0.00 0.00 0.00 3.01
27 28 3.445096 GCCATTCAGTGCAATAGGAGTTT 59.555 43.478 0.00 0.00 0.00 2.66
28 29 4.676196 GCCATTCAGTGCAATAGGAGTTTG 60.676 45.833 0.00 0.00 0.00 2.93
37 38 3.928375 GCAATAGGAGTTTGCATGTTTGG 59.072 43.478 3.68 0.00 46.78 3.28
38 39 4.321899 GCAATAGGAGTTTGCATGTTTGGA 60.322 41.667 3.68 0.00 46.78 3.53
39 40 5.625197 GCAATAGGAGTTTGCATGTTTGGAT 60.625 40.000 3.68 0.00 46.78 3.41
40 41 6.405731 GCAATAGGAGTTTGCATGTTTGGATA 60.406 38.462 3.68 0.00 46.78 2.59
41 42 6.949352 ATAGGAGTTTGCATGTTTGGATAG 57.051 37.500 0.00 0.00 0.00 2.08
42 43 3.445096 AGGAGTTTGCATGTTTGGATAGC 59.555 43.478 0.00 0.00 0.00 2.97
43 44 3.429410 GGAGTTTGCATGTTTGGATAGCC 60.429 47.826 0.00 0.00 0.00 3.93
44 45 3.164268 AGTTTGCATGTTTGGATAGCCA 58.836 40.909 0.00 0.00 44.17 4.75
45 46 3.770933 AGTTTGCATGTTTGGATAGCCAT 59.229 39.130 0.00 0.00 45.46 4.40
46 47 4.955450 AGTTTGCATGTTTGGATAGCCATA 59.045 37.500 0.00 0.00 45.46 2.74
47 48 5.599656 AGTTTGCATGTTTGGATAGCCATAT 59.400 36.000 0.00 0.00 45.46 1.78
48 49 5.710513 TTGCATGTTTGGATAGCCATATC 57.289 39.130 0.00 0.00 45.46 1.63
49 50 4.989277 TGCATGTTTGGATAGCCATATCT 58.011 39.130 0.00 0.00 45.46 1.98
50 51 5.387788 TGCATGTTTGGATAGCCATATCTT 58.612 37.500 0.00 0.00 45.46 2.40
51 52 6.541907 TGCATGTTTGGATAGCCATATCTTA 58.458 36.000 0.00 0.00 45.46 2.10
52 53 7.003482 TGCATGTTTGGATAGCCATATCTTAA 58.997 34.615 0.00 0.00 45.46 1.85
53 54 7.670979 TGCATGTTTGGATAGCCATATCTTAAT 59.329 33.333 0.00 0.00 45.46 1.40
54 55 9.177608 GCATGTTTGGATAGCCATATCTTAATA 57.822 33.333 0.00 0.00 45.46 0.98
81 82 5.841957 ATGGGTTTGATCTCTAAATGTGC 57.158 39.130 0.00 0.00 0.00 4.57
82 83 4.922206 TGGGTTTGATCTCTAAATGTGCT 58.078 39.130 0.00 0.00 0.00 4.40
83 84 5.324409 TGGGTTTGATCTCTAAATGTGCTT 58.676 37.500 0.00 0.00 0.00 3.91
84 85 5.183713 TGGGTTTGATCTCTAAATGTGCTTG 59.816 40.000 0.00 0.00 0.00 4.01
85 86 5.415701 GGGTTTGATCTCTAAATGTGCTTGA 59.584 40.000 0.00 0.00 0.00 3.02
86 87 6.071952 GGGTTTGATCTCTAAATGTGCTTGAA 60.072 38.462 0.00 0.00 0.00 2.69
87 88 6.803807 GGTTTGATCTCTAAATGTGCTTGAAC 59.196 38.462 0.00 0.00 0.00 3.18
88 89 7.362662 GTTTGATCTCTAAATGTGCTTGAACA 58.637 34.615 0.00 0.00 0.00 3.18
89 90 7.692460 TTGATCTCTAAATGTGCTTGAACAT 57.308 32.000 0.00 0.00 42.62 2.71
90 91 8.791327 TTGATCTCTAAATGTGCTTGAACATA 57.209 30.769 0.00 0.00 39.89 2.29
91 92 8.791327 TGATCTCTAAATGTGCTTGAACATAA 57.209 30.769 0.00 0.00 39.89 1.90
92 93 9.399797 TGATCTCTAAATGTGCTTGAACATAAT 57.600 29.630 0.00 0.00 39.89 1.28
93 94 9.875675 GATCTCTAAATGTGCTTGAACATAATC 57.124 33.333 0.00 0.00 39.89 1.75
94 95 8.791327 TCTCTAAATGTGCTTGAACATAATCA 57.209 30.769 0.00 0.00 39.89 2.57
95 96 9.230122 TCTCTAAATGTGCTTGAACATAATCAA 57.770 29.630 0.00 0.00 39.89 2.57
109 110 9.739276 TGAACATAATCAAGTTAAGGAAGATGT 57.261 29.630 0.00 0.00 0.00 3.06
111 112 8.425577 ACATAATCAAGTTAAGGAAGATGTCG 57.574 34.615 0.00 0.00 0.00 4.35
112 113 5.803020 AATCAAGTTAAGGAAGATGTCGC 57.197 39.130 0.00 0.00 0.00 5.19
113 114 3.250744 TCAAGTTAAGGAAGATGTCGCG 58.749 45.455 0.00 0.00 0.00 5.87
114 115 2.993899 CAAGTTAAGGAAGATGTCGCGT 59.006 45.455 5.77 0.00 0.00 6.01
115 116 2.877335 AGTTAAGGAAGATGTCGCGTC 58.123 47.619 5.77 0.00 0.00 5.19
116 117 1.582502 GTTAAGGAAGATGTCGCGTCG 59.417 52.381 5.77 0.00 0.00 5.12
117 118 0.524816 TAAGGAAGATGTCGCGTCGC 60.525 55.000 7.29 7.29 0.00 5.19
118 119 2.486636 AAGGAAGATGTCGCGTCGCA 62.487 55.000 18.75 4.50 0.00 5.10
119 120 1.878522 GGAAGATGTCGCGTCGCAT 60.879 57.895 18.75 9.63 0.00 4.73
120 121 1.555538 GAAGATGTCGCGTCGCATC 59.444 57.895 18.75 22.97 39.08 3.91
121 122 0.867753 GAAGATGTCGCGTCGCATCT 60.868 55.000 25.48 25.48 45.04 2.90
122 123 0.458543 AAGATGTCGCGTCGCATCTT 60.459 50.000 30.40 30.40 45.55 2.40
123 124 0.867753 AGATGTCGCGTCGCATCTTC 60.868 55.000 25.48 15.16 42.79 2.87
124 125 2.123505 GATGTCGCGTCGCATCTTCG 62.124 60.000 18.75 0.00 37.39 3.79
125 126 2.867333 ATGTCGCGTCGCATCTTCGT 62.867 55.000 18.75 0.92 0.00 3.85
126 127 2.874315 TCGCGTCGCATCTTCGTG 60.874 61.111 18.75 0.00 36.60 4.35
127 128 3.902063 CGCGTCGCATCTTCGTGG 61.902 66.667 18.75 0.00 0.00 4.94
128 129 2.506217 GCGTCGCATCTTCGTGGA 60.506 61.111 13.44 0.00 0.00 4.02
129 130 2.092291 GCGTCGCATCTTCGTGGAA 61.092 57.895 13.44 0.00 0.00 3.53
130 131 1.623081 GCGTCGCATCTTCGTGGAAA 61.623 55.000 13.44 0.00 0.00 3.13
131 132 0.366871 CGTCGCATCTTCGTGGAAAG 59.633 55.000 0.00 0.00 0.00 2.62
132 133 1.429463 GTCGCATCTTCGTGGAAAGT 58.571 50.000 0.00 0.00 0.00 2.66
133 134 2.602878 GTCGCATCTTCGTGGAAAGTA 58.397 47.619 0.00 0.00 0.00 2.24
134 135 2.991190 GTCGCATCTTCGTGGAAAGTAA 59.009 45.455 0.00 0.00 0.00 2.24
135 136 3.430895 GTCGCATCTTCGTGGAAAGTAAA 59.569 43.478 0.00 0.00 0.00 2.01
136 137 3.678072 TCGCATCTTCGTGGAAAGTAAAG 59.322 43.478 0.00 0.00 0.00 1.85
137 138 3.432252 CGCATCTTCGTGGAAAGTAAAGT 59.568 43.478 0.00 0.00 0.00 2.66
138 139 4.084013 CGCATCTTCGTGGAAAGTAAAGTT 60.084 41.667 0.00 0.00 0.00 2.66
139 140 5.147162 GCATCTTCGTGGAAAGTAAAGTTG 58.853 41.667 0.00 0.00 0.00 3.16
140 141 5.277828 GCATCTTCGTGGAAAGTAAAGTTGT 60.278 40.000 0.00 0.00 0.00 3.32
141 142 5.978934 TCTTCGTGGAAAGTAAAGTTGTC 57.021 39.130 0.00 0.00 0.00 3.18
142 143 5.667466 TCTTCGTGGAAAGTAAAGTTGTCT 58.333 37.500 0.00 0.00 0.00 3.41
143 144 5.751990 TCTTCGTGGAAAGTAAAGTTGTCTC 59.248 40.000 0.00 0.00 0.00 3.36
144 145 5.272283 TCGTGGAAAGTAAAGTTGTCTCT 57.728 39.130 0.00 0.00 0.00 3.10
145 146 5.667466 TCGTGGAAAGTAAAGTTGTCTCTT 58.333 37.500 0.00 0.00 0.00 2.85
146 147 6.808829 TCGTGGAAAGTAAAGTTGTCTCTTA 58.191 36.000 0.00 0.00 0.00 2.10
147 148 7.439381 TCGTGGAAAGTAAAGTTGTCTCTTAT 58.561 34.615 0.00 0.00 0.00 1.73
148 149 8.579006 TCGTGGAAAGTAAAGTTGTCTCTTATA 58.421 33.333 0.00 0.00 0.00 0.98
149 150 9.367444 CGTGGAAAGTAAAGTTGTCTCTTATAT 57.633 33.333 0.00 0.00 0.00 0.86
160 161 7.953752 AGTTGTCTCTTATATACCTACCTTGC 58.046 38.462 0.00 0.00 0.00 4.01
161 162 6.570672 TGTCTCTTATATACCTACCTTGCG 57.429 41.667 0.00 0.00 0.00 4.85
162 163 5.048224 TGTCTCTTATATACCTACCTTGCGC 60.048 44.000 0.00 0.00 0.00 6.09
163 164 4.461781 TCTCTTATATACCTACCTTGCGCC 59.538 45.833 4.18 0.00 0.00 6.53
164 165 4.154176 TCTTATATACCTACCTTGCGCCA 58.846 43.478 4.18 0.00 0.00 5.69
165 166 4.775780 TCTTATATACCTACCTTGCGCCAT 59.224 41.667 4.18 0.00 0.00 4.40
166 167 5.247564 TCTTATATACCTACCTTGCGCCATT 59.752 40.000 4.18 0.00 0.00 3.16
167 168 2.729028 ATACCTACCTTGCGCCATTT 57.271 45.000 4.18 0.00 0.00 2.32
168 169 1.745232 TACCTACCTTGCGCCATTTG 58.255 50.000 4.18 0.00 0.00 2.32
169 170 0.965363 ACCTACCTTGCGCCATTTGG 60.965 55.000 4.18 2.67 38.53 3.28
170 171 0.965363 CCTACCTTGCGCCATTTGGT 60.965 55.000 4.18 8.49 37.57 3.67
171 172 0.887933 CTACCTTGCGCCATTTGGTT 59.112 50.000 4.18 0.00 37.57 3.67
172 173 0.885196 TACCTTGCGCCATTTGGTTC 59.115 50.000 4.18 0.00 37.57 3.62
173 174 0.827507 ACCTTGCGCCATTTGGTTCT 60.828 50.000 4.18 0.00 37.57 3.01
174 175 1.173043 CCTTGCGCCATTTGGTTCTA 58.827 50.000 4.18 0.00 37.57 2.10
175 176 1.750778 CCTTGCGCCATTTGGTTCTAT 59.249 47.619 4.18 0.00 37.57 1.98
176 177 2.480073 CCTTGCGCCATTTGGTTCTATG 60.480 50.000 4.18 0.00 37.57 2.23
177 178 1.832883 TGCGCCATTTGGTTCTATGT 58.167 45.000 4.18 0.00 37.57 2.29
178 179 2.166829 TGCGCCATTTGGTTCTATGTT 58.833 42.857 4.18 0.00 37.57 2.71
179 180 3.348119 TGCGCCATTTGGTTCTATGTTA 58.652 40.909 4.18 0.00 37.57 2.41
180 181 3.951037 TGCGCCATTTGGTTCTATGTTAT 59.049 39.130 4.18 0.00 37.57 1.89
181 182 4.036262 TGCGCCATTTGGTTCTATGTTATC 59.964 41.667 4.18 0.00 37.57 1.75
182 183 4.556699 GCGCCATTTGGTTCTATGTTATCC 60.557 45.833 0.00 0.00 37.57 2.59
183 184 4.578516 CGCCATTTGGTTCTATGTTATCCA 59.421 41.667 0.00 0.00 37.57 3.41
184 185 5.067153 CGCCATTTGGTTCTATGTTATCCAA 59.933 40.000 0.00 0.00 36.55 3.53
185 186 6.239008 CGCCATTTGGTTCTATGTTATCCAAT 60.239 38.462 0.00 0.00 37.87 3.16
186 187 7.040755 CGCCATTTGGTTCTATGTTATCCAATA 60.041 37.037 0.00 0.00 37.87 1.90
187 188 8.637986 GCCATTTGGTTCTATGTTATCCAATAA 58.362 33.333 0.00 0.00 37.87 1.40
206 207 9.695526 TCCAATAAGATAACAAAATATGCATGC 57.304 29.630 11.82 11.82 0.00 4.06
207 208 9.701098 CCAATAAGATAACAAAATATGCATGCT 57.299 29.630 20.33 7.07 0.00 3.79
211 212 8.867112 AAGATAACAAAATATGCATGCTCAAG 57.133 30.769 20.33 4.98 0.00 3.02
212 213 8.004087 AGATAACAAAATATGCATGCTCAAGT 57.996 30.769 20.33 5.62 0.00 3.16
213 214 9.123902 AGATAACAAAATATGCATGCTCAAGTA 57.876 29.630 20.33 0.00 0.00 2.24
214 215 9.903682 GATAACAAAATATGCATGCTCAAGTAT 57.096 29.630 20.33 5.16 0.00 2.12
226 227 9.955208 TGCATGCTCAAGTATATATTTTCAAAG 57.045 29.630 20.33 0.00 0.00 2.77
257 258 9.413734 ACTATCCTTCATTTTCATCTTAAAGGG 57.586 33.333 0.00 0.00 34.04 3.95
258 259 9.413734 CTATCCTTCATTTTCATCTTAAAGGGT 57.586 33.333 0.00 0.00 34.04 4.34
259 260 8.670521 ATCCTTCATTTTCATCTTAAAGGGTT 57.329 30.769 0.00 0.00 34.04 4.11
260 261 8.491045 TCCTTCATTTTCATCTTAAAGGGTTT 57.509 30.769 0.00 0.00 34.04 3.27
261 262 8.367156 TCCTTCATTTTCATCTTAAAGGGTTTG 58.633 33.333 0.00 0.00 34.04 2.93
262 263 8.367156 CCTTCATTTTCATCTTAAAGGGTTTGA 58.633 33.333 0.00 0.00 0.00 2.69
263 264 9.762933 CTTCATTTTCATCTTAAAGGGTTTGAA 57.237 29.630 0.00 0.00 0.00 2.69
271 272 9.020731 TCATCTTAAAGGGTTTGAATTAGAACC 57.979 33.333 12.04 12.04 43.61 3.62
279 280 6.510879 GGTTTGAATTAGAACCCTAAGTGG 57.489 41.667 10.09 0.00 39.49 4.00
280 281 6.008331 GGTTTGAATTAGAACCCTAAGTGGT 58.992 40.000 10.09 0.00 39.49 4.16
291 292 6.520021 AACCCTAAGTGGTTACTAAAACCT 57.480 37.500 8.29 0.00 46.70 3.50
292 293 7.631510 AACCCTAAGTGGTTACTAAAACCTA 57.368 36.000 8.29 0.00 46.70 3.08
293 294 7.009179 ACCCTAAGTGGTTACTAAAACCTAC 57.991 40.000 8.29 5.30 40.88 3.18
294 295 6.789457 ACCCTAAGTGGTTACTAAAACCTACT 59.211 38.462 8.29 7.16 40.88 2.57
295 296 7.293299 ACCCTAAGTGGTTACTAAAACCTACTT 59.707 37.037 19.21 19.21 40.82 2.24
296 297 7.821359 CCCTAAGTGGTTACTAAAACCTACTTC 59.179 40.741 18.99 4.49 39.71 3.01
297 298 8.591940 CCTAAGTGGTTACTAAAACCTACTTCT 58.408 37.037 18.99 7.72 39.71 2.85
301 302 9.939802 AGTGGTTACTAAAACCTACTTCTAATG 57.060 33.333 8.29 0.00 40.88 1.90
302 303 9.933723 GTGGTTACTAAAACCTACTTCTAATGA 57.066 33.333 8.29 0.00 40.88 2.57
326 327 9.932699 TGAATTCAAATATTTGCAAAACACTTG 57.067 25.926 21.15 15.92 38.05 3.16
327 328 9.384682 GAATTCAAATATTTGCAAAACACTTGG 57.615 29.630 21.15 5.36 38.05 3.61
328 329 6.857777 TCAAATATTTGCAAAACACTTGGG 57.142 33.333 21.15 1.92 38.05 4.12
329 330 6.352516 TCAAATATTTGCAAAACACTTGGGT 58.647 32.000 21.15 0.00 38.05 4.51
330 331 6.825721 TCAAATATTTGCAAAACACTTGGGTT 59.174 30.769 21.15 0.00 38.05 4.11
331 332 7.337942 TCAAATATTTGCAAAACACTTGGGTTT 59.662 29.630 21.15 4.54 38.98 3.27
332 333 4.961435 ATTTGCAAAACACTTGGGTTTG 57.039 36.364 17.19 0.65 40.64 2.93
333 334 3.685139 TTGCAAAACACTTGGGTTTGA 57.315 38.095 8.87 0.00 40.64 2.69
334 335 2.966050 TGCAAAACACTTGGGTTTGAC 58.034 42.857 8.87 0.00 40.64 3.18
335 336 2.300152 TGCAAAACACTTGGGTTTGACA 59.700 40.909 8.87 1.34 40.64 3.58
336 337 3.055530 TGCAAAACACTTGGGTTTGACAT 60.056 39.130 8.87 0.00 40.64 3.06
337 338 3.309410 GCAAAACACTTGGGTTTGACATG 59.691 43.478 8.87 0.00 40.64 3.21
338 339 3.817709 AAACACTTGGGTTTGACATGG 57.182 42.857 0.00 0.00 39.40 3.66
339 340 2.452600 ACACTTGGGTTTGACATGGT 57.547 45.000 0.00 0.00 0.00 3.55
340 341 2.306847 ACACTTGGGTTTGACATGGTC 58.693 47.619 0.00 0.00 0.00 4.02
341 342 2.091885 ACACTTGGGTTTGACATGGTCT 60.092 45.455 0.00 0.00 33.15 3.85
342 343 2.554032 CACTTGGGTTTGACATGGTCTC 59.446 50.000 0.00 0.00 33.15 3.36
343 344 2.443255 ACTTGGGTTTGACATGGTCTCT 59.557 45.455 0.00 0.00 33.15 3.10
344 345 2.566833 TGGGTTTGACATGGTCTCTG 57.433 50.000 0.00 0.00 33.15 3.35
345 346 1.168714 GGGTTTGACATGGTCTCTGC 58.831 55.000 0.00 0.00 33.15 4.26
346 347 1.545428 GGGTTTGACATGGTCTCTGCA 60.545 52.381 0.00 0.00 33.15 4.41
347 348 1.537202 GGTTTGACATGGTCTCTGCAC 59.463 52.381 0.00 0.00 33.15 4.57
348 349 2.498167 GTTTGACATGGTCTCTGCACT 58.502 47.619 0.00 0.00 33.15 4.40
349 350 2.880890 GTTTGACATGGTCTCTGCACTT 59.119 45.455 0.00 0.00 33.15 3.16
350 351 2.174363 TGACATGGTCTCTGCACTTG 57.826 50.000 0.00 0.00 33.15 3.16
351 352 0.801251 GACATGGTCTCTGCACTTGC 59.199 55.000 0.00 0.00 42.50 4.01
352 353 0.399454 ACATGGTCTCTGCACTTGCT 59.601 50.000 2.33 0.00 42.66 3.91
353 354 1.085091 CATGGTCTCTGCACTTGCTC 58.915 55.000 2.33 0.00 42.66 4.26
354 355 0.689055 ATGGTCTCTGCACTTGCTCA 59.311 50.000 2.33 0.00 42.66 4.26
355 356 0.469494 TGGTCTCTGCACTTGCTCAA 59.531 50.000 2.33 0.00 42.66 3.02
356 357 1.134128 TGGTCTCTGCACTTGCTCAAA 60.134 47.619 2.33 0.00 42.66 2.69
357 358 1.265365 GGTCTCTGCACTTGCTCAAAC 59.735 52.381 2.33 0.00 42.66 2.93
358 359 1.942657 GTCTCTGCACTTGCTCAAACA 59.057 47.619 2.33 0.00 42.66 2.83
359 360 2.551459 GTCTCTGCACTTGCTCAAACAT 59.449 45.455 2.33 0.00 42.66 2.71
360 361 3.748048 GTCTCTGCACTTGCTCAAACATA 59.252 43.478 2.33 0.00 42.66 2.29
361 362 4.214119 GTCTCTGCACTTGCTCAAACATAA 59.786 41.667 2.33 0.00 42.66 1.90
362 363 4.821260 TCTCTGCACTTGCTCAAACATAAA 59.179 37.500 2.33 0.00 42.66 1.40
363 364 5.049198 TCTCTGCACTTGCTCAAACATAAAG 60.049 40.000 2.33 0.00 42.66 1.85
364 365 4.580167 TCTGCACTTGCTCAAACATAAAGT 59.420 37.500 2.33 0.00 42.66 2.66
365 366 5.067674 TCTGCACTTGCTCAAACATAAAGTT 59.932 36.000 2.33 0.00 41.56 2.66
366 367 6.262049 TCTGCACTTGCTCAAACATAAAGTTA 59.738 34.615 2.33 0.00 39.93 2.24
367 368 6.205784 TGCACTTGCTCAAACATAAAGTTAC 58.794 36.000 2.33 0.00 39.93 2.50
368 369 6.039270 TGCACTTGCTCAAACATAAAGTTACT 59.961 34.615 2.33 0.00 39.93 2.24
369 370 6.360681 GCACTTGCTCAAACATAAAGTTACTG 59.639 38.462 0.00 0.00 37.51 2.74
370 371 7.639039 CACTTGCTCAAACATAAAGTTACTGA 58.361 34.615 0.00 0.00 40.26 3.41
371 372 8.128582 CACTTGCTCAAACATAAAGTTACTGAA 58.871 33.333 0.00 0.00 40.26 3.02
372 373 8.682710 ACTTGCTCAAACATAAAGTTACTGAAA 58.317 29.630 0.00 0.00 40.26 2.69
373 374 9.515020 CTTGCTCAAACATAAAGTTACTGAAAA 57.485 29.630 0.00 0.00 40.26 2.29
374 375 9.862371 TTGCTCAAACATAAAGTTACTGAAAAA 57.138 25.926 0.00 0.00 40.26 1.94
393 394 5.837586 AAAAATGCATATTTTCAACGCGT 57.162 30.435 5.58 5.58 43.74 6.01
394 395 4.821414 AAATGCATATTTTCAACGCGTG 57.179 36.364 14.98 7.52 32.70 5.34
395 396 1.612156 TGCATATTTTCAACGCGTGC 58.388 45.000 14.98 9.32 0.00 5.34
396 397 1.068954 TGCATATTTTCAACGCGTGCA 60.069 42.857 14.98 12.30 38.62 4.57
397 398 2.184448 GCATATTTTCAACGCGTGCAT 58.816 42.857 14.98 3.19 0.00 3.96
398 399 2.035508 GCATATTTTCAACGCGTGCATG 60.036 45.455 14.98 8.02 0.00 4.06
399 400 2.254918 TATTTTCAACGCGTGCATGG 57.745 45.000 14.98 0.00 0.00 3.66
400 401 0.313672 ATTTTCAACGCGTGCATGGT 59.686 45.000 14.98 0.99 0.00 3.55
401 402 0.101399 TTTTCAACGCGTGCATGGTT 59.899 45.000 14.98 7.44 0.00 3.67
402 403 0.101399 TTTCAACGCGTGCATGGTTT 59.899 45.000 14.98 0.00 0.00 3.27
403 404 0.101399 TTCAACGCGTGCATGGTTTT 59.899 45.000 14.98 0.00 0.00 2.43
404 405 0.945099 TCAACGCGTGCATGGTTTTA 59.055 45.000 14.98 0.00 0.00 1.52
405 406 1.333931 TCAACGCGTGCATGGTTTTAA 59.666 42.857 14.98 0.00 0.00 1.52
406 407 2.120232 CAACGCGTGCATGGTTTTAAA 58.880 42.857 14.98 0.00 0.00 1.52
407 408 2.715737 ACGCGTGCATGGTTTTAAAT 57.284 40.000 12.93 0.00 0.00 1.40
408 409 2.323959 ACGCGTGCATGGTTTTAAATG 58.676 42.857 12.93 0.00 0.00 2.32
409 410 1.653114 CGCGTGCATGGTTTTAAATGG 59.347 47.619 8.27 0.00 0.00 3.16
410 411 2.669670 CGCGTGCATGGTTTTAAATGGA 60.670 45.455 8.27 0.00 0.00 3.41
411 412 3.520569 GCGTGCATGGTTTTAAATGGAT 58.479 40.909 8.27 0.00 0.00 3.41
412 413 3.551485 GCGTGCATGGTTTTAAATGGATC 59.449 43.478 8.27 0.00 0.00 3.36
413 414 4.677779 GCGTGCATGGTTTTAAATGGATCT 60.678 41.667 8.27 0.00 0.00 2.75
414 415 5.036737 CGTGCATGGTTTTAAATGGATCTC 58.963 41.667 0.00 0.00 0.00 2.75
415 416 5.163622 CGTGCATGGTTTTAAATGGATCTCT 60.164 40.000 0.00 0.00 0.00 3.10
416 417 6.038356 GTGCATGGTTTTAAATGGATCTCTG 58.962 40.000 0.00 0.00 0.00 3.35
417 418 5.045872 GCATGGTTTTAAATGGATCTCTGC 58.954 41.667 0.00 0.00 0.00 4.26
418 419 4.963276 TGGTTTTAAATGGATCTCTGCG 57.037 40.909 0.00 0.00 0.00 5.18
419 420 3.128589 TGGTTTTAAATGGATCTCTGCGC 59.871 43.478 0.00 0.00 0.00 6.09
420 421 3.489229 GGTTTTAAATGGATCTCTGCGCC 60.489 47.826 4.18 0.00 0.00 6.53
421 422 2.708216 TTAAATGGATCTCTGCGCCA 57.292 45.000 4.18 0.00 35.91 5.69
422 423 2.936919 TAAATGGATCTCTGCGCCAT 57.063 45.000 4.18 0.00 43.95 4.40
423 424 3.815133 AATGGATCTCTGCGCCATT 57.185 47.368 4.18 2.03 45.08 3.16
424 425 3.815133 ATGGATCTCTGCGCCATTT 57.185 47.368 4.18 0.00 39.28 2.32
425 426 1.315690 ATGGATCTCTGCGCCATTTG 58.684 50.000 4.18 0.00 39.28 2.32
426 427 0.749091 TGGATCTCTGCGCCATTTGG 60.749 55.000 4.18 0.00 38.53 3.28
436 437 3.050339 CCATTTGGCGCAACTGGT 58.950 55.556 10.83 0.00 38.71 4.00
437 438 1.080569 CCATTTGGCGCAACTGGTC 60.081 57.895 10.83 0.00 38.71 4.02
438 439 1.659233 CATTTGGCGCAACTGGTCA 59.341 52.632 10.83 0.00 0.00 4.02
439 440 0.244450 CATTTGGCGCAACTGGTCAT 59.756 50.000 10.83 0.00 0.00 3.06
440 441 0.527565 ATTTGGCGCAACTGGTCATC 59.472 50.000 10.83 0.00 0.00 2.92
441 442 0.537143 TTTGGCGCAACTGGTCATCT 60.537 50.000 10.83 0.00 0.00 2.90
442 443 0.323302 TTGGCGCAACTGGTCATCTA 59.677 50.000 10.83 0.00 0.00 1.98
443 444 0.108186 TGGCGCAACTGGTCATCTAG 60.108 55.000 10.83 0.00 0.00 2.43
444 445 0.108138 GGCGCAACTGGTCATCTAGT 60.108 55.000 10.83 0.00 36.97 2.57
445 446 1.676014 GGCGCAACTGGTCATCTAGTT 60.676 52.381 10.83 0.00 44.19 2.24
446 447 2.418197 GGCGCAACTGGTCATCTAGTTA 60.418 50.000 10.83 0.00 42.09 2.24
447 448 3.458189 GCGCAACTGGTCATCTAGTTAT 58.542 45.455 0.30 0.00 42.09 1.89
448 449 4.500887 GGCGCAACTGGTCATCTAGTTATA 60.501 45.833 10.83 0.00 42.09 0.98
449 450 5.230942 GCGCAACTGGTCATCTAGTTATAT 58.769 41.667 0.30 0.00 42.09 0.86
450 451 6.387465 GCGCAACTGGTCATCTAGTTATATA 58.613 40.000 0.30 0.00 42.09 0.86
451 452 6.866770 GCGCAACTGGTCATCTAGTTATATAA 59.133 38.462 0.30 0.00 42.09 0.98
452 453 7.384115 GCGCAACTGGTCATCTAGTTATATAAA 59.616 37.037 0.30 0.00 42.09 1.40
453 454 9.256477 CGCAACTGGTCATCTAGTTATATAAAA 57.744 33.333 0.00 0.00 42.09 1.52
472 473 9.844257 ATATAAAAAGATCCAACTCTTCCTCAG 57.156 33.333 0.00 0.00 34.40 3.35
473 474 3.625649 AAGATCCAACTCTTCCTCAGC 57.374 47.619 0.00 0.00 29.38 4.26
474 475 2.831565 AGATCCAACTCTTCCTCAGCT 58.168 47.619 0.00 0.00 0.00 4.24
475 476 3.180507 AGATCCAACTCTTCCTCAGCTT 58.819 45.455 0.00 0.00 0.00 3.74
476 477 3.586618 AGATCCAACTCTTCCTCAGCTTT 59.413 43.478 0.00 0.00 0.00 3.51
477 478 3.864789 TCCAACTCTTCCTCAGCTTTT 57.135 42.857 0.00 0.00 0.00 2.27
478 479 3.480470 TCCAACTCTTCCTCAGCTTTTG 58.520 45.455 0.00 0.00 0.00 2.44
479 480 2.555757 CCAACTCTTCCTCAGCTTTTGG 59.444 50.000 0.00 0.00 0.00 3.28
480 481 2.555757 CAACTCTTCCTCAGCTTTTGGG 59.444 50.000 0.00 0.00 0.00 4.12
487 488 3.725754 TCAGCTTTTGGGGTGAGAC 57.274 52.632 0.00 0.00 38.55 3.36
488 489 1.140312 TCAGCTTTTGGGGTGAGACT 58.860 50.000 0.00 0.00 38.55 3.24
489 490 2.334977 TCAGCTTTTGGGGTGAGACTA 58.665 47.619 0.00 0.00 38.55 2.59
490 491 2.708861 TCAGCTTTTGGGGTGAGACTAA 59.291 45.455 0.00 0.00 38.55 2.24
491 492 3.137544 TCAGCTTTTGGGGTGAGACTAAA 59.862 43.478 0.00 0.00 38.55 1.85
492 493 3.253432 CAGCTTTTGGGGTGAGACTAAAC 59.747 47.826 0.00 0.00 36.91 2.01
493 494 3.138468 AGCTTTTGGGGTGAGACTAAACT 59.862 43.478 0.00 0.00 0.00 2.66
494 495 3.889538 GCTTTTGGGGTGAGACTAAACTT 59.110 43.478 0.00 0.00 0.00 2.66
495 496 5.067954 GCTTTTGGGGTGAGACTAAACTTA 58.932 41.667 0.00 0.00 0.00 2.24
496 497 5.181433 GCTTTTGGGGTGAGACTAAACTTAG 59.819 44.000 0.00 0.00 36.82 2.18
497 498 6.503560 TTTTGGGGTGAGACTAAACTTAGA 57.496 37.500 3.50 0.00 34.84 2.10
498 499 5.740290 TTGGGGTGAGACTAAACTTAGAG 57.260 43.478 3.50 0.00 34.84 2.43
499 500 3.514309 TGGGGTGAGACTAAACTTAGAGC 59.486 47.826 3.50 0.00 34.84 4.09
500 501 3.118702 GGGGTGAGACTAAACTTAGAGCC 60.119 52.174 3.50 0.60 34.84 4.70
501 502 3.514309 GGGTGAGACTAAACTTAGAGCCA 59.486 47.826 3.50 0.00 34.84 4.75
502 503 4.496360 GGTGAGACTAAACTTAGAGCCAC 58.504 47.826 3.50 7.20 34.84 5.01
503 504 4.496360 GTGAGACTAAACTTAGAGCCACC 58.504 47.826 3.50 0.00 34.84 4.61
504 505 4.021368 GTGAGACTAAACTTAGAGCCACCA 60.021 45.833 3.50 0.00 34.84 4.17
505 506 4.021368 TGAGACTAAACTTAGAGCCACCAC 60.021 45.833 3.50 0.00 34.84 4.16
506 507 4.161102 AGACTAAACTTAGAGCCACCACT 58.839 43.478 3.50 0.00 34.84 4.00
507 508 4.593634 AGACTAAACTTAGAGCCACCACTT 59.406 41.667 3.50 0.00 34.84 3.16
508 509 4.642429 ACTAAACTTAGAGCCACCACTTG 58.358 43.478 3.50 0.00 34.84 3.16
509 510 1.897560 AACTTAGAGCCACCACTTGC 58.102 50.000 0.00 0.00 0.00 4.01
510 511 1.059913 ACTTAGAGCCACCACTTGCT 58.940 50.000 0.00 0.00 41.42 3.91
511 512 2.257207 ACTTAGAGCCACCACTTGCTA 58.743 47.619 0.00 0.00 38.11 3.49
512 513 2.840651 ACTTAGAGCCACCACTTGCTAT 59.159 45.455 0.00 0.00 38.11 2.97
513 514 3.264450 ACTTAGAGCCACCACTTGCTATT 59.736 43.478 0.00 0.00 38.11 1.73
514 515 2.887151 AGAGCCACCACTTGCTATTT 57.113 45.000 0.00 0.00 38.11 1.40
515 516 3.160679 AGAGCCACCACTTGCTATTTT 57.839 42.857 0.00 0.00 38.11 1.82
516 517 4.301072 AGAGCCACCACTTGCTATTTTA 57.699 40.909 0.00 0.00 38.11 1.52
517 518 4.860022 AGAGCCACCACTTGCTATTTTAT 58.140 39.130 0.00 0.00 38.11 1.40
518 519 5.264395 AGAGCCACCACTTGCTATTTTATT 58.736 37.500 0.00 0.00 38.11 1.40
519 520 5.358160 AGAGCCACCACTTGCTATTTTATTC 59.642 40.000 0.00 0.00 38.11 1.75
520 521 5.016173 AGCCACCACTTGCTATTTTATTCA 58.984 37.500 0.00 0.00 35.69 2.57
521 522 5.658190 AGCCACCACTTGCTATTTTATTCAT 59.342 36.000 0.00 0.00 35.69 2.57
522 523 5.750067 GCCACCACTTGCTATTTTATTCATG 59.250 40.000 0.00 0.00 0.00 3.07
523 524 6.275335 CCACCACTTGCTATTTTATTCATGG 58.725 40.000 0.00 0.00 0.00 3.66
524 525 6.275335 CACCACTTGCTATTTTATTCATGGG 58.725 40.000 0.00 0.00 0.00 4.00
525 526 5.163416 ACCACTTGCTATTTTATTCATGGGC 60.163 40.000 0.00 0.00 0.00 5.36
526 527 5.291971 CACTTGCTATTTTATTCATGGGCC 58.708 41.667 0.00 0.00 0.00 5.80
527 528 4.961730 ACTTGCTATTTTATTCATGGGCCA 59.038 37.500 9.61 9.61 0.00 5.36
528 529 4.935352 TGCTATTTTATTCATGGGCCAC 57.065 40.909 9.28 0.00 0.00 5.01
529 530 4.545678 TGCTATTTTATTCATGGGCCACT 58.454 39.130 9.28 0.00 0.00 4.00
530 531 5.700183 TGCTATTTTATTCATGGGCCACTA 58.300 37.500 9.28 0.00 0.00 2.74
531 532 6.314120 TGCTATTTTATTCATGGGCCACTAT 58.686 36.000 9.28 5.13 0.00 2.12
532 533 6.782000 TGCTATTTTATTCATGGGCCACTATT 59.218 34.615 9.28 0.00 0.00 1.73
533 534 7.289782 TGCTATTTTATTCATGGGCCACTATTT 59.710 33.333 9.28 0.00 0.00 1.40
534 535 7.599998 GCTATTTTATTCATGGGCCACTATTTG 59.400 37.037 9.28 2.21 0.00 2.32
535 536 7.673641 ATTTTATTCATGGGCCACTATTTGA 57.326 32.000 9.28 5.30 0.00 2.69
536 537 6.713762 TTTATTCATGGGCCACTATTTGAG 57.286 37.500 9.28 0.00 0.00 3.02
537 538 4.524802 ATTCATGGGCCACTATTTGAGA 57.475 40.909 9.28 0.00 0.00 3.27
538 539 4.524802 TTCATGGGCCACTATTTGAGAT 57.475 40.909 9.28 0.00 0.00 2.75
539 540 4.524802 TCATGGGCCACTATTTGAGATT 57.475 40.909 9.28 0.00 0.00 2.40
540 541 4.870636 TCATGGGCCACTATTTGAGATTT 58.129 39.130 9.28 0.00 0.00 2.17
541 542 4.889409 TCATGGGCCACTATTTGAGATTTC 59.111 41.667 9.28 0.00 0.00 2.17
542 543 4.314522 TGGGCCACTATTTGAGATTTCA 57.685 40.909 0.00 0.00 0.00 2.69
543 544 4.272489 TGGGCCACTATTTGAGATTTCAG 58.728 43.478 0.00 0.00 34.15 3.02
544 545 4.018506 TGGGCCACTATTTGAGATTTCAGA 60.019 41.667 0.00 0.00 34.15 3.27
545 546 4.949856 GGGCCACTATTTGAGATTTCAGAA 59.050 41.667 4.39 0.00 34.15 3.02
546 547 5.595952 GGGCCACTATTTGAGATTTCAGAAT 59.404 40.000 4.39 0.00 34.15 2.40
547 548 6.097412 GGGCCACTATTTGAGATTTCAGAATT 59.903 38.462 4.39 0.00 34.15 2.17
548 549 7.364144 GGGCCACTATTTGAGATTTCAGAATTT 60.364 37.037 4.39 0.00 34.15 1.82
549 550 7.704047 GGCCACTATTTGAGATTTCAGAATTTC 59.296 37.037 0.00 0.00 34.15 2.17
550 551 8.465201 GCCACTATTTGAGATTTCAGAATTTCT 58.535 33.333 0.00 0.00 34.15 2.52
558 559 8.297470 TGAGATTTCAGAATTTCTTAATGGGG 57.703 34.615 0.00 0.00 30.01 4.96
559 560 7.117285 AGATTTCAGAATTTCTTAATGGGGC 57.883 36.000 0.00 0.00 0.00 5.80
560 561 6.669154 AGATTTCAGAATTTCTTAATGGGGCA 59.331 34.615 0.00 0.00 0.00 5.36
561 562 6.678568 TTTCAGAATTTCTTAATGGGGCAA 57.321 33.333 0.00 0.00 0.00 4.52
562 563 5.920193 TCAGAATTTCTTAATGGGGCAAG 57.080 39.130 0.00 0.00 0.00 4.01
563 564 4.160252 TCAGAATTTCTTAATGGGGCAAGC 59.840 41.667 0.00 0.00 0.00 4.01
564 565 3.452264 AGAATTTCTTAATGGGGCAAGCC 59.548 43.478 1.52 1.52 0.00 4.35
565 566 2.317371 TTTCTTAATGGGGCAAGCCA 57.683 45.000 13.87 0.00 37.98 4.75
566 567 2.548464 TTCTTAATGGGGCAAGCCAT 57.452 45.000 13.87 0.00 37.98 4.40
567 568 2.548464 TCTTAATGGGGCAAGCCATT 57.452 45.000 13.87 10.68 39.54 3.16
568 569 2.831565 TCTTAATGGGGCAAGCCATTT 58.168 42.857 13.87 5.63 37.71 2.32
569 570 3.987745 TCTTAATGGGGCAAGCCATTTA 58.012 40.909 13.87 4.69 37.71 1.40
570 571 4.555689 TCTTAATGGGGCAAGCCATTTAT 58.444 39.130 13.87 0.00 37.71 1.40
571 572 4.968080 TCTTAATGGGGCAAGCCATTTATT 59.032 37.500 13.87 9.39 37.71 1.40
572 573 3.843893 AATGGGGCAAGCCATTTATTC 57.156 42.857 13.87 0.00 37.98 1.75
573 574 2.548464 TGGGGCAAGCCATTTATTCT 57.452 45.000 13.87 0.00 37.98 2.40
574 575 3.678965 TGGGGCAAGCCATTTATTCTA 57.321 42.857 13.87 0.00 37.98 2.10
575 576 3.987745 TGGGGCAAGCCATTTATTCTAA 58.012 40.909 13.87 0.00 37.98 2.10
576 577 3.704061 TGGGGCAAGCCATTTATTCTAAC 59.296 43.478 13.87 0.00 37.98 2.34
577 578 3.704061 GGGGCAAGCCATTTATTCTAACA 59.296 43.478 13.87 0.00 37.98 2.41
578 579 4.344968 GGGGCAAGCCATTTATTCTAACAT 59.655 41.667 13.87 0.00 37.98 2.71
579 580 5.163311 GGGGCAAGCCATTTATTCTAACATT 60.163 40.000 13.87 0.00 37.98 2.71
580 581 6.041523 GGGGCAAGCCATTTATTCTAACATTA 59.958 38.462 13.87 0.00 37.98 1.90
581 582 7.418483 GGGGCAAGCCATTTATTCTAACATTAA 60.418 37.037 13.87 0.00 37.98 1.40
582 583 8.150296 GGGCAAGCCATTTATTCTAACATTAAT 58.850 33.333 13.87 0.00 37.98 1.40
583 584 9.196552 GGCAAGCCATTTATTCTAACATTAATC 57.803 33.333 6.14 0.00 35.81 1.75
584 585 9.971922 GCAAGCCATTTATTCTAACATTAATCT 57.028 29.630 0.00 0.00 0.00 2.40
631 632 8.747538 AAGAGCAAACCTAAACTTCTCTAAAA 57.252 30.769 0.00 0.00 0.00 1.52
693 694 6.750148 TGGATTAAACCAACTTAAACGCATT 58.250 32.000 1.25 0.00 36.96 3.56
698 700 6.380095 AAACCAACTTAAACGCATTCACTA 57.620 33.333 0.00 0.00 0.00 2.74
744 746 2.094675 CCCAAATCAACGCCTCAGATT 58.905 47.619 0.00 0.00 33.68 2.40
825 828 1.912220 CGTGGCCCTCCCTGATTTA 59.088 57.895 0.00 0.00 0.00 1.40
868 871 5.163488 TGACACGATATCCTTAACAACCGAT 60.163 40.000 0.00 0.00 0.00 4.18
898 907 6.071840 TCCTTTTTCTCTCTACCTCTTTCTCG 60.072 42.308 0.00 0.00 0.00 4.04
899 908 5.646577 TTTTCTCTCTACCTCTTTCTCGG 57.353 43.478 0.00 0.00 0.00 4.63
921 931 0.843343 AAAAACCGCTCCCTCCCCTA 60.843 55.000 0.00 0.00 0.00 3.53
922 932 1.272554 AAAACCGCTCCCTCCCCTAG 61.273 60.000 0.00 0.00 0.00 3.02
948 958 2.765807 CCGCAGACCTCTCCCCAT 60.766 66.667 0.00 0.00 0.00 4.00
968 978 4.508128 CCCCATCACCCGTCGTCG 62.508 72.222 0.00 0.00 0.00 5.12
969 979 3.755628 CCCATCACCCGTCGTCGT 61.756 66.667 0.71 0.00 35.01 4.34
970 980 2.202570 CCATCACCCGTCGTCGTC 60.203 66.667 0.71 0.00 35.01 4.20
971 981 2.576053 CATCACCCGTCGTCGTCG 60.576 66.667 4.87 4.87 38.55 5.12
972 982 4.471726 ATCACCCGTCGTCGTCGC 62.472 66.667 6.36 0.00 36.96 5.19
1149 1187 3.569049 CTCACGCTTCCGGACGGTT 62.569 63.158 17.60 0.00 39.22 4.44
1233 1271 0.878523 CGCTCACCGACAAGGAACAA 60.879 55.000 0.00 0.00 45.00 2.83
1239 1277 3.070446 TCACCGACAAGGAACAATACTGT 59.930 43.478 0.00 0.00 45.00 3.55
1246 1284 1.135083 AGGAACAATACTGTCGCGAGG 60.135 52.381 10.24 8.44 33.45 4.63
1249 1287 1.141881 CAATACTGTCGCGAGGGCT 59.858 57.895 10.24 0.00 36.88 5.19
1289 1327 2.363147 GGAGGCAGAGAGGTCCGT 60.363 66.667 0.00 0.00 0.00 4.69
1298 1336 0.107752 GAGAGGTCCGTCGTAGAGGT 60.108 60.000 0.00 0.00 41.34 3.85
1313 1351 3.717294 GGTGATCCAGGTGCCGGT 61.717 66.667 1.90 0.00 0.00 5.28
1350 1388 1.270274 GTGAATGCCACACATCAGCAA 59.730 47.619 0.00 0.00 45.03 3.91
1439 1494 3.561143 TGTTTGAGGTAATGCCAACTGT 58.439 40.909 0.00 0.00 40.61 3.55
1460 1515 8.816640 ACTGTGTTGCTTTTTGATTAATTAGG 57.183 30.769 0.00 0.00 0.00 2.69
1474 1529 9.967451 TTGATTAATTAGGTCAGTTACATGGAA 57.033 29.630 0.00 0.00 0.00 3.53
1581 1636 0.035915 GGGAGCTTGGAGGAAGTGAC 60.036 60.000 0.00 0.00 33.73 3.67
1687 1743 9.838975 GTTTGTTGAAATTTGATTCCAGTTTTT 57.161 25.926 0.00 0.00 0.00 1.94
1755 1839 3.616821 TGAACAAGTATGCGCAGATGTAC 59.383 43.478 18.32 13.61 0.00 2.90
1823 1925 7.568349 TGGAATCTACACAAGCTAAGAATCAT 58.432 34.615 0.00 0.00 0.00 2.45
1824 1926 8.049117 TGGAATCTACACAAGCTAAGAATCATT 58.951 33.333 0.00 0.00 0.00 2.57
1830 1932 9.539825 CTACACAAGCTAAGAATCATTCACTAT 57.460 33.333 0.00 0.00 0.00 2.12
2013 2130 2.225267 GGAAAAATTCCTCCTGTCCCCA 60.225 50.000 1.86 0.00 46.57 4.96
2120 3447 8.328758 CACTATCTCTGAGGATAGAGGTTAGAT 58.671 40.741 20.87 2.75 44.60 1.98
2121 3448 8.900802 ACTATCTCTGAGGATAGAGGTTAGATT 58.099 37.037 20.87 3.61 44.60 2.40
2122 3449 9.177608 CTATCTCTGAGGATAGAGGTTAGATTG 57.822 40.741 4.59 0.00 44.60 2.67
2123 3450 6.310941 TCTCTGAGGATAGAGGTTAGATTGG 58.689 44.000 4.59 0.00 43.48 3.16
2430 3762 0.040781 CCTTTGGCGTTAACCGTGTG 60.041 55.000 0.00 0.00 39.32 3.82
2511 3872 7.952671 AGTATAATGGAGCGAACATTCTTAGA 58.047 34.615 6.80 0.00 39.18 2.10
2625 3988 0.827368 TGCGGGTATCACATGCTACA 59.173 50.000 0.00 0.00 0.00 2.74
2789 4315 4.229582 TCCCCCTGCTGTTATGAATTACTT 59.770 41.667 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.648059 ACTCCTATTGCACTGAATGGC 58.352 47.619 0.00 0.00 0.00 4.40
6 7 4.990257 CAAACTCCTATTGCACTGAATGG 58.010 43.478 0.00 0.00 0.00 3.16
16 17 5.389859 TCCAAACATGCAAACTCCTATTG 57.610 39.130 0.00 0.00 0.00 1.90
17 18 6.183360 GCTATCCAAACATGCAAACTCCTATT 60.183 38.462 0.00 0.00 0.00 1.73
18 19 5.300286 GCTATCCAAACATGCAAACTCCTAT 59.700 40.000 0.00 0.00 0.00 2.57
19 20 4.640201 GCTATCCAAACATGCAAACTCCTA 59.360 41.667 0.00 0.00 0.00 2.94
20 21 3.445096 GCTATCCAAACATGCAAACTCCT 59.555 43.478 0.00 0.00 0.00 3.69
21 22 3.429410 GGCTATCCAAACATGCAAACTCC 60.429 47.826 0.00 0.00 0.00 3.85
22 23 3.193267 TGGCTATCCAAACATGCAAACTC 59.807 43.478 0.00 0.00 39.99 3.01
23 24 3.164268 TGGCTATCCAAACATGCAAACT 58.836 40.909 0.00 0.00 39.99 2.66
24 25 3.591196 TGGCTATCCAAACATGCAAAC 57.409 42.857 0.00 0.00 39.99 2.93
55 56 8.416329 GCACATTTAGAGATCAAACCCATAATT 58.584 33.333 0.00 0.00 0.00 1.40
56 57 7.781693 AGCACATTTAGAGATCAAACCCATAAT 59.218 33.333 0.00 0.00 0.00 1.28
57 58 7.118723 AGCACATTTAGAGATCAAACCCATAA 58.881 34.615 0.00 0.00 0.00 1.90
58 59 6.662755 AGCACATTTAGAGATCAAACCCATA 58.337 36.000 0.00 0.00 0.00 2.74
59 60 5.513233 AGCACATTTAGAGATCAAACCCAT 58.487 37.500 0.00 0.00 0.00 4.00
60 61 4.922206 AGCACATTTAGAGATCAAACCCA 58.078 39.130 0.00 0.00 0.00 4.51
61 62 5.415701 TCAAGCACATTTAGAGATCAAACCC 59.584 40.000 0.00 0.00 0.00 4.11
62 63 6.500684 TCAAGCACATTTAGAGATCAAACC 57.499 37.500 0.00 0.00 0.00 3.27
63 64 7.362662 TGTTCAAGCACATTTAGAGATCAAAC 58.637 34.615 0.00 0.00 0.00 2.93
64 65 7.509141 TGTTCAAGCACATTTAGAGATCAAA 57.491 32.000 0.00 0.00 0.00 2.69
65 66 7.692460 ATGTTCAAGCACATTTAGAGATCAA 57.308 32.000 0.00 0.00 33.29 2.57
66 67 8.791327 TTATGTTCAAGCACATTTAGAGATCA 57.209 30.769 0.00 0.00 38.40 2.92
67 68 9.875675 GATTATGTTCAAGCACATTTAGAGATC 57.124 33.333 0.00 0.00 38.40 2.75
68 69 9.399797 TGATTATGTTCAAGCACATTTAGAGAT 57.600 29.630 0.00 0.00 38.40 2.75
69 70 8.791327 TGATTATGTTCAAGCACATTTAGAGA 57.209 30.769 0.00 0.00 38.40 3.10
70 71 9.499585 CTTGATTATGTTCAAGCACATTTAGAG 57.500 33.333 6.55 0.00 44.30 2.43
83 84 9.739276 ACATCTTCCTTAACTTGATTATGTTCA 57.261 29.630 0.00 0.00 0.00 3.18
85 86 8.883731 CGACATCTTCCTTAACTTGATTATGTT 58.116 33.333 0.00 0.00 0.00 2.71
86 87 7.011482 GCGACATCTTCCTTAACTTGATTATGT 59.989 37.037 0.00 0.00 0.00 2.29
87 88 7.348201 GCGACATCTTCCTTAACTTGATTATG 58.652 38.462 0.00 0.00 0.00 1.90
88 89 6.201044 CGCGACATCTTCCTTAACTTGATTAT 59.799 38.462 0.00 0.00 0.00 1.28
89 90 5.518847 CGCGACATCTTCCTTAACTTGATTA 59.481 40.000 0.00 0.00 0.00 1.75
90 91 4.330074 CGCGACATCTTCCTTAACTTGATT 59.670 41.667 0.00 0.00 0.00 2.57
91 92 3.865745 CGCGACATCTTCCTTAACTTGAT 59.134 43.478 0.00 0.00 0.00 2.57
92 93 3.250744 CGCGACATCTTCCTTAACTTGA 58.749 45.455 0.00 0.00 0.00 3.02
93 94 2.993899 ACGCGACATCTTCCTTAACTTG 59.006 45.455 15.93 0.00 0.00 3.16
94 95 3.251571 GACGCGACATCTTCCTTAACTT 58.748 45.455 15.93 0.00 0.00 2.66
95 96 2.731341 CGACGCGACATCTTCCTTAACT 60.731 50.000 15.93 0.00 0.00 2.24
96 97 1.582502 CGACGCGACATCTTCCTTAAC 59.417 52.381 15.93 0.00 0.00 2.01
97 98 1.904144 CGACGCGACATCTTCCTTAA 58.096 50.000 15.93 0.00 0.00 1.85
98 99 0.524816 GCGACGCGACATCTTCCTTA 60.525 55.000 15.93 0.00 0.00 2.69
99 100 1.805945 GCGACGCGACATCTTCCTT 60.806 57.895 15.93 0.00 0.00 3.36
100 101 2.202623 GCGACGCGACATCTTCCT 60.203 61.111 15.93 0.00 0.00 3.36
101 102 1.812214 GATGCGACGCGACATCTTCC 61.812 60.000 24.03 7.74 37.39 3.46
102 103 0.867753 AGATGCGACGCGACATCTTC 60.868 55.000 26.54 16.64 42.79 2.87
103 104 0.458543 AAGATGCGACGCGACATCTT 60.459 50.000 31.53 31.53 45.55 2.40
104 105 0.867753 GAAGATGCGACGCGACATCT 60.868 55.000 26.54 26.54 45.04 2.90
105 106 1.555538 GAAGATGCGACGCGACATC 59.444 57.895 23.96 23.96 39.08 3.06
106 107 2.224217 CGAAGATGCGACGCGACAT 61.224 57.895 15.93 13.71 0.00 3.06
107 108 2.874315 CGAAGATGCGACGCGACA 60.874 61.111 15.93 8.61 0.00 4.35
108 109 2.874780 ACGAAGATGCGACGCGAC 60.875 61.111 15.93 5.54 34.83 5.19
109 110 2.874315 CACGAAGATGCGACGCGA 60.874 61.111 15.93 4.84 34.83 5.87
110 111 3.902063 CCACGAAGATGCGACGCG 61.902 66.667 16.14 3.53 34.83 6.01
111 112 1.623081 TTTCCACGAAGATGCGACGC 61.623 55.000 14.19 14.19 34.83 5.19
112 113 0.366871 CTTTCCACGAAGATGCGACG 59.633 55.000 0.00 0.00 34.83 5.12
113 114 1.429463 ACTTTCCACGAAGATGCGAC 58.571 50.000 0.00 0.00 34.83 5.19
114 115 3.306917 TTACTTTCCACGAAGATGCGA 57.693 42.857 0.00 0.00 34.83 5.10
115 116 3.432252 ACTTTACTTTCCACGAAGATGCG 59.568 43.478 0.00 0.00 37.29 4.73
116 117 5.147162 CAACTTTACTTTCCACGAAGATGC 58.853 41.667 0.00 0.00 0.00 3.91
117 118 6.202954 AGACAACTTTACTTTCCACGAAGATG 59.797 38.462 0.00 0.00 0.00 2.90
118 119 6.289064 AGACAACTTTACTTTCCACGAAGAT 58.711 36.000 0.00 0.00 0.00 2.40
119 120 5.667466 AGACAACTTTACTTTCCACGAAGA 58.333 37.500 0.00 0.00 0.00 2.87
120 121 5.753921 AGAGACAACTTTACTTTCCACGAAG 59.246 40.000 0.00 0.00 0.00 3.79
121 122 5.667466 AGAGACAACTTTACTTTCCACGAA 58.333 37.500 0.00 0.00 0.00 3.85
122 123 5.272283 AGAGACAACTTTACTTTCCACGA 57.728 39.130 0.00 0.00 0.00 4.35
123 124 5.986004 AAGAGACAACTTTACTTTCCACG 57.014 39.130 0.00 0.00 0.00 4.94
134 135 8.422566 GCAAGGTAGGTATATAAGAGACAACTT 58.577 37.037 0.00 0.00 0.00 2.66
135 136 7.255520 CGCAAGGTAGGTATATAAGAGACAACT 60.256 40.741 0.00 0.00 0.00 3.16
136 137 6.862090 CGCAAGGTAGGTATATAAGAGACAAC 59.138 42.308 0.00 0.00 0.00 3.32
137 138 6.516194 GCGCAAGGTAGGTATATAAGAGACAA 60.516 42.308 0.30 0.00 38.28 3.18
138 139 5.048224 GCGCAAGGTAGGTATATAAGAGACA 60.048 44.000 0.30 0.00 38.28 3.41
139 140 5.400703 GCGCAAGGTAGGTATATAAGAGAC 58.599 45.833 0.30 0.00 38.28 3.36
140 141 4.461781 GGCGCAAGGTAGGTATATAAGAGA 59.538 45.833 10.83 0.00 38.28 3.10
141 142 4.219944 TGGCGCAAGGTAGGTATATAAGAG 59.780 45.833 10.83 0.00 38.28 2.85
142 143 4.154176 TGGCGCAAGGTAGGTATATAAGA 58.846 43.478 10.83 0.00 38.28 2.10
143 144 4.530710 TGGCGCAAGGTAGGTATATAAG 57.469 45.455 10.83 0.00 38.28 1.73
144 145 5.492855 AATGGCGCAAGGTAGGTATATAA 57.507 39.130 10.83 0.00 38.28 0.98
145 146 5.242434 CAAATGGCGCAAGGTAGGTATATA 58.758 41.667 10.83 0.00 38.28 0.86
146 147 4.072131 CAAATGGCGCAAGGTAGGTATAT 58.928 43.478 10.83 0.00 38.28 0.86
147 148 3.472652 CAAATGGCGCAAGGTAGGTATA 58.527 45.455 10.83 0.00 38.28 1.47
148 149 2.297701 CAAATGGCGCAAGGTAGGTAT 58.702 47.619 10.83 0.00 38.28 2.73
149 150 1.680555 CCAAATGGCGCAAGGTAGGTA 60.681 52.381 10.83 0.00 38.28 3.08
150 151 0.965363 CCAAATGGCGCAAGGTAGGT 60.965 55.000 10.83 0.00 38.28 3.08
151 152 0.965363 ACCAAATGGCGCAAGGTAGG 60.965 55.000 10.83 6.07 39.32 3.18
152 153 0.887933 AACCAAATGGCGCAAGGTAG 59.112 50.000 10.83 0.00 39.32 3.18
153 154 0.885196 GAACCAAATGGCGCAAGGTA 59.115 50.000 10.83 0.00 39.32 3.08
154 155 0.827507 AGAACCAAATGGCGCAAGGT 60.828 50.000 10.83 6.16 39.32 3.50
155 156 1.173043 TAGAACCAAATGGCGCAAGG 58.827 50.000 10.83 5.44 39.32 3.61
156 157 2.164219 ACATAGAACCAAATGGCGCAAG 59.836 45.455 10.83 0.00 39.32 4.01
157 158 2.166829 ACATAGAACCAAATGGCGCAA 58.833 42.857 10.83 0.00 39.32 4.85
158 159 1.832883 ACATAGAACCAAATGGCGCA 58.167 45.000 10.83 0.00 39.32 6.09
159 160 2.939460 AACATAGAACCAAATGGCGC 57.061 45.000 0.00 0.00 39.32 6.53
160 161 4.578516 TGGATAACATAGAACCAAATGGCG 59.421 41.667 0.00 0.00 39.32 5.69
161 162 6.463995 TTGGATAACATAGAACCAAATGGC 57.536 37.500 0.00 0.00 37.62 4.40
180 181 9.695526 GCATGCATATTTTGTTATCTTATTGGA 57.304 29.630 14.21 0.00 0.00 3.53
181 182 9.701098 AGCATGCATATTTTGTTATCTTATTGG 57.299 29.630 21.98 0.00 0.00 3.16
185 186 9.955208 CTTGAGCATGCATATTTTGTTATCTTA 57.045 29.630 21.98 0.00 0.00 2.10
186 187 8.472413 ACTTGAGCATGCATATTTTGTTATCTT 58.528 29.630 21.98 0.00 0.00 2.40
187 188 8.004087 ACTTGAGCATGCATATTTTGTTATCT 57.996 30.769 21.98 0.00 0.00 1.98
188 189 9.903682 ATACTTGAGCATGCATATTTTGTTATC 57.096 29.630 21.98 4.29 0.00 1.75
200 201 9.955208 CTTTGAAAATATATACTTGAGCATGCA 57.045 29.630 21.98 0.00 0.00 3.96
231 232 9.413734 CCCTTTAAGATGAAAATGAAGGATAGT 57.586 33.333 0.00 0.00 35.36 2.12
232 233 9.413734 ACCCTTTAAGATGAAAATGAAGGATAG 57.586 33.333 0.00 0.00 35.36 2.08
233 234 9.768215 AACCCTTTAAGATGAAAATGAAGGATA 57.232 29.630 0.00 0.00 35.36 2.59
234 235 8.670521 AACCCTTTAAGATGAAAATGAAGGAT 57.329 30.769 0.00 0.00 35.36 3.24
235 236 8.367156 CAAACCCTTTAAGATGAAAATGAAGGA 58.633 33.333 0.00 0.00 35.36 3.36
236 237 8.367156 TCAAACCCTTTAAGATGAAAATGAAGG 58.633 33.333 0.00 0.00 33.63 3.46
237 238 9.762933 TTCAAACCCTTTAAGATGAAAATGAAG 57.237 29.630 0.00 0.00 0.00 3.02
245 246 9.020731 GGTTCTAATTCAAACCCTTTAAGATGA 57.979 33.333 9.70 0.00 39.23 2.92
256 257 6.008331 ACCACTTAGGGTTCTAATTCAAACC 58.992 40.000 11.67 11.67 43.89 3.27
269 270 6.789457 AGTAGGTTTTAGTAACCACTTAGGGT 59.211 38.462 9.17 0.00 45.04 4.34
270 271 7.250032 AGTAGGTTTTAGTAACCACTTAGGG 57.750 40.000 9.17 0.00 42.69 3.53
271 272 8.591940 AGAAGTAGGTTTTAGTAACCACTTAGG 58.408 37.037 16.85 0.00 42.69 2.69
275 276 9.939802 CATTAGAAGTAGGTTTTAGTAACCACT 57.060 33.333 9.17 7.45 42.69 4.00
276 277 9.933723 TCATTAGAAGTAGGTTTTAGTAACCAC 57.066 33.333 9.17 5.60 42.69 4.16
300 301 9.932699 CAAGTGTTTTGCAAATATTTGAATTCA 57.067 25.926 28.33 15.28 40.55 2.57
301 302 9.384682 CCAAGTGTTTTGCAAATATTTGAATTC 57.615 29.630 28.33 13.08 40.55 2.17
302 303 8.351461 CCCAAGTGTTTTGCAAATATTTGAATT 58.649 29.630 28.33 11.25 40.55 2.17
303 304 7.501892 ACCCAAGTGTTTTGCAAATATTTGAAT 59.498 29.630 28.33 5.98 40.55 2.57
304 305 6.825721 ACCCAAGTGTTTTGCAAATATTTGAA 59.174 30.769 28.33 17.93 40.55 2.69
305 306 6.352516 ACCCAAGTGTTTTGCAAATATTTGA 58.647 32.000 28.33 12.85 40.55 2.69
306 307 6.616774 ACCCAAGTGTTTTGCAAATATTTG 57.383 33.333 21.54 21.54 41.03 2.32
307 308 7.337942 TCAAACCCAAGTGTTTTGCAAATATTT 59.662 29.630 13.65 5.86 36.33 1.40
308 309 6.825721 TCAAACCCAAGTGTTTTGCAAATATT 59.174 30.769 13.65 3.00 36.33 1.28
309 310 6.259829 GTCAAACCCAAGTGTTTTGCAAATAT 59.740 34.615 13.65 0.00 36.33 1.28
310 311 5.582665 GTCAAACCCAAGTGTTTTGCAAATA 59.417 36.000 13.65 2.47 36.33 1.40
311 312 4.394610 GTCAAACCCAAGTGTTTTGCAAAT 59.605 37.500 13.65 0.00 36.33 2.32
312 313 3.748568 GTCAAACCCAAGTGTTTTGCAAA 59.251 39.130 8.05 8.05 36.33 3.68
313 314 3.244215 TGTCAAACCCAAGTGTTTTGCAA 60.244 39.130 0.00 0.00 36.33 4.08
314 315 2.300152 TGTCAAACCCAAGTGTTTTGCA 59.700 40.909 0.00 0.00 36.33 4.08
315 316 2.966050 TGTCAAACCCAAGTGTTTTGC 58.034 42.857 0.00 0.00 36.33 3.68
316 317 3.870419 CCATGTCAAACCCAAGTGTTTTG 59.130 43.478 0.00 0.00 36.33 2.44
317 318 3.517500 ACCATGTCAAACCCAAGTGTTTT 59.482 39.130 0.00 0.00 36.33 2.43
318 319 3.103742 ACCATGTCAAACCCAAGTGTTT 58.896 40.909 0.00 0.00 38.95 2.83
319 320 2.693074 GACCATGTCAAACCCAAGTGTT 59.307 45.455 0.00 0.00 32.09 3.32
320 321 2.091885 AGACCATGTCAAACCCAAGTGT 60.092 45.455 0.00 0.00 34.60 3.55
321 322 2.554032 GAGACCATGTCAAACCCAAGTG 59.446 50.000 0.00 0.00 34.60 3.16
322 323 2.443255 AGAGACCATGTCAAACCCAAGT 59.557 45.455 0.00 0.00 34.60 3.16
323 324 2.816087 CAGAGACCATGTCAAACCCAAG 59.184 50.000 0.00 0.00 34.60 3.61
324 325 2.862541 CAGAGACCATGTCAAACCCAA 58.137 47.619 0.00 0.00 34.60 4.12
325 326 1.545428 GCAGAGACCATGTCAAACCCA 60.545 52.381 0.00 0.00 34.60 4.51
326 327 1.168714 GCAGAGACCATGTCAAACCC 58.831 55.000 0.00 0.00 34.60 4.11
327 328 1.537202 GTGCAGAGACCATGTCAAACC 59.463 52.381 0.00 0.00 34.60 3.27
328 329 2.498167 AGTGCAGAGACCATGTCAAAC 58.502 47.619 0.00 0.00 34.60 2.93
329 330 2.880268 CAAGTGCAGAGACCATGTCAAA 59.120 45.455 0.00 0.00 34.60 2.69
330 331 2.497138 CAAGTGCAGAGACCATGTCAA 58.503 47.619 0.00 0.00 34.60 3.18
331 332 1.879372 GCAAGTGCAGAGACCATGTCA 60.879 52.381 0.00 0.00 41.59 3.58
332 333 0.801251 GCAAGTGCAGAGACCATGTC 59.199 55.000 0.00 0.00 41.59 3.06
333 334 0.399454 AGCAAGTGCAGAGACCATGT 59.601 50.000 6.00 0.00 45.16 3.21
334 335 1.085091 GAGCAAGTGCAGAGACCATG 58.915 55.000 6.00 0.00 45.16 3.66
335 336 0.689055 TGAGCAAGTGCAGAGACCAT 59.311 50.000 6.00 0.00 45.16 3.55
336 337 0.469494 TTGAGCAAGTGCAGAGACCA 59.531 50.000 6.00 0.00 45.16 4.02
337 338 1.265365 GTTTGAGCAAGTGCAGAGACC 59.735 52.381 6.00 0.00 45.16 3.85
338 339 1.942657 TGTTTGAGCAAGTGCAGAGAC 59.057 47.619 6.00 0.15 45.16 3.36
339 340 2.330440 TGTTTGAGCAAGTGCAGAGA 57.670 45.000 6.00 0.00 45.16 3.10
340 341 4.754372 TTATGTTTGAGCAAGTGCAGAG 57.246 40.909 6.00 0.00 45.16 3.35
341 342 4.580167 ACTTTATGTTTGAGCAAGTGCAGA 59.420 37.500 6.00 0.00 45.16 4.26
342 343 4.863491 ACTTTATGTTTGAGCAAGTGCAG 58.137 39.130 6.00 0.00 45.16 4.41
343 344 4.916983 ACTTTATGTTTGAGCAAGTGCA 57.083 36.364 6.00 0.00 45.16 4.57
344 345 6.360681 CAGTAACTTTATGTTTGAGCAAGTGC 59.639 38.462 0.00 0.00 39.89 4.40
345 346 7.639039 TCAGTAACTTTATGTTTGAGCAAGTG 58.361 34.615 0.00 0.00 39.89 3.16
346 347 7.801716 TCAGTAACTTTATGTTTGAGCAAGT 57.198 32.000 0.00 0.00 39.89 3.16
347 348 9.515020 TTTTCAGTAACTTTATGTTTGAGCAAG 57.485 29.630 0.00 0.00 39.89 4.01
348 349 9.862371 TTTTTCAGTAACTTTATGTTTGAGCAA 57.138 25.926 0.00 0.00 39.89 3.91
371 372 5.607206 CACGCGTTGAAAATATGCATTTTT 58.393 33.333 10.22 6.94 42.97 1.94
372 373 4.434067 GCACGCGTTGAAAATATGCATTTT 60.434 37.500 10.22 0.03 45.06 1.82
373 374 3.060628 GCACGCGTTGAAAATATGCATTT 59.939 39.130 10.22 0.00 35.84 2.32
374 375 2.598192 GCACGCGTTGAAAATATGCATT 59.402 40.909 10.22 0.00 0.00 3.56
375 376 2.184448 GCACGCGTTGAAAATATGCAT 58.816 42.857 10.22 3.79 0.00 3.96
376 377 1.068954 TGCACGCGTTGAAAATATGCA 60.069 42.857 10.22 10.48 39.16 3.96
377 378 1.612156 TGCACGCGTTGAAAATATGC 58.388 45.000 10.22 7.40 0.00 3.14
378 379 2.531103 CCATGCACGCGTTGAAAATATG 59.469 45.455 10.22 6.57 0.00 1.78
379 380 2.163412 ACCATGCACGCGTTGAAAATAT 59.837 40.909 10.22 0.00 0.00 1.28
380 381 1.537638 ACCATGCACGCGTTGAAAATA 59.462 42.857 10.22 0.00 0.00 1.40
381 382 0.313672 ACCATGCACGCGTTGAAAAT 59.686 45.000 10.22 0.00 0.00 1.82
382 383 0.101399 AACCATGCACGCGTTGAAAA 59.899 45.000 10.22 0.00 0.00 2.29
383 384 0.101399 AAACCATGCACGCGTTGAAA 59.899 45.000 10.22 0.00 0.00 2.69
384 385 0.101399 AAAACCATGCACGCGTTGAA 59.899 45.000 10.22 0.00 0.00 2.69
385 386 0.945099 TAAAACCATGCACGCGTTGA 59.055 45.000 10.22 0.00 0.00 3.18
386 387 1.759994 TTAAAACCATGCACGCGTTG 58.240 45.000 10.22 5.55 0.00 4.10
387 388 2.493713 TTTAAAACCATGCACGCGTT 57.506 40.000 10.22 0.00 0.00 4.84
388 389 2.323959 CATTTAAAACCATGCACGCGT 58.676 42.857 5.58 5.58 0.00 6.01
389 390 1.653114 CCATTTAAAACCATGCACGCG 59.347 47.619 3.53 3.53 0.00 6.01
390 391 2.953020 TCCATTTAAAACCATGCACGC 58.047 42.857 0.00 0.00 0.00 5.34
391 392 4.997565 AGATCCATTTAAAACCATGCACG 58.002 39.130 0.00 0.00 0.00 5.34
392 393 6.038356 CAGAGATCCATTTAAAACCATGCAC 58.962 40.000 0.00 0.00 0.00 4.57
393 394 5.394443 GCAGAGATCCATTTAAAACCATGCA 60.394 40.000 0.00 0.00 0.00 3.96
394 395 5.045872 GCAGAGATCCATTTAAAACCATGC 58.954 41.667 0.00 0.00 0.00 4.06
395 396 5.276270 CGCAGAGATCCATTTAAAACCATG 58.724 41.667 0.00 0.00 0.00 3.66
396 397 4.202050 GCGCAGAGATCCATTTAAAACCAT 60.202 41.667 0.30 0.00 0.00 3.55
397 398 3.128589 GCGCAGAGATCCATTTAAAACCA 59.871 43.478 0.30 0.00 0.00 3.67
398 399 3.489229 GGCGCAGAGATCCATTTAAAACC 60.489 47.826 10.83 0.00 0.00 3.27
399 400 3.128589 TGGCGCAGAGATCCATTTAAAAC 59.871 43.478 10.83 0.00 0.00 2.43
400 401 3.351740 TGGCGCAGAGATCCATTTAAAA 58.648 40.909 10.83 0.00 0.00 1.52
401 402 2.997980 TGGCGCAGAGATCCATTTAAA 58.002 42.857 10.83 0.00 0.00 1.52
402 403 2.708216 TGGCGCAGAGATCCATTTAA 57.292 45.000 10.83 0.00 0.00 1.52
403 404 2.936919 ATGGCGCAGAGATCCATTTA 57.063 45.000 10.83 0.00 37.30 1.40
404 405 2.062971 AATGGCGCAGAGATCCATTT 57.937 45.000 10.83 0.00 45.43 2.32
405 406 3.815133 AATGGCGCAGAGATCCATT 57.185 47.368 10.83 4.73 43.57 3.16
406 407 1.315690 CAAATGGCGCAGAGATCCAT 58.684 50.000 10.83 0.00 42.01 3.41
407 408 0.749091 CCAAATGGCGCAGAGATCCA 60.749 55.000 10.83 0.00 0.00 3.41
408 409 2.028130 CCAAATGGCGCAGAGATCC 58.972 57.895 10.83 0.00 0.00 3.36
420 421 0.244450 ATGACCAGTTGCGCCAAATG 59.756 50.000 4.18 8.94 38.85 2.32
421 422 0.527565 GATGACCAGTTGCGCCAAAT 59.472 50.000 4.18 0.00 0.00 2.32
422 423 0.537143 AGATGACCAGTTGCGCCAAA 60.537 50.000 4.18 0.00 0.00 3.28
423 424 0.323302 TAGATGACCAGTTGCGCCAA 59.677 50.000 4.18 0.00 0.00 4.52
424 425 0.108186 CTAGATGACCAGTTGCGCCA 60.108 55.000 4.18 0.00 0.00 5.69
425 426 0.108138 ACTAGATGACCAGTTGCGCC 60.108 55.000 4.18 0.00 0.00 6.53
426 427 1.726853 AACTAGATGACCAGTTGCGC 58.273 50.000 0.00 0.00 33.78 6.09
427 428 8.812147 TTTATATAACTAGATGACCAGTTGCG 57.188 34.615 0.00 0.00 35.79 4.85
446 447 9.844257 CTGAGGAAGAGTTGGATCTTTTTATAT 57.156 33.333 0.00 0.00 39.63 0.86
447 448 7.770897 GCTGAGGAAGAGTTGGATCTTTTTATA 59.229 37.037 0.00 0.00 39.63 0.98
448 449 6.601217 GCTGAGGAAGAGTTGGATCTTTTTAT 59.399 38.462 0.00 0.00 39.63 1.40
449 450 5.940470 GCTGAGGAAGAGTTGGATCTTTTTA 59.060 40.000 0.00 0.00 39.63 1.52
450 451 4.764308 GCTGAGGAAGAGTTGGATCTTTTT 59.236 41.667 0.00 0.00 39.63 1.94
451 452 4.042684 AGCTGAGGAAGAGTTGGATCTTTT 59.957 41.667 0.00 0.00 39.63 2.27
452 453 3.586618 AGCTGAGGAAGAGTTGGATCTTT 59.413 43.478 0.00 0.00 39.63 2.52
453 454 3.180507 AGCTGAGGAAGAGTTGGATCTT 58.819 45.455 0.00 0.00 42.23 2.40
454 455 2.831565 AGCTGAGGAAGAGTTGGATCT 58.168 47.619 0.00 0.00 0.00 2.75
455 456 3.625649 AAGCTGAGGAAGAGTTGGATC 57.374 47.619 0.00 0.00 0.00 3.36
456 457 4.077822 CAAAAGCTGAGGAAGAGTTGGAT 58.922 43.478 0.00 0.00 0.00 3.41
457 458 3.480470 CAAAAGCTGAGGAAGAGTTGGA 58.520 45.455 0.00 0.00 0.00 3.53
458 459 2.555757 CCAAAAGCTGAGGAAGAGTTGG 59.444 50.000 0.00 0.00 0.00 3.77
459 460 2.555757 CCCAAAAGCTGAGGAAGAGTTG 59.444 50.000 0.00 0.00 0.00 3.16
460 461 2.489802 CCCCAAAAGCTGAGGAAGAGTT 60.490 50.000 0.00 0.00 0.00 3.01
461 462 1.074566 CCCCAAAAGCTGAGGAAGAGT 59.925 52.381 0.00 0.00 0.00 3.24
462 463 1.074566 ACCCCAAAAGCTGAGGAAGAG 59.925 52.381 0.00 0.00 0.00 2.85
463 464 1.149101 ACCCCAAAAGCTGAGGAAGA 58.851 50.000 0.00 0.00 0.00 2.87
464 465 1.202927 TCACCCCAAAAGCTGAGGAAG 60.203 52.381 0.00 0.00 0.00 3.46
465 466 0.850100 TCACCCCAAAAGCTGAGGAA 59.150 50.000 0.00 0.00 0.00 3.36
466 467 0.401738 CTCACCCCAAAAGCTGAGGA 59.598 55.000 0.00 0.00 0.00 3.71
467 468 0.401738 TCTCACCCCAAAAGCTGAGG 59.598 55.000 0.00 0.00 32.52 3.86
468 469 1.072965 AGTCTCACCCCAAAAGCTGAG 59.927 52.381 0.00 0.00 32.86 3.35
469 470 1.140312 AGTCTCACCCCAAAAGCTGA 58.860 50.000 0.00 0.00 0.00 4.26
470 471 2.859165 TAGTCTCACCCCAAAAGCTG 57.141 50.000 0.00 0.00 0.00 4.24
471 472 3.138468 AGTTTAGTCTCACCCCAAAAGCT 59.862 43.478 0.00 0.00 0.00 3.74
472 473 3.487372 AGTTTAGTCTCACCCCAAAAGC 58.513 45.455 0.00 0.00 0.00 3.51
473 474 6.531021 TCTAAGTTTAGTCTCACCCCAAAAG 58.469 40.000 0.00 0.00 32.61 2.27
474 475 6.503560 TCTAAGTTTAGTCTCACCCCAAAA 57.496 37.500 0.00 0.00 32.61 2.44
475 476 5.512576 GCTCTAAGTTTAGTCTCACCCCAAA 60.513 44.000 0.00 0.00 32.61 3.28
476 477 4.020485 GCTCTAAGTTTAGTCTCACCCCAA 60.020 45.833 0.00 0.00 32.61 4.12
477 478 3.514309 GCTCTAAGTTTAGTCTCACCCCA 59.486 47.826 0.00 0.00 32.61 4.96
478 479 3.118702 GGCTCTAAGTTTAGTCTCACCCC 60.119 52.174 0.00 0.00 32.61 4.95
479 480 3.514309 TGGCTCTAAGTTTAGTCTCACCC 59.486 47.826 0.00 0.00 32.61 4.61
480 481 4.496360 GTGGCTCTAAGTTTAGTCTCACC 58.504 47.826 0.00 0.00 32.61 4.02
481 482 4.021368 TGGTGGCTCTAAGTTTAGTCTCAC 60.021 45.833 0.00 6.01 32.61 3.51
482 483 4.021368 GTGGTGGCTCTAAGTTTAGTCTCA 60.021 45.833 0.00 0.00 32.61 3.27
483 484 4.221041 AGTGGTGGCTCTAAGTTTAGTCTC 59.779 45.833 0.00 0.00 32.61 3.36
484 485 4.161102 AGTGGTGGCTCTAAGTTTAGTCT 58.839 43.478 0.00 0.00 32.61 3.24
485 486 4.538746 AGTGGTGGCTCTAAGTTTAGTC 57.461 45.455 0.00 0.00 32.61 2.59
486 487 4.642429 CAAGTGGTGGCTCTAAGTTTAGT 58.358 43.478 0.00 0.00 32.61 2.24
487 488 3.437049 GCAAGTGGTGGCTCTAAGTTTAG 59.563 47.826 0.00 0.00 0.00 1.85
488 489 3.072476 AGCAAGTGGTGGCTCTAAGTTTA 59.928 43.478 0.00 0.00 34.76 2.01
489 490 2.158608 AGCAAGTGGTGGCTCTAAGTTT 60.159 45.455 0.00 0.00 34.76 2.66
490 491 1.421646 AGCAAGTGGTGGCTCTAAGTT 59.578 47.619 0.00 0.00 34.76 2.66
491 492 1.059913 AGCAAGTGGTGGCTCTAAGT 58.940 50.000 0.00 0.00 34.76 2.24
492 493 3.550437 ATAGCAAGTGGTGGCTCTAAG 57.450 47.619 0.00 0.00 41.41 2.18
493 494 4.301072 AAATAGCAAGTGGTGGCTCTAA 57.699 40.909 0.00 0.00 41.41 2.10
494 495 4.301072 AAAATAGCAAGTGGTGGCTCTA 57.699 40.909 0.00 0.00 41.41 2.43
495 496 2.887151 AAATAGCAAGTGGTGGCTCT 57.113 45.000 0.00 0.00 41.41 4.09
496 497 5.125417 TGAATAAAATAGCAAGTGGTGGCTC 59.875 40.000 0.00 0.00 41.41 4.70
497 498 5.016173 TGAATAAAATAGCAAGTGGTGGCT 58.984 37.500 0.00 0.00 43.94 4.75
498 499 5.323371 TGAATAAAATAGCAAGTGGTGGC 57.677 39.130 0.00 0.00 0.00 5.01
499 500 6.275335 CCATGAATAAAATAGCAAGTGGTGG 58.725 40.000 0.00 0.00 0.00 4.61
500 501 6.275335 CCCATGAATAAAATAGCAAGTGGTG 58.725 40.000 0.00 0.00 0.00 4.17
501 502 5.163416 GCCCATGAATAAAATAGCAAGTGGT 60.163 40.000 0.00 0.00 0.00 4.16
502 503 5.291971 GCCCATGAATAAAATAGCAAGTGG 58.708 41.667 0.00 0.00 0.00 4.00
503 504 5.163426 TGGCCCATGAATAAAATAGCAAGTG 60.163 40.000 0.00 0.00 0.00 3.16
504 505 4.961730 TGGCCCATGAATAAAATAGCAAGT 59.038 37.500 0.00 0.00 0.00 3.16
505 506 5.069516 AGTGGCCCATGAATAAAATAGCAAG 59.930 40.000 0.00 0.00 0.00 4.01
506 507 4.961730 AGTGGCCCATGAATAAAATAGCAA 59.038 37.500 0.00 0.00 0.00 3.91
507 508 4.545678 AGTGGCCCATGAATAAAATAGCA 58.454 39.130 0.00 0.00 0.00 3.49
508 509 6.840780 ATAGTGGCCCATGAATAAAATAGC 57.159 37.500 0.00 0.00 0.00 2.97
509 510 8.859090 TCAAATAGTGGCCCATGAATAAAATAG 58.141 33.333 0.00 0.00 0.00 1.73
510 511 8.774546 TCAAATAGTGGCCCATGAATAAAATA 57.225 30.769 0.00 0.00 0.00 1.40
511 512 7.564660 TCTCAAATAGTGGCCCATGAATAAAAT 59.435 33.333 0.00 0.00 0.00 1.82
512 513 6.894654 TCTCAAATAGTGGCCCATGAATAAAA 59.105 34.615 0.00 0.00 0.00 1.52
513 514 6.430864 TCTCAAATAGTGGCCCATGAATAAA 58.569 36.000 0.00 0.00 0.00 1.40
514 515 6.012337 TCTCAAATAGTGGCCCATGAATAA 57.988 37.500 0.00 0.00 0.00 1.40
515 516 5.645056 TCTCAAATAGTGGCCCATGAATA 57.355 39.130 0.00 0.00 0.00 1.75
516 517 4.524802 TCTCAAATAGTGGCCCATGAAT 57.475 40.909 0.00 0.00 0.00 2.57
517 518 4.524802 ATCTCAAATAGTGGCCCATGAA 57.475 40.909 0.00 0.00 0.00 2.57
518 519 4.524802 AATCTCAAATAGTGGCCCATGA 57.475 40.909 0.00 0.00 0.00 3.07
519 520 4.646040 TGAAATCTCAAATAGTGGCCCATG 59.354 41.667 0.00 0.00 0.00 3.66
520 521 4.870636 TGAAATCTCAAATAGTGGCCCAT 58.129 39.130 0.00 0.00 0.00 4.00
521 522 4.018506 TCTGAAATCTCAAATAGTGGCCCA 60.019 41.667 0.00 0.00 0.00 5.36
522 523 4.526970 TCTGAAATCTCAAATAGTGGCCC 58.473 43.478 0.00 0.00 0.00 5.80
523 524 6.705863 ATTCTGAAATCTCAAATAGTGGCC 57.294 37.500 0.00 0.00 0.00 5.36
524 525 8.465201 AGAAATTCTGAAATCTCAAATAGTGGC 58.535 33.333 0.00 0.00 0.00 5.01
532 533 8.752187 CCCCATTAAGAAATTCTGAAATCTCAA 58.248 33.333 0.00 3.11 0.00 3.02
533 534 7.147846 GCCCCATTAAGAAATTCTGAAATCTCA 60.148 37.037 0.00 2.04 0.00 3.27
534 535 7.147846 TGCCCCATTAAGAAATTCTGAAATCTC 60.148 37.037 0.00 0.63 0.00 2.75
535 536 6.669154 TGCCCCATTAAGAAATTCTGAAATCT 59.331 34.615 0.00 0.00 0.00 2.40
536 537 6.877236 TGCCCCATTAAGAAATTCTGAAATC 58.123 36.000 0.00 0.00 0.00 2.17
537 538 6.872585 TGCCCCATTAAGAAATTCTGAAAT 57.127 33.333 0.00 0.00 0.00 2.17
538 539 6.678568 TTGCCCCATTAAGAAATTCTGAAA 57.321 33.333 0.00 0.00 0.00 2.69
539 540 5.337491 GCTTGCCCCATTAAGAAATTCTGAA 60.337 40.000 0.00 0.00 0.00 3.02
540 541 4.160252 GCTTGCCCCATTAAGAAATTCTGA 59.840 41.667 0.00 0.00 0.00 3.27
541 542 4.436332 GCTTGCCCCATTAAGAAATTCTG 58.564 43.478 0.00 0.00 0.00 3.02
542 543 3.452264 GGCTTGCCCCATTAAGAAATTCT 59.548 43.478 0.00 0.00 0.00 2.40
543 544 3.197549 TGGCTTGCCCCATTAAGAAATTC 59.802 43.478 9.35 0.00 0.00 2.17
544 545 3.180507 TGGCTTGCCCCATTAAGAAATT 58.819 40.909 9.35 0.00 0.00 1.82
545 546 2.831565 TGGCTTGCCCCATTAAGAAAT 58.168 42.857 9.35 0.00 0.00 2.17
546 547 2.317371 TGGCTTGCCCCATTAAGAAA 57.683 45.000 9.35 0.00 0.00 2.52
547 548 2.548464 ATGGCTTGCCCCATTAAGAA 57.452 45.000 9.35 0.00 42.92 2.52
554 555 2.548464 AGAATAAATGGCTTGCCCCA 57.452 45.000 9.35 0.00 39.65 4.96
555 556 3.704061 TGTTAGAATAAATGGCTTGCCCC 59.296 43.478 9.35 0.00 0.00 5.80
556 557 5.535753 ATGTTAGAATAAATGGCTTGCCC 57.464 39.130 9.35 0.00 0.00 5.36
557 558 9.196552 GATTAATGTTAGAATAAATGGCTTGCC 57.803 33.333 4.43 4.43 0.00 4.52
558 559 9.971922 AGATTAATGTTAGAATAAATGGCTTGC 57.028 29.630 0.00 0.00 0.00 4.01
631 632 3.311322 CCGTGTACAGTTTGTTGTGTGAT 59.689 43.478 0.00 0.00 32.56 3.06
698 700 8.263640 GTGGCAGACTATTGATCTAATATGGAT 58.736 37.037 0.00 0.00 31.12 3.41
825 828 3.946907 GCACTAACTGCGTTCCGT 58.053 55.556 0.00 0.00 35.72 4.69
868 871 7.560796 AGAGGTAGAGAGAAAAAGGAAATCA 57.439 36.000 0.00 0.00 0.00 2.57
1149 1187 3.636231 CAGGGGACGGTTGAGGCA 61.636 66.667 0.00 0.00 0.00 4.75
1233 1271 2.491022 GGAGCCCTCGCGACAGTAT 61.491 63.158 3.71 0.00 41.18 2.12
1249 1287 4.680237 CTTGCGTCGCACCTGGGA 62.680 66.667 21.61 2.72 38.71 4.37
1289 1327 1.763968 CACCTGGATCACCTCTACGA 58.236 55.000 0.00 0.00 37.04 3.43
1298 1336 2.606213 TCACCGGCACCTGGATCA 60.606 61.111 0.00 0.00 0.00 2.92
1313 1351 1.132849 TCACCACCTTCTTCCTCCTCA 60.133 52.381 0.00 0.00 0.00 3.86
1350 1388 3.461773 CTGGCGTGGGAGGACGAT 61.462 66.667 0.00 0.00 42.10 3.73
1406 1461 8.458843 GCATTACCTCAAACAGTTTATGTGTAT 58.541 33.333 0.00 0.00 43.00 2.29
1408 1463 6.294508 GGCATTACCTCAAACAGTTTATGTGT 60.295 38.462 0.00 0.00 37.62 3.72
1439 1494 8.637986 ACTGACCTAATTAATCAAAAAGCAACA 58.362 29.630 0.00 0.00 0.00 3.33
1633 1688 1.534729 GTCCCACTAACCCAAGCAAG 58.465 55.000 0.00 0.00 0.00 4.01
1663 1718 8.672815 GGAAAAACTGGAATCAAATTTCAACAA 58.327 29.630 0.00 0.00 0.00 2.83
1687 1743 6.701145 TTTGTTTACAACTTACAGCATGGA 57.299 33.333 0.00 0.00 36.40 3.41
1773 1872 3.626924 ACCACTCACCGCACCCTC 61.627 66.667 0.00 0.00 0.00 4.30
1823 1925 0.846015 CCCCAGCATCCCATAGTGAA 59.154 55.000 0.00 0.00 0.00 3.18
1824 1926 1.708993 GCCCCAGCATCCCATAGTGA 61.709 60.000 0.00 0.00 39.53 3.41
1830 1932 3.267233 AACAGCCCCAGCATCCCA 61.267 61.111 0.00 0.00 43.56 4.37
2120 3447 3.168035 AGGATAACATGTTGCCACCAA 57.832 42.857 25.14 6.31 0.00 3.67
2121 3448 2.897271 AGGATAACATGTTGCCACCA 57.103 45.000 25.14 6.95 0.00 4.17
2122 3449 3.616219 TGTAGGATAACATGTTGCCACC 58.384 45.455 25.14 19.28 0.00 4.61
2123 3450 8.792830 ATATATGTAGGATAACATGTTGCCAC 57.207 34.615 25.14 20.97 40.29 5.01
2369 3701 7.920682 GCCCACTGTTACAATTTATATGGAAAG 59.079 37.037 0.00 0.00 0.00 2.62
2430 3762 2.155279 GTTTCTGAGCTCAACTTCCCC 58.845 52.381 18.85 0.00 0.00 4.81
2511 3872 9.482627 GACAGATAATCGGATCAGACTAAAATT 57.517 33.333 0.00 0.00 0.00 1.82
2525 3886 6.765915 TGGATCTAGATGACAGATAATCGG 57.234 41.667 10.74 0.00 32.86 4.18
2769 4295 4.949856 ACCAAGTAATTCATAACAGCAGGG 59.050 41.667 0.00 0.00 0.00 4.45
2789 4315 0.682852 AACCGAACCGATCAGAACCA 59.317 50.000 0.00 0.00 0.00 3.67
3010 4549 4.184079 AGGGTACTTAAGTGCTTGTACG 57.816 45.455 20.97 0.00 36.93 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.