Multiple sequence alignment - TraesCS3B01G277800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G277800 chr3B 100.000 5257 0 0 1 5257 447978120 447972864 0.000000e+00 9708.0
1 TraesCS3B01G277800 chr3B 82.375 522 51 22 3729 4213 53959053 53959570 2.930000e-112 416.0
2 TraesCS3B01G277800 chr3B 87.542 297 19 10 3729 4011 54315304 54315596 1.410000e-85 327.0
3 TraesCS3B01G277800 chr3B 83.030 165 27 1 487 651 527711099 527711262 1.180000e-31 148.0
4 TraesCS3B01G277800 chr3B 91.379 58 5 0 4124 4181 54315720 54315777 4.360000e-11 80.5
5 TraesCS3B01G277800 chr3D 93.209 3858 121 41 780 4523 348152938 348149108 0.000000e+00 5542.0
6 TraesCS3B01G277800 chr3D 87.467 750 81 11 1 747 348155148 348154409 0.000000e+00 852.0
7 TraesCS3B01G277800 chr3D 86.087 575 49 6 4702 5257 125686633 125686071 1.630000e-164 590.0
8 TraesCS3B01G277800 chr3D 79.861 576 67 24 3729 4267 31802636 31803199 4.970000e-100 375.0
9 TraesCS3B01G277800 chr3D 85.256 312 21 10 3729 4028 31966711 31966413 1.110000e-76 298.0
10 TraesCS3B01G277800 chr3D 80.726 358 51 9 3187 3530 496503345 496502992 4.040000e-66 263.0
11 TraesCS3B01G277800 chr3D 89.256 121 8 2 4520 4635 561469615 561469735 4.240000e-31 147.0
12 TraesCS3B01G277800 chr3D 94.118 85 4 1 705 788 348154422 348154338 1.540000e-25 128.0
13 TraesCS3B01G277800 chr3D 84.746 118 13 2 4523 4635 208583202 208583085 4.300000e-21 113.0
14 TraesCS3B01G277800 chr3D 94.030 67 4 0 4705 4771 361801934 361802000 9.310000e-18 102.0
15 TraesCS3B01G277800 chr3A 95.105 2247 62 15 1254 3456 467098929 467096687 0.000000e+00 3496.0
16 TraesCS3B01G277800 chr3A 92.527 1017 34 9 3542 4523 467096622 467095613 0.000000e+00 1419.0
17 TraesCS3B01G277800 chr3A 96.907 485 11 1 775 1255 467099495 467099011 0.000000e+00 809.0
18 TraesCS3B01G277800 chr3A 81.297 663 63 20 4646 5257 141011512 141012164 1.020000e-131 481.0
19 TraesCS3B01G277800 chr3A 86.792 318 27 7 3175 3480 662791211 662791525 1.810000e-89 340.0
20 TraesCS3B01G277800 chr3A 82.482 137 18 3 4514 4645 727911888 727912023 1.200000e-21 115.0
21 TraesCS3B01G277800 chr6A 87.230 556 39 6 4704 5257 7716023 7715498 5.820000e-169 604.0
22 TraesCS3B01G277800 chr2D 82.111 777 65 27 4536 5257 79529546 79528789 9.740000e-167 597.0
23 TraesCS3B01G277800 chr2D 82.317 164 22 4 462 625 140340161 140340317 9.180000e-28 135.0
24 TraesCS3B01G277800 chr2D 82.812 128 17 2 4523 4645 37231685 37231558 5.570000e-20 110.0
25 TraesCS3B01G277800 chr2B 83.852 514 39 17 4766 5257 165096180 165095689 2.890000e-122 449.0
26 TraesCS3B01G277800 chr2B 79.819 332 49 11 3216 3532 531050160 531050488 5.300000e-55 226.0
27 TraesCS3B01G277800 chr2B 81.152 191 31 5 462 650 697985742 697985555 1.180000e-31 148.0
28 TraesCS3B01G277800 chr2B 87.603 121 10 2 4520 4635 165096547 165096427 9.180000e-28 135.0
29 TraesCS3B01G277800 chr4D 86.059 373 41 8 3175 3536 394409287 394409659 1.780000e-104 390.0
30 TraesCS3B01G277800 chr4D 84.302 344 26 10 4934 5255 481970200 481970537 1.420000e-80 311.0
31 TraesCS3B01G277800 chr4D 87.379 103 13 0 1493 1595 475149645 475149543 9.250000e-23 119.0
32 TraesCS3B01G277800 chr4D 82.836 134 18 2 4517 4645 450013683 450013816 1.200000e-21 115.0
33 TraesCS3B01G277800 chr1D 86.464 362 37 6 3175 3529 427426507 427426863 2.300000e-103 387.0
34 TraesCS3B01G277800 chr1D 83.380 361 37 11 3176 3536 345238559 345238896 3.950000e-81 313.0
35 TraesCS3B01G277800 chr1D 78.261 230 42 6 465 693 112625704 112625926 1.970000e-29 141.0
36 TraesCS3B01G277800 chr7A 86.761 355 33 8 3171 3514 617691879 617692230 2.970000e-102 383.0
37 TraesCS3B01G277800 chr7A 94.366 71 3 1 4702 4771 232391375 232391305 2.000000e-19 108.0
38 TraesCS3B01G277800 chr6D 83.407 452 30 13 4702 5112 463616089 463615642 1.380000e-100 377.0
39 TraesCS3B01G277800 chr6D 88.889 198 10 3 5064 5255 470393611 470393420 3.170000e-57 233.0
40 TraesCS3B01G277800 chr6D 94.030 134 7 1 5125 5257 463583650 463583517 8.930000e-48 202.0
41 TraesCS3B01G277800 chr6D 82.119 151 22 2 4500 4645 447243488 447243638 1.990000e-24 124.0
42 TraesCS3B01G277800 chr6D 94.203 69 3 1 4702 4769 448160757 448160825 2.590000e-18 104.0
43 TraesCS3B01G277800 chr7D 87.975 316 25 7 3176 3480 47847423 47847736 1.390000e-95 361.0
44 TraesCS3B01G277800 chr7D 83.082 331 28 11 3174 3479 22860542 22860869 5.190000e-70 276.0
45 TraesCS3B01G277800 chr7D 77.273 374 56 11 3171 3532 606790449 606790093 5.370000e-45 193.0
46 TraesCS3B01G277800 chr2A 86.538 312 20 9 3729 4028 528108499 528108198 1.830000e-84 324.0
47 TraesCS3B01G277800 chr2A 80.617 227 31 4 5033 5257 32374433 32374218 4.210000e-36 163.0
48 TraesCS3B01G277800 chr2A 79.111 225 42 2 465 689 160780737 160780518 3.280000e-32 150.0
49 TraesCS3B01G277800 chr4A 91.204 216 8 1 3174 3378 706659854 706659639 3.100000e-72 283.0
50 TraesCS3B01G277800 chr4A 81.564 179 29 4 483 659 578561730 578561906 1.530000e-30 145.0
51 TraesCS3B01G277800 chr4A 89.320 103 11 0 1493 1595 681906784 681906682 4.270000e-26 130.0
52 TraesCS3B01G277800 chr4A 92.958 71 4 1 4702 4771 473307066 473306996 9.310000e-18 102.0
53 TraesCS3B01G277800 chr5B 83.283 329 27 10 4948 5254 648739765 648739443 1.440000e-70 278.0
54 TraesCS3B01G277800 chr1A 80.546 293 34 9 3261 3537 587804273 587803988 2.480000e-48 204.0
55 TraesCS3B01G277800 chr1A 80.617 227 37 4 465 689 103647410 103647189 9.050000e-38 169.0
56 TraesCS3B01G277800 chr6B 82.511 223 31 4 5033 5254 81648548 81648763 6.950000e-44 189.0
57 TraesCS3B01G277800 chr4B 76.894 264 50 8 432 691 39020188 39019932 7.100000e-29 139.0
58 TraesCS3B01G277800 chr5A 94.366 71 3 1 4702 4771 482683044 482683114 2.000000e-19 108.0
59 TraesCS3B01G277800 chr1B 82.114 123 17 2 4518 4635 564890438 564890316 3.350000e-17 100.0
60 TraesCS3B01G277800 chr1B 81.301 123 17 3 4519 4635 684911318 684911196 1.560000e-15 95.3
61 TraesCS3B01G277800 chr7B 93.878 49 3 0 4932 4980 388162339 388162387 2.030000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G277800 chr3B 447972864 447978120 5256 True 9708 9708 100.000000 1 5257 1 chr3B.!!$R1 5256
1 TraesCS3B01G277800 chr3B 53959053 53959570 517 False 416 416 82.375000 3729 4213 1 chr3B.!!$F1 484
2 TraesCS3B01G277800 chr3D 348149108 348155148 6040 True 2174 5542 91.598000 1 4523 3 chr3D.!!$R5 4522
3 TraesCS3B01G277800 chr3D 125686071 125686633 562 True 590 590 86.087000 4702 5257 1 chr3D.!!$R2 555
4 TraesCS3B01G277800 chr3D 31802636 31803199 563 False 375 375 79.861000 3729 4267 1 chr3D.!!$F1 538
5 TraesCS3B01G277800 chr3A 467095613 467099495 3882 True 1908 3496 94.846333 775 4523 3 chr3A.!!$R1 3748
6 TraesCS3B01G277800 chr3A 141011512 141012164 652 False 481 481 81.297000 4646 5257 1 chr3A.!!$F1 611
7 TraesCS3B01G277800 chr6A 7715498 7716023 525 True 604 604 87.230000 4704 5257 1 chr6A.!!$R1 553
8 TraesCS3B01G277800 chr2D 79528789 79529546 757 True 597 597 82.111000 4536 5257 1 chr2D.!!$R2 721
9 TraesCS3B01G277800 chr2B 165095689 165096547 858 True 292 449 85.727500 4520 5257 2 chr2B.!!$R2 737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 511 0.037326 CACACACGCACATCCTACCT 60.037 55.000 0.00 0.00 0.00 3.08 F
603 606 0.039798 CGACGAAAACGTCTCCTCCA 60.040 55.000 17.92 0.00 36.81 3.86 F
892 2350 1.040339 CCCTCACTCTCCTTCCCTCG 61.040 65.000 0.00 0.00 0.00 4.63 F
1290 2831 1.134818 TCACCGAATCCGTGGATTGAG 60.135 52.381 18.49 11.44 43.98 3.02 F
2990 4577 0.735471 GCAGCCTAGCAAGGTAAAGC 59.265 55.000 0.00 0.00 45.64 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1704 3248 1.110442 CACAGGTGGCAAAAGTTGGA 58.890 50.000 0.0 0.0 0.00 3.53 R
2586 4173 1.569548 TCCTCTACAATCCTCCGGACT 59.430 52.381 0.0 0.0 32.98 3.85 R
2801 4388 6.313744 TGCAAGTTCCTTACTTCTTAAAGC 57.686 37.500 0.0 0.0 45.29 3.51 R
3249 4837 0.320247 GGATGGTATGCAGGCTCTCG 60.320 60.000 0.0 0.0 0.00 4.04 R
4946 6743 0.107831 AAGCTACAACCGGCACTCAA 59.892 50.000 0.0 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.278907 CCAATATTGATATTGCGCCTTTCCA 60.279 40.000 17.23 0.00 45.11 3.53
36 37 2.929641 TGATATTGCGCCTTTCCATCA 58.070 42.857 4.18 2.51 0.00 3.07
38 39 1.024271 TATTGCGCCTTTCCATCAGC 58.976 50.000 4.18 0.00 0.00 4.26
43 44 2.124151 CCTTTCCATCAGCCGGGG 60.124 66.667 2.18 0.00 0.00 5.73
71 72 3.820590 CCACACTGGCGACACAAA 58.179 55.556 0.00 0.00 35.60 2.83
72 73 1.355210 CCACACTGGCGACACAAAC 59.645 57.895 0.00 0.00 35.60 2.93
73 74 1.095228 CCACACTGGCGACACAAACT 61.095 55.000 0.00 0.00 35.60 2.66
75 76 1.937223 CACACTGGCGACACAAACTAA 59.063 47.619 0.00 0.00 35.60 2.24
76 77 1.937899 ACACTGGCGACACAAACTAAC 59.062 47.619 0.00 0.00 35.60 2.34
77 78 1.070843 CACTGGCGACACAAACTAACG 60.071 52.381 0.00 0.00 35.60 3.18
78 79 1.202440 ACTGGCGACACAAACTAACGA 60.202 47.619 0.00 0.00 35.60 3.85
79 80 1.191647 CTGGCGACACAAACTAACGAC 59.808 52.381 0.00 0.00 35.60 4.34
90 91 3.659089 CTAACGACCGTGGGCCAGG 62.659 68.421 19.14 19.14 0.00 4.45
101 102 2.356667 GGCCAGGGGAGGTCAAAG 59.643 66.667 0.00 0.00 32.13 2.77
104 105 1.779061 GCCAGGGGAGGTCAAAGACA 61.779 60.000 0.00 0.00 33.68 3.41
127 128 0.323302 TGACATAAGGCGCCTTCACA 59.677 50.000 43.34 31.40 37.47 3.58
144 145 1.262417 CACATGTATAGCAAGCGCCTG 59.738 52.381 2.29 1.24 39.83 4.85
193 194 8.560355 CCAAATTCTAAAATAACTTTTGGGGG 57.440 34.615 0.00 0.00 36.09 5.40
194 195 8.160765 CCAAATTCTAAAATAACTTTTGGGGGT 58.839 33.333 0.00 0.00 36.09 4.95
199 200 8.873186 TCTAAAATAACTTTTGGGGGTAAGAG 57.127 34.615 0.00 0.00 36.09 2.85
202 203 6.464530 AATAACTTTTGGGGGTAAGAGAGT 57.535 37.500 0.00 0.00 0.00 3.24
205 206 2.426431 TTTGGGGGTAAGAGAGTGGA 57.574 50.000 0.00 0.00 0.00 4.02
226 227 5.015178 TGGATTAAGTTTCTTGGAGGGTCAT 59.985 40.000 0.00 0.00 0.00 3.06
232 233 5.316987 AGTTTCTTGGAGGGTCATTTAGTG 58.683 41.667 0.00 0.00 0.00 2.74
267 268 3.407967 GCATCCGTTCCCCTCCCA 61.408 66.667 0.00 0.00 0.00 4.37
277 278 2.456840 CCCTCCCAACCCCTCTCT 59.543 66.667 0.00 0.00 0.00 3.10
278 279 1.690985 CCCTCCCAACCCCTCTCTC 60.691 68.421 0.00 0.00 0.00 3.20
279 280 1.394151 CCTCCCAACCCCTCTCTCT 59.606 63.158 0.00 0.00 0.00 3.10
280 281 0.637195 CCTCCCAACCCCTCTCTCTA 59.363 60.000 0.00 0.00 0.00 2.43
281 282 1.008449 CCTCCCAACCCCTCTCTCTAA 59.992 57.143 0.00 0.00 0.00 2.10
282 283 2.112190 CTCCCAACCCCTCTCTCTAAC 58.888 57.143 0.00 0.00 0.00 2.34
283 284 1.435563 TCCCAACCCCTCTCTCTAACA 59.564 52.381 0.00 0.00 0.00 2.41
284 285 2.158066 TCCCAACCCCTCTCTCTAACAA 60.158 50.000 0.00 0.00 0.00 2.83
285 286 2.237392 CCCAACCCCTCTCTCTAACAAG 59.763 54.545 0.00 0.00 0.00 3.16
286 287 2.355209 CCAACCCCTCTCTCTAACAAGC 60.355 54.545 0.00 0.00 0.00 4.01
288 289 1.203313 ACCCCTCTCTCTAACAAGCCA 60.203 52.381 0.00 0.00 0.00 4.75
289 290 2.122768 CCCCTCTCTCTAACAAGCCAT 58.877 52.381 0.00 0.00 0.00 4.40
323 325 1.507174 GCTGCTACCGTCGTTCTCT 59.493 57.895 0.00 0.00 0.00 3.10
333 335 0.531974 GTCGTTCTCTTGCCCACACA 60.532 55.000 0.00 0.00 0.00 3.72
335 337 0.249868 CGTTCTCTTGCCCACACAGA 60.250 55.000 0.00 0.00 0.00 3.41
354 356 0.110486 ATGCCCTTCTTGGTGTCGTT 59.890 50.000 0.00 0.00 0.00 3.85
356 358 0.534203 GCCCTTCTTGGTGTCGTTCA 60.534 55.000 0.00 0.00 0.00 3.18
376 378 4.876125 TCATCTCCACTCTTTATCGCATC 58.124 43.478 0.00 0.00 0.00 3.91
387 389 1.633774 TATCGCATCTTCCTCCTCCC 58.366 55.000 0.00 0.00 0.00 4.30
391 393 0.179070 GCATCTTCCTCCTCCCGTTC 60.179 60.000 0.00 0.00 0.00 3.95
405 407 4.113354 CTCCCGTTCCTTCTAATTTCTCG 58.887 47.826 0.00 0.00 0.00 4.04
412 414 3.949754 TCCTTCTAATTTCTCGCGACCTA 59.050 43.478 3.71 0.00 0.00 3.08
473 476 9.926751 CAATCAAAATCACTCATATACACTCAC 57.073 33.333 0.00 0.00 0.00 3.51
474 477 9.896645 AATCAAAATCACTCATATACACTCACT 57.103 29.630 0.00 0.00 0.00 3.41
476 479 8.753133 TCAAAATCACTCATATACACTCACTCT 58.247 33.333 0.00 0.00 0.00 3.24
478 481 8.939201 AAATCACTCATATACACTCACTCTTG 57.061 34.615 0.00 0.00 0.00 3.02
496 499 1.722163 GTGAATGCACGCACACACG 60.722 57.895 14.07 0.00 34.94 4.49
501 504 4.312231 GCACGCACACACGCACAT 62.312 61.111 0.00 0.00 36.19 3.21
508 511 0.037326 CACACACGCACATCCTACCT 60.037 55.000 0.00 0.00 0.00 3.08
518 521 4.372656 GCACATCCTACCTCTATGAACAC 58.627 47.826 0.00 0.00 0.00 3.32
521 524 5.129485 CACATCCTACCTCTATGAACACCTT 59.871 44.000 0.00 0.00 0.00 3.50
522 525 5.364157 ACATCCTACCTCTATGAACACCTTC 59.636 44.000 0.00 0.00 0.00 3.46
523 526 3.952323 TCCTACCTCTATGAACACCTTCG 59.048 47.826 0.00 0.00 0.00 3.79
533 536 2.956333 TGAACACCTTCGAGAGACTGAA 59.044 45.455 0.00 0.00 41.84 3.02
543 546 0.247736 AGAGACTGAACCGGCACATC 59.752 55.000 0.00 0.00 0.00 3.06
546 549 1.009829 GACTGAACCGGCACATCATC 58.990 55.000 0.00 0.00 0.00 2.92
549 552 2.236146 ACTGAACCGGCACATCATCTTA 59.764 45.455 0.00 0.00 0.00 2.10
555 558 3.879295 ACCGGCACATCATCTTAAGATTG 59.121 43.478 15.49 14.26 31.21 2.67
563 566 7.616673 CACATCATCTTAAGATTGACGAAGTC 58.383 38.462 19.47 0.00 45.49 3.01
603 606 0.039798 CGACGAAAACGTCTCCTCCA 60.040 55.000 17.92 0.00 36.81 3.86
614 617 2.608261 CGTCTCCTCCAACTGAACTCAC 60.608 54.545 0.00 0.00 0.00 3.51
617 620 3.648067 TCTCCTCCAACTGAACTCACATT 59.352 43.478 0.00 0.00 0.00 2.71
625 628 5.008217 CCAACTGAACTCACATTACCGAAAA 59.992 40.000 0.00 0.00 0.00 2.29
626 629 5.668558 ACTGAACTCACATTACCGAAAAC 57.331 39.130 0.00 0.00 0.00 2.43
627 630 4.514066 ACTGAACTCACATTACCGAAAACC 59.486 41.667 0.00 0.00 0.00 3.27
628 631 4.452825 TGAACTCACATTACCGAAAACCA 58.547 39.130 0.00 0.00 0.00 3.67
629 632 4.513692 TGAACTCACATTACCGAAAACCAG 59.486 41.667 0.00 0.00 0.00 4.00
631 634 3.071892 ACTCACATTACCGAAAACCAGGA 59.928 43.478 0.00 0.00 0.00 3.86
639 642 8.590204 ACATTACCGAAAACCAGGAAATAAATT 58.410 29.630 0.00 0.00 0.00 1.82
669 672 8.986477 AAAATGTAAGCATCAATGTTAAGTCC 57.014 30.769 0.00 0.00 33.50 3.85
675 678 4.393062 AGCATCAATGTTAAGTCCAAGACG 59.607 41.667 0.00 0.00 37.67 4.18
683 686 5.284079 TGTTAAGTCCAAGACGTGAACTAC 58.716 41.667 0.00 0.00 37.67 2.73
760 793 1.416401 AGCACGTGGAAAGAGAAGGAA 59.584 47.619 18.88 0.00 0.00 3.36
762 795 1.792949 CACGTGGAAAGAGAAGGAACG 59.207 52.381 7.95 0.00 35.78 3.95
892 2350 1.040339 CCCTCACTCTCCTTCCCTCG 61.040 65.000 0.00 0.00 0.00 4.63
1197 2655 1.541368 CTCCACCCTCTTCCCCCAA 60.541 63.158 0.00 0.00 0.00 4.12
1235 2693 1.333636 CGCCCTCACCCTCATTCTCT 61.334 60.000 0.00 0.00 0.00 3.10
1274 2815 4.152580 GCTAGTTGCAGTTTTCTAGTCACC 59.847 45.833 0.00 0.00 42.31 4.02
1290 2831 1.134818 TCACCGAATCCGTGGATTGAG 60.135 52.381 18.49 11.44 43.98 3.02
1325 2866 1.329256 GGGGCGCAGAGAAGTATCTA 58.671 55.000 10.83 0.00 35.54 1.98
1426 2967 7.648142 TGACTTGTTATGATTGTTTGGACTTC 58.352 34.615 0.00 0.00 0.00 3.01
1643 3184 5.807011 CCAAGCCTTAACTGTTATGCAATTC 59.193 40.000 18.70 0.00 0.00 2.17
1938 3499 5.589050 ACTTCAGTTTTGTACCTCTTGGTTC 59.411 40.000 0.00 0.00 46.05 3.62
2183 3761 8.863049 GTTGCCAATGTTAATGAAGTAATCTTG 58.137 33.333 0.00 0.00 33.64 3.02
2324 3909 2.865119 ATCTCACATGGTTGCTGTCA 57.135 45.000 0.00 0.00 0.00 3.58
2354 3941 6.851222 TGAATCTCTTTCAGAACAAGACAC 57.149 37.500 0.00 0.00 39.44 3.67
2478 4065 3.876309 AAGTTACATTGTGGGTCCACT 57.124 42.857 19.44 3.65 46.30 4.00
2519 4106 8.588290 TCTTGGTGTTATTAACTGCCATTATT 57.412 30.769 17.67 0.00 37.14 1.40
2586 4173 4.891168 GGTTCCTTTAAGGGACTGAAACAA 59.109 41.667 20.67 0.00 43.73 2.83
2941 4528 6.388619 AAGAAGCCCAATACTAAGGAGAAA 57.611 37.500 0.00 0.00 0.00 2.52
2990 4577 0.735471 GCAGCCTAGCAAGGTAAAGC 59.265 55.000 0.00 0.00 45.64 3.51
3080 4667 7.523293 TCATTCATGACTTGTTATGTGGTTT 57.477 32.000 0.00 0.00 0.00 3.27
3099 4686 2.358737 CGGTCTTGTCCTGCACCC 60.359 66.667 0.00 0.00 0.00 4.61
3236 4824 3.712907 GCCACCTCCCCTGCGTTA 61.713 66.667 0.00 0.00 0.00 3.18
3249 4837 2.664436 GCGTTACACGTGTCCCAGC 61.664 63.158 27.16 21.39 44.73 4.85
3347 4935 2.612212 AGTGGTCTACGTTTTGCAACAG 59.388 45.455 0.00 0.00 32.54 3.16
3363 4951 3.242739 GCAACAGAACTTCTCTTGCGAAA 60.243 43.478 13.86 0.00 38.31 3.46
3383 4971 5.519927 CGAAATTTTTCTGCAACAAGACCTT 59.480 36.000 0.00 0.00 35.07 3.50
3488 5077 5.858049 CACGACATGTGTTGCAGAAATAATT 59.142 36.000 1.15 0.00 43.88 1.40
3548 5137 3.416382 GCTTGGGCGAACGCGTAA 61.416 61.111 14.46 0.00 43.06 3.18
3593 5206 6.153340 AGTGAAGCAAAACATGTAGGCAATAT 59.847 34.615 15.81 2.77 0.00 1.28
3687 5301 8.223100 GTGAAACCATTGCTTAATTTGTCAATC 58.777 33.333 0.00 0.00 0.00 2.67
3956 5579 4.029520 ACTGCTGGTCTATCTGAATCTGT 58.970 43.478 0.00 0.00 0.00 3.41
4019 5647 4.761975 TCCTTAAAGGTACATAGCCGTTG 58.238 43.478 0.00 0.00 36.53 4.10
4307 5971 4.689612 TTCAAGTAGTTGAACTCCTGCT 57.310 40.909 19.59 0.00 45.82 4.24
4393 6057 4.036262 TGGTGAACATTGTAGTCTGTTTGC 59.964 41.667 0.00 0.00 35.80 3.68
4457 6121 2.833794 TGCATATTCCACGGCTTCTAC 58.166 47.619 0.00 0.00 0.00 2.59
4458 6122 2.169561 TGCATATTCCACGGCTTCTACA 59.830 45.455 0.00 0.00 0.00 2.74
4459 6123 2.802816 GCATATTCCACGGCTTCTACAG 59.197 50.000 0.00 0.00 0.00 2.74
4460 6124 3.741388 GCATATTCCACGGCTTCTACAGT 60.741 47.826 0.00 0.00 0.00 3.55
4461 6125 4.500887 GCATATTCCACGGCTTCTACAGTA 60.501 45.833 0.00 0.00 0.00 2.74
4491 6155 1.098869 TCAGATCCGTCAGCAGTCTC 58.901 55.000 0.00 0.00 0.00 3.36
4494 6158 1.748493 AGATCCGTCAGCAGTCTCTTC 59.252 52.381 0.00 0.00 0.00 2.87
4529 6198 5.368145 CAGTTAATGATAAGGCCAGCACTA 58.632 41.667 5.01 0.00 0.00 2.74
4606 6280 4.933064 GAGGCCGTCCGATCGCAG 62.933 72.222 10.32 2.56 37.47 5.18
4635 6309 9.961264 CCTCTTCTACCTTTTTCTTACCTTATT 57.039 33.333 0.00 0.00 0.00 1.40
4640 6314 9.856162 TCTACCTTTTTCTTACCTTATTGTTGT 57.144 29.630 0.00 0.00 0.00 3.32
4669 6403 4.820744 GGGCCACCATGGATGCGT 62.821 66.667 21.47 0.00 40.96 5.24
4897 6689 1.228533 CCCATGGTTGCAGCAAAAAC 58.771 50.000 10.11 4.08 0.00 2.43
4902 6695 1.761784 TGGTTGCAGCAAAAACCTCAT 59.238 42.857 10.11 0.00 45.12 2.90
4968 6765 0.949105 AGTGCCGGTTGTAGCTTTCG 60.949 55.000 1.90 0.00 0.00 3.46
4980 6777 1.370051 GCTTTCGTGTTGCCGGTTC 60.370 57.895 1.90 0.00 0.00 3.62
5105 6947 1.882311 GCCATCACCGATGCAACAA 59.118 52.632 0.00 0.00 38.59 2.83
5106 6948 0.243365 GCCATCACCGATGCAACAAA 59.757 50.000 0.00 0.00 38.59 2.83
5107 6949 1.336702 GCCATCACCGATGCAACAAAA 60.337 47.619 0.00 0.00 38.59 2.44
5108 6950 2.865670 GCCATCACCGATGCAACAAAAA 60.866 45.455 0.00 0.00 38.59 1.94
5109 6951 3.587923 CCATCACCGATGCAACAAAAAT 58.412 40.909 0.00 0.00 38.59 1.82
5110 6952 3.368539 CCATCACCGATGCAACAAAAATG 59.631 43.478 0.00 0.00 38.59 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.681025 GGCGCAATATCAATATTGGTTGTG 59.319 41.667 23.35 23.35 46.03 3.33
9 10 5.163513 GGAAAGGCGCAATATCAATATTGG 58.836 41.667 19.32 12.65 46.03 3.16
15 16 3.286353 TGATGGAAAGGCGCAATATCAA 58.714 40.909 10.83 0.00 0.00 2.57
22 23 2.751436 GGCTGATGGAAAGGCGCA 60.751 61.111 10.83 0.00 0.00 6.09
33 34 1.224592 CTTACTTGCCCCGGCTGAT 59.775 57.895 7.35 0.00 42.51 2.90
36 37 2.351276 CACTTACTTGCCCCGGCT 59.649 61.111 7.35 0.00 42.51 5.52
43 44 0.593128 CCAGTGTGGCACTTACTTGC 59.407 55.000 19.83 0.70 42.59 4.01
68 69 1.571215 GGCCCACGGTCGTTAGTTTG 61.571 60.000 0.00 0.00 0.00 2.93
71 72 2.918802 TGGCCCACGGTCGTTAGT 60.919 61.111 0.00 0.00 0.00 2.24
72 73 2.125673 CTGGCCCACGGTCGTTAG 60.126 66.667 0.00 0.00 0.00 2.34
73 74 3.697747 CCTGGCCCACGGTCGTTA 61.698 66.667 0.00 0.00 0.00 3.18
90 91 1.420138 TCAAGGTGTCTTTGACCTCCC 59.580 52.381 0.00 0.00 43.42 4.30
101 102 0.727398 GCGCCTTATGTCAAGGTGTC 59.273 55.000 15.81 6.80 46.74 3.67
104 105 0.328258 AAGGCGCCTTATGTCAAGGT 59.672 50.000 39.65 12.55 39.60 3.50
127 128 2.420642 CATCAGGCGCTTGCTATACAT 58.579 47.619 15.68 0.00 39.13 2.29
144 145 2.689983 CCCTCATTTGCACCTAACCATC 59.310 50.000 0.00 0.00 0.00 3.51
193 194 8.095169 TCCAAGAAACTTAATCCACTCTCTTAC 58.905 37.037 0.00 0.00 0.00 2.34
194 195 8.202461 TCCAAGAAACTTAATCCACTCTCTTA 57.798 34.615 0.00 0.00 0.00 2.10
196 197 6.296145 CCTCCAAGAAACTTAATCCACTCTCT 60.296 42.308 0.00 0.00 0.00 3.10
197 198 5.877564 CCTCCAAGAAACTTAATCCACTCTC 59.122 44.000 0.00 0.00 0.00 3.20
199 200 4.944317 CCCTCCAAGAAACTTAATCCACTC 59.056 45.833 0.00 0.00 0.00 3.51
202 203 4.352595 TGACCCTCCAAGAAACTTAATCCA 59.647 41.667 0.00 0.00 0.00 3.41
205 206 8.170730 ACTAAATGACCCTCCAAGAAACTTAAT 58.829 33.333 0.00 0.00 0.00 1.40
226 227 7.553402 TGCGGCCTAGTATTTATTTTCACTAAA 59.447 33.333 0.00 0.00 0.00 1.85
232 233 5.390567 CGGATGCGGCCTAGTATTTATTTTC 60.391 44.000 0.00 0.00 0.00 2.29
267 268 1.909986 GGCTTGTTAGAGAGAGGGGTT 59.090 52.381 0.00 0.00 0.00 4.11
277 278 1.742411 GCGCACCTATGGCTTGTTAGA 60.742 52.381 0.30 0.00 0.00 2.10
278 279 0.657840 GCGCACCTATGGCTTGTTAG 59.342 55.000 0.30 0.00 0.00 2.34
279 280 0.746563 GGCGCACCTATGGCTTGTTA 60.747 55.000 10.83 0.00 0.00 2.41
280 281 2.046285 GGCGCACCTATGGCTTGTT 61.046 57.895 10.83 0.00 0.00 2.83
281 282 2.438434 GGCGCACCTATGGCTTGT 60.438 61.111 10.83 0.00 0.00 3.16
313 315 1.300620 TGTGGGCAAGAGAACGACG 60.301 57.895 0.00 0.00 0.00 5.12
317 319 1.808945 CATCTGTGTGGGCAAGAGAAC 59.191 52.381 0.00 0.00 0.00 3.01
323 325 2.283101 GGGCATCTGTGTGGGCAA 60.283 61.111 0.00 0.00 0.00 4.52
333 335 0.036010 CGACACCAAGAAGGGCATCT 60.036 55.000 0.00 0.00 43.89 2.90
335 337 0.110486 AACGACACCAAGAAGGGCAT 59.890 50.000 0.00 0.00 43.89 4.40
354 356 4.586421 AGATGCGATAAAGAGTGGAGATGA 59.414 41.667 0.00 0.00 0.00 2.92
356 358 5.510520 GGAAGATGCGATAAAGAGTGGAGAT 60.511 44.000 0.00 0.00 0.00 2.75
376 378 0.537653 GAAGGAACGGGAGGAGGAAG 59.462 60.000 0.00 0.00 0.00 3.46
387 389 3.000971 GTCGCGAGAAATTAGAAGGAACG 60.001 47.826 10.24 0.00 45.01 3.95
391 393 3.166489 AGGTCGCGAGAAATTAGAAGG 57.834 47.619 10.24 0.00 45.01 3.46
451 454 8.939201 AGAGTGAGTGTATATGAGTGATTTTG 57.061 34.615 0.00 0.00 0.00 2.44
455 458 7.652524 ACAAGAGTGAGTGTATATGAGTGAT 57.347 36.000 0.00 0.00 0.00 3.06
473 476 0.587768 TGTGCGTGCATTCACAAGAG 59.412 50.000 17.89 0.00 43.28 2.85
474 477 0.307453 GTGTGCGTGCATTCACAAGA 59.693 50.000 20.65 1.82 43.78 3.02
476 479 0.248417 GTGTGTGCGTGCATTCACAA 60.248 50.000 20.65 11.47 43.78 3.33
478 481 1.722163 CGTGTGTGCGTGCATTCAC 60.722 57.895 16.58 16.58 39.78 3.18
487 490 1.736282 TAGGATGTGCGTGTGTGCG 60.736 57.895 0.00 0.00 37.81 5.34
489 492 0.037326 AGGTAGGATGTGCGTGTGTG 60.037 55.000 0.00 0.00 0.00 3.82
491 494 0.532573 AGAGGTAGGATGTGCGTGTG 59.467 55.000 0.00 0.00 0.00 3.82
492 495 2.139323 TAGAGGTAGGATGTGCGTGT 57.861 50.000 0.00 0.00 0.00 4.49
496 499 4.372656 GTGTTCATAGAGGTAGGATGTGC 58.627 47.826 0.00 0.00 0.00 4.57
501 504 3.952323 CGAAGGTGTTCATAGAGGTAGGA 59.048 47.826 0.00 0.00 32.36 2.94
508 511 4.396478 CAGTCTCTCGAAGGTGTTCATAGA 59.604 45.833 0.00 0.00 32.36 1.98
518 521 0.171455 CCGGTTCAGTCTCTCGAAGG 59.829 60.000 0.00 0.00 0.00 3.46
521 524 1.602605 TGCCGGTTCAGTCTCTCGA 60.603 57.895 1.90 0.00 0.00 4.04
522 525 1.444553 GTGCCGGTTCAGTCTCTCG 60.445 63.158 1.90 0.00 0.00 4.04
523 526 0.247736 ATGTGCCGGTTCAGTCTCTC 59.752 55.000 1.90 0.00 0.00 3.20
533 536 3.845781 ATCTTAAGATGATGTGCCGGT 57.154 42.857 17.26 0.00 32.68 5.28
565 568 2.110990 CGACTACGAAAACGTGTGTGA 58.889 47.619 5.54 0.00 42.66 3.58
589 592 3.118371 AGTTCAGTTGGAGGAGACGTTTT 60.118 43.478 0.00 0.00 0.00 2.43
592 595 1.614413 GAGTTCAGTTGGAGGAGACGT 59.386 52.381 0.00 0.00 0.00 4.34
593 596 1.613925 TGAGTTCAGTTGGAGGAGACG 59.386 52.381 0.00 0.00 0.00 4.18
594 597 2.365617 TGTGAGTTCAGTTGGAGGAGAC 59.634 50.000 0.00 0.00 0.00 3.36
595 598 2.677914 TGTGAGTTCAGTTGGAGGAGA 58.322 47.619 0.00 0.00 0.00 3.71
603 606 5.008316 GGTTTTCGGTAATGTGAGTTCAGTT 59.992 40.000 0.00 0.00 0.00 3.16
614 617 8.996024 AATTTATTTCCTGGTTTTCGGTAATG 57.004 30.769 0.00 0.00 0.00 1.90
617 620 7.666388 TCTGAATTTATTTCCTGGTTTTCGGTA 59.334 33.333 0.00 0.00 33.04 4.02
650 653 6.092122 CGTCTTGGACTTAACATTGATGCTTA 59.908 38.462 0.00 0.00 0.00 3.09
656 659 4.951254 TCACGTCTTGGACTTAACATTGA 58.049 39.130 0.00 0.00 0.00 2.57
675 678 0.320160 GGTGGTCCACCGTAGTTCAC 60.320 60.000 25.42 0.00 44.95 3.18
760 793 4.023963 CACTGATGTCTGATATACGTCCGT 60.024 45.833 0.00 0.00 32.58 4.69
762 795 5.440234 ACACTGATGTCTGATATACGTCC 57.560 43.478 0.00 0.00 31.55 4.79
1259 2800 3.612860 CGGATTCGGTGACTAGAAAACTG 59.387 47.826 0.00 0.00 0.00 3.16
1274 2815 1.490693 CGCCTCAATCCACGGATTCG 61.491 60.000 8.39 5.88 42.30 3.34
1290 2831 2.028925 CCCAAACAACAAGCCGCC 59.971 61.111 0.00 0.00 0.00 6.13
1325 2866 1.826024 GATCGGCCATGTCTCCTGT 59.174 57.895 2.24 0.00 0.00 4.00
1426 2967 7.328737 ACACTACTTAAGATTAAGAACACTGCG 59.671 37.037 17.10 2.68 42.05 5.18
1704 3248 1.110442 CACAGGTGGCAAAAGTTGGA 58.890 50.000 0.00 0.00 0.00 3.53
1938 3499 3.641437 TCAAAGCAATCCCTTCAAACG 57.359 42.857 0.00 0.00 0.00 3.60
2018 3579 6.347563 CGTCATTTTACTTTTGGCAATGCAAT 60.348 34.615 7.79 0.00 0.00 3.56
2183 3761 9.774742 CATCCAAAAATAGTTTACTGAAGCTAC 57.225 33.333 0.00 0.00 31.96 3.58
2188 3766 9.974980 GAAACCATCCAAAAATAGTTTACTGAA 57.025 29.630 0.00 0.00 0.00 3.02
2354 3941 9.634163 GTAACATAAAACATGTTAAGAAAGGGG 57.366 33.333 12.39 0.00 43.50 4.79
2478 4065 5.071788 ACACCAAGATACAGAGTTGAAGGAA 59.928 40.000 0.00 0.00 0.00 3.36
2519 4106 5.394005 CCCTTTCATGATGGAAAATACGCAA 60.394 40.000 14.65 0.00 36.42 4.85
2586 4173 1.569548 TCCTCTACAATCCTCCGGACT 59.430 52.381 0.00 0.00 32.98 3.85
2594 4181 7.283127 TGTTCTTTATGCAATCCTCTACAATCC 59.717 37.037 0.00 0.00 0.00 3.01
2710 4297 6.817140 AGGAGTTCCTGCTTAGTTTAATAACG 59.183 38.462 0.00 0.00 46.55 3.18
2801 4388 6.313744 TGCAAGTTCCTTACTTCTTAAAGC 57.686 37.500 0.00 0.00 45.29 3.51
2941 4528 3.243602 GCGGAAAGGGTGTGTATTGTTTT 60.244 43.478 0.00 0.00 0.00 2.43
2990 4577 6.907206 ACAATGAGTGAAACAAACAATTGG 57.093 33.333 10.83 0.00 41.43 3.16
3080 4667 2.280797 GTGCAGGACAAGACCGCA 60.281 61.111 0.00 0.00 37.22 5.69
3099 4686 4.815308 AGCTGCTGATGCTATTAAGACAAG 59.185 41.667 0.00 0.00 39.21 3.16
3233 4821 1.007038 TCGCTGGGACACGTGTAAC 60.007 57.895 23.44 17.58 35.21 2.50
3236 4824 2.910479 TCTCGCTGGGACACGTGT 60.910 61.111 23.64 23.64 35.21 4.49
3249 4837 0.320247 GGATGGTATGCAGGCTCTCG 60.320 60.000 0.00 0.00 0.00 4.04
3257 4845 3.006940 GTTCGACAAAGGATGGTATGCA 58.993 45.455 0.00 0.00 0.00 3.96
3327 4915 2.610374 TCTGTTGCAAAACGTAGACCAC 59.390 45.455 0.00 0.00 0.00 4.16
3328 4916 2.907634 TCTGTTGCAAAACGTAGACCA 58.092 42.857 0.00 0.00 0.00 4.02
3363 4951 4.162131 ACCAAGGTCTTGTTGCAGAAAAAT 59.838 37.500 9.51 0.00 38.85 1.82
3425 5014 4.435386 GCAACAGTTGTTTTGTCGCATTTT 60.435 37.500 14.88 0.00 35.83 1.82
3455 5044 2.753989 CACATGTCGTGTTGCAGAAA 57.246 45.000 0.00 0.00 39.62 2.52
3466 5055 6.317088 AGAATTATTTCTGCAACACATGTCG 58.683 36.000 0.00 0.00 40.74 4.35
3480 5069 6.470235 CACGGATCTTGTTGCAGAATTATTTC 59.530 38.462 0.00 0.00 0.00 2.17
3488 5077 1.872952 CAACACGGATCTTGTTGCAGA 59.127 47.619 20.55 0.00 45.36 4.26
3502 5091 2.650196 CCCCACCATTGCAACACG 59.350 61.111 0.00 0.00 0.00 4.49
3544 5133 3.768468 ATTTAAATGGGGCGTGTTACG 57.232 42.857 0.00 0.00 45.88 3.18
3545 5134 5.471257 TCAAATTTAAATGGGGCGTGTTAC 58.529 37.500 0.39 0.00 0.00 2.50
3547 5136 4.039852 ACTCAAATTTAAATGGGGCGTGTT 59.960 37.500 0.39 0.00 0.00 3.32
3548 5137 3.576550 ACTCAAATTTAAATGGGGCGTGT 59.423 39.130 0.39 0.00 0.00 4.49
3619 5233 4.687483 CCAGCAGAAATGAACATTTGGAAC 59.313 41.667 15.92 3.72 40.77 3.62
3621 5235 4.151121 TCCAGCAGAAATGAACATTTGGA 58.849 39.130 15.92 13.44 40.77 3.53
3622 5236 4.524316 TCCAGCAGAAATGAACATTTGG 57.476 40.909 15.92 11.66 40.77 3.28
3623 5237 6.860080 ACTATCCAGCAGAAATGAACATTTG 58.140 36.000 15.92 6.26 40.77 2.32
3687 5301 6.482641 CCAGTTCAAGATCAATCTACATCCAG 59.517 42.308 0.00 0.00 35.76 3.86
3956 5579 5.361427 TCTCGTTGTCATTGGTACTTTTGA 58.639 37.500 0.00 0.00 0.00 2.69
4019 5647 7.536281 AGTTTAAAAGAACAGACACGAAACAAC 59.464 33.333 0.00 0.00 31.94 3.32
4076 5724 4.082190 GTGGACTAACAGCACATACTCTCA 60.082 45.833 0.00 0.00 0.00 3.27
4120 5768 8.477256 CCTTTTTCTGCAAATAGGGAATAATGA 58.523 33.333 0.90 0.00 37.17 2.57
4213 5862 5.456265 GCTTCTTTTTGGAGTGTGATTCTC 58.544 41.667 0.00 0.00 0.00 2.87
4307 5971 7.004555 TGAAGCTTGAAGACCTACTTGAATA 57.995 36.000 2.10 0.00 39.13 1.75
4457 6121 7.706607 TGACGGATCTGATCTTGTAAATTACTG 59.293 37.037 16.61 0.00 0.00 2.74
4458 6122 7.782049 TGACGGATCTGATCTTGTAAATTACT 58.218 34.615 16.61 0.00 0.00 2.24
4459 6123 7.306866 GCTGACGGATCTGATCTTGTAAATTAC 60.307 40.741 16.61 0.00 0.00 1.89
4460 6124 6.701841 GCTGACGGATCTGATCTTGTAAATTA 59.298 38.462 16.61 2.46 0.00 1.40
4461 6125 5.525378 GCTGACGGATCTGATCTTGTAAATT 59.475 40.000 16.61 0.00 0.00 1.82
4491 6155 7.137490 TCATTAACTGCTCATGTTTCTGAAG 57.863 36.000 0.00 0.00 0.00 3.02
4494 6158 8.127327 CCTTATCATTAACTGCTCATGTTTCTG 58.873 37.037 0.00 0.00 0.00 3.02
4598 6272 0.947960 TAGAAGAGGAGCTGCGATCG 59.052 55.000 11.69 11.69 0.00 3.69
4606 6280 5.875910 GGTAAGAAAAAGGTAGAAGAGGAGC 59.124 44.000 0.00 0.00 0.00 4.70
4635 6309 2.452116 CCTGACTGGGGAGACAACA 58.548 57.895 0.00 0.00 0.00 3.33
4657 6391 1.377202 GTGGTCACGCATCCATGGT 60.377 57.895 12.58 0.00 36.09 3.55
4718 6491 4.641645 CCAGTGCTCCAACCGGCA 62.642 66.667 0.00 0.00 36.01 5.69
4794 6586 4.358841 CGGCATTGGGGGTGGTCA 62.359 66.667 0.00 0.00 0.00 4.02
4833 6625 0.112995 AGGAACAAGGATGGCAAGCA 59.887 50.000 0.00 0.00 0.00 3.91
4837 6629 2.673775 TTTCAGGAACAAGGATGGCA 57.326 45.000 0.00 0.00 0.00 4.92
4897 6689 2.825836 GCTTCCACCGGCATGAGG 60.826 66.667 0.00 0.69 0.00 3.86
4946 6743 0.107831 AAGCTACAACCGGCACTCAA 59.892 50.000 0.00 0.00 0.00 3.02
4968 6765 0.179124 TTTGCTTGAACCGGCAACAC 60.179 50.000 0.00 0.00 46.14 3.32
5105 6947 3.866883 ACCGGCGATCATTTTCATTTT 57.133 38.095 9.30 0.00 0.00 1.82
5106 6948 3.945285 ACTACCGGCGATCATTTTCATTT 59.055 39.130 9.30 0.00 0.00 2.32
5107 6949 3.541632 ACTACCGGCGATCATTTTCATT 58.458 40.909 9.30 0.00 0.00 2.57
5108 6950 3.194005 ACTACCGGCGATCATTTTCAT 57.806 42.857 9.30 0.00 0.00 2.57
5109 6951 2.684001 ACTACCGGCGATCATTTTCA 57.316 45.000 9.30 0.00 0.00 2.69
5110 6952 2.475487 GCTACTACCGGCGATCATTTTC 59.525 50.000 9.30 0.00 0.00 2.29
5164 7009 2.119029 TCATGGCGAGACGACGGAT 61.119 57.895 0.00 0.00 37.93 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.