Multiple sequence alignment - TraesCS3B01G278500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G278500 chr3B 100.000 2735 0 0 1 2735 448589396 448586662 0.000000e+00 5051
1 TraesCS3B01G278500 chr3B 86.323 446 42 7 2292 2721 11635849 11635407 4.120000e-128 468
2 TraesCS3B01G278500 chr3B 90.789 76 5 2 2142 2216 693083991 693084065 1.730000e-17 100
3 TraesCS3B01G278500 chr3D 93.383 1995 96 16 1 1986 349668577 349666610 0.000000e+00 2920
4 TraesCS3B01G278500 chr5D 88.367 447 37 6 2289 2721 255084605 255084160 8.680000e-145 523
5 TraesCS3B01G278500 chr5D 86.123 454 41 10 2289 2721 545283070 545282618 1.150000e-128 470
6 TraesCS3B01G278500 chr1D 86.900 458 38 9 2285 2721 37439976 37440432 6.800000e-136 494
7 TraesCS3B01G278500 chr1D 86.966 445 42 9 2293 2721 289773033 289773477 1.140000e-133 486
8 TraesCS3B01G278500 chr6B 87.082 449 39 12 2292 2721 152401385 152400937 8.800000e-135 490
9 TraesCS3B01G278500 chr6B 93.056 72 3 1 2146 2217 702668732 702668801 1.340000e-18 104
10 TraesCS3B01G278500 chr6B 91.892 74 4 2 2151 2224 421540585 421540514 4.820000e-18 102
11 TraesCS3B01G278500 chr7D 86.093 453 40 14 2289 2721 506499576 506499127 1.480000e-127 466
12 TraesCS3B01G278500 chr7D 90.000 80 6 1 2139 2216 615461488 615461409 4.820000e-18 102
13 TraesCS3B01G278500 chr5B 88.947 380 33 7 2351 2721 265436382 265436003 6.900000e-126 460
14 TraesCS3B01G278500 chr5B 84.701 451 43 20 2291 2721 272679491 272679047 7.000000e-116 427
15 TraesCS3B01G278500 chr5B 84.494 445 47 11 2291 2721 398616548 398616112 1.170000e-113 420
16 TraesCS3B01G278500 chr5B 83.772 456 49 15 2285 2721 545123021 545123470 2.540000e-110 409
17 TraesCS3B01G278500 chr5B 94.444 72 4 0 2146 2217 187861658 187861729 8.010000e-21 111
18 TraesCS3B01G278500 chr4B 86.239 436 46 10 2289 2712 316306670 316307103 6.900000e-126 460
19 TraesCS3B01G278500 chr4B 95.522 67 3 0 2151 2217 29271931 29271865 1.040000e-19 108
20 TraesCS3B01G278500 chr6D 84.257 451 57 10 2285 2721 10305141 10305591 7.000000e-116 427
21 TraesCS3B01G278500 chr7A 82.159 454 46 17 2289 2721 573833110 573832671 9.310000e-95 357
22 TraesCS3B01G278500 chr2B 95.588 68 2 1 2151 2217 234915916 234915983 1.040000e-19 108
23 TraesCS3B01G278500 chr2A 93.243 74 2 3 2152 2224 709957732 709957803 3.720000e-19 106
24 TraesCS3B01G278500 chr1B 91.892 74 6 0 2144 2217 577654889 577654962 1.340000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G278500 chr3B 448586662 448589396 2734 True 5051 5051 100.000 1 2735 1 chr3B.!!$R2 2734
1 TraesCS3B01G278500 chr3D 349666610 349668577 1967 True 2920 2920 93.383 1 1986 1 chr3D.!!$R1 1985

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 372 0.109342 CACTGTTCAGGAGCCAACCT 59.891 55.0 4.82 0.0 41.43 3.5 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2291 2301 0.100682 CGCGCTCAAGCCTTCTAGTA 59.899 55.0 5.56 0.0 37.91 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 2.397597 AGAAACTGGCCCAACAACAAT 58.602 42.857 0.00 0.00 0.00 2.71
82 83 2.771372 AGAAACTGGCCCAACAACAATT 59.229 40.909 0.00 0.00 0.00 2.32
83 84 3.199727 AGAAACTGGCCCAACAACAATTT 59.800 39.130 0.00 0.00 0.00 1.82
84 85 3.643199 AACTGGCCCAACAACAATTTT 57.357 38.095 0.00 0.00 0.00 1.82
260 261 2.047274 CTCGTCCACGGGTGCAAT 60.047 61.111 0.00 0.00 40.29 3.56
261 262 1.671054 CTCGTCCACGGGTGCAATT 60.671 57.895 0.00 0.00 40.29 2.32
262 263 1.911293 CTCGTCCACGGGTGCAATTG 61.911 60.000 0.00 0.00 40.29 2.32
263 264 2.258013 CGTCCACGGGTGCAATTGT 61.258 57.895 7.40 0.00 35.37 2.71
264 265 1.285641 GTCCACGGGTGCAATTGTG 59.714 57.895 7.40 6.50 0.00 3.33
312 314 0.249741 GCATTGCCATTCATGAGCCC 60.250 55.000 0.00 0.00 0.00 5.19
367 369 1.228245 GGCACTGTTCAGGAGCCAA 60.228 57.895 23.47 0.00 44.59 4.52
370 372 0.109342 CACTGTTCAGGAGCCAACCT 59.891 55.000 4.82 0.00 41.43 3.50
555 562 1.737355 GCCAAGTGCAGCACCAAGAA 61.737 55.000 22.41 0.00 40.77 2.52
574 581 1.714794 ACAACGAGGAGATCTTTGCG 58.285 50.000 0.00 3.59 40.03 4.85
583 590 3.008485 AGGAGATCTTTGCGTCCTTTTCT 59.992 43.478 0.00 0.00 35.84 2.52
591 598 3.125573 GTCCTTTTCTCGCCGCCC 61.126 66.667 0.00 0.00 0.00 6.13
646 653 1.079750 GGGACGCACTCTCCTTCAC 60.080 63.158 0.00 0.00 0.00 3.18
696 703 2.236146 ACCTCATCCTGTTCAACGCATA 59.764 45.455 0.00 0.00 0.00 3.14
710 717 0.999406 CGCATACGTTGGGTCTTCTG 59.001 55.000 0.00 0.00 33.74 3.02
711 718 1.403647 CGCATACGTTGGGTCTTCTGA 60.404 52.381 0.00 0.00 33.74 3.27
712 719 2.000447 GCATACGTTGGGTCTTCTGAC 59.000 52.381 0.00 0.00 42.22 3.51
713 720 2.353803 GCATACGTTGGGTCTTCTGACT 60.354 50.000 0.00 0.00 42.54 3.41
757 764 0.179142 GGGACTTCTTCGTCTACCGC 60.179 60.000 0.00 0.00 36.19 5.68
813 820 2.264480 CCCGCACACTCCGATTGA 59.736 61.111 0.00 0.00 0.00 2.57
829 836 3.428999 CGATTGACAGTATCCACGAGGTT 60.429 47.826 0.00 0.00 35.89 3.50
859 869 4.838152 CGCGGCTGCCACCACTAT 62.838 66.667 20.29 0.00 38.08 2.12
863 873 3.204827 GCTGCCACCACTATGCCG 61.205 66.667 0.00 0.00 0.00 5.69
886 896 3.499737 GCGCTCGTTCCCCATGTG 61.500 66.667 0.00 0.00 0.00 3.21
890 900 2.033448 TCGTTCCCCATGTGCACC 59.967 61.111 15.69 0.00 0.00 5.01
892 902 2.625823 CGTTCCCCATGTGCACCAC 61.626 63.158 15.69 0.00 34.56 4.16
893 903 2.117206 TTCCCCATGTGCACCACC 59.883 61.111 15.69 0.00 32.73 4.61
917 927 0.846693 AGCAGTTTTGTCCTCCACCT 59.153 50.000 0.00 0.00 0.00 4.00
922 932 1.954382 GTTTTGTCCTCCACCTGTTCC 59.046 52.381 0.00 0.00 0.00 3.62
923 933 1.518367 TTTGTCCTCCACCTGTTCCT 58.482 50.000 0.00 0.00 0.00 3.36
996 1006 1.226262 GCCTTTCCCGGAGCCAATA 59.774 57.895 0.73 0.00 0.00 1.90
1017 1027 0.108207 CCATGGACCTCAGCCAGATC 59.892 60.000 5.56 0.00 39.11 2.75
1083 1093 3.781770 CTGGGTCGATCTCTGGCGC 62.782 68.421 0.00 0.00 0.00 6.53
1215 1225 2.028631 GCGAGGTATACCCGTGGC 59.971 66.667 24.45 15.31 38.74 5.01
1216 1226 2.333938 CGAGGTATACCCGTGGCG 59.666 66.667 18.65 10.64 38.74 5.69
1221 1231 0.176449 GGTATACCCGTGGCGTTTCT 59.824 55.000 11.17 0.00 0.00 2.52
1223 1233 1.662122 GTATACCCGTGGCGTTTCTTG 59.338 52.381 0.00 0.00 0.00 3.02
1234 1244 1.632422 CGTTTCTTGCATCAATGGCC 58.368 50.000 0.00 0.00 0.00 5.36
1248 1258 1.847798 ATGGCCGCCTCAGGTTTGTA 61.848 55.000 11.61 0.00 0.00 2.41
1267 1277 3.433274 TGTAGAGCTGCAATTTGAAGTCG 59.567 43.478 6.26 0.00 0.00 4.18
1346 1356 0.536724 TGGACGATCACCACATGGAG 59.463 55.000 4.53 0.00 38.94 3.86
1351 1361 1.332686 CGATCACCACATGGAGCAATG 59.667 52.381 4.53 0.00 38.94 2.82
1356 1366 0.033796 CCACATGGAGCAATGGAGGT 60.034 55.000 0.00 0.00 37.39 3.85
1365 1375 3.118261 GGAGCAATGGAGGTATGAGTGAA 60.118 47.826 0.00 0.00 0.00 3.18
1369 1379 4.702131 GCAATGGAGGTATGAGTGAACTTT 59.298 41.667 0.00 0.00 0.00 2.66
1419 1429 1.464687 CGAGCTTCCGAAATTGCTGTG 60.465 52.381 0.00 0.00 35.76 3.66
1455 1465 3.078891 TCTGAGCTCTCACTTCTGCTA 57.921 47.619 16.19 0.00 35.76 3.49
1457 1467 2.491298 CTGAGCTCTCACTTCTGCTACA 59.509 50.000 16.19 0.00 35.76 2.74
1509 1519 2.394563 GCGAGGCTTGCAGAACCTC 61.395 63.158 21.86 17.44 45.44 3.85
1626 1636 7.264221 AGTCATGGATTCTCGCTATTGATATC 58.736 38.462 0.00 0.00 0.00 1.63
1639 1649 5.049129 GCTATTGATATCAAGAACCACAGGC 60.049 44.000 21.97 12.10 39.47 4.85
1683 1693 3.711704 CTCCTCTACCTAAAGGATTGCCA 59.288 47.826 2.23 0.00 40.83 4.92
1689 1699 4.584638 ACCTAAAGGATTGCCATGTGTA 57.415 40.909 2.23 0.00 38.94 2.90
1728 1738 6.498304 CACTTGCATTATCTCCAAATGTACC 58.502 40.000 0.00 0.00 36.82 3.34
1750 1760 5.704053 ACCAATTAACACTACAGCAGGTAAC 59.296 40.000 0.00 0.00 0.00 2.50
1789 1799 1.202855 ACCAGCACACATCTGCTTCTT 60.203 47.619 0.00 0.00 45.64 2.52
1810 1820 7.686438 TCTTTGATGCTTACATTGCTTAAGA 57.314 32.000 6.67 0.00 36.35 2.10
1813 1823 8.560355 TTTGATGCTTACATTGCTTAAGAGTA 57.440 30.769 6.67 0.34 36.35 2.59
1815 1825 7.331026 TGATGCTTACATTGCTTAAGAGTACT 58.669 34.615 6.67 0.00 36.35 2.73
1846 1856 3.725740 CACTTAGTTTTTGCGTGCTTCAG 59.274 43.478 0.00 0.00 0.00 3.02
1859 1869 3.594134 GTGCTTCAGTCTGTGCTAAGAT 58.406 45.455 16.88 0.00 0.00 2.40
1860 1870 4.675408 CGTGCTTCAGTCTGTGCTAAGATA 60.675 45.833 16.88 0.00 0.00 1.98
1861 1871 4.564769 GTGCTTCAGTCTGTGCTAAGATAC 59.435 45.833 16.88 6.62 0.00 2.24
1886 1896 9.394767 ACTACATGCATAATAAACTGATCACAA 57.605 29.630 0.00 0.00 0.00 3.33
1967 1977 5.916661 AGTACATACCACTGTTCCTGTAG 57.083 43.478 0.00 0.00 0.00 2.74
1978 1988 7.125204 ACCACTGTTCCTGTAGCATATACTTAA 59.875 37.037 0.00 0.00 0.00 1.85
1980 1990 9.547753 CACTGTTCCTGTAGCATATACTTAATT 57.452 33.333 0.00 0.00 0.00 1.40
1986 1996 9.154632 TCCTGTAGCATATACTTAATTTCTCCA 57.845 33.333 0.00 0.00 0.00 3.86
1987 1997 9.429359 CCTGTAGCATATACTTAATTTCTCCAG 57.571 37.037 0.00 0.00 0.00 3.86
1988 1998 8.833231 TGTAGCATATACTTAATTTCTCCAGC 57.167 34.615 0.00 0.00 0.00 4.85
1989 1999 7.878127 TGTAGCATATACTTAATTTCTCCAGCC 59.122 37.037 0.00 0.00 0.00 4.85
1990 2000 6.241645 AGCATATACTTAATTTCTCCAGCCC 58.758 40.000 0.00 0.00 0.00 5.19
1991 2001 6.044871 AGCATATACTTAATTTCTCCAGCCCT 59.955 38.462 0.00 0.00 0.00 5.19
1992 2002 7.237679 AGCATATACTTAATTTCTCCAGCCCTA 59.762 37.037 0.00 0.00 0.00 3.53
1993 2003 7.334671 GCATATACTTAATTTCTCCAGCCCTAC 59.665 40.741 0.00 0.00 0.00 3.18
1994 2004 4.505324 ACTTAATTTCTCCAGCCCTACC 57.495 45.455 0.00 0.00 0.00 3.18
1995 2005 3.118371 ACTTAATTTCTCCAGCCCTACCG 60.118 47.826 0.00 0.00 0.00 4.02
1996 2006 1.286248 AATTTCTCCAGCCCTACCGT 58.714 50.000 0.00 0.00 0.00 4.83
1997 2007 1.286248 ATTTCTCCAGCCCTACCGTT 58.714 50.000 0.00 0.00 0.00 4.44
1998 2008 1.061546 TTTCTCCAGCCCTACCGTTT 58.938 50.000 0.00 0.00 0.00 3.60
1999 2009 1.061546 TTCTCCAGCCCTACCGTTTT 58.938 50.000 0.00 0.00 0.00 2.43
2000 2010 1.061546 TCTCCAGCCCTACCGTTTTT 58.938 50.000 0.00 0.00 0.00 1.94
2001 2011 1.165270 CTCCAGCCCTACCGTTTTTG 58.835 55.000 0.00 0.00 0.00 2.44
2002 2012 0.475044 TCCAGCCCTACCGTTTTTGT 59.525 50.000 0.00 0.00 0.00 2.83
2003 2013 1.133730 TCCAGCCCTACCGTTTTTGTT 60.134 47.619 0.00 0.00 0.00 2.83
2004 2014 1.000717 CCAGCCCTACCGTTTTTGTTG 60.001 52.381 0.00 0.00 0.00 3.33
2005 2015 1.950909 CAGCCCTACCGTTTTTGTTGA 59.049 47.619 0.00 0.00 0.00 3.18
2006 2016 2.359531 CAGCCCTACCGTTTTTGTTGAA 59.640 45.455 0.00 0.00 0.00 2.69
2007 2017 3.025262 AGCCCTACCGTTTTTGTTGAAA 58.975 40.909 0.00 0.00 0.00 2.69
2008 2018 3.447944 AGCCCTACCGTTTTTGTTGAAAA 59.552 39.130 0.00 0.00 34.93 2.29
2009 2019 4.100344 AGCCCTACCGTTTTTGTTGAAAAT 59.900 37.500 0.00 0.00 39.29 1.82
2010 2020 4.210328 GCCCTACCGTTTTTGTTGAAAATG 59.790 41.667 0.00 0.00 41.72 2.32
2011 2021 5.593010 CCCTACCGTTTTTGTTGAAAATGA 58.407 37.500 5.32 0.00 43.74 2.57
2012 2022 6.043411 CCCTACCGTTTTTGTTGAAAATGAA 58.957 36.000 5.32 0.00 43.74 2.57
2013 2023 6.200097 CCCTACCGTTTTTGTTGAAAATGAAG 59.800 38.462 5.32 3.34 43.74 3.02
2014 2024 6.754675 CCTACCGTTTTTGTTGAAAATGAAGT 59.245 34.615 5.32 0.10 43.74 3.01
2015 2025 7.916450 CCTACCGTTTTTGTTGAAAATGAAGTA 59.084 33.333 5.32 1.03 43.74 2.24
2016 2026 9.458374 CTACCGTTTTTGTTGAAAATGAAGTAT 57.542 29.630 5.32 0.00 43.74 2.12
2018 2028 9.974980 ACCGTTTTTGTTGAAAATGAAGTATAT 57.025 25.926 5.32 0.00 43.74 0.86
2037 2047 8.768957 AGTATATACTTCAATGTGCATAGCAG 57.231 34.615 9.71 0.00 33.80 4.24
2038 2048 8.370940 AGTATATACTTCAATGTGCATAGCAGT 58.629 33.333 9.71 0.00 33.80 4.40
2039 2049 9.639601 GTATATACTTCAATGTGCATAGCAGTA 57.360 33.333 5.58 0.00 40.08 2.74
2041 2051 5.746307 ACTTCAATGTGCATAGCAGTATG 57.254 39.130 0.00 0.00 40.08 2.39
2042 2052 5.188434 ACTTCAATGTGCATAGCAGTATGT 58.812 37.500 0.00 0.00 40.08 2.29
2043 2053 6.348498 ACTTCAATGTGCATAGCAGTATGTA 58.652 36.000 0.00 0.00 40.08 2.29
2044 2054 6.994496 ACTTCAATGTGCATAGCAGTATGTAT 59.006 34.615 0.00 0.00 40.08 2.29
2045 2055 8.150296 ACTTCAATGTGCATAGCAGTATGTATA 58.850 33.333 0.00 0.00 40.08 1.47
2046 2056 9.159364 CTTCAATGTGCATAGCAGTATGTATAT 57.841 33.333 0.00 0.00 40.08 0.86
2048 2058 9.586435 TCAATGTGCATAGCAGTATGTATATAC 57.414 33.333 5.89 5.89 40.08 1.47
2049 2059 9.369904 CAATGTGCATAGCAGTATGTATATACA 57.630 33.333 17.65 17.65 40.08 2.29
2050 2060 8.932945 ATGTGCATAGCAGTATGTATATACAC 57.067 34.615 17.69 6.55 40.08 2.90
2051 2061 8.122472 TGTGCATAGCAGTATGTATATACACT 57.878 34.615 17.69 11.98 40.08 3.55
2052 2062 8.585018 TGTGCATAGCAGTATGTATATACACTT 58.415 33.333 17.69 6.00 40.08 3.16
2053 2063 9.424319 GTGCATAGCAGTATGTATATACACTTT 57.576 33.333 17.69 5.29 40.08 2.66
2054 2064 9.996554 TGCATAGCAGTATGTATATACACTTTT 57.003 29.630 17.69 4.93 41.33 2.27
2081 2091 8.925161 TTTAATCTTGCAAAAGTGGTATATGC 57.075 30.769 0.00 0.00 37.52 3.14
2082 2092 6.780457 AATCTTGCAAAAGTGGTATATGCT 57.220 33.333 0.00 0.00 37.86 3.79
2083 2093 6.780457 ATCTTGCAAAAGTGGTATATGCTT 57.220 33.333 0.00 0.00 37.86 3.91
2084 2094 6.194796 TCTTGCAAAAGTGGTATATGCTTC 57.805 37.500 0.00 0.00 37.86 3.86
2085 2095 5.709631 TCTTGCAAAAGTGGTATATGCTTCA 59.290 36.000 0.00 0.00 37.86 3.02
2086 2096 6.377996 TCTTGCAAAAGTGGTATATGCTTCAT 59.622 34.615 0.00 0.00 37.86 2.57
2087 2097 5.893687 TGCAAAAGTGGTATATGCTTCATG 58.106 37.500 0.00 0.00 37.86 3.07
2088 2098 5.651576 TGCAAAAGTGGTATATGCTTCATGA 59.348 36.000 0.00 0.00 37.86 3.07
2089 2099 6.183360 TGCAAAAGTGGTATATGCTTCATGAG 60.183 38.462 0.00 0.00 37.86 2.90
2109 2119 9.520515 TCATGAGCACAATAGTATATCACTAGA 57.479 33.333 0.00 0.00 43.01 2.43
2114 2124 9.920133 AGCACAATAGTATATCACTAGAATGTG 57.080 33.333 15.91 15.91 44.97 3.21
2115 2125 9.698309 GCACAATAGTATATCACTAGAATGTGT 57.302 33.333 18.61 6.05 44.56 3.72
2126 2136 8.798859 ATCACTAGAATGTGTATGCTTCTTTT 57.201 30.769 0.00 0.00 38.90 2.27
2127 2137 8.621532 TCACTAGAATGTGTATGCTTCTTTTT 57.378 30.769 0.00 0.00 38.90 1.94
2128 2138 9.719355 TCACTAGAATGTGTATGCTTCTTTTTA 57.281 29.630 0.00 0.00 38.90 1.52
2129 2139 9.979270 CACTAGAATGTGTATGCTTCTTTTTAG 57.021 33.333 0.00 0.00 33.61 1.85
2130 2140 9.944376 ACTAGAATGTGTATGCTTCTTTTTAGA 57.056 29.630 0.00 0.00 31.89 2.10
2132 2142 7.743104 AGAATGTGTATGCTTCTTTTTAGACG 58.257 34.615 0.00 0.00 0.00 4.18
2133 2143 7.387948 AGAATGTGTATGCTTCTTTTTAGACGT 59.612 33.333 0.00 0.00 0.00 4.34
2134 2144 8.542497 AATGTGTATGCTTCTTTTTAGACGTA 57.458 30.769 0.00 0.00 0.00 3.57
2135 2145 8.718102 ATGTGTATGCTTCTTTTTAGACGTAT 57.282 30.769 0.00 0.00 0.00 3.06
2136 2146 9.811995 ATGTGTATGCTTCTTTTTAGACGTATA 57.188 29.630 0.00 0.00 0.00 1.47
2137 2147 9.811995 TGTGTATGCTTCTTTTTAGACGTATAT 57.188 29.630 0.00 0.00 0.00 0.86
2142 2152 9.826574 ATGCTTCTTTTTAGACGTATATACCAA 57.173 29.630 7.30 0.00 0.00 3.67
2143 2153 9.826574 TGCTTCTTTTTAGACGTATATACCAAT 57.173 29.630 7.30 0.00 0.00 3.16
2186 2196 8.422566 ACTCCCACTGTAAACTAATATAAGAGC 58.577 37.037 0.00 0.00 0.00 4.09
2187 2197 7.431249 TCCCACTGTAAACTAATATAAGAGCG 58.569 38.462 0.00 0.00 0.00 5.03
2188 2198 7.069085 TCCCACTGTAAACTAATATAAGAGCGT 59.931 37.037 0.00 0.00 0.00 5.07
2189 2199 7.709613 CCCACTGTAAACTAATATAAGAGCGTT 59.290 37.037 0.00 0.00 0.00 4.84
2190 2200 9.095065 CCACTGTAAACTAATATAAGAGCGTTT 57.905 33.333 0.00 0.00 0.00 3.60
2226 2236 9.686683 AAATAGTGATCTAAACAACCATTAGCT 57.313 29.630 0.00 0.00 31.77 3.32
2227 2237 8.894768 ATAGTGATCTAAACAACCATTAGCTC 57.105 34.615 0.00 0.00 31.77 4.09
2228 2238 6.711277 AGTGATCTAAACAACCATTAGCTCA 58.289 36.000 0.00 0.00 34.74 4.26
2229 2239 7.341805 AGTGATCTAAACAACCATTAGCTCAT 58.658 34.615 0.00 0.00 37.64 2.90
2230 2240 8.486210 AGTGATCTAAACAACCATTAGCTCATA 58.514 33.333 0.00 0.00 37.64 2.15
2231 2241 8.552034 GTGATCTAAACAACCATTAGCTCATAC 58.448 37.037 0.00 0.00 37.64 2.39
2232 2242 8.264347 TGATCTAAACAACCATTAGCTCATACA 58.736 33.333 0.00 0.00 33.15 2.29
2233 2243 9.277783 GATCTAAACAACCATTAGCTCATACAT 57.722 33.333 0.00 0.00 29.95 2.29
2234 2244 9.632638 ATCTAAACAACCATTAGCTCATACATT 57.367 29.630 0.00 0.00 31.77 2.71
2235 2245 9.461312 TCTAAACAACCATTAGCTCATACATTT 57.539 29.630 0.00 0.00 31.77 2.32
2256 2266 5.746990 TTTTTGTGGGTTTTCTTGAAGGA 57.253 34.783 0.00 0.00 0.00 3.36
2257 2267 5.746990 TTTTGTGGGTTTTCTTGAAGGAA 57.253 34.783 0.00 0.00 0.00 3.36
2258 2268 5.746990 TTTGTGGGTTTTCTTGAAGGAAA 57.253 34.783 0.00 0.00 33.98 3.13
2259 2269 5.746990 TTGTGGGTTTTCTTGAAGGAAAA 57.253 34.783 0.00 0.02 41.17 2.29
2260 2270 5.746990 TGTGGGTTTTCTTGAAGGAAAAA 57.253 34.783 0.00 0.00 43.72 1.94
2282 2292 6.887376 AAAGTATACACTACAATGTGCTCG 57.113 37.500 5.50 0.00 41.30 5.03
2283 2293 4.933330 AGTATACACTACAATGTGCTCGG 58.067 43.478 5.50 0.00 41.30 4.63
2284 2294 3.887621 ATACACTACAATGTGCTCGGT 57.112 42.857 0.00 0.00 41.30 4.69
2285 2295 4.994907 ATACACTACAATGTGCTCGGTA 57.005 40.909 0.00 0.00 41.30 4.02
2286 2296 3.232213 ACACTACAATGTGCTCGGTAG 57.768 47.619 0.00 9.25 41.30 3.18
2287 2297 2.561419 ACACTACAATGTGCTCGGTAGT 59.439 45.455 0.00 10.20 45.26 2.73
2288 2298 3.760151 ACACTACAATGTGCTCGGTAGTA 59.240 43.478 13.69 0.88 43.22 1.82
2289 2299 4.401519 ACACTACAATGTGCTCGGTAGTAT 59.598 41.667 13.69 4.60 43.22 2.12
2290 2300 5.591472 ACACTACAATGTGCTCGGTAGTATA 59.409 40.000 13.69 0.00 43.22 1.47
2291 2301 6.264744 ACACTACAATGTGCTCGGTAGTATAT 59.735 38.462 13.69 4.79 43.22 0.86
2292 2302 7.446319 ACACTACAATGTGCTCGGTAGTATATA 59.554 37.037 13.69 0.00 43.22 0.86
2293 2303 7.749570 CACTACAATGTGCTCGGTAGTATATAC 59.250 40.741 4.60 4.60 43.22 1.47
2294 2304 6.896021 ACAATGTGCTCGGTAGTATATACT 57.104 37.500 19.07 19.07 40.24 2.12
2295 2305 7.991084 ACAATGTGCTCGGTAGTATATACTA 57.009 36.000 17.03 17.03 37.73 1.82
2296 2306 8.041829 ACAATGTGCTCGGTAGTATATACTAG 57.958 38.462 20.62 13.00 39.29 2.57
2297 2307 7.881751 ACAATGTGCTCGGTAGTATATACTAGA 59.118 37.037 20.62 14.71 39.29 2.43
2298 2308 8.727910 CAATGTGCTCGGTAGTATATACTAGAA 58.272 37.037 20.62 5.09 39.29 2.10
2299 2309 7.902387 TGTGCTCGGTAGTATATACTAGAAG 57.098 40.000 20.62 17.58 39.29 2.85
2300 2310 6.877855 TGTGCTCGGTAGTATATACTAGAAGG 59.122 42.308 20.62 13.11 39.29 3.46
2301 2311 5.879223 TGCTCGGTAGTATATACTAGAAGGC 59.121 44.000 20.62 20.12 39.29 4.35
2302 2312 6.114767 GCTCGGTAGTATATACTAGAAGGCT 58.885 44.000 20.62 0.00 39.29 4.58
2303 2313 6.598850 GCTCGGTAGTATATACTAGAAGGCTT 59.401 42.308 20.62 0.00 39.29 4.35
2304 2314 7.414319 GCTCGGTAGTATATACTAGAAGGCTTG 60.414 44.444 20.62 8.72 39.29 4.01
2305 2315 7.683578 TCGGTAGTATATACTAGAAGGCTTGA 58.316 38.462 20.62 9.57 39.29 3.02
2306 2316 7.823310 TCGGTAGTATATACTAGAAGGCTTGAG 59.177 40.741 20.62 4.17 39.29 3.02
2307 2317 7.414319 CGGTAGTATATACTAGAAGGCTTGAGC 60.414 44.444 20.62 8.10 39.29 4.26
2308 2318 6.503589 AGTATATACTAGAAGGCTTGAGCG 57.496 41.667 13.88 0.00 36.98 5.03
2309 2319 2.517650 ATACTAGAAGGCTTGAGCGC 57.482 50.000 3.46 0.00 43.26 5.92
2310 2320 0.100682 TACTAGAAGGCTTGAGCGCG 59.899 55.000 3.46 0.00 43.26 6.86
2311 2321 2.509336 TAGAAGGCTTGAGCGCGC 60.509 61.111 26.66 26.66 43.26 6.86
2312 2322 2.897641 CTAGAAGGCTTGAGCGCGCT 62.898 60.000 37.28 37.28 43.26 5.92
2313 2323 2.507110 TAGAAGGCTTGAGCGCGCTT 62.507 55.000 36.87 18.13 43.26 4.68
2314 2324 2.970974 GAAGGCTTGAGCGCGCTTT 61.971 57.895 36.87 24.21 43.26 3.51
2315 2325 3.259425 AAGGCTTGAGCGCGCTTTG 62.259 57.895 36.87 26.58 43.26 2.77
2318 2328 4.029186 CTTGAGCGCGCTTTGCCA 62.029 61.111 36.87 25.31 42.08 4.92
2319 2329 4.326766 TTGAGCGCGCTTTGCCAC 62.327 61.111 36.87 21.55 42.08 5.01
2326 2336 2.806198 CGCTTTGCCACGCCATTG 60.806 61.111 0.00 0.00 0.00 2.82
2327 2337 2.432972 GCTTTGCCACGCCATTGG 60.433 61.111 0.00 0.00 39.98 3.16
2328 2338 3.050339 CTTTGCCACGCCATTGGT 58.950 55.556 4.26 0.00 39.09 3.67
2329 2339 1.373246 CTTTGCCACGCCATTGGTG 60.373 57.895 14.72 14.72 39.09 4.17
2331 2341 1.680522 TTTGCCACGCCATTGGTGTT 61.681 50.000 19.16 2.54 44.78 3.32
2332 2342 2.049248 GCCACGCCATTGGTGTTG 60.049 61.111 19.16 16.61 44.78 3.33
2333 2343 2.855514 GCCACGCCATTGGTGTTGT 61.856 57.895 19.16 2.92 44.78 3.32
2334 2344 1.739049 CCACGCCATTGGTGTTGTT 59.261 52.632 19.16 0.00 44.78 2.83
2335 2345 0.597118 CCACGCCATTGGTGTTGTTG 60.597 55.000 19.16 8.23 44.78 3.33
2336 2346 0.383590 CACGCCATTGGTGTTGTTGA 59.616 50.000 19.16 0.00 44.78 3.18
2337 2347 0.667993 ACGCCATTGGTGTTGTTGAG 59.332 50.000 16.17 0.00 44.78 3.02
2338 2348 0.950836 CGCCATTGGTGTTGTTGAGA 59.049 50.000 8.14 0.00 0.00 3.27
2339 2349 1.541147 CGCCATTGGTGTTGTTGAGAT 59.459 47.619 8.14 0.00 0.00 2.75
2340 2350 2.030007 CGCCATTGGTGTTGTTGAGATT 60.030 45.455 8.14 0.00 0.00 2.40
2341 2351 3.578688 GCCATTGGTGTTGTTGAGATTC 58.421 45.455 4.26 0.00 0.00 2.52
2342 2352 3.256631 GCCATTGGTGTTGTTGAGATTCT 59.743 43.478 4.26 0.00 0.00 2.40
2343 2353 4.262164 GCCATTGGTGTTGTTGAGATTCTT 60.262 41.667 4.26 0.00 0.00 2.52
2344 2354 5.048083 GCCATTGGTGTTGTTGAGATTCTTA 60.048 40.000 4.26 0.00 0.00 2.10
2345 2355 6.516527 GCCATTGGTGTTGTTGAGATTCTTAA 60.517 38.462 4.26 0.00 0.00 1.85
2346 2356 7.432869 CCATTGGTGTTGTTGAGATTCTTAAA 58.567 34.615 0.00 0.00 0.00 1.52
2347 2357 7.925483 CCATTGGTGTTGTTGAGATTCTTAAAA 59.075 33.333 0.00 0.00 0.00 1.52
2348 2358 9.311916 CATTGGTGTTGTTGAGATTCTTAAAAA 57.688 29.630 0.00 0.00 0.00 1.94
2406 2416 9.898152 AAAAATCCAACCTTTTAAGTTTGATCA 57.102 25.926 0.00 0.00 30.89 2.92
2407 2417 9.898152 AAAATCCAACCTTTTAAGTTTGATCAA 57.102 25.926 3.38 3.38 30.89 2.57
2408 2418 9.898152 AAATCCAACCTTTTAAGTTTGATCAAA 57.102 25.926 16.91 16.91 30.89 2.69
2506 2516 8.909708 TTTTTGGCTTAATATTGAGAATGTCG 57.090 30.769 11.23 0.00 0.00 4.35
2507 2517 7.857734 TTTGGCTTAATATTGAGAATGTCGA 57.142 32.000 11.23 0.00 0.00 4.20
2508 2518 8.450578 TTTGGCTTAATATTGAGAATGTCGAT 57.549 30.769 11.23 0.00 33.40 3.59
2509 2519 9.554395 TTTGGCTTAATATTGAGAATGTCGATA 57.446 29.630 11.23 0.00 36.18 2.92
2510 2520 9.725019 TTGGCTTAATATTGAGAATGTCGATAT 57.275 29.630 11.23 0.00 42.19 1.63
2517 2527 9.683069 AATATTGAGAATGTCGATATTTTTGGC 57.317 29.630 8.90 0.00 44.91 4.52
2518 2528 6.757897 TTGAGAATGTCGATATTTTTGGCT 57.242 33.333 8.90 1.09 0.00 4.75
2519 2529 6.363577 TGAGAATGTCGATATTTTTGGCTC 57.636 37.500 8.90 10.36 0.00 4.70
2520 2530 6.115446 TGAGAATGTCGATATTTTTGGCTCT 58.885 36.000 8.90 0.00 0.00 4.09
2521 2531 7.272244 TGAGAATGTCGATATTTTTGGCTCTA 58.728 34.615 8.90 0.52 0.00 2.43
2522 2532 7.768582 TGAGAATGTCGATATTTTTGGCTCTAA 59.231 33.333 8.90 0.00 0.00 2.10
2523 2533 8.506168 AGAATGTCGATATTTTTGGCTCTAAA 57.494 30.769 8.90 0.00 0.00 1.85
2524 2534 8.398665 AGAATGTCGATATTTTTGGCTCTAAAC 58.601 33.333 8.90 0.00 0.00 2.01
2525 2535 7.865706 ATGTCGATATTTTTGGCTCTAAACT 57.134 32.000 0.00 0.00 0.00 2.66
2526 2536 7.681939 TGTCGATATTTTTGGCTCTAAACTT 57.318 32.000 0.00 0.00 0.00 2.66
2527 2537 7.526608 TGTCGATATTTTTGGCTCTAAACTTG 58.473 34.615 0.00 0.00 0.00 3.16
2528 2538 6.967199 GTCGATATTTTTGGCTCTAAACTTGG 59.033 38.462 0.00 0.00 0.00 3.61
2529 2539 6.657541 TCGATATTTTTGGCTCTAAACTTGGT 59.342 34.615 0.00 0.00 0.00 3.67
2530 2540 6.967199 CGATATTTTTGGCTCTAAACTTGGTC 59.033 38.462 0.00 0.00 0.00 4.02
2531 2541 7.361713 CGATATTTTTGGCTCTAAACTTGGTCA 60.362 37.037 0.00 0.00 0.00 4.02
2532 2542 5.923733 TTTTTGGCTCTAAACTTGGTCAA 57.076 34.783 0.00 0.00 0.00 3.18
2533 2543 5.923733 TTTTGGCTCTAAACTTGGTCAAA 57.076 34.783 0.00 0.00 0.00 2.69
2534 2544 5.514274 TTTGGCTCTAAACTTGGTCAAAG 57.486 39.130 0.00 0.00 42.07 2.77
2549 2559 8.788409 CTTGGTCAAAGTTAAAGAAATCTGAC 57.212 34.615 0.00 0.00 32.94 3.51
2550 2560 8.519799 TTGGTCAAAGTTAAAGAAATCTGACT 57.480 30.769 0.00 0.00 33.94 3.41
2551 2561 8.519799 TGGTCAAAGTTAAAGAAATCTGACTT 57.480 30.769 0.00 2.91 33.94 3.01
2552 2562 8.966868 TGGTCAAAGTTAAAGAAATCTGACTTT 58.033 29.630 11.14 11.14 39.27 2.66
2553 2563 9.452065 GGTCAAAGTTAAAGAAATCTGACTTTC 57.548 33.333 12.85 1.24 37.49 2.62
2554 2564 9.452065 GTCAAAGTTAAAGAAATCTGACTTTCC 57.548 33.333 12.85 7.01 37.49 3.13
2555 2565 9.184523 TCAAAGTTAAAGAAATCTGACTTTCCA 57.815 29.630 12.85 5.15 37.49 3.53
2556 2566 9.801873 CAAAGTTAAAGAAATCTGACTTTCCAA 57.198 29.630 12.85 0.00 37.49 3.53
2581 2591 7.727578 AAAACCACTACCCCTTATATTTTGG 57.272 36.000 0.00 0.00 0.00 3.28
2582 2592 5.397553 ACCACTACCCCTTATATTTTGGG 57.602 43.478 0.00 0.00 44.03 4.12
2583 2593 5.047906 ACCACTACCCCTTATATTTTGGGA 58.952 41.667 9.44 0.00 43.47 4.37
2584 2594 5.103813 ACCACTACCCCTTATATTTTGGGAC 60.104 44.000 9.44 0.00 43.47 4.46
2585 2595 5.133830 CCACTACCCCTTATATTTTGGGACT 59.866 44.000 9.44 0.00 43.47 3.85
2586 2596 6.062095 CACTACCCCTTATATTTTGGGACTG 58.938 44.000 9.44 3.22 43.47 3.51
2587 2597 4.536295 ACCCCTTATATTTTGGGACTGG 57.464 45.455 9.44 0.00 43.47 4.00
2588 2598 3.862309 ACCCCTTATATTTTGGGACTGGT 59.138 43.478 9.44 0.00 43.47 4.00
2589 2599 4.215109 CCCCTTATATTTTGGGACTGGTG 58.785 47.826 8.43 0.00 43.47 4.17
2590 2600 4.215109 CCCTTATATTTTGGGACTGGTGG 58.785 47.826 0.00 0.00 43.47 4.61
2591 2601 4.079443 CCCTTATATTTTGGGACTGGTGGA 60.079 45.833 0.00 0.00 43.47 4.02
2592 2602 5.515106 CCTTATATTTTGGGACTGGTGGAA 58.485 41.667 0.00 0.00 0.00 3.53
2593 2603 6.136155 CCTTATATTTTGGGACTGGTGGAAT 58.864 40.000 0.00 0.00 0.00 3.01
2594 2604 7.294584 CCTTATATTTTGGGACTGGTGGAATA 58.705 38.462 0.00 0.00 0.00 1.75
2595 2605 7.950124 CCTTATATTTTGGGACTGGTGGAATAT 59.050 37.037 0.00 0.00 0.00 1.28
2596 2606 9.367160 CTTATATTTTGGGACTGGTGGAATATT 57.633 33.333 0.00 0.00 0.00 1.28
2597 2607 9.722317 TTATATTTTGGGACTGGTGGAATATTT 57.278 29.630 0.00 0.00 0.00 1.40
2599 2609 7.660030 ATTTTGGGACTGGTGGAATATTTAG 57.340 36.000 0.00 0.00 0.00 1.85
2600 2610 5.789574 TTGGGACTGGTGGAATATTTAGT 57.210 39.130 0.00 0.00 0.00 2.24
2601 2611 5.789574 TGGGACTGGTGGAATATTTAGTT 57.210 39.130 0.00 0.00 0.00 2.24
2602 2612 6.147437 TGGGACTGGTGGAATATTTAGTTT 57.853 37.500 0.00 0.00 0.00 2.66
2603 2613 5.949354 TGGGACTGGTGGAATATTTAGTTTG 59.051 40.000 0.00 0.00 0.00 2.93
2604 2614 5.359860 GGGACTGGTGGAATATTTAGTTTGG 59.640 44.000 0.00 0.00 0.00 3.28
2605 2615 5.163550 GGACTGGTGGAATATTTAGTTTGGC 60.164 44.000 0.00 0.00 0.00 4.52
2606 2616 4.398044 ACTGGTGGAATATTTAGTTTGGCG 59.602 41.667 0.00 0.00 0.00 5.69
2607 2617 3.697045 TGGTGGAATATTTAGTTTGGCGG 59.303 43.478 0.00 0.00 0.00 6.13
2608 2618 3.949113 GGTGGAATATTTAGTTTGGCGGA 59.051 43.478 0.00 0.00 0.00 5.54
2609 2619 4.583073 GGTGGAATATTTAGTTTGGCGGAT 59.417 41.667 0.00 0.00 0.00 4.18
2610 2620 5.507315 GGTGGAATATTTAGTTTGGCGGATG 60.507 44.000 0.00 0.00 0.00 3.51
2611 2621 4.582656 TGGAATATTTAGTTTGGCGGATGG 59.417 41.667 0.00 0.00 0.00 3.51
2612 2622 4.022329 GGAATATTTAGTTTGGCGGATGGG 60.022 45.833 0.00 0.00 0.00 4.00
2613 2623 1.775385 ATTTAGTTTGGCGGATGGGG 58.225 50.000 0.00 0.00 0.00 4.96
2614 2624 0.323908 TTTAGTTTGGCGGATGGGGG 60.324 55.000 0.00 0.00 0.00 5.40
2615 2625 1.208844 TTAGTTTGGCGGATGGGGGA 61.209 55.000 0.00 0.00 0.00 4.81
2616 2626 1.632018 TAGTTTGGCGGATGGGGGAG 61.632 60.000 0.00 0.00 0.00 4.30
2617 2627 2.612430 TTTGGCGGATGGGGGAGA 60.612 61.111 0.00 0.00 0.00 3.71
2618 2628 2.978946 TTTGGCGGATGGGGGAGAC 61.979 63.158 0.00 0.00 0.00 3.36
2621 2631 3.234730 GCGGATGGGGGAGACGAT 61.235 66.667 0.00 0.00 0.00 3.73
2622 2632 2.737180 CGGATGGGGGAGACGATG 59.263 66.667 0.00 0.00 0.00 3.84
2623 2633 2.872388 CGGATGGGGGAGACGATGG 61.872 68.421 0.00 0.00 0.00 3.51
2624 2634 1.459539 GGATGGGGGAGACGATGGA 60.460 63.158 0.00 0.00 0.00 3.41
2625 2635 1.476007 GGATGGGGGAGACGATGGAG 61.476 65.000 0.00 0.00 0.00 3.86
2626 2636 0.760945 GATGGGGGAGACGATGGAGT 60.761 60.000 0.00 0.00 0.00 3.85
2627 2637 1.050988 ATGGGGGAGACGATGGAGTG 61.051 60.000 0.00 0.00 0.00 3.51
2628 2638 1.686110 GGGGGAGACGATGGAGTGT 60.686 63.158 0.00 0.00 0.00 3.55
2629 2639 1.517832 GGGGAGACGATGGAGTGTG 59.482 63.158 0.00 0.00 0.00 3.82
2630 2640 1.258445 GGGGAGACGATGGAGTGTGT 61.258 60.000 0.00 0.00 0.00 3.72
2631 2641 0.608640 GGGAGACGATGGAGTGTGTT 59.391 55.000 0.00 0.00 0.00 3.32
2632 2642 1.002087 GGGAGACGATGGAGTGTGTTT 59.998 52.381 0.00 0.00 0.00 2.83
2633 2643 2.550208 GGGAGACGATGGAGTGTGTTTT 60.550 50.000 0.00 0.00 0.00 2.43
2634 2644 3.306502 GGGAGACGATGGAGTGTGTTTTA 60.307 47.826 0.00 0.00 0.00 1.52
2635 2645 4.504858 GGAGACGATGGAGTGTGTTTTAT 58.495 43.478 0.00 0.00 0.00 1.40
2636 2646 4.330074 GGAGACGATGGAGTGTGTTTTATG 59.670 45.833 0.00 0.00 0.00 1.90
2637 2647 4.894784 AGACGATGGAGTGTGTTTTATGT 58.105 39.130 0.00 0.00 0.00 2.29
2638 2648 5.305585 AGACGATGGAGTGTGTTTTATGTT 58.694 37.500 0.00 0.00 0.00 2.71
2639 2649 5.763204 AGACGATGGAGTGTGTTTTATGTTT 59.237 36.000 0.00 0.00 0.00 2.83
2640 2650 6.932400 AGACGATGGAGTGTGTTTTATGTTTA 59.068 34.615 0.00 0.00 0.00 2.01
2641 2651 7.606456 AGACGATGGAGTGTGTTTTATGTTTAT 59.394 33.333 0.00 0.00 0.00 1.40
2642 2652 8.106247 ACGATGGAGTGTGTTTTATGTTTATT 57.894 30.769 0.00 0.00 0.00 1.40
2643 2653 8.573035 ACGATGGAGTGTGTTTTATGTTTATTT 58.427 29.630 0.00 0.00 0.00 1.40
2666 2676 8.499403 TTTATAATTTGGTTATTTGGCAAGCC 57.501 30.769 3.61 3.61 34.82 4.35
2667 2677 4.639078 AATTTGGTTATTTGGCAAGCCT 57.361 36.364 12.96 0.00 36.94 4.58
2668 2678 4.639078 ATTTGGTTATTTGGCAAGCCTT 57.361 36.364 12.96 0.10 36.94 4.35
2669 2679 4.429854 TTTGGTTATTTGGCAAGCCTTT 57.570 36.364 12.96 0.00 36.94 3.11
2670 2680 3.676291 TGGTTATTTGGCAAGCCTTTC 57.324 42.857 12.96 0.00 36.94 2.62
2671 2681 2.968574 TGGTTATTTGGCAAGCCTTTCA 59.031 40.909 12.96 0.00 36.94 2.69
2672 2682 3.582208 TGGTTATTTGGCAAGCCTTTCAT 59.418 39.130 12.96 1.94 36.94 2.57
2673 2683 3.934579 GGTTATTTGGCAAGCCTTTCATG 59.065 43.478 12.96 0.00 36.94 3.07
2674 2684 2.773993 ATTTGGCAAGCCTTTCATGG 57.226 45.000 12.96 0.00 36.94 3.66
2675 2685 1.422531 TTTGGCAAGCCTTTCATGGT 58.577 45.000 12.96 0.00 36.94 3.55
2676 2686 0.680618 TTGGCAAGCCTTTCATGGTG 59.319 50.000 12.96 0.00 36.94 4.17
2677 2687 0.469705 TGGCAAGCCTTTCATGGTGT 60.470 50.000 12.96 0.00 36.94 4.16
2678 2688 0.037975 GGCAAGCCTTTCATGGTGTG 60.038 55.000 3.29 0.00 0.00 3.82
2679 2689 0.961019 GCAAGCCTTTCATGGTGTGA 59.039 50.000 0.00 0.00 34.25 3.58
2680 2690 1.547372 GCAAGCCTTTCATGGTGTGAT 59.453 47.619 0.00 0.00 36.54 3.06
2681 2691 2.028748 GCAAGCCTTTCATGGTGTGATT 60.029 45.455 0.00 0.00 36.54 2.57
2682 2692 3.841643 CAAGCCTTTCATGGTGTGATTC 58.158 45.455 0.00 0.00 36.54 2.52
2683 2693 3.446442 AGCCTTTCATGGTGTGATTCT 57.554 42.857 0.00 0.00 36.54 2.40
2684 2694 3.087031 AGCCTTTCATGGTGTGATTCTG 58.913 45.455 0.00 0.00 36.54 3.02
2685 2695 2.821969 GCCTTTCATGGTGTGATTCTGT 59.178 45.455 0.00 0.00 36.54 3.41
2686 2696 4.009675 GCCTTTCATGGTGTGATTCTGTA 58.990 43.478 0.00 0.00 36.54 2.74
2687 2697 4.641989 GCCTTTCATGGTGTGATTCTGTAT 59.358 41.667 0.00 0.00 36.54 2.29
2688 2698 5.126061 GCCTTTCATGGTGTGATTCTGTATT 59.874 40.000 0.00 0.00 36.54 1.89
2689 2699 6.318648 GCCTTTCATGGTGTGATTCTGTATTA 59.681 38.462 0.00 0.00 36.54 0.98
2690 2700 7.013655 GCCTTTCATGGTGTGATTCTGTATTAT 59.986 37.037 0.00 0.00 36.54 1.28
2691 2701 8.347771 CCTTTCATGGTGTGATTCTGTATTATG 58.652 37.037 0.00 0.00 36.54 1.90
2692 2702 6.866010 TCATGGTGTGATTCTGTATTATGC 57.134 37.500 0.00 0.00 0.00 3.14
2693 2703 5.466393 TCATGGTGTGATTCTGTATTATGCG 59.534 40.000 0.00 0.00 0.00 4.73
2694 2704 3.559655 TGGTGTGATTCTGTATTATGCGC 59.440 43.478 0.00 0.00 0.00 6.09
2695 2705 3.809832 GGTGTGATTCTGTATTATGCGCT 59.190 43.478 9.73 0.00 0.00 5.92
2696 2706 4.988540 GGTGTGATTCTGTATTATGCGCTA 59.011 41.667 9.73 0.00 0.00 4.26
2697 2707 5.465390 GGTGTGATTCTGTATTATGCGCTAA 59.535 40.000 9.73 5.32 0.00 3.09
2698 2708 6.147821 GGTGTGATTCTGTATTATGCGCTAAT 59.852 38.462 9.73 12.50 34.39 1.73
2699 2709 7.230222 GTGTGATTCTGTATTATGCGCTAATC 58.770 38.462 9.73 4.82 32.26 1.75
2700 2710 6.928492 TGTGATTCTGTATTATGCGCTAATCA 59.072 34.615 9.73 7.18 32.26 2.57
2701 2711 7.440856 TGTGATTCTGTATTATGCGCTAATCAA 59.559 33.333 9.73 2.27 34.81 2.57
2702 2712 7.742089 GTGATTCTGTATTATGCGCTAATCAAC 59.258 37.037 9.73 7.15 34.81 3.18
2703 2713 7.657354 TGATTCTGTATTATGCGCTAATCAACT 59.343 33.333 9.73 0.00 31.23 3.16
2704 2714 7.408132 TTCTGTATTATGCGCTAATCAACTC 57.592 36.000 9.73 1.82 32.26 3.01
2705 2715 6.512297 TCTGTATTATGCGCTAATCAACTCA 58.488 36.000 9.73 5.49 32.26 3.41
2706 2716 7.154656 TCTGTATTATGCGCTAATCAACTCAT 58.845 34.615 9.73 0.00 32.26 2.90
2707 2717 7.329471 TCTGTATTATGCGCTAATCAACTCATC 59.671 37.037 9.73 0.00 32.26 2.92
2708 2718 7.154656 TGTATTATGCGCTAATCAACTCATCT 58.845 34.615 9.73 0.00 32.26 2.90
2709 2719 7.657354 TGTATTATGCGCTAATCAACTCATCTT 59.343 33.333 9.73 0.00 32.26 2.40
2710 2720 6.925610 TTATGCGCTAATCAACTCATCTTT 57.074 33.333 9.73 0.00 0.00 2.52
2711 2721 5.824904 ATGCGCTAATCAACTCATCTTTT 57.175 34.783 9.73 0.00 0.00 2.27
2712 2722 4.973396 TGCGCTAATCAACTCATCTTTTG 58.027 39.130 9.73 0.00 0.00 2.44
2713 2723 4.455533 TGCGCTAATCAACTCATCTTTTGT 59.544 37.500 9.73 0.00 0.00 2.83
2714 2724 5.048782 TGCGCTAATCAACTCATCTTTTGTT 60.049 36.000 9.73 0.00 0.00 2.83
2715 2725 5.284660 GCGCTAATCAACTCATCTTTTGTTG 59.715 40.000 0.00 0.00 41.46 3.33
2716 2726 5.796935 CGCTAATCAACTCATCTTTTGTTGG 59.203 40.000 0.00 0.00 40.75 3.77
2717 2727 6.568462 CGCTAATCAACTCATCTTTTGTTGGT 60.568 38.462 0.00 0.00 40.75 3.67
2718 2728 7.360861 CGCTAATCAACTCATCTTTTGTTGGTA 60.361 37.037 0.00 0.00 40.75 3.25
2719 2729 8.296713 GCTAATCAACTCATCTTTTGTTGGTAA 58.703 33.333 0.00 0.00 40.75 2.85
2722 2732 7.639113 TCAACTCATCTTTTGTTGGTAAAGT 57.361 32.000 0.00 0.00 40.75 2.66
2723 2733 8.740123 TCAACTCATCTTTTGTTGGTAAAGTA 57.260 30.769 0.00 0.00 40.75 2.24
2724 2734 9.179909 TCAACTCATCTTTTGTTGGTAAAGTAA 57.820 29.630 0.00 0.00 40.75 2.24
2725 2735 9.796120 CAACTCATCTTTTGTTGGTAAAGTAAA 57.204 29.630 0.00 0.00 37.85 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
260 261 2.057137 AGGTGAAGCTCTTTGCACAA 57.943 45.000 0.00 0.00 45.94 3.33
261 262 2.057137 AAGGTGAAGCTCTTTGCACA 57.943 45.000 0.00 0.00 45.94 4.57
262 263 2.603173 CGAAAGGTGAAGCTCTTTGCAC 60.603 50.000 3.07 0.03 45.94 4.57
263 264 1.603802 CGAAAGGTGAAGCTCTTTGCA 59.396 47.619 3.07 0.00 45.94 4.08
264 265 1.604278 ACGAAAGGTGAAGCTCTTTGC 59.396 47.619 3.07 0.00 43.29 3.68
323 325 2.957060 GACTTAACCAGGCCCCAAC 58.043 57.895 0.00 0.00 0.00 3.77
367 369 2.910544 TGGGTGACAACTGGTATAGGT 58.089 47.619 0.00 0.00 0.00 3.08
370 372 3.709653 GAGGATGGGTGACAACTGGTATA 59.290 47.826 0.00 0.00 0.00 1.47
410 417 2.344203 TTTTGGGTAATGGCGGCGG 61.344 57.895 9.78 0.00 0.00 6.13
411 418 1.153920 GTTTTGGGTAATGGCGGCG 60.154 57.895 0.51 0.51 0.00 6.46
412 419 0.108851 CTGTTTTGGGTAATGGCGGC 60.109 55.000 0.00 0.00 0.00 6.53
413 420 0.108851 GCTGTTTTGGGTAATGGCGG 60.109 55.000 0.00 0.00 0.00 6.13
520 527 4.668118 GCGGTGGTTTCGTCCCGA 62.668 66.667 0.43 0.00 43.01 5.14
523 530 2.592287 TTGGCGGTGGTTTCGTCC 60.592 61.111 0.00 0.00 0.00 4.79
538 545 0.740149 TGTTCTTGGTGCTGCACTTG 59.260 50.000 29.54 19.57 34.40 3.16
550 557 4.377841 GCAAAGATCTCCTCGTTGTTCTTG 60.378 45.833 0.00 0.00 42.99 3.02
555 562 1.000955 ACGCAAAGATCTCCTCGTTGT 59.999 47.619 0.00 0.00 42.99 3.32
574 581 3.125573 GGGCGGCGAGAAAAGGAC 61.126 66.667 12.98 0.00 0.00 3.85
696 703 0.249911 GCAGTCAGAAGACCCAACGT 60.250 55.000 0.00 0.00 46.15 3.99
707 714 3.075005 GGGGTAGCGGCAGTCAGA 61.075 66.667 1.45 0.00 0.00 3.27
708 715 4.162690 GGGGGTAGCGGCAGTCAG 62.163 72.222 1.45 0.00 0.00 3.51
768 775 1.677217 GCATCTTGAGAGAAGGCGGTT 60.677 52.381 0.00 0.00 35.07 4.44
813 820 1.201647 CGACAACCTCGTGGATACTGT 59.798 52.381 11.17 7.64 37.64 3.55
829 836 4.388080 CCGCGTGGTACGACGACA 62.388 66.667 30.87 0.00 46.05 4.35
848 858 2.267642 GACGGCATAGTGGTGGCA 59.732 61.111 1.48 0.00 44.19 4.92
851 861 2.890474 GGCGACGGCATAGTGGTG 60.890 66.667 17.49 0.00 42.47 4.17
874 884 2.282110 TGGTGCACATGGGGAACG 60.282 61.111 20.43 0.00 0.00 3.95
883 893 2.899838 GCTGTTCGGTGGTGCACA 60.900 61.111 20.43 1.62 35.86 4.57
886 896 1.724582 AAACTGCTGTTCGGTGGTGC 61.725 55.000 9.60 0.00 34.96 5.01
890 900 1.268539 GGACAAAACTGCTGTTCGGTG 60.269 52.381 9.60 10.45 34.96 4.94
892 902 1.264288 GAGGACAAAACTGCTGTTCGG 59.736 52.381 9.60 7.49 34.96 4.30
893 903 1.264288 GGAGGACAAAACTGCTGTTCG 59.736 52.381 9.60 6.84 34.96 3.95
917 927 2.970639 CGGCTTCGGAGAGGAACA 59.029 61.111 0.00 0.00 38.43 3.18
996 1006 2.204136 TGGCTGAGGTCCATGGGT 60.204 61.111 13.02 0.00 0.00 4.51
1017 1027 4.142773 ACACAGTTTGTCGTGTGGTAAAAG 60.143 41.667 7.34 0.00 46.95 2.27
1040 1050 2.180769 CGCTTCCGACCGTGATCA 59.819 61.111 0.00 0.00 36.29 2.92
1083 1093 1.070445 GTCCCAGAGGATGATGCCG 59.930 63.158 0.00 0.00 46.41 5.69
1132 1142 3.047877 CGGAAGTGGAACCGGCAC 61.048 66.667 0.00 1.00 44.59 5.01
1181 1191 1.845809 CGCATGGCCTAATCTTCGGC 61.846 60.000 3.32 0.00 45.55 5.54
1185 1195 0.839946 ACCTCGCATGGCCTAATCTT 59.160 50.000 3.32 0.00 0.00 2.40
1215 1225 1.632422 GGCCATTGATGCAAGAAACG 58.368 50.000 0.00 0.00 0.00 3.60
1216 1226 1.632422 CGGCCATTGATGCAAGAAAC 58.368 50.000 2.24 0.00 0.00 2.78
1221 1231 2.362760 AGGCGGCCATTGATGCAA 60.363 55.556 23.09 0.00 0.00 4.08
1223 1233 2.829914 TGAGGCGGCCATTGATGC 60.830 61.111 23.09 0.00 0.00 3.91
1234 1244 0.247736 AGCTCTACAAACCTGAGGCG 59.752 55.000 0.00 0.00 0.00 5.52
1248 1258 2.498167 ACGACTTCAAATTGCAGCTCT 58.502 42.857 0.00 0.00 0.00 4.09
1314 1324 3.440173 TGATCGTCCAGCTTTTCATTTCC 59.560 43.478 0.00 0.00 0.00 3.13
1319 1329 1.071542 TGGTGATCGTCCAGCTTTTCA 59.928 47.619 5.49 0.00 35.71 2.69
1346 1356 3.878778 AGTTCACTCATACCTCCATTGC 58.121 45.455 0.00 0.00 0.00 3.56
1351 1361 8.008513 TCACTATAAAGTTCACTCATACCTCC 57.991 38.462 0.00 0.00 31.97 4.30
1356 1366 8.988060 TCCCAATCACTATAAAGTTCACTCATA 58.012 33.333 0.00 0.00 31.97 2.15
1365 1375 4.960469 TCCTCGTCCCAATCACTATAAAGT 59.040 41.667 0.00 0.00 35.91 2.66
1369 1379 3.889538 CAGTCCTCGTCCCAATCACTATA 59.110 47.826 0.00 0.00 0.00 1.31
1419 1429 1.375523 AGATTTGGTGTCGTCGCCC 60.376 57.895 9.77 0.00 43.03 6.13
1455 1465 0.807667 GATCATCGCAGCCGTCTTGT 60.808 55.000 0.00 0.00 35.54 3.16
1457 1467 0.105593 ATGATCATCGCAGCCGTCTT 59.894 50.000 1.18 0.00 35.54 3.01
1586 1596 1.808411 TGACTTCGGGTGCAAGAATC 58.192 50.000 0.00 0.00 0.00 2.52
1626 1636 0.746063 TTTGCAGCCTGTGGTTCTTG 59.254 50.000 0.00 0.00 0.00 3.02
1639 1649 2.161012 CAGACATAGCCACACTTTGCAG 59.839 50.000 0.00 0.00 31.06 4.41
1683 1693 7.928307 AGTGCAATAGTTTGAATCTACACAT 57.072 32.000 0.00 0.00 34.60 3.21
1728 1738 6.426937 ACAGTTACCTGCTGTAGTGTTAATTG 59.573 38.462 0.00 0.00 44.41 2.32
1750 1760 8.344098 GTGCTGGTATAGAGTAAAGTAGTACAG 58.656 40.741 2.52 0.00 0.00 2.74
1752 1762 8.127954 GTGTGCTGGTATAGAGTAAAGTAGTAC 58.872 40.741 0.00 0.00 0.00 2.73
1757 1767 5.995565 TGTGTGCTGGTATAGAGTAAAGT 57.004 39.130 0.00 0.00 0.00 2.66
1760 1770 5.451937 GCAGATGTGTGCTGGTATAGAGTAA 60.452 44.000 0.00 0.00 40.54 2.24
1789 1799 7.824289 AGTACTCTTAAGCAATGTAAGCATCAA 59.176 33.333 0.00 0.00 33.50 2.57
1810 1820 8.784043 CAAAAACTAAGTGCCTTAATCAGTACT 58.216 33.333 0.00 0.00 0.00 2.73
1813 1823 6.447162 GCAAAAACTAAGTGCCTTAATCAGT 58.553 36.000 0.00 0.00 31.94 3.41
1815 1825 5.009210 ACGCAAAAACTAAGTGCCTTAATCA 59.991 36.000 0.00 0.00 34.73 2.57
1831 1841 1.742831 ACAGACTGAAGCACGCAAAAA 59.257 42.857 10.08 0.00 0.00 1.94
1837 1847 1.723542 CTTAGCACAGACTGAAGCACG 59.276 52.381 20.83 9.16 0.00 5.34
1846 1856 5.592054 TGCATGTAGTATCTTAGCACAGAC 58.408 41.667 0.00 0.00 0.00 3.51
1860 1870 8.962884 TGTGATCAGTTTATTATGCATGTAGT 57.037 30.769 10.16 0.00 0.00 2.73
1877 1887 9.639601 TGAAAGTACTAGTACATTTGTGATCAG 57.360 33.333 29.87 0.00 38.48 2.90
1967 1977 6.241645 AGGGCTGGAGAAATTAAGTATATGC 58.758 40.000 0.00 0.00 0.00 3.14
1978 1988 1.286248 AACGGTAGGGCTGGAGAAAT 58.714 50.000 0.00 0.00 0.00 2.17
1980 1990 1.061546 AAAACGGTAGGGCTGGAGAA 58.938 50.000 0.00 0.00 0.00 2.87
1986 1996 2.351706 TCAACAAAAACGGTAGGGCT 57.648 45.000 0.00 0.00 0.00 5.19
1987 1997 3.439895 TTTCAACAAAAACGGTAGGGC 57.560 42.857 0.00 0.00 0.00 5.19
1988 1998 5.593010 TCATTTTCAACAAAAACGGTAGGG 58.407 37.500 0.00 0.00 39.59 3.53
1989 1999 6.754675 ACTTCATTTTCAACAAAAACGGTAGG 59.245 34.615 0.00 0.00 39.59 3.18
1990 2000 7.749539 ACTTCATTTTCAACAAAAACGGTAG 57.250 32.000 0.00 0.00 39.59 3.18
1992 2002 9.974980 ATATACTTCATTTTCAACAAAAACGGT 57.025 25.926 0.00 0.00 39.59 4.83
2010 2020 9.208022 TGCTATGCACATTGAAGTATATACTTC 57.792 33.333 34.31 34.31 46.21 3.01
2011 2021 9.212641 CTGCTATGCACATTGAAGTATATACTT 57.787 33.333 24.86 24.86 40.68 2.24
2012 2022 8.370940 ACTGCTATGCACATTGAAGTATATACT 58.629 33.333 9.71 9.71 31.96 2.12
2013 2023 8.539770 ACTGCTATGCACATTGAAGTATATAC 57.460 34.615 4.60 4.60 31.96 1.47
2015 2025 9.159364 CATACTGCTATGCACATTGAAGTATAT 57.841 33.333 19.10 4.72 40.80 0.86
2016 2026 8.150296 ACATACTGCTATGCACATTGAAGTATA 58.850 33.333 19.10 2.92 40.80 1.47
2017 2027 6.994496 ACATACTGCTATGCACATTGAAGTAT 59.006 34.615 15.74 15.74 42.32 2.12
2018 2028 6.348498 ACATACTGCTATGCACATTGAAGTA 58.652 36.000 13.15 13.15 38.45 2.24
2019 2029 5.188434 ACATACTGCTATGCACATTGAAGT 58.812 37.500 10.05 10.05 36.59 3.01
2020 2030 5.746307 ACATACTGCTATGCACATTGAAG 57.254 39.130 0.00 0.00 34.08 3.02
2022 2032 9.586435 GTATATACATACTGCTATGCACATTGA 57.414 33.333 8.05 0.00 35.16 2.57
2023 2033 9.369904 TGTATATACATACTGCTATGCACATTG 57.630 33.333 11.62 0.00 38.30 2.82
2024 2034 9.371136 GTGTATATACATACTGCTATGCACATT 57.629 33.333 18.27 0.00 38.30 2.71
2025 2035 8.753133 AGTGTATATACATACTGCTATGCACAT 58.247 33.333 18.27 0.00 35.93 3.21
2026 2036 8.122472 AGTGTATATACATACTGCTATGCACA 57.878 34.615 18.27 0.00 35.93 4.57
2027 2037 8.988064 AAGTGTATATACATACTGCTATGCAC 57.012 34.615 18.27 1.59 38.30 4.57
2028 2038 9.996554 AAAAGTGTATATACATACTGCTATGCA 57.003 29.630 18.27 0.00 38.30 3.96
2055 2065 9.364989 GCATATACCACTTTTGCAAGATTAAAA 57.635 29.630 0.00 0.00 33.72 1.52
2056 2066 8.748412 AGCATATACCACTTTTGCAAGATTAAA 58.252 29.630 0.00 0.00 35.79 1.52
2057 2067 8.292444 AGCATATACCACTTTTGCAAGATTAA 57.708 30.769 0.00 0.00 35.79 1.40
2058 2068 7.880160 AGCATATACCACTTTTGCAAGATTA 57.120 32.000 0.00 0.00 35.79 1.75
2059 2069 6.780457 AGCATATACCACTTTTGCAAGATT 57.220 33.333 0.00 0.00 35.79 2.40
2060 2070 6.377996 TGAAGCATATACCACTTTTGCAAGAT 59.622 34.615 0.00 0.00 35.79 2.40
2061 2071 5.709631 TGAAGCATATACCACTTTTGCAAGA 59.290 36.000 0.00 0.00 35.79 3.02
2062 2072 5.953183 TGAAGCATATACCACTTTTGCAAG 58.047 37.500 0.00 0.00 35.79 4.01
2063 2073 5.973899 TGAAGCATATACCACTTTTGCAA 57.026 34.783 0.00 0.00 35.79 4.08
2064 2074 5.651576 TCATGAAGCATATACCACTTTTGCA 59.348 36.000 0.00 0.00 35.79 4.08
2065 2075 6.135290 TCATGAAGCATATACCACTTTTGC 57.865 37.500 0.00 0.00 0.00 3.68
2080 2090 7.601886 AGTGATATACTATTGTGCTCATGAAGC 59.398 37.037 0.00 3.53 44.37 3.86
2083 2093 9.520515 TCTAGTGATATACTATTGTGCTCATGA 57.479 33.333 0.00 0.00 40.94 3.07
2088 2098 9.920133 CACATTCTAGTGATATACTATTGTGCT 57.080 33.333 0.00 0.00 40.94 4.40
2089 2099 9.698309 ACACATTCTAGTGATATACTATTGTGC 57.302 33.333 16.39 0.00 42.91 4.57
2100 2110 9.890629 AAAAGAAGCATACACATTCTAGTGATA 57.109 29.630 0.57 0.00 42.05 2.15
2101 2111 8.798859 AAAAGAAGCATACACATTCTAGTGAT 57.201 30.769 0.57 0.00 42.05 3.06
2102 2112 8.621532 AAAAAGAAGCATACACATTCTAGTGA 57.378 30.769 0.57 0.00 42.05 3.41
2103 2113 9.979270 CTAAAAAGAAGCATACACATTCTAGTG 57.021 33.333 0.00 0.00 44.93 2.74
2104 2114 9.944376 TCTAAAAAGAAGCATACACATTCTAGT 57.056 29.630 0.00 0.00 33.05 2.57
2106 2116 8.869897 CGTCTAAAAAGAAGCATACACATTCTA 58.130 33.333 0.00 0.00 33.05 2.10
2107 2117 7.387948 ACGTCTAAAAAGAAGCATACACATTCT 59.612 33.333 0.00 0.00 34.81 2.40
2108 2118 7.519002 ACGTCTAAAAAGAAGCATACACATTC 58.481 34.615 0.00 0.00 0.00 2.67
2109 2119 7.435068 ACGTCTAAAAAGAAGCATACACATT 57.565 32.000 0.00 0.00 0.00 2.71
2110 2120 8.718102 ATACGTCTAAAAAGAAGCATACACAT 57.282 30.769 0.00 0.00 0.00 3.21
2111 2121 9.811995 ATATACGTCTAAAAAGAAGCATACACA 57.188 29.630 0.00 0.00 0.00 3.72
2116 2126 9.826574 TTGGTATATACGTCTAAAAAGAAGCAT 57.173 29.630 6.79 0.00 0.00 3.79
2117 2127 9.826574 ATTGGTATATACGTCTAAAAAGAAGCA 57.173 29.630 6.79 0.00 0.00 3.91
2160 2170 8.422566 GCTCTTATATTAGTTTACAGTGGGAGT 58.577 37.037 0.00 0.00 0.00 3.85
2161 2171 7.595502 CGCTCTTATATTAGTTTACAGTGGGAG 59.404 40.741 0.00 0.00 0.00 4.30
2162 2172 7.069085 ACGCTCTTATATTAGTTTACAGTGGGA 59.931 37.037 0.00 0.00 0.00 4.37
2163 2173 7.208080 ACGCTCTTATATTAGTTTACAGTGGG 58.792 38.462 0.00 0.00 0.00 4.61
2164 2174 8.644318 AACGCTCTTATATTAGTTTACAGTGG 57.356 34.615 0.00 0.00 0.00 4.00
2200 2210 9.686683 AGCTAATGGTTGTTTAGATCACTATTT 57.313 29.630 0.00 0.00 0.00 1.40
2201 2211 9.331282 GAGCTAATGGTTGTTTAGATCACTATT 57.669 33.333 0.00 0.00 40.24 1.73
2202 2212 8.486210 TGAGCTAATGGTTGTTTAGATCACTAT 58.514 33.333 7.17 0.00 43.41 2.12
2203 2213 7.847096 TGAGCTAATGGTTGTTTAGATCACTA 58.153 34.615 7.17 0.00 43.41 2.74
2204 2214 6.711277 TGAGCTAATGGTTGTTTAGATCACT 58.289 36.000 7.17 0.00 43.41 3.41
2205 2215 6.985188 TGAGCTAATGGTTGTTTAGATCAC 57.015 37.500 7.17 0.00 43.41 3.06
2207 2217 8.662781 TGTATGAGCTAATGGTTGTTTAGATC 57.337 34.615 0.00 2.62 40.68 2.75
2208 2218 9.632638 AATGTATGAGCTAATGGTTGTTTAGAT 57.367 29.630 0.00 0.00 0.00 1.98
2209 2219 9.461312 AAATGTATGAGCTAATGGTTGTTTAGA 57.539 29.630 0.00 0.00 0.00 2.10
2234 2244 5.746990 TCCTTCAAGAAAACCCACAAAAA 57.253 34.783 0.00 0.00 0.00 1.94
2235 2245 5.746990 TTCCTTCAAGAAAACCCACAAAA 57.253 34.783 0.00 0.00 0.00 2.44
2236 2246 5.746990 TTTCCTTCAAGAAAACCCACAAA 57.253 34.783 0.00 0.00 32.90 2.83
2237 2247 5.746990 TTTTCCTTCAAGAAAACCCACAA 57.253 34.783 0.00 0.00 40.04 3.33
2238 2248 5.746990 TTTTTCCTTCAAGAAAACCCACA 57.253 34.783 0.00 0.00 43.53 4.17
2257 2267 7.148474 CCGAGCACATTGTAGTGTATACTTTTT 60.148 37.037 4.17 0.00 41.52 1.94
2258 2268 6.312918 CCGAGCACATTGTAGTGTATACTTTT 59.687 38.462 4.17 0.00 41.52 2.27
2259 2269 5.810587 CCGAGCACATTGTAGTGTATACTTT 59.189 40.000 4.17 0.00 41.52 2.66
2260 2270 5.105473 ACCGAGCACATTGTAGTGTATACTT 60.105 40.000 4.17 0.00 41.52 2.24
2261 2271 4.401519 ACCGAGCACATTGTAGTGTATACT 59.598 41.667 4.17 0.00 41.52 2.12
2262 2272 4.679662 ACCGAGCACATTGTAGTGTATAC 58.320 43.478 0.00 0.00 41.52 1.47
2263 2273 4.994907 ACCGAGCACATTGTAGTGTATA 57.005 40.909 0.00 0.00 41.52 1.47
2264 2274 3.887621 ACCGAGCACATTGTAGTGTAT 57.112 42.857 0.00 0.00 41.52 2.29
2265 2275 3.760151 ACTACCGAGCACATTGTAGTGTA 59.240 43.478 7.13 0.00 41.60 2.90
2266 2276 2.561419 ACTACCGAGCACATTGTAGTGT 59.439 45.455 7.13 0.00 41.60 3.55
2267 2277 3.232213 ACTACCGAGCACATTGTAGTG 57.768 47.619 7.13 0.00 41.60 2.74
2268 2278 6.896021 ATATACTACCGAGCACATTGTAGT 57.104 37.500 11.06 11.06 44.38 2.73
2269 2279 8.041829 AGTATATACTACCGAGCACATTGTAG 57.958 38.462 13.88 0.00 37.34 2.74
2270 2280 7.991084 AGTATATACTACCGAGCACATTGTA 57.009 36.000 13.88 0.00 34.13 2.41
2271 2281 6.896021 AGTATATACTACCGAGCACATTGT 57.104 37.500 13.88 0.00 34.13 2.71
2272 2282 8.265165 TCTAGTATATACTACCGAGCACATTG 57.735 38.462 17.03 5.14 37.73 2.82
2273 2283 8.859236 TTCTAGTATATACTACCGAGCACATT 57.141 34.615 17.03 0.00 37.73 2.71
2274 2284 7.553402 CCTTCTAGTATATACTACCGAGCACAT 59.447 40.741 17.03 0.00 37.73 3.21
2275 2285 6.877855 CCTTCTAGTATATACTACCGAGCACA 59.122 42.308 17.03 0.00 37.73 4.57
2276 2286 6.183360 GCCTTCTAGTATATACTACCGAGCAC 60.183 46.154 17.03 7.69 37.73 4.40
2277 2287 5.879223 GCCTTCTAGTATATACTACCGAGCA 59.121 44.000 17.03 1.38 37.73 4.26
2278 2288 6.114767 AGCCTTCTAGTATATACTACCGAGC 58.885 44.000 17.03 16.30 37.73 5.03
2279 2289 7.823310 TCAAGCCTTCTAGTATATACTACCGAG 59.177 40.741 17.03 10.49 37.73 4.63
2280 2290 7.683578 TCAAGCCTTCTAGTATATACTACCGA 58.316 38.462 17.03 11.82 37.73 4.69
2281 2291 7.414319 GCTCAAGCCTTCTAGTATATACTACCG 60.414 44.444 17.03 9.91 34.87 4.02
2282 2292 7.414319 CGCTCAAGCCTTCTAGTATATACTACC 60.414 44.444 17.03 5.47 36.34 3.18
2283 2293 7.465989 CGCTCAAGCCTTCTAGTATATACTAC 58.534 42.308 17.03 8.50 36.34 2.73
2284 2294 6.093771 GCGCTCAAGCCTTCTAGTATATACTA 59.906 42.308 19.25 19.25 36.34 1.82
2285 2295 5.106078 GCGCTCAAGCCTTCTAGTATATACT 60.106 44.000 19.07 19.07 37.80 2.12
2286 2296 5.096849 GCGCTCAAGCCTTCTAGTATATAC 58.903 45.833 0.00 4.60 37.91 1.47
2287 2297 4.142665 CGCGCTCAAGCCTTCTAGTATATA 60.143 45.833 5.56 0.00 37.91 0.86
2288 2298 3.366476 CGCGCTCAAGCCTTCTAGTATAT 60.366 47.826 5.56 0.00 37.91 0.86
2289 2299 2.031069 CGCGCTCAAGCCTTCTAGTATA 60.031 50.000 5.56 0.00 37.91 1.47
2290 2300 1.269309 CGCGCTCAAGCCTTCTAGTAT 60.269 52.381 5.56 0.00 37.91 2.12
2291 2301 0.100682 CGCGCTCAAGCCTTCTAGTA 59.899 55.000 5.56 0.00 37.91 1.82
2292 2302 1.153745 CGCGCTCAAGCCTTCTAGT 60.154 57.895 5.56 0.00 37.91 2.57
2293 2303 2.520904 GCGCGCTCAAGCCTTCTAG 61.521 63.158 26.67 0.00 37.91 2.43
2294 2304 2.507110 AAGCGCGCTCAAGCCTTCTA 62.507 55.000 36.57 0.00 37.91 2.10
2295 2305 3.890936 AAGCGCGCTCAAGCCTTCT 62.891 57.895 36.57 12.91 37.91 2.85
2296 2306 2.970974 AAAGCGCGCTCAAGCCTTC 61.971 57.895 36.57 0.00 37.91 3.46
2297 2307 2.980233 AAAGCGCGCTCAAGCCTT 60.980 55.556 36.57 21.21 37.91 4.35
2298 2308 3.730761 CAAAGCGCGCTCAAGCCT 61.731 61.111 36.57 15.57 37.91 4.58
2301 2311 4.029186 TGGCAAAGCGCGCTCAAG 62.029 61.111 36.57 26.34 43.84 3.02
2302 2312 4.326766 GTGGCAAAGCGCGCTCAA 62.327 61.111 36.57 13.46 43.84 3.02
2309 2319 2.806198 CAATGGCGTGGCAAAGCG 60.806 61.111 9.60 1.08 0.00 4.68
2310 2320 2.432972 CCAATGGCGTGGCAAAGC 60.433 61.111 7.58 7.58 0.00 3.51
2311 2321 1.373246 CACCAATGGCGTGGCAAAG 60.373 57.895 0.00 0.00 43.00 2.77
2312 2322 1.680522 AACACCAATGGCGTGGCAAA 61.681 50.000 0.00 0.00 43.00 3.68
2313 2323 2.130426 AACACCAATGGCGTGGCAA 61.130 52.632 0.00 0.00 43.00 4.52
2314 2324 2.520500 AACACCAATGGCGTGGCA 60.521 55.556 0.00 0.00 43.00 4.92
2315 2325 2.049248 CAACACCAATGGCGTGGC 60.049 61.111 0.00 0.00 43.00 5.01
2316 2326 0.597118 CAACAACACCAATGGCGTGG 60.597 55.000 0.00 0.00 44.92 4.94
2317 2327 0.383590 TCAACAACACCAATGGCGTG 59.616 50.000 0.00 0.00 37.26 5.34
2318 2328 0.667993 CTCAACAACACCAATGGCGT 59.332 50.000 0.00 0.00 0.00 5.68
2319 2329 0.950836 TCTCAACAACACCAATGGCG 59.049 50.000 0.00 0.00 0.00 5.69
2320 2330 3.256631 AGAATCTCAACAACACCAATGGC 59.743 43.478 0.00 0.00 0.00 4.40
2321 2331 5.458041 AAGAATCTCAACAACACCAATGG 57.542 39.130 0.00 0.00 0.00 3.16
2322 2332 8.870160 TTTTAAGAATCTCAACAACACCAATG 57.130 30.769 0.00 0.00 0.00 2.82
2481 2491 8.735315 TCGACATTCTCAATATTAAGCCAAAAA 58.265 29.630 0.00 0.00 0.00 1.94
2482 2492 8.275015 TCGACATTCTCAATATTAAGCCAAAA 57.725 30.769 0.00 0.00 0.00 2.44
2483 2493 7.857734 TCGACATTCTCAATATTAAGCCAAA 57.142 32.000 0.00 0.00 0.00 3.28
2484 2494 9.725019 ATATCGACATTCTCAATATTAAGCCAA 57.275 29.630 0.00 0.00 0.00 4.52
2485 2495 9.725019 AATATCGACATTCTCAATATTAAGCCA 57.275 29.630 0.00 0.00 0.00 4.75
2491 2501 9.683069 GCCAAAAATATCGACATTCTCAATATT 57.317 29.630 0.00 0.00 0.00 1.28
2492 2502 9.071276 AGCCAAAAATATCGACATTCTCAATAT 57.929 29.630 0.00 0.00 0.00 1.28
2493 2503 8.450578 AGCCAAAAATATCGACATTCTCAATA 57.549 30.769 0.00 0.00 0.00 1.90
2494 2504 7.284034 AGAGCCAAAAATATCGACATTCTCAAT 59.716 33.333 5.27 0.00 0.00 2.57
2495 2505 6.599244 AGAGCCAAAAATATCGACATTCTCAA 59.401 34.615 5.27 0.00 0.00 3.02
2496 2506 6.115446 AGAGCCAAAAATATCGACATTCTCA 58.885 36.000 5.27 0.00 0.00 3.27
2497 2507 6.610741 AGAGCCAAAAATATCGACATTCTC 57.389 37.500 0.00 0.00 0.00 2.87
2498 2508 8.398665 GTTTAGAGCCAAAAATATCGACATTCT 58.601 33.333 0.00 0.00 0.00 2.40
2499 2509 8.398665 AGTTTAGAGCCAAAAATATCGACATTC 58.601 33.333 0.00 0.00 0.00 2.67
2500 2510 8.281212 AGTTTAGAGCCAAAAATATCGACATT 57.719 30.769 0.00 0.00 0.00 2.71
2501 2511 7.865706 AGTTTAGAGCCAAAAATATCGACAT 57.134 32.000 0.00 0.00 0.00 3.06
2502 2512 7.361713 CCAAGTTTAGAGCCAAAAATATCGACA 60.362 37.037 0.00 0.00 0.00 4.35
2503 2513 6.967199 CCAAGTTTAGAGCCAAAAATATCGAC 59.033 38.462 0.00 0.00 0.00 4.20
2504 2514 6.657541 ACCAAGTTTAGAGCCAAAAATATCGA 59.342 34.615 0.00 0.00 0.00 3.59
2505 2515 6.852664 ACCAAGTTTAGAGCCAAAAATATCG 58.147 36.000 0.00 0.00 0.00 2.92
2506 2516 7.826690 TGACCAAGTTTAGAGCCAAAAATATC 58.173 34.615 0.00 0.00 0.00 1.63
2507 2517 7.775053 TGACCAAGTTTAGAGCCAAAAATAT 57.225 32.000 0.00 0.00 0.00 1.28
2508 2518 7.589958 TTGACCAAGTTTAGAGCCAAAAATA 57.410 32.000 0.00 0.00 0.00 1.40
2509 2519 6.478512 TTGACCAAGTTTAGAGCCAAAAAT 57.521 33.333 0.00 0.00 0.00 1.82
2510 2520 5.923733 TTGACCAAGTTTAGAGCCAAAAA 57.076 34.783 0.00 0.00 0.00 1.94
2511 2521 5.420739 ACTTTGACCAAGTTTAGAGCCAAAA 59.579 36.000 0.00 0.00 43.89 2.44
2512 2522 4.953579 ACTTTGACCAAGTTTAGAGCCAAA 59.046 37.500 0.00 0.00 43.89 3.28
2513 2523 4.532834 ACTTTGACCAAGTTTAGAGCCAA 58.467 39.130 0.00 0.00 43.89 4.52
2514 2524 4.164843 ACTTTGACCAAGTTTAGAGCCA 57.835 40.909 0.00 0.00 43.89 4.75
2524 2534 8.624776 AGTCAGATTTCTTTAACTTTGACCAAG 58.375 33.333 0.00 0.00 35.50 3.61
2525 2535 8.519799 AGTCAGATTTCTTTAACTTTGACCAA 57.480 30.769 0.00 0.00 35.50 3.67
2526 2536 8.519799 AAGTCAGATTTCTTTAACTTTGACCA 57.480 30.769 0.00 0.00 35.50 4.02
2527 2537 9.452065 GAAAGTCAGATTTCTTTAACTTTGACC 57.548 33.333 13.23 2.13 36.46 4.02
2528 2538 9.452065 GGAAAGTCAGATTTCTTTAACTTTGAC 57.548 33.333 13.23 0.00 38.86 3.18
2529 2539 9.184523 TGGAAAGTCAGATTTCTTTAACTTTGA 57.815 29.630 13.23 3.05 38.86 2.69
2530 2540 9.801873 TTGGAAAGTCAGATTTCTTTAACTTTG 57.198 29.630 13.23 0.00 38.86 2.77
2556 2566 7.181305 CCCAAAATATAAGGGGTAGTGGTTTTT 59.819 37.037 0.00 0.00 38.98 1.94
2557 2567 6.670464 CCCAAAATATAAGGGGTAGTGGTTTT 59.330 38.462 0.00 0.00 38.98 2.43
2558 2568 6.010560 TCCCAAAATATAAGGGGTAGTGGTTT 60.011 38.462 7.08 0.00 43.03 3.27
2559 2569 5.496902 TCCCAAAATATAAGGGGTAGTGGTT 59.503 40.000 7.08 0.00 43.03 3.67
2560 2570 5.047906 TCCCAAAATATAAGGGGTAGTGGT 58.952 41.667 7.08 0.00 43.03 4.16
2561 2571 5.133830 AGTCCCAAAATATAAGGGGTAGTGG 59.866 44.000 7.08 0.00 43.03 4.00
2562 2572 6.062095 CAGTCCCAAAATATAAGGGGTAGTG 58.938 44.000 7.08 4.04 43.03 2.74
2563 2573 5.133830 CCAGTCCCAAAATATAAGGGGTAGT 59.866 44.000 7.08 0.00 43.03 2.73
2564 2574 5.133830 ACCAGTCCCAAAATATAAGGGGTAG 59.866 44.000 7.08 0.00 43.03 3.18
2565 2575 5.047906 ACCAGTCCCAAAATATAAGGGGTA 58.952 41.667 7.08 0.00 43.03 3.69
2566 2576 3.862309 ACCAGTCCCAAAATATAAGGGGT 59.138 43.478 7.08 0.00 43.03 4.95
2567 2577 4.215109 CACCAGTCCCAAAATATAAGGGG 58.785 47.826 7.08 3.76 43.03 4.79
2568 2578 4.079443 TCCACCAGTCCCAAAATATAAGGG 60.079 45.833 0.00 0.00 44.22 3.95
2569 2579 5.124036 TCCACCAGTCCCAAAATATAAGG 57.876 43.478 0.00 0.00 0.00 2.69
2570 2580 8.940397 ATATTCCACCAGTCCCAAAATATAAG 57.060 34.615 0.00 0.00 0.00 1.73
2571 2581 9.722317 AAATATTCCACCAGTCCCAAAATATAA 57.278 29.630 0.00 0.00 0.00 0.98
2573 2583 9.367160 CTAAATATTCCACCAGTCCCAAAATAT 57.633 33.333 0.00 0.00 0.00 1.28
2574 2584 8.340757 ACTAAATATTCCACCAGTCCCAAAATA 58.659 33.333 0.00 0.00 0.00 1.40
2575 2585 7.189087 ACTAAATATTCCACCAGTCCCAAAAT 58.811 34.615 0.00 0.00 0.00 1.82
2576 2586 6.557568 ACTAAATATTCCACCAGTCCCAAAA 58.442 36.000 0.00 0.00 0.00 2.44
2577 2587 6.147437 ACTAAATATTCCACCAGTCCCAAA 57.853 37.500 0.00 0.00 0.00 3.28
2578 2588 5.789574 ACTAAATATTCCACCAGTCCCAA 57.210 39.130 0.00 0.00 0.00 4.12
2579 2589 5.789574 AACTAAATATTCCACCAGTCCCA 57.210 39.130 0.00 0.00 0.00 4.37
2580 2590 5.359860 CCAAACTAAATATTCCACCAGTCCC 59.640 44.000 0.00 0.00 0.00 4.46
2581 2591 5.163550 GCCAAACTAAATATTCCACCAGTCC 60.164 44.000 0.00 0.00 0.00 3.85
2582 2592 5.448632 CGCCAAACTAAATATTCCACCAGTC 60.449 44.000 0.00 0.00 0.00 3.51
2583 2593 4.398044 CGCCAAACTAAATATTCCACCAGT 59.602 41.667 0.00 0.00 0.00 4.00
2584 2594 4.202010 CCGCCAAACTAAATATTCCACCAG 60.202 45.833 0.00 0.00 0.00 4.00
2585 2595 3.697045 CCGCCAAACTAAATATTCCACCA 59.303 43.478 0.00 0.00 0.00 4.17
2586 2596 3.949113 TCCGCCAAACTAAATATTCCACC 59.051 43.478 0.00 0.00 0.00 4.61
2587 2597 5.507315 CCATCCGCCAAACTAAATATTCCAC 60.507 44.000 0.00 0.00 0.00 4.02
2588 2598 4.582656 CCATCCGCCAAACTAAATATTCCA 59.417 41.667 0.00 0.00 0.00 3.53
2589 2599 4.022329 CCCATCCGCCAAACTAAATATTCC 60.022 45.833 0.00 0.00 0.00 3.01
2590 2600 4.022329 CCCCATCCGCCAAACTAAATATTC 60.022 45.833 0.00 0.00 0.00 1.75
2591 2601 3.895041 CCCCATCCGCCAAACTAAATATT 59.105 43.478 0.00 0.00 0.00 1.28
2592 2602 3.496331 CCCCATCCGCCAAACTAAATAT 58.504 45.455 0.00 0.00 0.00 1.28
2593 2603 2.423660 CCCCCATCCGCCAAACTAAATA 60.424 50.000 0.00 0.00 0.00 1.40
2594 2604 1.687996 CCCCCATCCGCCAAACTAAAT 60.688 52.381 0.00 0.00 0.00 1.40
2595 2605 0.323908 CCCCCATCCGCCAAACTAAA 60.324 55.000 0.00 0.00 0.00 1.85
2596 2606 1.208844 TCCCCCATCCGCCAAACTAA 61.209 55.000 0.00 0.00 0.00 2.24
2597 2607 1.616930 TCCCCCATCCGCCAAACTA 60.617 57.895 0.00 0.00 0.00 2.24
2598 2608 2.938798 TCCCCCATCCGCCAAACT 60.939 61.111 0.00 0.00 0.00 2.66
2599 2609 2.440247 CTCCCCCATCCGCCAAAC 60.440 66.667 0.00 0.00 0.00 2.93
2600 2610 2.612430 TCTCCCCCATCCGCCAAA 60.612 61.111 0.00 0.00 0.00 3.28
2601 2611 3.407967 GTCTCCCCCATCCGCCAA 61.408 66.667 0.00 0.00 0.00 4.52
2604 2614 3.234730 ATCGTCTCCCCCATCCGC 61.235 66.667 0.00 0.00 0.00 5.54
2605 2615 2.737180 CATCGTCTCCCCCATCCG 59.263 66.667 0.00 0.00 0.00 4.18
2606 2616 1.459539 TCCATCGTCTCCCCCATCC 60.460 63.158 0.00 0.00 0.00 3.51
2607 2617 0.760945 ACTCCATCGTCTCCCCCATC 60.761 60.000 0.00 0.00 0.00 3.51
2608 2618 1.050988 CACTCCATCGTCTCCCCCAT 61.051 60.000 0.00 0.00 0.00 4.00
2609 2619 1.685765 CACTCCATCGTCTCCCCCA 60.686 63.158 0.00 0.00 0.00 4.96
2610 2620 1.686110 ACACTCCATCGTCTCCCCC 60.686 63.158 0.00 0.00 0.00 5.40
2611 2621 1.258445 ACACACTCCATCGTCTCCCC 61.258 60.000 0.00 0.00 0.00 4.81
2612 2622 0.608640 AACACACTCCATCGTCTCCC 59.391 55.000 0.00 0.00 0.00 4.30
2613 2623 2.457366 AAACACACTCCATCGTCTCC 57.543 50.000 0.00 0.00 0.00 3.71
2614 2624 4.929808 ACATAAAACACACTCCATCGTCTC 59.070 41.667 0.00 0.00 0.00 3.36
2615 2625 4.894784 ACATAAAACACACTCCATCGTCT 58.105 39.130 0.00 0.00 0.00 4.18
2616 2626 5.607119 AACATAAAACACACTCCATCGTC 57.393 39.130 0.00 0.00 0.00 4.20
2617 2627 7.681939 ATAAACATAAAACACACTCCATCGT 57.318 32.000 0.00 0.00 0.00 3.73
2618 2628 8.964420 AAATAAACATAAAACACACTCCATCG 57.036 30.769 0.00 0.00 0.00 3.84
2640 2650 9.119418 GGCTTGCCAAATAACCAAATTATAAAT 57.881 29.630 6.79 0.00 32.86 1.40
2641 2651 8.325046 AGGCTTGCCAAATAACCAAATTATAAA 58.675 29.630 14.54 0.00 32.86 1.40
2642 2652 7.856415 AGGCTTGCCAAATAACCAAATTATAA 58.144 30.769 14.54 0.00 32.86 0.98
2643 2653 7.430760 AGGCTTGCCAAATAACCAAATTATA 57.569 32.000 14.54 0.00 32.86 0.98
2644 2654 6.312141 AGGCTTGCCAAATAACCAAATTAT 57.688 33.333 14.54 0.00 34.78 1.28
2645 2655 5.753721 AGGCTTGCCAAATAACCAAATTA 57.246 34.783 14.54 0.00 0.00 1.40
2646 2656 4.639078 AGGCTTGCCAAATAACCAAATT 57.361 36.364 14.54 0.00 0.00 1.82
2647 2657 4.639078 AAGGCTTGCCAAATAACCAAAT 57.361 36.364 14.54 0.00 0.00 2.32
2648 2658 4.141620 TGAAAGGCTTGCCAAATAACCAAA 60.142 37.500 14.54 0.00 0.00 3.28
2649 2659 3.389329 TGAAAGGCTTGCCAAATAACCAA 59.611 39.130 14.54 0.00 0.00 3.67
2650 2660 2.968574 TGAAAGGCTTGCCAAATAACCA 59.031 40.909 14.54 0.00 0.00 3.67
2651 2661 3.676291 TGAAAGGCTTGCCAAATAACC 57.324 42.857 14.54 0.00 0.00 2.85
2652 2662 3.934579 CCATGAAAGGCTTGCCAAATAAC 59.065 43.478 14.54 0.33 0.00 1.89
2653 2663 3.582208 ACCATGAAAGGCTTGCCAAATAA 59.418 39.130 14.54 0.00 0.00 1.40
2654 2664 3.055963 CACCATGAAAGGCTTGCCAAATA 60.056 43.478 14.54 0.00 0.00 1.40
2655 2665 1.980036 ACCATGAAAGGCTTGCCAAAT 59.020 42.857 14.54 0.00 0.00 2.32
2656 2666 1.070445 CACCATGAAAGGCTTGCCAAA 59.930 47.619 14.54 0.00 0.00 3.28
2657 2667 0.680618 CACCATGAAAGGCTTGCCAA 59.319 50.000 14.54 0.00 0.00 4.52
2658 2668 0.469705 ACACCATGAAAGGCTTGCCA 60.470 50.000 14.54 2.46 0.00 4.92
2659 2669 0.037975 CACACCATGAAAGGCTTGCC 60.038 55.000 0.00 2.97 0.00 4.52
2660 2670 0.961019 TCACACCATGAAAGGCTTGC 59.039 50.000 0.00 0.00 33.02 4.01
2661 2671 3.508793 AGAATCACACCATGAAAGGCTTG 59.491 43.478 0.00 0.00 41.93 4.01
2662 2672 3.508793 CAGAATCACACCATGAAAGGCTT 59.491 43.478 0.00 0.00 41.93 4.35
2663 2673 3.087031 CAGAATCACACCATGAAAGGCT 58.913 45.455 0.00 0.00 41.93 4.58
2664 2674 2.821969 ACAGAATCACACCATGAAAGGC 59.178 45.455 0.00 0.00 41.93 4.35
2665 2675 6.764308 AATACAGAATCACACCATGAAAGG 57.236 37.500 0.00 0.00 41.93 3.11
2666 2676 7.859377 GCATAATACAGAATCACACCATGAAAG 59.141 37.037 0.00 0.00 41.93 2.62
2667 2677 7.467131 CGCATAATACAGAATCACACCATGAAA 60.467 37.037 0.00 0.00 41.93 2.69
2668 2678 6.018016 CGCATAATACAGAATCACACCATGAA 60.018 38.462 0.00 0.00 41.93 2.57
2669 2679 5.466393 CGCATAATACAGAATCACACCATGA 59.534 40.000 0.00 0.00 43.13 3.07
2670 2680 5.682869 CGCATAATACAGAATCACACCATG 58.317 41.667 0.00 0.00 0.00 3.66
2671 2681 4.214119 GCGCATAATACAGAATCACACCAT 59.786 41.667 0.30 0.00 0.00 3.55
2672 2682 3.559655 GCGCATAATACAGAATCACACCA 59.440 43.478 0.30 0.00 0.00 4.17
2673 2683 3.809832 AGCGCATAATACAGAATCACACC 59.190 43.478 11.47 0.00 0.00 4.16
2674 2684 6.525121 TTAGCGCATAATACAGAATCACAC 57.475 37.500 11.47 0.00 0.00 3.82
2675 2685 6.928492 TGATTAGCGCATAATACAGAATCACA 59.072 34.615 11.47 0.00 34.10 3.58
2676 2686 7.351414 TGATTAGCGCATAATACAGAATCAC 57.649 36.000 11.47 0.00 34.10 3.06
2677 2687 7.657354 AGTTGATTAGCGCATAATACAGAATCA 59.343 33.333 11.47 7.29 34.10 2.57
2678 2688 8.023050 AGTTGATTAGCGCATAATACAGAATC 57.977 34.615 11.47 4.85 34.10 2.52
2679 2689 7.657354 TGAGTTGATTAGCGCATAATACAGAAT 59.343 33.333 11.47 0.00 34.10 2.40
2680 2690 6.983890 TGAGTTGATTAGCGCATAATACAGAA 59.016 34.615 11.47 0.72 34.10 3.02
2681 2691 6.512297 TGAGTTGATTAGCGCATAATACAGA 58.488 36.000 11.47 0.00 34.10 3.41
2682 2692 6.769608 TGAGTTGATTAGCGCATAATACAG 57.230 37.500 11.47 0.00 34.10 2.74
2683 2693 7.154656 AGATGAGTTGATTAGCGCATAATACA 58.845 34.615 11.47 8.42 34.10 2.29
2684 2694 7.588143 AGATGAGTTGATTAGCGCATAATAC 57.412 36.000 11.47 7.19 34.10 1.89
2685 2695 8.607441 AAAGATGAGTTGATTAGCGCATAATA 57.393 30.769 11.47 0.00 34.10 0.98
2686 2696 7.502120 AAAGATGAGTTGATTAGCGCATAAT 57.498 32.000 11.47 10.89 36.77 1.28
2687 2697 6.925610 AAAGATGAGTTGATTAGCGCATAA 57.074 33.333 11.47 5.95 28.53 1.90
2688 2698 6.316140 ACAAAAGATGAGTTGATTAGCGCATA 59.684 34.615 11.47 0.00 28.53 3.14
2689 2699 5.124457 ACAAAAGATGAGTTGATTAGCGCAT 59.876 36.000 11.47 0.00 30.83 4.73
2690 2700 4.455533 ACAAAAGATGAGTTGATTAGCGCA 59.544 37.500 11.47 0.00 0.00 6.09
2691 2701 4.974591 ACAAAAGATGAGTTGATTAGCGC 58.025 39.130 0.00 0.00 0.00 5.92
2692 2702 5.796935 CCAACAAAAGATGAGTTGATTAGCG 59.203 40.000 6.13 0.00 43.93 4.26
2693 2703 6.681777 ACCAACAAAAGATGAGTTGATTAGC 58.318 36.000 6.13 0.00 43.93 3.09
2696 2706 8.695456 ACTTTACCAACAAAAGATGAGTTGATT 58.305 29.630 6.13 0.00 43.93 2.57
2697 2707 8.237811 ACTTTACCAACAAAAGATGAGTTGAT 57.762 30.769 6.13 0.00 43.93 2.57
2698 2708 7.639113 ACTTTACCAACAAAAGATGAGTTGA 57.361 32.000 6.13 0.00 43.93 3.18
2699 2709 9.796120 TTTACTTTACCAACAAAAGATGAGTTG 57.204 29.630 2.79 0.00 41.61 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.