Multiple sequence alignment - TraesCS3B01G277200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G277200 chr3B 100.000 5151 0 0 1 5151 447228183 447233333 0.000000e+00 9513.0
1 TraesCS3B01G277200 chr3B 90.789 76 6 1 678 753 447211085 447211159 3.280000e-17 100.0
2 TraesCS3B01G277200 chr3B 100.000 33 0 0 1205 1237 187352304 187352336 1.550000e-05 62.1
3 TraesCS3B01G277200 chr3B 94.595 37 2 0 4984 5020 810175368 810175332 2.000000e-04 58.4
4 TraesCS3B01G277200 chr3D 95.522 1764 40 11 657 2391 347414189 347415942 0.000000e+00 2784.0
5 TraesCS3B01G277200 chr3D 93.494 1076 51 11 2439 3498 347415939 347417011 0.000000e+00 1581.0
6 TraesCS3B01G277200 chr3D 94.632 950 43 6 3713 4657 347417040 347417986 0.000000e+00 1465.0
7 TraesCS3B01G277200 chr3D 87.280 511 42 16 4653 5151 347445595 347446094 3.480000e-156 562.0
8 TraesCS3B01G277200 chr3D 100.000 33 0 0 1205 1237 130933251 130933283 1.550000e-05 62.1
9 TraesCS3B01G277200 chr3A 94.002 1317 46 10 1101 2394 466574548 466575854 0.000000e+00 1964.0
10 TraesCS3B01G277200 chr3A 92.322 1094 52 14 2419 3496 466575852 466576929 0.000000e+00 1526.0
11 TraesCS3B01G277200 chr3A 93.981 864 44 5 3713 4572 466576960 466577819 0.000000e+00 1301.0
12 TraesCS3B01G277200 chr3A 95.000 320 8 3 657 970 466573720 466574037 3.580000e-136 496.0
13 TraesCS3B01G277200 chr3A 86.687 323 33 6 831 1153 466567387 466567699 2.950000e-92 350.0
14 TraesCS3B01G277200 chr3A 95.763 118 5 0 3502 3619 65345866 65345749 1.890000e-44 191.0
15 TraesCS3B01G277200 chr3A 95.763 118 5 0 3498 3615 427104320 427104437 1.890000e-44 191.0
16 TraesCS3B01G277200 chr3A 80.952 273 21 16 4910 5151 466578972 466579244 2.450000e-43 187.0
17 TraesCS3B01G277200 chr3A 88.079 151 11 4 3502 3652 19299540 19299683 6.860000e-39 172.0
18 TraesCS3B01G277200 chr3A 97.938 97 2 0 3620 3716 630924332 630924428 8.870000e-38 169.0
19 TraesCS3B01G277200 chr3A 93.578 109 7 0 3620 3728 65345851 65345743 4.130000e-36 163.0
20 TraesCS3B01G277200 chr3A 95.960 99 4 0 3620 3718 427104339 427104437 1.480000e-35 161.0
21 TraesCS3B01G277200 chr3A 100.000 33 0 0 1205 1237 142896842 142896874 1.550000e-05 62.1
22 TraesCS3B01G277200 chr2B 96.499 657 20 3 1 656 359068706 359069360 0.000000e+00 1083.0
23 TraesCS3B01G277200 chr2B 85.992 257 28 6 401 656 751176565 751176814 8.500000e-68 268.0
24 TraesCS3B01G277200 chr2B 92.727 110 7 1 3620 3729 171460066 171459958 1.920000e-34 158.0
25 TraesCS3B01G277200 chr1B 95.434 657 27 3 1 656 109427077 109427731 0.000000e+00 1044.0
26 TraesCS3B01G277200 chr1B 90.780 141 11 2 3502 3640 533752140 533752000 2.450000e-43 187.0
27 TraesCS3B01G277200 chr1B 96.000 100 4 0 3620 3719 457004008 457004107 4.130000e-36 163.0
28 TraesCS3B01G277200 chr7B 94.777 651 31 3 7 656 121869356 121868708 0.000000e+00 1011.0
29 TraesCS3B01G277200 chr7B 92.366 655 37 9 4 656 551495816 551495173 0.000000e+00 920.0
30 TraesCS3B01G277200 chrUn 95.168 476 14 4 190 665 380100004 380100470 0.000000e+00 743.0
31 TraesCS3B01G277200 chrUn 96.774 186 6 0 1 186 321454567 321454752 1.390000e-80 311.0
32 TraesCS3B01G277200 chrUn 96.774 186 6 0 1 186 357695194 357695379 1.390000e-80 311.0
33 TraesCS3B01G277200 chr6D 86.398 669 63 23 7 656 8675847 8676506 0.000000e+00 706.0
34 TraesCS3B01G277200 chr6D 89.437 142 13 2 3488 3628 455247243 455247103 1.470000e-40 178.0
35 TraesCS3B01G277200 chr2D 83.438 634 76 17 2 624 593354581 593355196 3.480000e-156 562.0
36 TraesCS3B01G277200 chr2D 79.759 415 62 17 2 401 317939642 317940049 1.090000e-71 281.0
37 TraesCS3B01G277200 chr2D 94.444 36 2 0 4985 5020 386707083 386707048 7.210000e-04 56.5
38 TraesCS3B01G277200 chr1D 86.207 377 33 11 3135 3496 479728139 479728511 1.740000e-104 390.0
39 TraesCS3B01G277200 chr4A 96.774 186 6 0 1 186 698102088 698101903 1.390000e-80 311.0
40 TraesCS3B01G277200 chr7A 86.400 250 28 5 408 656 645077272 645077028 8.500000e-68 268.0
41 TraesCS3B01G277200 chr4B 95.902 122 5 0 3491 3612 351634701 351634822 1.130000e-46 198.0
42 TraesCS3B01G277200 chr7D 94.355 124 6 1 3498 3620 280404819 280404942 6.810000e-44 189.0
43 TraesCS3B01G277200 chr7D 96.907 97 3 0 3620 3716 227507136 227507232 4.130000e-36 163.0
44 TraesCS3B01G277200 chr7D 94.286 105 5 1 3620 3723 280404838 280404942 5.340000e-35 159.0
45 TraesCS3B01G277200 chr5B 94.167 120 6 1 3492 3611 704168350 704168232 1.140000e-41 182.0
46 TraesCS3B01G277200 chr5B 80.531 226 26 8 3501 3715 9228999 9229217 1.920000e-34 158.0
47 TraesCS3B01G277200 chr2A 97.895 95 2 0 3620 3714 685627237 685627331 1.150000e-36 165.0
48 TraesCS3B01G277200 chr6A 100.000 28 0 0 2513 2540 563726767 563726794 9.000000e-03 52.8
49 TraesCS3B01G277200 chr5A 100.000 28 0 0 1787 1814 526394026 526394053 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G277200 chr3B 447228183 447233333 5150 False 9513.000000 9513 100.000000 1 5151 1 chr3B.!!$F3 5150
1 TraesCS3B01G277200 chr3D 347414189 347417986 3797 False 1943.333333 2784 94.549333 657 4657 3 chr3D.!!$F3 4000
2 TraesCS3B01G277200 chr3A 466573720 466579244 5524 False 1094.800000 1964 91.251400 657 5151 5 chr3A.!!$F6 4494
3 TraesCS3B01G277200 chr2B 359068706 359069360 654 False 1083.000000 1083 96.499000 1 656 1 chr2B.!!$F1 655
4 TraesCS3B01G277200 chr1B 109427077 109427731 654 False 1044.000000 1044 95.434000 1 656 1 chr1B.!!$F1 655
5 TraesCS3B01G277200 chr7B 121868708 121869356 648 True 1011.000000 1011 94.777000 7 656 1 chr7B.!!$R1 649
6 TraesCS3B01G277200 chr7B 551495173 551495816 643 True 920.000000 920 92.366000 4 656 1 chr7B.!!$R2 652
7 TraesCS3B01G277200 chr6D 8675847 8676506 659 False 706.000000 706 86.398000 7 656 1 chr6D.!!$F1 649
8 TraesCS3B01G277200 chr2D 593354581 593355196 615 False 562.000000 562 83.438000 2 624 1 chr2D.!!$F2 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 85 1.444836 CGTCAACGGGCATTTAAGGA 58.555 50.000 0.00 0.00 35.37 3.36 F
1165 1594 1.209504 GGGGTCTCGATTTGGATGTGA 59.790 52.381 0.00 0.00 0.00 3.58 F
1716 2159 0.111061 TTGCAGGTGAGTGGAATGCT 59.889 50.000 0.00 0.00 37.76 3.79 F
3516 3975 0.107017 TAGGTACTCCCTCCGTTCGG 60.107 60.000 4.74 4.74 44.81 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1251 1683 0.033601 ACCAAATGCGGCCCATTAGA 60.034 50.0 16.77 0.00 43.22 2.10 R
2421 2864 0.178964 TCCTTTTTGCTGTGGGGGAG 60.179 55.0 0.00 0.00 0.00 4.30 R
3590 4049 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R
4323 4783 0.249238 GGCTGCTCATCAGTACTCCG 60.249 60.0 0.00 0.00 44.66 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 85 1.444836 CGTCAACGGGCATTTAAGGA 58.555 50.000 0.00 0.00 35.37 3.36
101 106 2.974041 TTGGATTTAGGGCGCCGGT 61.974 57.895 22.54 13.24 0.00 5.28
535 564 2.493278 CCATTTGTCCGCTCCTGATTTT 59.507 45.455 0.00 0.00 0.00 1.82
586 615 9.753674 TTTTAAGTTTATGGATGAGTTGATCCT 57.246 29.630 0.00 0.00 42.36 3.24
587 616 9.753674 TTTAAGTTTATGGATGAGTTGATCCTT 57.246 29.630 0.00 0.00 42.36 3.36
625 654 4.949856 GGACTAAACCATCACATCCAATGT 59.050 41.667 0.00 0.00 46.22 2.71
640 669 4.798882 TCCAATGTAAGTTTGTGGGTCTT 58.201 39.130 0.00 0.00 0.00 3.01
1073 1110 2.634100 GGTAAGCCCATTCCCTCCT 58.366 57.895 0.00 0.00 0.00 3.69
1078 1115 3.171388 CCCATTCCCTCCTCCCCG 61.171 72.222 0.00 0.00 0.00 5.73
1079 1116 3.171388 CCATTCCCTCCTCCCCGG 61.171 72.222 0.00 0.00 0.00 5.73
1080 1117 2.040884 CATTCCCTCCTCCCCGGA 60.041 66.667 0.73 0.00 40.30 5.14
1081 1118 1.462238 CATTCCCTCCTCCCCGGAT 60.462 63.158 0.73 0.00 42.12 4.18
1140 1557 5.907866 TTTCAGTTTTTCTCTTTCGGGTT 57.092 34.783 0.00 0.00 0.00 4.11
1149 1566 3.104568 TTTCGGGTTGGTGGGGGT 61.105 61.111 0.00 0.00 0.00 4.95
1165 1594 1.209504 GGGGTCTCGATTTGGATGTGA 59.790 52.381 0.00 0.00 0.00 3.58
1169 1598 2.349886 GTCTCGATTTGGATGTGACTGC 59.650 50.000 0.00 0.00 0.00 4.40
1225 1657 2.504244 GTCGGGAAGACGTCGCTG 60.504 66.667 10.46 4.26 40.43 5.18
1243 1675 3.305676 CGCTGATGAACCAGTATCCTAGG 60.306 52.174 0.82 0.82 36.57 3.02
1244 1676 3.556004 GCTGATGAACCAGTATCCTAGGC 60.556 52.174 2.96 0.00 36.57 3.93
1269 1701 0.670162 CTCTAATGGGCCGCATTTGG 59.330 55.000 20.22 14.69 0.00 3.28
1328 1760 4.848299 GCTCTGCTGTATTTTTCTCGTTTG 59.152 41.667 0.00 0.00 0.00 2.93
1417 1860 0.804364 TTAGCTGCAGGAACGCATTG 59.196 50.000 17.12 0.00 42.06 2.82
1468 1911 4.853924 TTTTGTGCTGAAAATCTCCTCC 57.146 40.909 0.00 0.00 0.00 4.30
1487 1930 1.405391 CCGGTGCATGTGTATGTGAGA 60.405 52.381 0.00 0.00 36.65 3.27
1529 1972 5.779241 AGGATGGAATTGGAAGAAGTACA 57.221 39.130 0.00 0.00 0.00 2.90
1552 1995 4.763793 ACCCATGTATATGCTCTGAAATGC 59.236 41.667 0.00 0.00 32.79 3.56
1648 2091 2.159379 GCAGTACAAAGCTACCATTGGC 60.159 50.000 1.54 0.00 0.00 4.52
1669 2112 1.803334 CGGATTTCGTCACCAAGGAA 58.197 50.000 0.00 0.00 0.00 3.36
1716 2159 0.111061 TTGCAGGTGAGTGGAATGCT 59.889 50.000 0.00 0.00 37.76 3.79
1779 2222 0.257039 ATCACATCTGGGGTTGCTCC 59.743 55.000 0.00 0.00 0.00 4.70
1799 2242 2.159085 CCGTTTCTAGATCTGGGACACC 60.159 54.545 5.18 0.00 37.24 4.16
1979 2422 3.131577 GTCATTTGATGCATGACCATGGT 59.868 43.478 19.89 19.89 43.29 3.55
1980 2423 3.770388 TCATTTGATGCATGACCATGGTT 59.230 39.130 20.85 0.38 39.16 3.67
1981 2424 3.596310 TTTGATGCATGACCATGGTTG 57.404 42.857 20.85 15.62 39.16 3.77
1982 2425 2.219080 TGATGCATGACCATGGTTGT 57.781 45.000 20.85 8.06 39.16 3.32
1983 2426 3.362870 TGATGCATGACCATGGTTGTA 57.637 42.857 20.85 14.37 39.16 2.41
1984 2427 3.016031 TGATGCATGACCATGGTTGTAC 58.984 45.455 20.85 10.24 39.16 2.90
1990 2433 4.142687 GCATGACCATGGTTGTACTTGTAC 60.143 45.833 20.85 2.11 39.16 2.90
2057 2500 6.760298 TGTTCTTATGAGATGACAGCTTGATC 59.240 38.462 0.00 0.00 0.00 2.92
2211 2654 7.698506 AACTACTCATATAGGCGCAGTTATA 57.301 36.000 10.83 8.77 0.00 0.98
2328 2771 3.801050 CCATCAACATCTCTAGAACTGCG 59.199 47.826 0.00 0.00 0.00 5.18
2331 2774 4.676546 TCAACATCTCTAGAACTGCGATG 58.323 43.478 14.30 14.30 37.92 3.84
2394 2837 0.916809 GAGCTTAGTTAGGGGGCCAA 59.083 55.000 4.39 0.00 0.00 4.52
2395 2838 0.624254 AGCTTAGTTAGGGGGCCAAC 59.376 55.000 4.39 0.64 0.00 3.77
2396 2839 0.330267 GCTTAGTTAGGGGGCCAACA 59.670 55.000 4.39 0.00 0.00 3.33
2397 2840 1.063942 GCTTAGTTAGGGGGCCAACAT 60.064 52.381 4.39 0.00 0.00 2.71
2398 2841 2.654863 CTTAGTTAGGGGGCCAACATG 58.345 52.381 4.39 0.00 0.00 3.21
2399 2842 0.923358 TAGTTAGGGGGCCAACATGG 59.077 55.000 4.39 0.00 41.55 3.66
2400 2843 1.146544 AGTTAGGGGGCCAACATGGT 61.147 55.000 4.39 0.00 40.46 3.55
2401 2844 0.683179 GTTAGGGGGCCAACATGGTC 60.683 60.000 4.39 0.00 42.67 4.02
2406 2849 3.939564 GGCCAACATGGTCCATCC 58.060 61.111 0.00 0.00 40.46 3.51
2414 2857 3.428664 TGGTCCATCCATGCCCCC 61.429 66.667 0.00 0.00 41.93 5.40
2447 2890 3.132824 CCCACAGCAAAAAGGAGTTCTTT 59.867 43.478 0.00 0.00 46.82 2.52
2585 3029 6.778834 TGTCATGGCATTGATGTAAATTCT 57.221 33.333 0.00 0.00 0.00 2.40
2588 3032 5.657745 TCATGGCATTGATGTAAATTCTGGT 59.342 36.000 0.00 0.00 0.00 4.00
2591 3035 6.862209 TGGCATTGATGTAAATTCTGGTAAC 58.138 36.000 0.00 0.00 0.00 2.50
2593 3037 6.751888 GGCATTGATGTAAATTCTGGTAACAC 59.248 38.462 0.00 0.00 46.17 3.32
2598 3051 7.327975 TGATGTAAATTCTGGTAACACGATCT 58.672 34.615 0.00 0.00 46.17 2.75
2631 3084 6.568869 AGTGCTTGATACACAATCTAGACTC 58.431 40.000 0.00 0.00 39.10 3.36
2672 3125 6.186957 TGTTATGGCTGTTGATAATTCTGGT 58.813 36.000 0.00 0.00 0.00 4.00
2755 3210 3.909776 AATATCTGGATGTGCAATGCG 57.090 42.857 0.00 0.00 0.00 4.73
2770 3225 2.473530 ATGCGCATAATGTTGGAACG 57.526 45.000 24.02 0.00 0.00 3.95
2821 3276 2.731968 GCCTACAATGTTGGTTGATGCG 60.732 50.000 14.79 0.00 31.42 4.73
2824 3280 1.959985 ACAATGTTGGTTGATGCGGAA 59.040 42.857 0.00 0.00 33.37 4.30
2825 3281 2.363680 ACAATGTTGGTTGATGCGGAAA 59.636 40.909 0.00 0.00 33.37 3.13
2831 3287 4.509600 TGTTGGTTGATGCGGAAATTTTTC 59.490 37.500 0.00 0.00 36.46 2.29
2832 3288 4.327982 TGGTTGATGCGGAAATTTTTCA 57.672 36.364 5.48 0.00 38.92 2.69
2892 3349 4.521256 TCTGTATTTTGTTTGGTGGGCTAC 59.479 41.667 0.00 0.00 0.00 3.58
2904 3361 1.737199 TGGGCTACCAGGTTAACTGT 58.263 50.000 0.00 3.67 46.06 3.55
2933 3390 4.314740 TTTTTAATGTCCGGGCATATGC 57.685 40.909 24.41 19.79 41.14 3.14
2947 3404 6.127647 CCGGGCATATGCTTAATCATACAAAT 60.128 38.462 26.12 0.00 41.70 2.32
2948 3405 6.748658 CGGGCATATGCTTAATCATACAAATG 59.251 38.462 26.12 0.00 41.70 2.32
2985 3442 8.364142 ACTATCATTTCTATCTCTTGTAGTGCC 58.636 37.037 0.00 0.00 0.00 5.01
3116 3573 1.474077 GTAGATGGTGGCAAAAGCAGG 59.526 52.381 0.00 0.00 0.00 4.85
3341 3800 0.392193 CCAGGACATGTGAGTCAGCC 60.392 60.000 1.15 0.00 40.29 4.85
3347 3806 3.447586 GGACATGTGAGTCAGCCTACTTA 59.552 47.826 1.15 0.00 40.29 2.24
3406 3865 9.851686 ACATGGATTAAGCTTATCTTGTGAATA 57.148 29.630 7.08 0.00 36.25 1.75
3492 3951 3.129988 GCTTGGATAGCTGCATTCTGTTT 59.870 43.478 1.02 0.00 46.77 2.83
3498 3957 8.518430 TGGATAGCTGCATTCTGTTTTATTTA 57.482 30.769 1.02 0.00 0.00 1.40
3499 3958 8.623903 TGGATAGCTGCATTCTGTTTTATTTAG 58.376 33.333 1.02 0.00 0.00 1.85
3500 3959 8.078596 GGATAGCTGCATTCTGTTTTATTTAGG 58.921 37.037 1.02 0.00 0.00 2.69
3501 3960 6.840780 AGCTGCATTCTGTTTTATTTAGGT 57.159 33.333 1.02 0.00 0.00 3.08
3502 3961 7.938140 AGCTGCATTCTGTTTTATTTAGGTA 57.062 32.000 1.02 0.00 0.00 3.08
3503 3962 7.762382 AGCTGCATTCTGTTTTATTTAGGTAC 58.238 34.615 1.02 0.00 0.00 3.34
3505 3964 7.910683 GCTGCATTCTGTTTTATTTAGGTACTC 59.089 37.037 0.00 0.00 41.75 2.59
3506 3965 8.276252 TGCATTCTGTTTTATTTAGGTACTCC 57.724 34.615 0.00 0.00 41.75 3.85
3507 3966 7.338449 TGCATTCTGTTTTATTTAGGTACTCCC 59.662 37.037 0.00 0.00 41.75 4.30
3509 3968 9.110502 CATTCTGTTTTATTTAGGTACTCCCTC 57.889 37.037 0.00 0.00 44.81 4.30
3510 3969 7.191593 TCTGTTTTATTTAGGTACTCCCTCC 57.808 40.000 0.00 0.00 44.81 4.30
3511 3970 5.981174 TGTTTTATTTAGGTACTCCCTCCG 58.019 41.667 0.00 0.00 44.81 4.63
3514 3973 5.859205 TTATTTAGGTACTCCCTCCGTTC 57.141 43.478 0.00 0.00 44.81 3.95
3515 3974 1.755179 TTAGGTACTCCCTCCGTTCG 58.245 55.000 0.00 0.00 44.81 3.95
3516 3975 0.107017 TAGGTACTCCCTCCGTTCGG 60.107 60.000 4.74 4.74 44.81 4.30
3517 3976 1.379044 GGTACTCCCTCCGTTCGGA 60.379 63.158 13.34 13.34 0.00 4.55
3518 3977 0.967380 GGTACTCCCTCCGTTCGGAA 60.967 60.000 14.79 0.04 33.41 4.30
3520 3979 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
3521 3980 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3522 3981 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3523 3982 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3524 3983 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3525 3984 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3526 3985 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3527 3986 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3528 3987 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
3529 3988 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
3530 3989 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
3531 3990 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
3532 3991 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
3533 3992 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
3534 3993 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
3535 3994 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
3536 3995 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
3537 3996 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
3538 3997 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
3539 3998 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
3540 3999 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
3541 4000 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
3542 4001 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
3543 4002 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
3544 4003 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
3545 4004 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
3546 4005 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
3547 4006 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
3548 4007 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
3549 4008 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
3550 4009 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
3551 4010 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
3552 4011 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
3553 4012 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
3554 4013 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
3555 4014 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
3569 4028 9.890629 TCTAGAACTAAAATACGTCTAGGTACA 57.109 33.333 0.00 0.00 0.00 2.90
3572 4031 8.628280 AGAACTAAAATACGTCTAGGTACATCC 58.372 37.037 0.00 0.00 0.00 3.51
3573 4032 7.886629 ACTAAAATACGTCTAGGTACATCCA 57.113 36.000 0.00 0.00 39.02 3.41
3574 4033 8.474710 ACTAAAATACGTCTAGGTACATCCAT 57.525 34.615 0.00 0.00 39.02 3.41
3575 4034 8.921205 ACTAAAATACGTCTAGGTACATCCATT 58.079 33.333 0.00 0.00 39.02 3.16
3576 4035 9.760077 CTAAAATACGTCTAGGTACATCCATTT 57.240 33.333 0.00 0.00 39.02 2.32
3578 4037 9.457436 AAAATACGTCTAGGTACATCCATTTTT 57.543 29.630 0.00 0.00 39.02 1.94
3579 4038 8.433421 AATACGTCTAGGTACATCCATTTTTG 57.567 34.615 0.00 0.00 39.02 2.44
3580 4039 4.634443 ACGTCTAGGTACATCCATTTTTGC 59.366 41.667 0.00 0.00 39.02 3.68
3581 4040 4.634004 CGTCTAGGTACATCCATTTTTGCA 59.366 41.667 0.00 0.00 39.02 4.08
3582 4041 5.123186 CGTCTAGGTACATCCATTTTTGCAA 59.877 40.000 0.00 0.00 39.02 4.08
3583 4042 6.322491 GTCTAGGTACATCCATTTTTGCAAC 58.678 40.000 0.00 0.00 39.02 4.17
3584 4043 6.007076 TCTAGGTACATCCATTTTTGCAACA 58.993 36.000 0.00 0.00 39.02 3.33
3585 4044 5.543507 AGGTACATCCATTTTTGCAACAA 57.456 34.783 0.00 0.00 39.02 2.83
3586 4045 5.540911 AGGTACATCCATTTTTGCAACAAG 58.459 37.500 0.00 0.00 39.02 3.16
3587 4046 5.070313 AGGTACATCCATTTTTGCAACAAGT 59.930 36.000 0.00 0.00 39.02 3.16
3588 4047 6.266558 AGGTACATCCATTTTTGCAACAAGTA 59.733 34.615 0.00 0.00 39.02 2.24
3589 4048 6.926272 GGTACATCCATTTTTGCAACAAGTAA 59.074 34.615 0.00 0.00 35.97 2.24
3590 4049 7.602265 GGTACATCCATTTTTGCAACAAGTAAT 59.398 33.333 0.00 0.00 35.97 1.89
3591 4050 8.987890 GTACATCCATTTTTGCAACAAGTAATT 58.012 29.630 0.00 0.00 0.00 1.40
3592 4051 8.086851 ACATCCATTTTTGCAACAAGTAATTC 57.913 30.769 0.00 0.00 0.00 2.17
3593 4052 7.173047 ACATCCATTTTTGCAACAAGTAATTCC 59.827 33.333 0.00 0.00 0.00 3.01
3594 4053 5.694006 TCCATTTTTGCAACAAGTAATTCCG 59.306 36.000 0.00 0.00 0.00 4.30
3595 4054 5.694006 CCATTTTTGCAACAAGTAATTCCGA 59.306 36.000 0.00 0.00 0.00 4.55
3596 4055 6.201806 CCATTTTTGCAACAAGTAATTCCGAA 59.798 34.615 0.00 0.00 0.00 4.30
3597 4056 6.576551 TTTTTGCAACAAGTAATTCCGAAC 57.423 33.333 0.00 0.00 0.00 3.95
3598 4057 3.529634 TGCAACAAGTAATTCCGAACG 57.470 42.857 0.00 0.00 0.00 3.95
3599 4058 2.224549 TGCAACAAGTAATTCCGAACGG 59.775 45.455 6.94 6.94 0.00 4.44
3600 4059 2.481185 GCAACAAGTAATTCCGAACGGA 59.519 45.455 12.04 12.04 43.52 4.69
3601 4060 3.424433 GCAACAAGTAATTCCGAACGGAG 60.424 47.826 15.34 5.60 46.06 4.63
3602 4061 2.968675 ACAAGTAATTCCGAACGGAGG 58.031 47.619 15.34 4.52 46.06 4.30
3603 4062 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3604 4063 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3605 4064 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3606 4065 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3607 4066 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3608 4067 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
3609 4068 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
3610 4069 0.038744 TCCGAACGGAGGGAGTAGTT 59.961 55.000 12.04 0.00 39.76 2.24
3611 4070 0.172803 CCGAACGGAGGGAGTAGTTG 59.827 60.000 7.53 0.00 37.50 3.16
3612 4071 0.886563 CGAACGGAGGGAGTAGTTGT 59.113 55.000 0.00 0.00 0.00 3.32
3613 4072 1.271656 CGAACGGAGGGAGTAGTTGTT 59.728 52.381 0.00 0.00 0.00 2.83
3614 4073 2.288640 CGAACGGAGGGAGTAGTTGTTT 60.289 50.000 0.00 0.00 0.00 2.83
3615 4074 3.057315 CGAACGGAGGGAGTAGTTGTTTA 60.057 47.826 0.00 0.00 0.00 2.01
3616 4075 3.949842 ACGGAGGGAGTAGTTGTTTAC 57.050 47.619 0.00 0.00 0.00 2.01
3617 4076 3.233507 ACGGAGGGAGTAGTTGTTTACA 58.766 45.455 0.00 0.00 0.00 2.41
3618 4077 3.836562 ACGGAGGGAGTAGTTGTTTACAT 59.163 43.478 0.00 0.00 0.00 2.29
3619 4078 4.181578 CGGAGGGAGTAGTTGTTTACATG 58.818 47.826 0.00 0.00 0.00 3.21
3620 4079 4.081862 CGGAGGGAGTAGTTGTTTACATGA 60.082 45.833 0.00 0.00 0.00 3.07
3621 4080 5.568023 CGGAGGGAGTAGTTGTTTACATGAA 60.568 44.000 0.00 0.00 0.00 2.57
3622 4081 6.415573 GGAGGGAGTAGTTGTTTACATGAAT 58.584 40.000 0.00 0.00 0.00 2.57
3623 4082 6.884836 GGAGGGAGTAGTTGTTTACATGAATT 59.115 38.462 0.00 0.00 0.00 2.17
3624 4083 8.044908 GGAGGGAGTAGTTGTTTACATGAATTA 58.955 37.037 0.00 0.00 0.00 1.40
3625 4084 8.788325 AGGGAGTAGTTGTTTACATGAATTAC 57.212 34.615 0.00 0.00 0.00 1.89
3626 4085 8.603304 AGGGAGTAGTTGTTTACATGAATTACT 58.397 33.333 0.00 0.00 0.00 2.24
3627 4086 9.227777 GGGAGTAGTTGTTTACATGAATTACTT 57.772 33.333 0.00 0.00 0.00 2.24
3633 4092 8.495949 AGTTGTTTACATGAATTACTTGTCTCG 58.504 33.333 0.00 0.00 37.85 4.04
3634 4093 7.359262 TGTTTACATGAATTACTTGTCTCGG 57.641 36.000 0.00 0.00 37.85 4.63
3635 4094 7.156000 TGTTTACATGAATTACTTGTCTCGGA 58.844 34.615 0.00 0.00 37.85 4.55
3636 4095 7.658167 TGTTTACATGAATTACTTGTCTCGGAA 59.342 33.333 0.00 0.00 37.85 4.30
3637 4096 8.500773 GTTTACATGAATTACTTGTCTCGGAAA 58.499 33.333 0.00 0.00 37.85 3.13
3638 4097 8.786826 TTACATGAATTACTTGTCTCGGAAAT 57.213 30.769 0.00 0.00 37.85 2.17
3639 4098 7.076842 ACATGAATTACTTGTCTCGGAAATG 57.923 36.000 0.00 0.00 32.60 2.32
3640 4099 6.094048 ACATGAATTACTTGTCTCGGAAATGG 59.906 38.462 0.00 0.00 32.60 3.16
3641 4100 5.800296 TGAATTACTTGTCTCGGAAATGGA 58.200 37.500 0.00 0.00 0.00 3.41
3642 4101 6.414732 TGAATTACTTGTCTCGGAAATGGAT 58.585 36.000 0.00 0.00 0.00 3.41
3643 4102 6.316140 TGAATTACTTGTCTCGGAAATGGATG 59.684 38.462 0.00 0.00 0.00 3.51
3644 4103 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
3645 4104 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
3646 4105 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
3647 4106 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
3648 4107 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
3649 4108 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
3650 4109 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
3651 4110 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
3652 4111 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
3653 4112 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
3654 4113 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
3655 4114 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
3656 4115 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
3657 4116 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
3658 4117 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
3672 4131 9.890629 TCTAGAACTAAAATACGTCTAGGTACA 57.109 33.333 0.00 0.00 0.00 2.90
3675 4134 8.628280 AGAACTAAAATACGTCTAGGTACATCC 58.372 37.037 0.00 0.00 0.00 3.51
3676 4135 7.886629 ACTAAAATACGTCTAGGTACATCCA 57.113 36.000 0.00 0.00 39.02 3.41
3677 4136 8.474710 ACTAAAATACGTCTAGGTACATCCAT 57.525 34.615 0.00 0.00 39.02 3.41
3678 4137 8.921205 ACTAAAATACGTCTAGGTACATCCATT 58.079 33.333 0.00 0.00 39.02 3.16
3679 4138 9.760077 CTAAAATACGTCTAGGTACATCCATTT 57.240 33.333 0.00 0.00 39.02 2.32
3681 4140 9.457436 AAAATACGTCTAGGTACATCCATTTTT 57.543 29.630 0.00 0.00 39.02 1.94
3682 4141 8.433421 AATACGTCTAGGTACATCCATTTTTG 57.567 34.615 0.00 0.00 39.02 2.44
3683 4142 4.634443 ACGTCTAGGTACATCCATTTTTGC 59.366 41.667 0.00 0.00 39.02 3.68
3684 4143 4.634004 CGTCTAGGTACATCCATTTTTGCA 59.366 41.667 0.00 0.00 39.02 4.08
3685 4144 5.123186 CGTCTAGGTACATCCATTTTTGCAA 59.877 40.000 0.00 0.00 39.02 4.08
3686 4145 6.322491 GTCTAGGTACATCCATTTTTGCAAC 58.678 40.000 0.00 0.00 39.02 4.17
3687 4146 6.007076 TCTAGGTACATCCATTTTTGCAACA 58.993 36.000 0.00 0.00 39.02 3.33
3688 4147 5.543507 AGGTACATCCATTTTTGCAACAA 57.456 34.783 0.00 0.00 39.02 2.83
3689 4148 5.540911 AGGTACATCCATTTTTGCAACAAG 58.459 37.500 0.00 0.00 39.02 3.16
3690 4149 5.070313 AGGTACATCCATTTTTGCAACAAGT 59.930 36.000 0.00 0.00 39.02 3.16
3691 4150 6.266558 AGGTACATCCATTTTTGCAACAAGTA 59.733 34.615 0.00 0.00 39.02 2.24
3692 4151 6.926272 GGTACATCCATTTTTGCAACAAGTAA 59.074 34.615 0.00 0.00 35.97 2.24
3693 4152 7.602265 GGTACATCCATTTTTGCAACAAGTAAT 59.398 33.333 0.00 0.00 35.97 1.89
3694 4153 8.987890 GTACATCCATTTTTGCAACAAGTAATT 58.012 29.630 0.00 0.00 0.00 1.40
3695 4154 8.086851 ACATCCATTTTTGCAACAAGTAATTC 57.913 30.769 0.00 0.00 0.00 2.17
3696 4155 7.173047 ACATCCATTTTTGCAACAAGTAATTCC 59.827 33.333 0.00 0.00 0.00 3.01
3697 4156 5.694006 TCCATTTTTGCAACAAGTAATTCCG 59.306 36.000 0.00 0.00 0.00 4.30
3698 4157 5.694006 CCATTTTTGCAACAAGTAATTCCGA 59.306 36.000 0.00 0.00 0.00 4.55
3699 4158 6.201806 CCATTTTTGCAACAAGTAATTCCGAA 59.798 34.615 0.00 0.00 0.00 4.30
3700 4159 6.576551 TTTTTGCAACAAGTAATTCCGAAC 57.423 33.333 0.00 0.00 0.00 3.95
3701 4160 3.529634 TGCAACAAGTAATTCCGAACG 57.470 42.857 0.00 0.00 0.00 3.95
3702 4161 2.224549 TGCAACAAGTAATTCCGAACGG 59.775 45.455 6.94 6.94 0.00 4.44
3703 4162 2.481185 GCAACAAGTAATTCCGAACGGA 59.519 45.455 12.04 12.04 43.52 4.69
3704 4163 3.424433 GCAACAAGTAATTCCGAACGGAG 60.424 47.826 15.34 5.60 46.06 4.63
3705 4164 2.968675 ACAAGTAATTCCGAACGGAGG 58.031 47.619 15.34 4.52 46.06 4.30
3706 4165 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3707 4166 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3708 4167 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3709 4168 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3710 4169 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3711 4170 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
3719 4178 3.949842 ACGGAGGGAGTAGTTGTTTAC 57.050 47.619 0.00 0.00 0.00 2.01
3745 4204 3.327757 TCCTGTGTAAGGCTTCTGACAAT 59.672 43.478 1.30 0.00 46.92 2.71
3752 4211 6.651225 GTGTAAGGCTTCTGACAATCTTAAGT 59.349 38.462 1.30 0.00 33.85 2.24
3753 4212 6.874134 TGTAAGGCTTCTGACAATCTTAAGTC 59.126 38.462 1.30 0.00 29.13 3.01
3794 4253 5.171339 AGCTTCTGTTCATACTTGTCCAT 57.829 39.130 0.00 0.00 0.00 3.41
3797 4256 7.341805 AGCTTCTGTTCATACTTGTCCATTAT 58.658 34.615 0.00 0.00 0.00 1.28
3853 4312 4.761227 TCAATGTGCATGACAGCTCTTAAA 59.239 37.500 0.00 0.00 38.23 1.52
3855 4314 3.076621 TGTGCATGACAGCTCTTAAAGG 58.923 45.455 0.00 0.00 34.99 3.11
3858 4317 4.216257 GTGCATGACAGCTCTTAAAGGAAA 59.784 41.667 0.00 0.00 34.99 3.13
3859 4318 4.216257 TGCATGACAGCTCTTAAAGGAAAC 59.784 41.667 0.00 0.00 34.99 2.78
3860 4319 4.216257 GCATGACAGCTCTTAAAGGAAACA 59.784 41.667 0.00 0.00 0.00 2.83
3861 4320 5.693814 CATGACAGCTCTTAAAGGAAACAC 58.306 41.667 0.00 0.00 0.00 3.32
3862 4321 5.036117 TGACAGCTCTTAAAGGAAACACT 57.964 39.130 0.00 0.00 0.00 3.55
3863 4322 6.169557 TGACAGCTCTTAAAGGAAACACTA 57.830 37.500 0.00 0.00 0.00 2.74
3907 4366 2.263077 GATGTGCTGAACCTCTGTACG 58.737 52.381 0.00 0.00 34.64 3.67
3909 4368 1.014564 GTGCTGAACCTCTGTACGGC 61.015 60.000 0.00 0.00 35.52 5.68
3940 4399 0.037326 AAGATGGCACGTCACGACAT 60.037 50.000 2.91 5.26 0.00 3.06
3941 4400 0.815095 AGATGGCACGTCACGACATA 59.185 50.000 2.91 0.00 0.00 2.29
4000 4459 7.119846 AGCTTGTTTTTATTAGTGCACCTCTAG 59.880 37.037 14.63 1.95 0.00 2.43
4195 4655 3.058016 CAGATTTTGCCTACTGTGTGTGG 60.058 47.826 0.00 0.00 0.00 4.17
4289 4749 5.068460 CCACTCAATTCACTTTTGTAACCCA 59.932 40.000 0.00 0.00 0.00 4.51
4323 4783 4.946784 AGCAACTATGGTTTCGATTCAC 57.053 40.909 0.00 0.00 32.07 3.18
4439 4899 4.155462 AGCCTCAATTATATTCATGCAGCG 59.845 41.667 0.00 0.00 0.00 5.18
4497 4957 4.752101 CGAGGTGGGCATAATTCTTCTAAG 59.248 45.833 0.00 0.00 0.00 2.18
4517 4977 8.871629 TCTAAGTGTTTGGGAATATTTTGCTA 57.128 30.769 0.00 0.00 0.00 3.49
4539 4999 9.773328 TGCTAGATTGAAAATTTGAAATACTCG 57.227 29.630 0.00 0.00 0.00 4.18
4657 5121 5.656416 TGAAATTTCAACCCTGGCTAATAGG 59.344 40.000 18.45 0.00 33.55 2.57
4658 5122 5.466127 AATTTCAACCCTGGCTAATAGGA 57.534 39.130 0.00 0.00 37.52 2.94
4659 5123 4.938575 TTTCAACCCTGGCTAATAGGAA 57.061 40.909 0.00 0.00 37.52 3.36
4660 5124 3.926058 TCAACCCTGGCTAATAGGAAC 57.074 47.619 0.00 0.00 37.52 3.62
4661 5125 2.508300 TCAACCCTGGCTAATAGGAACC 59.492 50.000 0.00 0.00 37.52 3.62
4662 5126 2.241176 CAACCCTGGCTAATAGGAACCA 59.759 50.000 0.00 0.00 37.52 3.67
4663 5127 1.844497 ACCCTGGCTAATAGGAACCAC 59.156 52.381 0.00 0.00 37.52 4.16
4678 5142 4.320456 CACCTGCGTGTGCCCTCT 62.320 66.667 0.00 0.00 41.78 3.69
4703 5167 3.468140 GTACGCTCCCCTGACCCC 61.468 72.222 0.00 0.00 0.00 4.95
4721 5185 1.341531 CCCGAGTGCCTTTCGAGATAT 59.658 52.381 3.54 0.00 40.36 1.63
4722 5186 2.224066 CCCGAGTGCCTTTCGAGATATT 60.224 50.000 3.54 0.00 40.36 1.28
4723 5187 3.005472 CCCGAGTGCCTTTCGAGATATTA 59.995 47.826 3.54 0.00 40.36 0.98
4724 5188 3.982058 CCGAGTGCCTTTCGAGATATTAC 59.018 47.826 3.54 0.00 40.36 1.89
4726 5190 4.608951 GAGTGCCTTTCGAGATATTACGT 58.391 43.478 0.00 0.00 0.00 3.57
4728 5192 4.338682 AGTGCCTTTCGAGATATTACGTCT 59.661 41.667 0.00 0.00 0.00 4.18
4729 5193 4.441415 GTGCCTTTCGAGATATTACGTCTG 59.559 45.833 0.00 0.00 0.00 3.51
4732 5196 6.016527 TGCCTTTCGAGATATTACGTCTGTAT 60.017 38.462 0.00 0.00 0.00 2.29
4733 5197 6.523893 GCCTTTCGAGATATTACGTCTGTATC 59.476 42.308 0.00 0.00 0.00 2.24
4734 5198 7.582352 CCTTTCGAGATATTACGTCTGTATCA 58.418 38.462 13.75 0.00 0.00 2.15
4735 5199 8.074370 CCTTTCGAGATATTACGTCTGTATCAA 58.926 37.037 13.75 0.00 0.00 2.57
4736 5200 9.447040 CTTTCGAGATATTACGTCTGTATCAAA 57.553 33.333 13.75 7.49 0.00 2.69
4737 5201 9.791820 TTTCGAGATATTACGTCTGTATCAAAA 57.208 29.630 13.75 9.58 0.00 2.44
4738 5202 9.961265 TTCGAGATATTACGTCTGTATCAAAAT 57.039 29.630 13.75 0.21 0.00 1.82
4757 5221 8.597662 TCAAAATATAAGACGTATTGGTAGGC 57.402 34.615 5.52 0.00 0.00 3.93
4758 5222 8.426489 TCAAAATATAAGACGTATTGGTAGGCT 58.574 33.333 5.52 0.00 0.00 4.58
4759 5223 9.701098 CAAAATATAAGACGTATTGGTAGGCTA 57.299 33.333 5.52 0.00 0.00 3.93
4766 5230 7.592885 AGACGTATTGGTAGGCTATTTTAGA 57.407 36.000 0.00 0.00 0.00 2.10
4767 5231 8.191534 AGACGTATTGGTAGGCTATTTTAGAT 57.808 34.615 0.00 0.00 0.00 1.98
4768 5232 9.305555 AGACGTATTGGTAGGCTATTTTAGATA 57.694 33.333 0.00 0.00 0.00 1.98
4795 5259 6.856135 AACGTATTAGTAGGCCATTTTAGC 57.144 37.500 5.01 0.00 0.00 3.09
4825 5289 6.790232 AATGTCTTATGTTTTGGTATGGGG 57.210 37.500 0.00 0.00 0.00 4.96
4826 5290 5.263872 TGTCTTATGTTTTGGTATGGGGT 57.736 39.130 0.00 0.00 0.00 4.95
4827 5291 6.390048 TGTCTTATGTTTTGGTATGGGGTA 57.610 37.500 0.00 0.00 0.00 3.69
4828 5292 6.419791 TGTCTTATGTTTTGGTATGGGGTAG 58.580 40.000 0.00 0.00 0.00 3.18
4829 5293 6.012333 TGTCTTATGTTTTGGTATGGGGTAGT 60.012 38.462 0.00 0.00 0.00 2.73
4830 5294 7.182387 TGTCTTATGTTTTGGTATGGGGTAGTA 59.818 37.037 0.00 0.00 0.00 1.82
4831 5295 8.215736 GTCTTATGTTTTGGTATGGGGTAGTAT 58.784 37.037 0.00 0.00 0.00 2.12
4832 5296 9.449896 TCTTATGTTTTGGTATGGGGTAGTATA 57.550 33.333 0.00 0.00 0.00 1.47
4833 5297 9.498176 CTTATGTTTTGGTATGGGGTAGTATAC 57.502 37.037 0.00 0.00 42.04 1.47
4834 5298 7.701257 ATGTTTTGGTATGGGGTAGTATACT 57.299 36.000 10.87 10.87 42.51 2.12
4835 5299 8.802057 ATGTTTTGGTATGGGGTAGTATACTA 57.198 34.615 8.59 8.59 42.51 1.82
4836 5300 8.621126 TGTTTTGGTATGGGGTAGTATACTAA 57.379 34.615 14.20 0.00 42.51 2.24
4837 5301 9.055689 TGTTTTGGTATGGGGTAGTATACTAAA 57.944 33.333 14.20 0.60 42.51 1.85
4839 5303 8.858944 TTTGGTATGGGGTAGTATACTAAACT 57.141 34.615 14.20 1.51 42.51 2.66
4840 5304 9.950306 TTTGGTATGGGGTAGTATACTAAACTA 57.050 33.333 14.20 8.56 42.51 2.24
4841 5305 8.940397 TGGTATGGGGTAGTATACTAAACTAC 57.060 38.462 14.20 10.92 45.62 2.73
4861 5325 9.787435 AAACTACAGATAGTAAACATGTTTCCA 57.213 29.630 26.46 13.43 41.00 3.53
4865 5329 6.149474 ACAGATAGTAAACATGTTTCCAGCAC 59.851 38.462 26.46 18.13 34.23 4.40
4866 5330 6.149308 CAGATAGTAAACATGTTTCCAGCACA 59.851 38.462 26.46 5.35 34.23 4.57
4867 5331 6.714810 AGATAGTAAACATGTTTCCAGCACAA 59.285 34.615 26.46 4.59 34.23 3.33
4868 5332 5.789643 AGTAAACATGTTTCCAGCACAAT 57.210 34.783 26.46 4.67 34.23 2.71
4869 5333 6.160576 AGTAAACATGTTTCCAGCACAATT 57.839 33.333 26.46 1.59 34.23 2.32
4870 5334 5.984926 AGTAAACATGTTTCCAGCACAATTG 59.015 36.000 26.46 3.24 34.23 2.32
4871 5335 4.405116 AACATGTTTCCAGCACAATTGT 57.595 36.364 4.92 4.92 0.00 2.71
4873 5337 6.406288 TAAACATGTTTCCAGCACAATTGTGA 60.406 34.615 36.65 16.98 39.75 3.58
4874 5338 8.159075 TAAACATGTTTCCAGCACAATTGTGAG 61.159 37.037 36.65 27.01 39.75 3.51
4886 5350 5.057843 ACAATTGTGAGGGATATGATGCT 57.942 39.130 11.07 0.00 0.00 3.79
4887 5351 4.825634 ACAATTGTGAGGGATATGATGCTG 59.174 41.667 11.07 0.00 0.00 4.41
4888 5352 3.497103 TTGTGAGGGATATGATGCTGG 57.503 47.619 0.00 0.00 0.00 4.85
4889 5353 2.411583 TGTGAGGGATATGATGCTGGT 58.588 47.619 0.00 0.00 0.00 4.00
4890 5354 2.779430 TGTGAGGGATATGATGCTGGTT 59.221 45.455 0.00 0.00 0.00 3.67
4891 5355 3.181451 TGTGAGGGATATGATGCTGGTTC 60.181 47.826 0.00 0.00 0.00 3.62
4894 5358 3.582208 GAGGGATATGATGCTGGTTCTCT 59.418 47.826 0.00 0.00 0.00 3.10
4895 5359 3.979347 AGGGATATGATGCTGGTTCTCTT 59.021 43.478 0.00 0.00 0.00 2.85
4897 5361 4.041444 GGGATATGATGCTGGTTCTCTTCT 59.959 45.833 0.00 0.00 0.00 2.85
4898 5362 5.455899 GGGATATGATGCTGGTTCTCTTCTT 60.456 44.000 0.00 0.00 0.00 2.52
4899 5363 5.469421 GGATATGATGCTGGTTCTCTTCTTG 59.531 44.000 0.00 0.00 0.00 3.02
4900 5364 4.564782 ATGATGCTGGTTCTCTTCTTGA 57.435 40.909 0.00 0.00 0.00 3.02
4901 5365 4.356405 TGATGCTGGTTCTCTTCTTGAA 57.644 40.909 0.00 0.00 0.00 2.69
4902 5366 4.717877 TGATGCTGGTTCTCTTCTTGAAA 58.282 39.130 0.00 0.00 0.00 2.69
4903 5367 5.319453 TGATGCTGGTTCTCTTCTTGAAAT 58.681 37.500 0.00 0.00 0.00 2.17
4904 5368 5.771666 TGATGCTGGTTCTCTTCTTGAAATT 59.228 36.000 0.00 0.00 0.00 1.82
4905 5369 6.266103 TGATGCTGGTTCTCTTCTTGAAATTT 59.734 34.615 0.00 0.00 0.00 1.82
4907 5371 7.581213 TGCTGGTTCTCTTCTTGAAATTTTA 57.419 32.000 0.00 0.00 0.00 1.52
4908 5372 7.651808 TGCTGGTTCTCTTCTTGAAATTTTAG 58.348 34.615 0.00 0.00 0.00 1.85
4949 6296 2.644078 GCTCGTGCTTTTCTTTCTGTG 58.356 47.619 1.41 0.00 36.03 3.66
4950 6297 2.287915 GCTCGTGCTTTTCTTTCTGTGA 59.712 45.455 1.41 0.00 36.03 3.58
4952 6299 4.461405 CTCGTGCTTTTCTTTCTGTGATG 58.539 43.478 0.00 0.00 0.00 3.07
4953 6300 4.126437 TCGTGCTTTTCTTTCTGTGATGA 58.874 39.130 0.00 0.00 0.00 2.92
4954 6301 4.024893 TCGTGCTTTTCTTTCTGTGATGAC 60.025 41.667 0.00 0.00 0.00 3.06
4955 6302 4.024556 CGTGCTTTTCTTTCTGTGATGACT 60.025 41.667 0.00 0.00 0.00 3.41
4956 6303 5.504665 CGTGCTTTTCTTTCTGTGATGACTT 60.505 40.000 0.00 0.00 0.00 3.01
4957 6304 6.268566 GTGCTTTTCTTTCTGTGATGACTTT 58.731 36.000 0.00 0.00 0.00 2.66
4959 6306 7.589221 GTGCTTTTCTTTCTGTGATGACTTTAG 59.411 37.037 0.00 0.00 0.00 1.85
4960 6307 6.580416 GCTTTTCTTTCTGTGATGACTTTAGC 59.420 38.462 0.00 0.00 0.00 3.09
4969 6322 6.542005 TCTGTGATGACTTTAGCTTGTTTTGA 59.458 34.615 0.00 0.00 0.00 2.69
4972 6325 5.592282 TGATGACTTTAGCTTGTTTTGACCA 59.408 36.000 0.00 0.00 0.00 4.02
4988 6341 8.154203 TGTTTTGACCAATGATACTCAGAACTA 58.846 33.333 0.00 0.00 31.97 2.24
4991 6344 7.101652 TGACCAATGATACTCAGAACTACTC 57.898 40.000 0.00 0.00 0.00 2.59
4994 6347 5.600484 CCAATGATACTCAGAACTACTCCCT 59.400 44.000 0.00 0.00 0.00 4.20
4998 6351 0.741915 CTCAGAACTACTCCCTCCGC 59.258 60.000 0.00 0.00 0.00 5.54
4999 6352 0.683504 TCAGAACTACTCCCTCCGCC 60.684 60.000 0.00 0.00 0.00 6.13
5011 6365 4.030913 CTCCCTCCGCCCATAATATAAGA 58.969 47.826 0.00 0.00 0.00 2.10
5012 6366 4.631234 TCCCTCCGCCCATAATATAAGAT 58.369 43.478 0.00 0.00 0.00 2.40
5013 6367 5.784023 TCCCTCCGCCCATAATATAAGATA 58.216 41.667 0.00 0.00 0.00 1.98
5017 6371 7.365652 CCCTCCGCCCATAATATAAGATAGTTT 60.366 40.741 0.00 0.00 0.00 2.66
5020 6374 9.444600 TCCGCCCATAATATAAGATAGTTTTTC 57.555 33.333 0.00 0.00 0.00 2.29
5021 6375 9.449719 CCGCCCATAATATAAGATAGTTTTTCT 57.550 33.333 0.00 0.00 0.00 2.52
5065 6440 3.335356 ATCCACCTTGAGCTGCCGG 62.335 63.158 0.00 0.00 0.00 6.13
5067 6442 2.743928 CACCTTGAGCTGCCGGTC 60.744 66.667 1.90 0.00 38.14 4.79
5078 6456 2.152016 GCTGCCGGTCTAGTTTTTCTT 58.848 47.619 1.90 0.00 0.00 2.52
5093 6471 9.415544 CTAGTTTTTCTTTCTATTTGCTGCATT 57.584 29.630 1.84 0.00 0.00 3.56
5114 6492 6.551736 CATTATTACTTGGTCCAAAACTCGG 58.448 40.000 5.64 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 27 2.841044 ACAGGGACCGGTCACGTT 60.841 61.111 34.40 21.16 38.25 3.99
81 85 1.451387 CGGCGCCCTAAATCCAACT 60.451 57.895 23.46 0.00 0.00 3.16
215 224 3.040795 CAGCGCATGCATCTTTATTCAC 58.959 45.455 19.57 0.00 46.23 3.18
535 564 4.402155 GCATGGGATGATTTAGTCCACAAA 59.598 41.667 0.00 0.00 36.19 2.83
587 616 7.893658 TGGTTTAGTCCACAAAGTTGTAAAAA 58.106 30.769 0.00 0.00 39.91 1.94
625 654 5.043737 AGCACTAAAGACCCACAAACTTA 57.956 39.130 0.00 0.00 0.00 2.24
640 669 0.034756 TTGCGAGGCAAGAGCACTAA 59.965 50.000 0.00 0.00 43.99 2.24
946 983 4.717629 CGGCTTGTCGGCTCGTGA 62.718 66.667 0.00 0.00 35.72 4.35
1140 1557 1.682849 CAAATCGAGACCCCCACCA 59.317 57.895 0.00 0.00 0.00 4.17
1149 1566 2.028203 TGCAGTCACATCCAAATCGAGA 60.028 45.455 0.00 0.00 0.00 4.04
1165 1594 1.973281 CAAGCACGGGGATTGCAGT 60.973 57.895 0.00 0.00 42.83 4.40
1243 1675 0.815615 CGGCCCATTAGAGGTCAAGC 60.816 60.000 0.00 0.00 0.00 4.01
1244 1676 0.815615 GCGGCCCATTAGAGGTCAAG 60.816 60.000 0.00 0.00 0.00 3.02
1251 1683 0.033601 ACCAAATGCGGCCCATTAGA 60.034 50.000 16.77 0.00 43.22 2.10
1269 1701 1.711500 CGGTTAAACGATGGCGGAC 59.289 57.895 7.23 0.00 43.17 4.79
1468 1911 2.008752 TCTCACATACACATGCACCG 57.991 50.000 0.00 0.00 35.39 4.94
1508 1951 4.640647 GGTGTACTTCTTCCAATTCCATCC 59.359 45.833 0.00 0.00 0.00 3.51
1529 1972 4.763793 GCATTTCAGAGCATATACATGGGT 59.236 41.667 0.00 0.00 32.36 4.51
1552 1995 5.163814 GCACAGAGTACAAAAATGAGGCTAG 60.164 44.000 0.00 0.00 0.00 3.42
1648 2091 1.419922 CTTGGTGACGAAATCCGCG 59.580 57.895 0.00 0.00 43.32 6.46
1669 2112 2.264455 AGCCTGTCTTCAATGAGGACT 58.736 47.619 22.89 3.50 39.04 3.85
1716 2159 3.561310 CACTGTGAAAGAGCTGCAACTAA 59.439 43.478 0.32 0.00 0.00 2.24
1779 2222 2.479730 CGGTGTCCCAGATCTAGAAACG 60.480 54.545 0.00 0.00 0.00 3.60
1799 2242 3.798954 GAATCTCTCCTGCCCGGCG 62.799 68.421 4.58 0.00 0.00 6.46
1969 2412 5.235850 TGTACAAGTACAACCATGGTCAT 57.764 39.130 20.07 12.03 42.49 3.06
2057 2500 4.913335 AGAAACATAATGGCAGCATCAG 57.087 40.909 0.00 0.00 0.00 2.90
2140 2583 7.896811 TGCTCTTAAAGAACACATAGAGAGAA 58.103 34.615 0.00 0.00 33.07 2.87
2141 2584 7.468141 TGCTCTTAAAGAACACATAGAGAGA 57.532 36.000 0.00 0.00 33.07 3.10
2142 2585 8.715191 ATTGCTCTTAAAGAACACATAGAGAG 57.285 34.615 0.00 0.00 32.79 3.20
2186 2629 7.698506 ATAACTGCGCCTATATGAGTAGTTA 57.301 36.000 18.31 18.31 34.91 2.24
2308 2751 4.991153 TCGCAGTTCTAGAGATGTTGAT 57.009 40.909 7.78 0.00 0.00 2.57
2328 2771 3.561310 TGATACGCTTTCATTGCTCCATC 59.439 43.478 0.00 0.00 0.00 3.51
2331 2774 4.558538 ATTGATACGCTTTCATTGCTCC 57.441 40.909 0.00 0.00 0.00 4.70
2418 2861 2.671384 TTTTTGCTGTGGGGGAGGGG 62.671 60.000 0.00 0.00 0.00 4.79
2419 2862 1.152355 TTTTTGCTGTGGGGGAGGG 60.152 57.895 0.00 0.00 0.00 4.30
2420 2863 1.187567 CCTTTTTGCTGTGGGGGAGG 61.188 60.000 0.00 0.00 0.00 4.30
2421 2864 0.178964 TCCTTTTTGCTGTGGGGGAG 60.179 55.000 0.00 0.00 0.00 4.30
2422 2865 0.178964 CTCCTTTTTGCTGTGGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
2423 2866 0.469892 ACTCCTTTTTGCTGTGGGGG 60.470 55.000 0.00 0.00 0.00 5.40
2424 2867 1.341209 GAACTCCTTTTTGCTGTGGGG 59.659 52.381 0.00 0.00 0.00 4.96
2425 2868 2.310538 AGAACTCCTTTTTGCTGTGGG 58.689 47.619 0.00 0.00 0.00 4.61
2426 2869 4.391405 AAAGAACTCCTTTTTGCTGTGG 57.609 40.909 0.00 0.00 42.13 4.17
2427 2870 6.377327 TCTAAAGAACTCCTTTTTGCTGTG 57.623 37.500 0.00 0.00 42.13 3.66
2467 2910 5.535030 ACAAAGTTGAGGACCCAAAATAGTC 59.465 40.000 0.00 0.00 0.00 2.59
2510 2953 2.999355 AGCTTCAACGAGATTTGAGAGC 59.001 45.455 0.00 1.43 38.52 4.09
2585 3029 7.255569 CACTAATCAACTAGATCGTGTTACCA 58.744 38.462 0.00 0.00 35.39 3.25
2588 3032 7.096884 AGCACTAATCAACTAGATCGTGTTA 57.903 36.000 0.00 0.00 38.90 2.41
2591 3035 6.036470 TCAAGCACTAATCAACTAGATCGTG 58.964 40.000 0.00 0.00 39.31 4.35
2592 3036 6.208988 TCAAGCACTAATCAACTAGATCGT 57.791 37.500 0.00 0.00 35.39 3.73
2593 3037 7.862873 TGTATCAAGCACTAATCAACTAGATCG 59.137 37.037 0.00 0.00 35.39 3.69
2598 3051 9.098355 GATTGTGTATCAAGCACTAATCAACTA 57.902 33.333 0.00 0.00 41.45 2.24
2631 3084 8.028938 AGCCATAACAGTAAGCAAAACTAAATG 58.971 33.333 0.00 0.00 0.00 2.32
2653 3106 4.032960 ACACCAGAATTATCAACAGCCA 57.967 40.909 0.00 0.00 0.00 4.75
2672 3125 8.574251 AACAATAAATGACCTTGCTACATACA 57.426 30.769 0.00 0.00 0.00 2.29
2831 3287 7.492344 GGGCTTCACATAAAAATCAAATACCTG 59.508 37.037 0.00 0.00 0.00 4.00
2832 3288 7.400052 AGGGCTTCACATAAAAATCAAATACCT 59.600 33.333 0.00 0.00 0.00 3.08
2948 3405 9.678260 AGATAGAAATGATAGTATGGCAAATCC 57.322 33.333 0.00 0.00 0.00 3.01
2966 3423 6.405953 GCTACAGGCACTACAAGAGATAGAAA 60.406 42.308 0.00 0.00 41.35 2.52
3116 3573 2.663826 TGCAACAAAAACTGACCACC 57.336 45.000 0.00 0.00 0.00 4.61
3322 3781 0.392193 GGCTGACTCACATGTCCTGG 60.392 60.000 0.00 0.00 36.21 4.45
3499 3958 0.967380 TTCCGAACGGAGGGAGTACC 60.967 60.000 15.34 0.00 46.06 3.34
3500 3959 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
3501 3960 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3502 3961 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3503 3962 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3505 3964 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3506 3965 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3507 3966 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
3508 3967 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
3509 3968 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
3510 3969 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
3511 3970 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
3514 3973 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
3515 3974 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
3516 3975 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
3517 3976 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
3518 3977 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
3520 3979 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
3521 3980 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
3522 3981 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
3523 3982 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
3524 3983 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
3525 3984 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
3526 3985 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
3527 3986 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
3528 3987 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
3529 3988 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
3543 4002 9.890629 TGTACCTAGACGTATTTTAGTTCTAGA 57.109 33.333 5.67 0.00 0.00 2.43
3546 4005 8.628280 GGATGTACCTAGACGTATTTTAGTTCT 58.372 37.037 0.00 0.00 35.41 3.01
3547 4006 8.408601 TGGATGTACCTAGACGTATTTTAGTTC 58.591 37.037 0.00 0.00 39.86 3.01
3548 4007 8.297470 TGGATGTACCTAGACGTATTTTAGTT 57.703 34.615 0.00 0.00 39.86 2.24
3549 4008 7.886629 TGGATGTACCTAGACGTATTTTAGT 57.113 36.000 0.00 0.00 39.86 2.24
3550 4009 9.760077 AAATGGATGTACCTAGACGTATTTTAG 57.240 33.333 0.00 0.00 39.86 1.85
3552 4011 9.457436 AAAAATGGATGTACCTAGACGTATTTT 57.543 29.630 0.00 0.00 39.86 1.82
3553 4012 8.889717 CAAAAATGGATGTACCTAGACGTATTT 58.110 33.333 0.00 0.00 39.86 1.40
3554 4013 7.012044 GCAAAAATGGATGTACCTAGACGTATT 59.988 37.037 0.00 0.00 39.86 1.89
3555 4014 6.482308 GCAAAAATGGATGTACCTAGACGTAT 59.518 38.462 0.00 0.00 39.86 3.06
3556 4015 5.813672 GCAAAAATGGATGTACCTAGACGTA 59.186 40.000 0.00 0.00 39.86 3.57
3557 4016 4.634443 GCAAAAATGGATGTACCTAGACGT 59.366 41.667 0.00 0.00 39.86 4.34
3558 4017 4.634004 TGCAAAAATGGATGTACCTAGACG 59.366 41.667 0.00 0.00 39.86 4.18
3559 4018 6.072175 TGTTGCAAAAATGGATGTACCTAGAC 60.072 38.462 0.00 0.00 39.86 2.59
3560 4019 6.007076 TGTTGCAAAAATGGATGTACCTAGA 58.993 36.000 0.00 0.00 39.86 2.43
3561 4020 6.266168 TGTTGCAAAAATGGATGTACCTAG 57.734 37.500 0.00 0.00 39.86 3.02
3562 4021 6.266558 ACTTGTTGCAAAAATGGATGTACCTA 59.733 34.615 1.65 0.00 39.86 3.08
3563 4022 5.070313 ACTTGTTGCAAAAATGGATGTACCT 59.930 36.000 1.65 0.00 39.86 3.08
3564 4023 5.296748 ACTTGTTGCAAAAATGGATGTACC 58.703 37.500 1.65 0.00 39.54 3.34
3565 4024 7.938563 TTACTTGTTGCAAAAATGGATGTAC 57.061 32.000 1.65 0.00 0.00 2.90
3566 4025 9.202273 GAATTACTTGTTGCAAAAATGGATGTA 57.798 29.630 1.65 0.00 0.00 2.29
3567 4026 7.173047 GGAATTACTTGTTGCAAAAATGGATGT 59.827 33.333 1.65 0.00 0.00 3.06
3568 4027 7.520686 GGAATTACTTGTTGCAAAAATGGATG 58.479 34.615 1.65 0.00 0.00 3.51
3569 4028 6.368516 CGGAATTACTTGTTGCAAAAATGGAT 59.631 34.615 1.65 0.00 0.00 3.41
3570 4029 5.694006 CGGAATTACTTGTTGCAAAAATGGA 59.306 36.000 1.65 0.00 0.00 3.41
3571 4030 5.694006 TCGGAATTACTTGTTGCAAAAATGG 59.306 36.000 1.65 0.00 0.00 3.16
3572 4031 6.761731 TCGGAATTACTTGTTGCAAAAATG 57.238 33.333 1.65 0.19 0.00 2.32
3573 4032 6.074569 CGTTCGGAATTACTTGTTGCAAAAAT 60.075 34.615 1.65 0.00 0.00 1.82
3574 4033 5.230306 CGTTCGGAATTACTTGTTGCAAAAA 59.770 36.000 0.00 0.00 0.00 1.94
3575 4034 4.735822 CGTTCGGAATTACTTGTTGCAAAA 59.264 37.500 0.00 0.00 0.00 2.44
3576 4035 4.283678 CGTTCGGAATTACTTGTTGCAAA 58.716 39.130 0.00 0.00 0.00 3.68
3577 4036 3.304123 CCGTTCGGAATTACTTGTTGCAA 60.304 43.478 5.19 0.00 0.00 4.08
3578 4037 2.224549 CCGTTCGGAATTACTTGTTGCA 59.775 45.455 5.19 0.00 0.00 4.08
3579 4038 2.481185 TCCGTTCGGAATTACTTGTTGC 59.519 45.455 11.66 0.00 0.00 4.17
3580 4039 3.124636 CCTCCGTTCGGAATTACTTGTTG 59.875 47.826 14.79 0.00 33.41 3.33
3581 4040 3.332034 CCTCCGTTCGGAATTACTTGTT 58.668 45.455 14.79 0.00 33.41 2.83
3582 4041 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3583 4042 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3584 4043 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3585 4044 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3586 4045 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3587 4046 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3588 4047 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
3589 4048 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
3590 4049 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
3591 4050 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
3592 4051 0.172803 CAACTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
3593 4052 0.886563 ACAACTACTCCCTCCGTTCG 59.113 55.000 0.00 0.00 0.00 3.95
3594 4053 3.397849 AAACAACTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
3595 4054 3.642848 TGTAAACAACTACTCCCTCCGTT 59.357 43.478 0.00 0.00 0.00 4.44
3596 4055 3.233507 TGTAAACAACTACTCCCTCCGT 58.766 45.455 0.00 0.00 0.00 4.69
3597 4056 3.947910 TGTAAACAACTACTCCCTCCG 57.052 47.619 0.00 0.00 0.00 4.63
3598 4057 5.416271 TCATGTAAACAACTACTCCCTCC 57.584 43.478 0.00 0.00 0.00 4.30
3599 4058 7.923414 AATTCATGTAAACAACTACTCCCTC 57.077 36.000 0.00 0.00 0.00 4.30
3600 4059 8.603304 AGTAATTCATGTAAACAACTACTCCCT 58.397 33.333 0.00 0.00 0.00 4.20
3601 4060 8.788325 AGTAATTCATGTAAACAACTACTCCC 57.212 34.615 0.00 0.00 0.00 4.30
3607 4066 8.495949 CGAGACAAGTAATTCATGTAAACAACT 58.504 33.333 0.00 0.00 0.00 3.16
3608 4067 7.744715 CCGAGACAAGTAATTCATGTAAACAAC 59.255 37.037 0.00 0.00 0.00 3.32
3609 4068 7.658167 TCCGAGACAAGTAATTCATGTAAACAA 59.342 33.333 0.00 0.00 0.00 2.83
3610 4069 7.156000 TCCGAGACAAGTAATTCATGTAAACA 58.844 34.615 0.00 0.00 0.00 2.83
3611 4070 7.591006 TCCGAGACAAGTAATTCATGTAAAC 57.409 36.000 0.00 0.00 0.00 2.01
3612 4071 8.610248 TTTCCGAGACAAGTAATTCATGTAAA 57.390 30.769 0.00 0.00 0.00 2.01
3613 4072 8.664798 CATTTCCGAGACAAGTAATTCATGTAA 58.335 33.333 0.00 0.00 0.00 2.41
3614 4073 7.279981 CCATTTCCGAGACAAGTAATTCATGTA 59.720 37.037 0.00 0.00 0.00 2.29
3615 4074 6.094048 CCATTTCCGAGACAAGTAATTCATGT 59.906 38.462 0.00 0.00 0.00 3.21
3616 4075 6.316140 TCCATTTCCGAGACAAGTAATTCATG 59.684 38.462 0.00 0.00 0.00 3.07
3617 4076 6.414732 TCCATTTCCGAGACAAGTAATTCAT 58.585 36.000 0.00 0.00 0.00 2.57
3618 4077 5.800296 TCCATTTCCGAGACAAGTAATTCA 58.200 37.500 0.00 0.00 0.00 2.57
3619 4078 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
3620 4079 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
3621 4080 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
3622 4081 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
3623 4082 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
3624 4083 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
3625 4084 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
3626 4085 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
3627 4086 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
3628 4087 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
3629 4088 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
3630 4089 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
3631 4090 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
3632 4091 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
3646 4105 9.890629 TGTACCTAGACGTATTTTAGTTCTAGA 57.109 33.333 5.67 0.00 0.00 2.43
3649 4108 8.628280 GGATGTACCTAGACGTATTTTAGTTCT 58.372 37.037 0.00 0.00 35.41 3.01
3650 4109 8.408601 TGGATGTACCTAGACGTATTTTAGTTC 58.591 37.037 0.00 0.00 39.86 3.01
3651 4110 8.297470 TGGATGTACCTAGACGTATTTTAGTT 57.703 34.615 0.00 0.00 39.86 2.24
3652 4111 7.886629 TGGATGTACCTAGACGTATTTTAGT 57.113 36.000 0.00 0.00 39.86 2.24
3653 4112 9.760077 AAATGGATGTACCTAGACGTATTTTAG 57.240 33.333 0.00 0.00 39.86 1.85
3655 4114 9.457436 AAAAATGGATGTACCTAGACGTATTTT 57.543 29.630 0.00 0.00 39.86 1.82
3656 4115 8.889717 CAAAAATGGATGTACCTAGACGTATTT 58.110 33.333 0.00 0.00 39.86 1.40
3657 4116 7.012044 GCAAAAATGGATGTACCTAGACGTATT 59.988 37.037 0.00 0.00 39.86 1.89
3658 4117 6.482308 GCAAAAATGGATGTACCTAGACGTAT 59.518 38.462 0.00 0.00 39.86 3.06
3659 4118 5.813672 GCAAAAATGGATGTACCTAGACGTA 59.186 40.000 0.00 0.00 39.86 3.57
3660 4119 4.634443 GCAAAAATGGATGTACCTAGACGT 59.366 41.667 0.00 0.00 39.86 4.34
3661 4120 4.634004 TGCAAAAATGGATGTACCTAGACG 59.366 41.667 0.00 0.00 39.86 4.18
3662 4121 6.072175 TGTTGCAAAAATGGATGTACCTAGAC 60.072 38.462 0.00 0.00 39.86 2.59
3663 4122 6.007076 TGTTGCAAAAATGGATGTACCTAGA 58.993 36.000 0.00 0.00 39.86 2.43
3664 4123 6.266168 TGTTGCAAAAATGGATGTACCTAG 57.734 37.500 0.00 0.00 39.86 3.02
3665 4124 6.266558 ACTTGTTGCAAAAATGGATGTACCTA 59.733 34.615 1.65 0.00 39.86 3.08
3666 4125 5.070313 ACTTGTTGCAAAAATGGATGTACCT 59.930 36.000 1.65 0.00 39.86 3.08
3667 4126 5.296748 ACTTGTTGCAAAAATGGATGTACC 58.703 37.500 1.65 0.00 39.54 3.34
3668 4127 7.938563 TTACTTGTTGCAAAAATGGATGTAC 57.061 32.000 1.65 0.00 0.00 2.90
3669 4128 9.202273 GAATTACTTGTTGCAAAAATGGATGTA 57.798 29.630 1.65 0.00 0.00 2.29
3670 4129 7.173047 GGAATTACTTGTTGCAAAAATGGATGT 59.827 33.333 1.65 0.00 0.00 3.06
3671 4130 7.520686 GGAATTACTTGTTGCAAAAATGGATG 58.479 34.615 1.65 0.00 0.00 3.51
3672 4131 6.368516 CGGAATTACTTGTTGCAAAAATGGAT 59.631 34.615 1.65 0.00 0.00 3.41
3673 4132 5.694006 CGGAATTACTTGTTGCAAAAATGGA 59.306 36.000 1.65 0.00 0.00 3.41
3674 4133 5.694006 TCGGAATTACTTGTTGCAAAAATGG 59.306 36.000 1.65 0.00 0.00 3.16
3675 4134 6.761731 TCGGAATTACTTGTTGCAAAAATG 57.238 33.333 1.65 0.19 0.00 2.32
3676 4135 6.074569 CGTTCGGAATTACTTGTTGCAAAAAT 60.075 34.615 1.65 0.00 0.00 1.82
3677 4136 5.230306 CGTTCGGAATTACTTGTTGCAAAAA 59.770 36.000 0.00 0.00 0.00 1.94
3678 4137 4.735822 CGTTCGGAATTACTTGTTGCAAAA 59.264 37.500 0.00 0.00 0.00 2.44
3679 4138 4.283678 CGTTCGGAATTACTTGTTGCAAA 58.716 39.130 0.00 0.00 0.00 3.68
3680 4139 3.304123 CCGTTCGGAATTACTTGTTGCAA 60.304 43.478 5.19 0.00 0.00 4.08
3681 4140 2.224549 CCGTTCGGAATTACTTGTTGCA 59.775 45.455 5.19 0.00 0.00 4.08
3682 4141 2.481185 TCCGTTCGGAATTACTTGTTGC 59.519 45.455 11.66 0.00 0.00 4.17
3683 4142 3.124636 CCTCCGTTCGGAATTACTTGTTG 59.875 47.826 14.79 0.00 33.41 3.33
3684 4143 3.332034 CCTCCGTTCGGAATTACTTGTT 58.668 45.455 14.79 0.00 33.41 2.83
3685 4144 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3686 4145 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3687 4146 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3688 4147 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3689 4148 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3690 4149 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3691 4150 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
3692 4151 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
3693 4152 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
3694 4153 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
3695 4154 0.172803 CAACTACTCCCTCCGTTCGG 59.827 60.000 4.74 4.74 0.00 4.30
3696 4155 0.886563 ACAACTACTCCCTCCGTTCG 59.113 55.000 0.00 0.00 0.00 3.95
3697 4156 3.397849 AAACAACTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
3698 4157 3.642848 TGTAAACAACTACTCCCTCCGTT 59.357 43.478 0.00 0.00 0.00 4.44
3699 4158 3.233507 TGTAAACAACTACTCCCTCCGT 58.766 45.455 0.00 0.00 0.00 4.69
3700 4159 3.947910 TGTAAACAACTACTCCCTCCG 57.052 47.619 0.00 0.00 0.00 4.63
3701 4160 5.161943 ACATGTAAACAACTACTCCCTCC 57.838 43.478 0.00 0.00 0.00 4.30
3702 4161 5.046520 AGGACATGTAAACAACTACTCCCTC 60.047 44.000 0.00 0.00 0.00 4.30
3703 4162 4.844655 AGGACATGTAAACAACTACTCCCT 59.155 41.667 0.00 0.00 0.00 4.20
3704 4163 4.935808 CAGGACATGTAAACAACTACTCCC 59.064 45.833 0.00 0.00 0.00 4.30
3705 4164 5.408604 CACAGGACATGTAAACAACTACTCC 59.591 44.000 0.00 0.00 41.41 3.85
3706 4165 5.989777 ACACAGGACATGTAAACAACTACTC 59.010 40.000 0.00 0.00 41.41 2.59
3707 4166 5.925509 ACACAGGACATGTAAACAACTACT 58.074 37.500 0.00 0.00 41.41 2.57
3708 4167 7.718272 TTACACAGGACATGTAAACAACTAC 57.282 36.000 0.00 0.00 41.41 2.73
3709 4168 7.956420 CTTACACAGGACATGTAAACAACTA 57.044 36.000 0.00 0.00 41.41 2.24
3710 4169 6.861065 CTTACACAGGACATGTAAACAACT 57.139 37.500 0.00 0.00 41.41 3.16
3745 4204 8.997621 ACGCAATCATACTAAAAGACTTAAGA 57.002 30.769 10.09 0.00 0.00 2.10
3752 4211 7.764443 AGAAGCTTACGCAATCATACTAAAAGA 59.236 33.333 0.00 0.00 39.10 2.52
3753 4212 7.848051 CAGAAGCTTACGCAATCATACTAAAAG 59.152 37.037 0.00 0.00 39.10 2.27
3765 4224 4.566004 AGTATGAACAGAAGCTTACGCAA 58.434 39.130 0.00 0.00 39.10 4.85
3767 4226 4.389077 ACAAGTATGAACAGAAGCTTACGC 59.611 41.667 0.00 0.00 0.00 4.42
3768 4227 5.062308 GGACAAGTATGAACAGAAGCTTACG 59.938 44.000 0.00 0.00 0.00 3.18
3769 4228 5.932303 TGGACAAGTATGAACAGAAGCTTAC 59.068 40.000 0.00 0.00 0.00 2.34
3817 4276 2.416836 GCACATTGACAGTCCTAGCGTA 60.417 50.000 0.00 0.00 0.00 4.42
3824 4283 2.153645 TGTCATGCACATTGACAGTCC 58.846 47.619 15.85 0.00 37.61 3.85
3829 4288 2.082231 AGAGCTGTCATGCACATTGAC 58.918 47.619 11.24 11.24 33.23 3.18
3853 4312 9.533253 CAAAAGATCAACAAAATAGTGTTTCCT 57.467 29.630 0.00 0.00 39.73 3.36
3907 4366 2.620585 GCCATCTTAGGAACAATCTGCC 59.379 50.000 0.00 0.00 0.00 4.85
3909 4368 3.310774 CGTGCCATCTTAGGAACAATCTG 59.689 47.826 0.00 0.00 37.00 2.90
3916 4375 1.403647 CGTGACGTGCCATCTTAGGAA 60.404 52.381 0.00 0.00 0.00 3.36
3948 4407 6.899393 TTGTTAGATTTCAAAGAGGTGCAT 57.101 33.333 0.00 0.00 0.00 3.96
3953 4412 9.565213 CAAGCTAATTGTTAGATTTCAAAGAGG 57.435 33.333 1.10 0.00 39.64 3.69
3981 4440 6.817184 CCTAGCTAGAGGTGCACTAATAAAA 58.183 40.000 22.70 0.00 0.00 1.52
4000 4459 5.967088 TGTTCTATCTCTGTTGAACCTAGC 58.033 41.667 0.00 0.00 38.29 3.42
4159 4619 4.787598 CAAAATCTGGAAGGACAAAGACG 58.212 43.478 0.00 0.00 0.00 4.18
4195 4655 9.736023 CCCAGCATCACTTAAAAAGAATAATAC 57.264 33.333 0.00 0.00 0.00 1.89
4318 4778 2.760650 TGCTCATCAGTACTCCGTGAAT 59.239 45.455 0.00 0.00 0.00 2.57
4323 4783 0.249238 GGCTGCTCATCAGTACTCCG 60.249 60.000 0.00 0.00 44.66 4.63
4439 4899 5.585047 ACGCTTTGGAGATCAATAAGTTACC 59.415 40.000 0.00 0.00 34.98 2.85
4497 4957 8.250332 TCAATCTAGCAAAATATTCCCAAACAC 58.750 33.333 0.00 0.00 0.00 3.32
4517 4977 7.601856 TGCCGAGTATTTCAAATTTTCAATCT 58.398 30.769 0.00 0.00 0.00 2.40
4591 5055 4.333690 ACTACCATAGAAGACGACACAGT 58.666 43.478 0.00 0.00 0.00 3.55
4662 5126 4.320456 CAGAGGGCACACGCAGGT 62.320 66.667 0.00 0.00 41.24 4.00
4678 5142 2.349755 GGGAGCGTACCCTTTGCA 59.650 61.111 10.93 0.00 45.90 4.08
4703 5167 3.664486 CGTAATATCTCGAAAGGCACTCG 59.336 47.826 2.19 2.19 38.49 4.18
4732 5196 8.426489 AGCCTACCAATACGTCTTATATTTTGA 58.574 33.333 0.00 0.00 0.00 2.69
4733 5197 8.603242 AGCCTACCAATACGTCTTATATTTTG 57.397 34.615 0.00 0.00 0.00 2.44
4740 5204 9.135189 TCTAAAATAGCCTACCAATACGTCTTA 57.865 33.333 0.00 0.00 0.00 2.10
4741 5205 8.015185 TCTAAAATAGCCTACCAATACGTCTT 57.985 34.615 0.00 0.00 0.00 3.01
4742 5206 7.592885 TCTAAAATAGCCTACCAATACGTCT 57.407 36.000 0.00 0.00 0.00 4.18
4769 5233 8.829612 GCTAAAATGGCCTACTAATACGTTTTA 58.170 33.333 3.32 0.00 33.70 1.52
4770 5234 7.201758 GGCTAAAATGGCCTACTAATACGTTTT 60.202 37.037 3.32 0.00 45.57 2.43
4772 5236 5.761726 GGCTAAAATGGCCTACTAATACGTT 59.238 40.000 3.32 0.00 45.57 3.99
4773 5237 5.303165 GGCTAAAATGGCCTACTAATACGT 58.697 41.667 3.32 0.00 45.57 3.57
4774 5238 5.857822 GGCTAAAATGGCCTACTAATACG 57.142 43.478 3.32 0.00 45.57 3.06
4799 5263 8.100164 CCCCATACCAAAACATAAGACATTTTT 58.900 33.333 0.00 0.00 0.00 1.94
4800 5264 7.236640 ACCCCATACCAAAACATAAGACATTTT 59.763 33.333 0.00 0.00 0.00 1.82
4801 5265 6.728632 ACCCCATACCAAAACATAAGACATTT 59.271 34.615 0.00 0.00 0.00 2.32
4804 5268 5.263872 ACCCCATACCAAAACATAAGACA 57.736 39.130 0.00 0.00 0.00 3.41
4805 5269 6.420638 ACTACCCCATACCAAAACATAAGAC 58.579 40.000 0.00 0.00 0.00 3.01
4806 5270 6.645884 ACTACCCCATACCAAAACATAAGA 57.354 37.500 0.00 0.00 0.00 2.10
4807 5271 9.498176 GTATACTACCCCATACCAAAACATAAG 57.502 37.037 0.00 0.00 0.00 1.73
4809 5273 8.802057 AGTATACTACCCCATACCAAAACATA 57.198 34.615 2.75 0.00 0.00 2.29
4810 5274 7.701257 AGTATACTACCCCATACCAAAACAT 57.299 36.000 2.75 0.00 0.00 2.71
4812 5276 9.330063 GTTTAGTATACTACCCCATACCAAAAC 57.670 37.037 12.25 7.70 32.63 2.43
4814 5278 8.858944 AGTTTAGTATACTACCCCATACCAAA 57.141 34.615 12.25 0.00 0.00 3.28
4818 5282 9.799106 TCTGTAGTTTAGTATACTACCCCATAC 57.201 37.037 21.20 11.00 44.65 2.39
4835 5299 9.787435 TGGAAACATGTTTACTATCTGTAGTTT 57.213 29.630 29.14 1.76 37.64 2.66
4836 5300 9.436957 CTGGAAACATGTTTACTATCTGTAGTT 57.563 33.333 29.14 2.41 39.97 2.24
4837 5301 7.549488 GCTGGAAACATGTTTACTATCTGTAGT 59.451 37.037 29.14 2.85 41.40 2.73
4839 5303 7.333423 GTGCTGGAAACATGTTTACTATCTGTA 59.667 37.037 29.14 10.46 41.51 2.74
4840 5304 6.149474 GTGCTGGAAACATGTTTACTATCTGT 59.851 38.462 29.14 4.30 41.51 3.41
4841 5305 6.149308 TGTGCTGGAAACATGTTTACTATCTG 59.851 38.462 29.14 16.65 41.51 2.90
4842 5306 6.237901 TGTGCTGGAAACATGTTTACTATCT 58.762 36.000 29.14 5.77 41.51 1.98
4843 5307 6.494893 TGTGCTGGAAACATGTTTACTATC 57.505 37.500 29.14 19.26 41.51 2.08
4844 5308 6.892658 TTGTGCTGGAAACATGTTTACTAT 57.107 33.333 29.14 7.24 41.51 2.12
4846 5310 5.789643 ATTGTGCTGGAAACATGTTTACT 57.210 34.783 29.14 8.00 41.51 2.24
4847 5311 5.752955 ACAATTGTGCTGGAAACATGTTTAC 59.247 36.000 24.18 24.18 41.51 2.01
4848 5312 5.752472 CACAATTGTGCTGGAAACATGTTTA 59.248 36.000 24.69 8.62 39.39 2.01
4850 5314 4.121317 CACAATTGTGCTGGAAACATGTT 58.879 39.130 24.69 4.92 39.39 2.71
4852 5316 3.979948 TCACAATTGTGCTGGAAACATG 58.020 40.909 29.84 5.89 45.25 3.21
4853 5317 3.006110 CCTCACAATTGTGCTGGAAACAT 59.994 43.478 30.09 0.00 45.25 2.71
4856 5320 1.962807 CCCTCACAATTGTGCTGGAAA 59.037 47.619 32.94 18.46 45.25 3.13
4857 5321 1.144708 TCCCTCACAATTGTGCTGGAA 59.855 47.619 32.94 21.48 45.25 3.53
4858 5322 0.770499 TCCCTCACAATTGTGCTGGA 59.230 50.000 32.94 31.40 45.25 3.86
4860 5324 4.201657 TCATATCCCTCACAATTGTGCTG 58.798 43.478 29.84 23.35 45.25 4.41
4861 5325 4.508551 TCATATCCCTCACAATTGTGCT 57.491 40.909 29.84 15.33 45.25 4.40
4865 5329 4.217767 CCAGCATCATATCCCTCACAATTG 59.782 45.833 3.24 3.24 0.00 2.32
4866 5330 4.141088 ACCAGCATCATATCCCTCACAATT 60.141 41.667 0.00 0.00 0.00 2.32
4867 5331 3.396946 ACCAGCATCATATCCCTCACAAT 59.603 43.478 0.00 0.00 0.00 2.71
4868 5332 2.779430 ACCAGCATCATATCCCTCACAA 59.221 45.455 0.00 0.00 0.00 3.33
4869 5333 2.411583 ACCAGCATCATATCCCTCACA 58.588 47.619 0.00 0.00 0.00 3.58
4870 5334 3.072184 AGAACCAGCATCATATCCCTCAC 59.928 47.826 0.00 0.00 0.00 3.51
4871 5335 3.321039 AGAACCAGCATCATATCCCTCA 58.679 45.455 0.00 0.00 0.00 3.86
4873 5337 3.596101 AGAGAACCAGCATCATATCCCT 58.404 45.455 0.00 0.00 0.00 4.20
4874 5338 4.041444 AGAAGAGAACCAGCATCATATCCC 59.959 45.833 0.00 0.00 0.00 3.85
4876 5340 6.286758 TCAAGAAGAGAACCAGCATCATATC 58.713 40.000 0.00 0.00 0.00 1.63
4877 5341 6.244552 TCAAGAAGAGAACCAGCATCATAT 57.755 37.500 0.00 0.00 0.00 1.78
4878 5342 5.682234 TCAAGAAGAGAACCAGCATCATA 57.318 39.130 0.00 0.00 0.00 2.15
4881 5345 5.893897 ATTTCAAGAAGAGAACCAGCATC 57.106 39.130 0.00 0.00 0.00 3.91
4882 5346 6.661304 AAATTTCAAGAAGAGAACCAGCAT 57.339 33.333 0.00 0.00 0.00 3.79
4883 5347 6.469782 AAAATTTCAAGAAGAGAACCAGCA 57.530 33.333 0.00 0.00 0.00 4.41
4884 5348 6.584184 GCTAAAATTTCAAGAAGAGAACCAGC 59.416 38.462 5.01 0.00 0.00 4.85
4886 5350 6.549364 TGGCTAAAATTTCAAGAAGAGAACCA 59.451 34.615 5.01 0.00 0.00 3.67
4887 5351 6.981722 TGGCTAAAATTTCAAGAAGAGAACC 58.018 36.000 5.01 0.00 0.00 3.62
4888 5352 8.138074 AGTTGGCTAAAATTTCAAGAAGAGAAC 58.862 33.333 5.01 0.00 0.00 3.01
4889 5353 8.237811 AGTTGGCTAAAATTTCAAGAAGAGAA 57.762 30.769 5.01 0.00 0.00 2.87
4890 5354 7.823745 AGTTGGCTAAAATTTCAAGAAGAGA 57.176 32.000 5.01 0.00 0.00 3.10
4898 5362 9.528489 AGGTCTTATTAGTTGGCTAAAATTTCA 57.472 29.630 0.00 0.00 40.22 2.69
4901 5365 9.404848 GGTAGGTCTTATTAGTTGGCTAAAATT 57.595 33.333 0.00 0.00 40.22 1.82
4902 5366 8.554011 TGGTAGGTCTTATTAGTTGGCTAAAAT 58.446 33.333 0.00 0.00 40.22 1.82
4903 5367 7.920227 TGGTAGGTCTTATTAGTTGGCTAAAA 58.080 34.615 0.00 0.00 40.22 1.52
4904 5368 7.499200 TGGTAGGTCTTATTAGTTGGCTAAA 57.501 36.000 0.00 0.00 40.22 1.85
4905 5369 6.407752 GCTGGTAGGTCTTATTAGTTGGCTAA 60.408 42.308 0.00 0.00 40.98 3.09
4907 5371 4.141688 GCTGGTAGGTCTTATTAGTTGGCT 60.142 45.833 0.00 0.00 0.00 4.75
4908 5372 4.127907 GCTGGTAGGTCTTATTAGTTGGC 58.872 47.826 0.00 0.00 0.00 4.52
4942 6289 6.942532 AACAAGCTAAAGTCATCACAGAAA 57.057 33.333 0.00 0.00 0.00 2.52
4945 6292 6.634436 GTCAAAACAAGCTAAAGTCATCACAG 59.366 38.462 0.00 0.00 0.00 3.66
4947 6294 5.915196 GGTCAAAACAAGCTAAAGTCATCAC 59.085 40.000 0.00 0.00 0.00 3.06
4949 6296 6.072112 TGGTCAAAACAAGCTAAAGTCATC 57.928 37.500 0.00 0.00 0.00 2.92
4950 6297 6.463995 TTGGTCAAAACAAGCTAAAGTCAT 57.536 33.333 0.00 0.00 0.00 3.06
4952 6299 6.503524 TCATTGGTCAAAACAAGCTAAAGTC 58.496 36.000 0.00 0.00 0.00 3.01
4953 6300 6.463995 TCATTGGTCAAAACAAGCTAAAGT 57.536 33.333 0.00 0.00 0.00 2.66
4954 6301 8.299570 AGTATCATTGGTCAAAACAAGCTAAAG 58.700 33.333 0.00 0.00 0.00 1.85
4955 6302 8.177119 AGTATCATTGGTCAAAACAAGCTAAA 57.823 30.769 0.00 0.00 0.00 1.85
4956 6303 7.446931 TGAGTATCATTGGTCAAAACAAGCTAA 59.553 33.333 0.00 0.00 42.56 3.09
4957 6304 6.939730 TGAGTATCATTGGTCAAAACAAGCTA 59.060 34.615 0.00 0.00 42.56 3.32
4959 6306 6.012658 TGAGTATCATTGGTCAAAACAAGC 57.987 37.500 0.00 0.00 42.56 4.01
4988 6341 2.344093 ATATTATGGGCGGAGGGAGT 57.656 50.000 0.00 0.00 0.00 3.85
4991 6344 5.602978 ACTATCTTATATTATGGGCGGAGGG 59.397 44.000 0.00 0.00 0.00 4.30
4994 6347 9.444600 GAAAAACTATCTTATATTATGGGCGGA 57.555 33.333 0.00 0.00 0.00 5.54
5020 6374 8.621532 AGAGCAAGTAGATACTCTCTAATGAG 57.378 38.462 8.66 0.00 38.20 2.90
5028 6382 5.534654 GTGGATGAGAGCAAGTAGATACTCT 59.465 44.000 0.00 0.00 42.08 3.24
5065 6440 8.076178 TGCAGCAAATAGAAAGAAAAACTAGAC 58.924 33.333 0.00 0.00 0.00 2.59
5067 6442 8.976986 ATGCAGCAAATAGAAAGAAAAACTAG 57.023 30.769 0.00 0.00 0.00 2.57
5078 6456 8.292444 ACCAAGTAATAATGCAGCAAATAGAA 57.708 30.769 0.00 0.00 0.00 2.10
5093 6471 4.998672 CACCGAGTTTTGGACCAAGTAATA 59.001 41.667 7.07 0.00 0.00 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.