Multiple sequence alignment - TraesCS3B01G273600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G273600 chr3B 100.000 4030 0 0 3045 7074 440518589 440514560 0.000000e+00 7443.0
1 TraesCS3B01G273600 chr3B 100.000 2700 0 0 1 2700 440521633 440518934 0.000000e+00 4987.0
2 TraesCS3B01G273600 chr3B 77.358 318 47 21 4525 4824 694172881 694173191 1.580000e-36 165.0
3 TraesCS3B01G273600 chr3B 97.059 34 1 0 5546 5579 719186290 719186323 2.760000e-04 58.4
4 TraesCS3B01G273600 chr3D 92.209 3363 170 38 3047 6362 341679717 341676400 0.000000e+00 4674.0
5 TraesCS3B01G273600 chr3D 94.362 2767 76 25 1 2700 341682610 341679857 0.000000e+00 4172.0
6 TraesCS3B01G273600 chr3D 87.225 227 13 6 6666 6892 341676412 341676202 1.970000e-60 244.0
7 TraesCS3B01G273600 chr3A 94.964 1807 33 18 1 1771 461387945 461389729 0.000000e+00 2780.0
8 TraesCS3B01G273600 chr3A 90.576 1963 142 23 3047 4979 461391282 461393231 0.000000e+00 2560.0
9 TraesCS3B01G273600 chr3A 96.417 1200 35 3 5167 6359 461393548 461394746 0.000000e+00 1971.0
10 TraesCS3B01G273600 chr3A 90.797 891 26 11 1857 2700 461389877 461390758 0.000000e+00 1140.0
11 TraesCS3B01G273600 chr3A 87.762 286 21 2 6666 6951 461394737 461395008 8.850000e-84 322.0
12 TraesCS3B01G273600 chr3A 80.000 250 39 11 4518 4758 62257863 62258110 2.620000e-39 174.0
13 TraesCS3B01G273600 chr3A 89.855 138 5 4 1799 1928 461389722 461389858 1.220000e-37 169.0
14 TraesCS3B01G273600 chr6B 95.161 310 15 0 6358 6667 551769912 551770221 2.290000e-134 490.0
15 TraesCS3B01G273600 chr6B 94.268 314 16 2 6361 6674 634640629 634640318 4.960000e-131 479.0
16 TraesCS3B01G273600 chr6B 79.026 267 46 10 4518 4775 696512922 696513187 2.620000e-39 174.0
17 TraesCS3B01G273600 chr6B 76.923 325 54 19 4513 4824 118185046 118185362 1.580000e-36 165.0
18 TraesCS3B01G273600 chr6A 95.425 306 14 0 6361 6666 584038443 584038748 8.250000e-134 488.0
19 TraesCS3B01G273600 chr4A 95.410 305 14 0 6361 6665 11180474 11180778 2.970000e-133 486.0
20 TraesCS3B01G273600 chr2A 95.114 307 15 0 6361 6667 30175256 30175562 1.070000e-132 484.0
21 TraesCS3B01G273600 chr2A 78.495 93 20 0 5546 5638 469286944 469286852 2.130000e-05 62.1
22 TraesCS3B01G273600 chr4B 94.839 310 15 1 6356 6665 40215224 40215532 3.840000e-132 483.0
23 TraesCS3B01G273600 chr2B 94.025 318 18 1 6361 6678 389457231 389456915 1.380000e-131 481.0
24 TraesCS3B01G273600 chr2B 94.268 314 17 1 6355 6667 798371948 798371635 4.960000e-131 479.0
25 TraesCS3B01G273600 chr2B 90.400 125 11 1 6951 7074 159364360 159364236 5.680000e-36 163.0
26 TraesCS3B01G273600 chr7A 93.519 324 18 3 6348 6669 727101263 727101585 4.960000e-131 479.0
27 TraesCS3B01G273600 chr7A 91.200 125 9 2 6952 7074 285605656 285605780 1.220000e-37 169.0
28 TraesCS3B01G273600 chr1D 82.963 270 32 14 4518 4776 249582328 249582594 1.530000e-56 231.0
29 TraesCS3B01G273600 chr1D 92.742 124 8 1 6952 7074 470417806 470417929 2.030000e-40 178.0
30 TraesCS3B01G273600 chr7D 81.588 277 36 15 4513 4775 398816149 398815874 1.550000e-51 215.0
31 TraesCS3B01G273600 chr7D 94.355 124 6 1 6952 7074 579747466 579747589 9.370000e-44 189.0
32 TraesCS3B01G273600 chr5D 94.262 122 6 1 6954 7074 529256577 529256456 1.210000e-42 185.0
33 TraesCS3B01G273600 chr1A 82.174 230 25 14 4523 4742 52215269 52215492 4.360000e-42 183.0
34 TraesCS3B01G273600 chr5B 92.683 123 8 1 6953 7074 339291777 339291899 7.290000e-40 176.0
35 TraesCS3B01G273600 chr5B 91.870 123 9 1 6953 7074 393983856 393983734 3.390000e-38 171.0
36 TraesCS3B01G273600 chr5A 91.935 124 9 1 6952 7074 623678814 623678691 9.430000e-39 172.0
37 TraesCS3B01G273600 chr1B 90.769 130 10 2 6946 7073 544761405 544761276 9.430000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G273600 chr3B 440514560 440521633 7073 True 6215.000000 7443 100.000000 1 7074 2 chr3B.!!$R1 7073
1 TraesCS3B01G273600 chr3D 341676202 341682610 6408 True 3030.000000 4674 91.265333 1 6892 3 chr3D.!!$R1 6891
2 TraesCS3B01G273600 chr3A 461387945 461395008 7063 False 1490.333333 2780 91.728500 1 6951 6 chr3A.!!$F2 6950

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
596 619 1.299468 GCTCGTGGCGATCGATCTT 60.299 57.895 21.57 0.00 36.73 2.40 F
1243 1280 0.528033 CCTGAGTGAGATCGCAGCAG 60.528 60.000 17.15 17.15 34.73 4.24 F
1869 1922 0.405198 TCCTTGCCCTTGCTTGATCA 59.595 50.000 0.00 0.00 38.71 2.92 F
1870 1923 1.203038 TCCTTGCCCTTGCTTGATCAA 60.203 47.619 8.12 8.12 38.71 2.57 F
3842 4229 1.207089 TCTGGCGGACGATGATTTCTT 59.793 47.619 0.00 0.00 0.00 2.52 F
3913 4301 0.095935 CGGCTCAGAAATTGACTGCG 59.904 55.000 7.71 4.06 35.61 5.18 F
5713 6329 0.884704 ACGGCGGGCAATATCATCAC 60.885 55.000 13.24 0.00 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1568 1609 1.593787 CAGAGACTCACATGGCGGT 59.406 57.895 5.02 0.0 0.00 5.68 R
2324 2501 4.023193 GGGTAAAGATAATGCATTCCCGTG 60.023 45.833 16.86 0.0 0.00 4.94 R
3773 4159 1.065854 CCTTGTCCAGGGCACTCTTAG 60.066 57.143 0.00 0.0 39.39 2.18 R
3849 4236 6.535274 GCAGAATTGCTTGTTTTGAGAATT 57.465 33.333 0.00 0.0 46.95 2.17 R
5831 6447 0.899019 TGCTGTACCCGATTAGTGCA 59.101 50.000 0.00 0.0 0.00 4.57 R
5894 6510 0.800631 TCAAATGAGCAGAAGCAGCG 59.199 50.000 0.00 0.0 45.49 5.18 R
6585 7208 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.0 0.00 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 100 2.555325 ACGTCAACAACTACTCGATGGA 59.445 45.455 0.00 0.00 0.00 3.41
484 495 1.643868 TTGCTTGCGCGAATTCCGAT 61.644 50.000 12.10 0.00 41.76 4.18
511 522 8.415950 TCTTTATTAATTTCTCCTTTGTGCCA 57.584 30.769 0.00 0.00 0.00 4.92
513 524 5.665916 ATTAATTTCTCCTTTGTGCCAGG 57.334 39.130 0.00 0.00 0.00 4.45
596 619 1.299468 GCTCGTGGCGATCGATCTT 60.299 57.895 21.57 0.00 36.73 2.40
667 697 3.069443 CCAGATAGAGAGAGAAACCCAGC 59.931 52.174 0.00 0.00 0.00 4.85
1205 1242 2.670934 CTCCTGCACGCCAGCTTT 60.671 61.111 0.00 0.00 40.36 3.51
1208 1245 2.263741 CCTGCACGCCAGCTTTCTT 61.264 57.895 0.00 0.00 40.36 2.52
1210 1247 0.662374 CTGCACGCCAGCTTTCTTTG 60.662 55.000 0.00 0.00 34.21 2.77
1212 1249 1.656441 CACGCCAGCTTTCTTTGCT 59.344 52.632 0.00 0.00 42.06 3.91
1224 1261 1.512926 TCTTTGCTGTTTCTCCGAGC 58.487 50.000 0.00 0.00 0.00 5.03
1243 1280 0.528033 CCTGAGTGAGATCGCAGCAG 60.528 60.000 17.15 17.15 34.73 4.24
1260 1297 5.110598 GCAGCAGGACTATATGATGATCAG 58.889 45.833 0.09 0.00 34.82 2.90
1261 1298 5.337410 GCAGCAGGACTATATGATGATCAGT 60.337 44.000 0.09 0.00 34.82 3.41
1262 1299 6.699366 CAGCAGGACTATATGATGATCAGTT 58.301 40.000 0.09 0.00 34.82 3.16
1263 1300 7.578380 GCAGCAGGACTATATGATGATCAGTTA 60.578 40.741 0.09 0.00 34.82 2.24
1264 1301 8.476447 CAGCAGGACTATATGATGATCAGTTAT 58.524 37.037 0.09 0.00 34.82 1.89
1425 1462 3.036429 AAGCTCCACCCGCTCATCC 62.036 63.158 0.00 0.00 36.56 3.51
1506 1543 3.617263 GCTTCCAGGTATTGTTACACTCG 59.383 47.826 0.00 0.00 0.00 4.18
1536 1575 4.267690 CGTACGTCGTCCTACAATACTACA 59.732 45.833 7.22 0.00 34.52 2.74
1568 1609 3.374220 ACACGTTTAACATCTGACCGA 57.626 42.857 0.00 0.00 0.00 4.69
1688 1735 2.399448 GAAAGCGCCGGATTTCAAAAA 58.601 42.857 5.05 0.00 45.49 1.94
1694 1741 2.986479 CGCCGGATTTCAAAAAGGAAAG 59.014 45.455 5.05 0.00 39.88 2.62
1804 1857 5.582665 GGATTGATTCTGCGTCTAAAACTCT 59.417 40.000 0.00 0.00 0.00 3.24
1869 1922 0.405198 TCCTTGCCCTTGCTTGATCA 59.595 50.000 0.00 0.00 38.71 2.92
1870 1923 1.203038 TCCTTGCCCTTGCTTGATCAA 60.203 47.619 8.12 8.12 38.71 2.57
3192 3565 7.650504 GTGCCGATGAAACTAGTTATATGTGTA 59.349 37.037 8.92 0.00 0.00 2.90
3296 3674 5.049474 GGGCAAATTTAGCAGGTTTGAAAAG 60.049 40.000 12.54 0.00 35.43 2.27
3308 3686 5.006941 CAGGTTTGAAAAGCAATTCACAAGG 59.993 40.000 7.64 0.00 38.95 3.61
3455 3833 6.262496 GCTTACTAACCCCCTGATTAATGAAC 59.738 42.308 0.00 0.00 0.00 3.18
3519 3897 5.337578 ACACAAAATTACACAGGCAAGTT 57.662 34.783 0.00 0.00 0.00 2.66
3531 3909 7.680442 ACACAGGCAAGTTTGTTTAAATTTT 57.320 28.000 0.00 0.00 0.00 1.82
3540 3918 8.507249 CAAGTTTGTTTAAATTTTGGTTCCACA 58.493 29.630 0.00 0.00 0.00 4.17
3618 4000 4.142293 TGTTCACTTGCACACAAATAAGCA 60.142 37.500 0.00 0.00 34.74 3.91
3621 4003 4.277921 TCACTTGCACACAAATAAGCATGA 59.722 37.500 0.00 0.00 36.80 3.07
3629 4011 6.402766 GCACACAAATAAGCATGAAATTGCAT 60.403 34.615 0.00 0.00 45.23 3.96
3761 4147 6.037098 AGACTAAGCTACATTTACTCGCAAG 58.963 40.000 0.00 0.00 0.00 4.01
3842 4229 1.207089 TCTGGCGGACGATGATTTCTT 59.793 47.619 0.00 0.00 0.00 2.52
3849 4236 4.430007 CGGACGATGATTTCTTGTTCCTA 58.570 43.478 0.00 0.00 0.00 2.94
3913 4301 0.095935 CGGCTCAGAAATTGACTGCG 59.904 55.000 7.71 4.06 35.61 5.18
4030 4423 6.701841 CACTGTTGAGCTCTTTAGTTGAACTA 59.298 38.462 16.19 0.00 32.59 2.24
4038 4431 8.073467 AGCTCTTTAGTTGAACTAGCTTCTAT 57.927 34.615 13.09 0.00 33.51 1.98
4200 4594 5.975693 TTTGTTGGAGAACTTGAACACTT 57.024 34.783 0.00 0.00 32.79 3.16
4352 4752 7.862873 GGAAACACTTGATAGAACTGGAAAAAG 59.137 37.037 0.00 0.00 0.00 2.27
4355 4755 8.697507 ACACTTGATAGAACTGGAAAAAGAAT 57.302 30.769 0.00 0.00 0.00 2.40
4363 4763 7.454260 AGAACTGGAAAAAGAATATTCGCTT 57.546 32.000 9.78 5.10 0.00 4.68
4433 4833 5.581126 CCATATGCATGGTTACTTTGTGT 57.419 39.130 10.16 0.00 45.92 3.72
4457 4857 2.843701 CAGGGAGAATATCTGGTGCAC 58.156 52.381 8.80 8.80 0.00 4.57
4458 4858 2.171237 CAGGGAGAATATCTGGTGCACA 59.829 50.000 20.43 3.92 0.00 4.57
4548 4953 7.927305 TCACACAACATCAATGTATGTTTTG 57.073 32.000 15.94 15.94 45.54 2.44
4649 5065 4.202151 GGCTTTAGATTTGGCCCATTACAG 60.202 45.833 0.00 0.00 38.77 2.74
4650 5066 4.644685 GCTTTAGATTTGGCCCATTACAGA 59.355 41.667 0.00 0.00 0.00 3.41
4654 5070 5.603170 AGATTTGGCCCATTACAGAATTG 57.397 39.130 0.00 0.00 0.00 2.32
4666 5082 7.986320 CCCATTACAGAATTGATGCCAAATTTA 59.014 33.333 0.00 0.00 35.67 1.40
4699 5115 7.264947 TGTATCTCGAGCAATGTCTCAAATTA 58.735 34.615 7.81 0.00 33.41 1.40
4700 5116 6.841443 ATCTCGAGCAATGTCTCAAATTAG 57.159 37.500 7.81 0.00 33.41 1.73
4757 5177 5.769662 TGTGTCAATCTGCTAGATGGTTTTT 59.230 36.000 0.00 0.00 34.65 1.94
4785 5205 7.555639 TTTTACAAACATTTATGTGCTACGC 57.444 32.000 0.00 0.00 41.61 4.42
4791 5211 4.956085 ACATTTATGTGCTACGCTATCCA 58.044 39.130 0.00 0.00 40.03 3.41
4920 5342 9.780413 CAAAGTATCTTTCTTTTTCTATGCTCC 57.220 33.333 0.00 0.00 33.58 4.70
4940 5362 8.370493 TGCTCCTATTAATTTCAGATTCTTCG 57.630 34.615 0.00 0.00 0.00 3.79
5092 5708 6.483974 TGGATTGAGTTTACGAGTTTGCTAAA 59.516 34.615 0.00 0.00 0.00 1.85
5124 5740 9.725019 TCTAGATGAAAATTAACAAAGCTCTCA 57.275 29.630 0.00 0.00 0.00 3.27
5279 5895 4.642429 AGACACCTTCTTGAATTTACGCT 58.358 39.130 0.00 0.00 0.00 5.07
5300 5916 1.524165 TAGCCCGTTTGCAACACGT 60.524 52.632 23.08 13.27 35.81 4.49
5477 6093 2.279252 CGCCCCGTATTCACCGAG 60.279 66.667 0.00 0.00 0.00 4.63
5713 6329 0.884704 ACGGCGGGCAATATCATCAC 60.885 55.000 13.24 0.00 0.00 3.06
5985 6601 6.601741 CAAGAATTGCAAAGCCAACTAAAA 57.398 33.333 1.71 0.00 40.39 1.52
6043 6659 2.942604 ACTAGGTTAGAGGCCAGGAA 57.057 50.000 5.01 0.00 0.00 3.36
6088 6704 2.100252 CAGATAAAATGGCACTGGCAGG 59.900 50.000 20.34 9.00 42.43 4.85
6140 6756 6.665992 ACTGGACAATAAGAGTGTTGAGTA 57.334 37.500 0.00 0.00 30.81 2.59
6167 6783 0.824759 AGGTGATGAAGCGTAGGGAC 59.175 55.000 0.00 0.00 0.00 4.46
6339 6962 9.126151 TGTACCATGTTTTTCTGATAAAAGACA 57.874 29.630 0.00 0.00 37.56 3.41
6385 7008 3.840831 TGAGCATCAGTACAGGCAC 57.159 52.632 0.00 0.00 42.56 5.01
6386 7009 0.975887 TGAGCATCAGTACAGGCACA 59.024 50.000 0.00 0.00 42.56 4.57
6387 7010 1.347378 TGAGCATCAGTACAGGCACAA 59.653 47.619 0.00 0.00 42.56 3.33
6388 7011 2.005451 GAGCATCAGTACAGGCACAAG 58.995 52.381 0.00 0.00 33.17 3.16
6389 7012 0.449388 GCATCAGTACAGGCACAAGC 59.551 55.000 0.00 0.00 41.10 4.01
6390 7013 0.723414 CATCAGTACAGGCACAAGCG 59.277 55.000 0.00 0.00 43.41 4.68
6391 7014 1.021390 ATCAGTACAGGCACAAGCGC 61.021 55.000 0.00 0.00 43.41 5.92
6392 7015 1.669115 CAGTACAGGCACAAGCGCT 60.669 57.895 2.64 2.64 43.41 5.92
6393 7016 1.071471 AGTACAGGCACAAGCGCTT 59.929 52.632 18.98 18.98 43.41 4.68
6394 7017 0.320374 AGTACAGGCACAAGCGCTTA 59.680 50.000 24.55 0.72 43.41 3.09
6395 7018 1.066143 AGTACAGGCACAAGCGCTTAT 60.066 47.619 24.55 9.39 43.41 1.73
6396 7019 2.167693 AGTACAGGCACAAGCGCTTATA 59.832 45.455 24.55 4.12 43.41 0.98
6397 7020 2.332063 ACAGGCACAAGCGCTTATAT 57.668 45.000 24.55 8.73 43.41 0.86
6398 7021 3.469008 ACAGGCACAAGCGCTTATATA 57.531 42.857 24.55 0.00 43.41 0.86
6399 7022 3.131396 ACAGGCACAAGCGCTTATATAC 58.869 45.455 24.55 12.23 43.41 1.47
6400 7023 3.130633 CAGGCACAAGCGCTTATATACA 58.869 45.455 24.55 0.00 43.41 2.29
6401 7024 3.059597 CAGGCACAAGCGCTTATATACAC 60.060 47.826 24.55 9.54 43.41 2.90
6402 7025 2.096909 GGCACAAGCGCTTATATACACG 60.097 50.000 24.55 10.39 43.41 4.49
6409 7032 4.650346 GCGCTTATATACACGCGTATAC 57.350 45.455 13.44 0.00 46.56 1.47
6410 7033 4.090729 GCGCTTATATACACGCGTATACA 58.909 43.478 13.44 0.00 46.56 2.29
6411 7034 4.028990 GCGCTTATATACACGCGTATACAC 60.029 45.833 13.44 0.00 46.56 2.90
6412 7035 5.319139 CGCTTATATACACGCGTATACACT 58.681 41.667 13.44 0.00 42.10 3.55
6413 7036 5.447214 CGCTTATATACACGCGTATACACTC 59.553 44.000 13.44 0.00 42.10 3.51
6414 7037 6.309436 GCTTATATACACGCGTATACACTCA 58.691 40.000 13.44 0.00 42.10 3.41
6415 7038 6.965500 GCTTATATACACGCGTATACACTCAT 59.035 38.462 13.44 0.00 42.10 2.90
6416 7039 7.163845 GCTTATATACACGCGTATACACTCATC 59.836 40.741 13.44 0.00 42.10 2.92
6417 7040 2.486951 ACACGCGTATACACTCATCC 57.513 50.000 13.44 0.00 0.00 3.51
6418 7041 2.022195 ACACGCGTATACACTCATCCT 58.978 47.619 13.44 0.00 0.00 3.24
6419 7042 2.426024 ACACGCGTATACACTCATCCTT 59.574 45.455 13.44 0.00 0.00 3.36
6420 7043 3.628942 ACACGCGTATACACTCATCCTTA 59.371 43.478 13.44 0.00 0.00 2.69
6421 7044 4.277672 ACACGCGTATACACTCATCCTTAT 59.722 41.667 13.44 0.00 0.00 1.73
6422 7045 4.617223 CACGCGTATACACTCATCCTTATG 59.383 45.833 13.44 0.00 0.00 1.90
6423 7046 4.517832 ACGCGTATACACTCATCCTTATGA 59.482 41.667 11.67 0.00 39.87 2.15
6424 7047 5.009310 ACGCGTATACACTCATCCTTATGAA 59.991 40.000 11.67 0.00 41.57 2.57
6425 7048 5.342525 CGCGTATACACTCATCCTTATGAAC 59.657 44.000 0.00 0.00 41.57 3.18
6426 7049 5.342525 GCGTATACACTCATCCTTATGAACG 59.657 44.000 3.32 0.00 41.57 3.95
6427 7050 5.342525 CGTATACACTCATCCTTATGAACGC 59.657 44.000 3.32 0.00 41.57 4.84
6428 7051 3.610040 ACACTCATCCTTATGAACGCA 57.390 42.857 0.00 0.00 41.57 5.24
6429 7052 3.262420 ACACTCATCCTTATGAACGCAC 58.738 45.455 0.00 0.00 41.57 5.34
6430 7053 3.261580 CACTCATCCTTATGAACGCACA 58.738 45.455 0.00 0.00 41.57 4.57
6431 7054 3.062639 CACTCATCCTTATGAACGCACAC 59.937 47.826 0.00 0.00 41.57 3.82
6432 7055 3.261580 CTCATCCTTATGAACGCACACA 58.738 45.455 0.00 0.00 41.57 3.72
6433 7056 3.000041 TCATCCTTATGAACGCACACAC 59.000 45.455 0.00 0.00 39.20 3.82
6434 7057 1.424403 TCCTTATGAACGCACACACG 58.576 50.000 0.00 0.00 39.50 4.49
6435 7058 0.179225 CCTTATGAACGCACACACGC 60.179 55.000 0.00 0.00 36.19 5.34
6436 7059 0.510790 CTTATGAACGCACACACGCA 59.489 50.000 0.00 0.00 36.19 5.24
6437 7060 0.233590 TTATGAACGCACACACGCAC 59.766 50.000 0.00 0.00 36.19 5.34
6438 7061 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
6439 7062 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
6440 7063 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
6443 7066 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
6444 7067 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
6445 7068 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
6446 7069 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
6447 7070 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
6448 7071 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
6449 7072 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
6450 7073 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
6451 7074 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
6452 7075 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
6453 7076 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
6454 7077 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
6455 7078 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
6456 7079 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
6457 7080 0.341961 ACCCTACCCCTATGAGCACA 59.658 55.000 0.00 0.00 0.00 4.57
6458 7081 1.061346 ACCCTACCCCTATGAGCACAT 60.061 52.381 1.31 1.31 40.16 3.21
6459 7082 1.625818 CCCTACCCCTATGAGCACATC 59.374 57.143 0.00 0.00 37.87 3.06
6460 7083 1.625818 CCTACCCCTATGAGCACATCC 59.374 57.143 0.00 0.00 37.87 3.51
6461 7084 1.273606 CTACCCCTATGAGCACATCCG 59.726 57.143 0.00 0.00 37.87 4.18
6462 7085 0.398522 ACCCCTATGAGCACATCCGA 60.399 55.000 0.00 0.00 37.87 4.55
6463 7086 0.319728 CCCCTATGAGCACATCCGAG 59.680 60.000 0.00 0.00 37.87 4.63
6464 7087 1.332195 CCCTATGAGCACATCCGAGA 58.668 55.000 0.00 0.00 37.87 4.04
6465 7088 1.271934 CCCTATGAGCACATCCGAGAG 59.728 57.143 0.00 0.00 37.87 3.20
6466 7089 2.234143 CCTATGAGCACATCCGAGAGA 58.766 52.381 0.00 0.00 37.87 3.10
6467 7090 2.030363 CCTATGAGCACATCCGAGAGAC 60.030 54.545 0.00 0.00 37.87 3.36
6468 7091 1.774110 ATGAGCACATCCGAGAGACT 58.226 50.000 0.00 0.00 29.98 3.24
6469 7092 2.420058 TGAGCACATCCGAGAGACTA 57.580 50.000 0.00 0.00 0.00 2.59
6470 7093 2.723273 TGAGCACATCCGAGAGACTAA 58.277 47.619 0.00 0.00 0.00 2.24
6471 7094 2.685388 TGAGCACATCCGAGAGACTAAG 59.315 50.000 0.00 0.00 0.00 2.18
6472 7095 1.407258 AGCACATCCGAGAGACTAAGC 59.593 52.381 0.00 0.00 0.00 3.09
6473 7096 1.537135 GCACATCCGAGAGACTAAGCC 60.537 57.143 0.00 0.00 0.00 4.35
6474 7097 1.025812 ACATCCGAGAGACTAAGCCG 58.974 55.000 0.00 0.00 0.00 5.52
6475 7098 0.312416 CATCCGAGAGACTAAGCCGG 59.688 60.000 0.00 0.00 41.36 6.13
6476 7099 1.457009 ATCCGAGAGACTAAGCCGGC 61.457 60.000 21.89 21.89 39.96 6.13
6477 7100 2.415608 CCGAGAGACTAAGCCGGCA 61.416 63.158 31.54 7.98 33.47 5.69
6478 7101 1.736586 CGAGAGACTAAGCCGGCAT 59.263 57.895 31.54 21.32 0.00 4.40
6479 7102 0.952280 CGAGAGACTAAGCCGGCATA 59.048 55.000 31.54 21.29 0.00 3.14
6480 7103 1.542030 CGAGAGACTAAGCCGGCATAT 59.458 52.381 31.54 17.05 0.00 1.78
6481 7104 2.414824 CGAGAGACTAAGCCGGCATATC 60.415 54.545 31.54 19.70 0.00 1.63
6482 7105 2.558795 GAGAGACTAAGCCGGCATATCA 59.441 50.000 31.54 7.27 0.00 2.15
6483 7106 3.169099 AGAGACTAAGCCGGCATATCAT 58.831 45.455 31.54 10.36 0.00 2.45
6484 7107 3.194542 AGAGACTAAGCCGGCATATCATC 59.805 47.826 31.54 18.93 0.00 2.92
6485 7108 3.169099 AGACTAAGCCGGCATATCATCT 58.831 45.455 31.54 19.69 0.00 2.90
6486 7109 3.580458 AGACTAAGCCGGCATATCATCTT 59.420 43.478 31.54 14.07 0.00 2.40
6487 7110 3.668447 ACTAAGCCGGCATATCATCTTG 58.332 45.455 31.54 9.76 0.00 3.02
6488 7111 2.936919 AAGCCGGCATATCATCTTGA 57.063 45.000 31.54 0.00 0.00 3.02
6489 7112 2.469274 AGCCGGCATATCATCTTGAG 57.531 50.000 31.54 0.00 0.00 3.02
6490 7113 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
6491 7114 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
6492 7115 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
6493 7116 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
6494 7117 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
6495 7118 5.587844 GCCGGCATATCATCTTGAGATTTAT 59.412 40.000 24.80 0.00 31.21 1.40
6496 7119 6.457934 GCCGGCATATCATCTTGAGATTTATG 60.458 42.308 24.80 12.28 34.43 1.90
6497 7120 6.820152 CCGGCATATCATCTTGAGATTTATGA 59.180 38.462 17.06 5.24 33.82 2.15
6498 7121 7.335171 CCGGCATATCATCTTGAGATTTATGAA 59.665 37.037 17.06 0.00 33.82 2.57
6499 7122 8.388853 CGGCATATCATCTTGAGATTTATGAAG 58.611 37.037 17.06 10.18 33.82 3.02
6500 7123 9.228949 GGCATATCATCTTGAGATTTATGAAGT 57.771 33.333 17.06 0.00 33.82 3.01
6504 7127 8.674263 ATCATCTTGAGATTTATGAAGTCACC 57.326 34.615 0.00 0.00 32.47 4.02
6505 7128 7.623630 TCATCTTGAGATTTATGAAGTCACCA 58.376 34.615 0.00 0.00 31.21 4.17
6506 7129 8.270030 TCATCTTGAGATTTATGAAGTCACCAT 58.730 33.333 0.00 0.00 31.21 3.55
6507 7130 9.551734 CATCTTGAGATTTATGAAGTCACCATA 57.448 33.333 0.00 0.00 31.21 2.74
6508 7131 9.775854 ATCTTGAGATTTATGAAGTCACCATAG 57.224 33.333 0.00 0.00 0.00 2.23
6509 7132 8.206867 TCTTGAGATTTATGAAGTCACCATAGG 58.793 37.037 0.00 0.00 0.00 2.57
6510 7133 6.291377 TGAGATTTATGAAGTCACCATAGGC 58.709 40.000 0.00 0.00 0.00 3.93
6511 7134 5.300752 AGATTTATGAAGTCACCATAGGCG 58.699 41.667 0.00 0.00 0.00 5.52
6512 7135 2.526304 TATGAAGTCACCATAGGCGC 57.474 50.000 0.00 0.00 0.00 6.53
6513 7136 0.179045 ATGAAGTCACCATAGGCGCC 60.179 55.000 21.89 21.89 0.00 6.53
6514 7137 1.264749 TGAAGTCACCATAGGCGCCT 61.265 55.000 34.85 34.85 0.00 5.52
6515 7138 0.530870 GAAGTCACCATAGGCGCCTC 60.531 60.000 36.73 17.40 0.00 4.70
6516 7139 2.279517 GTCACCATAGGCGCCTCG 60.280 66.667 36.73 25.26 0.00 4.63
6517 7140 2.758327 TCACCATAGGCGCCTCGT 60.758 61.111 36.73 24.45 0.00 4.18
6518 7141 2.279517 CACCATAGGCGCCTCGTC 60.280 66.667 36.73 1.08 0.00 4.20
6519 7142 3.900892 ACCATAGGCGCCTCGTCG 61.901 66.667 36.73 21.01 36.23 5.12
6520 7143 3.900892 CCATAGGCGCCTCGTCGT 61.901 66.667 36.73 11.27 36.23 4.34
6521 7144 2.353607 CATAGGCGCCTCGTCGTC 60.354 66.667 36.73 0.00 36.23 4.20
6522 7145 3.950254 ATAGGCGCCTCGTCGTCG 61.950 66.667 36.73 0.00 39.34 5.12
6544 7167 3.516578 GGAACGTCTTCTCCCACTG 57.483 57.895 0.00 0.00 0.00 3.66
6545 7168 0.966920 GGAACGTCTTCTCCCACTGA 59.033 55.000 0.00 0.00 0.00 3.41
6546 7169 1.343465 GGAACGTCTTCTCCCACTGAA 59.657 52.381 0.00 0.00 0.00 3.02
6547 7170 2.224209 GGAACGTCTTCTCCCACTGAAA 60.224 50.000 0.00 0.00 0.00 2.69
6548 7171 2.821991 ACGTCTTCTCCCACTGAAAG 57.178 50.000 0.00 0.00 42.29 2.62
6549 7172 1.270358 ACGTCTTCTCCCACTGAAAGC 60.270 52.381 0.00 0.00 37.60 3.51
6550 7173 1.433534 GTCTTCTCCCACTGAAAGCG 58.566 55.000 0.00 0.00 37.60 4.68
6551 7174 0.320771 TCTTCTCCCACTGAAAGCGC 60.321 55.000 0.00 0.00 37.60 5.92
6552 7175 0.603707 CTTCTCCCACTGAAAGCGCA 60.604 55.000 11.47 0.00 37.60 6.09
6553 7176 0.036732 TTCTCCCACTGAAAGCGCAT 59.963 50.000 11.47 0.00 37.60 4.73
6554 7177 0.391661 TCTCCCACTGAAAGCGCATC 60.392 55.000 11.47 8.39 37.60 3.91
6555 7178 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
6566 7189 3.409856 CGCATCGCCGAAAATCCT 58.590 55.556 0.00 0.00 0.00 3.24
6567 7190 1.010797 CGCATCGCCGAAAATCCTG 60.011 57.895 0.00 0.00 0.00 3.86
6568 7191 1.428370 CGCATCGCCGAAAATCCTGA 61.428 55.000 0.00 0.00 0.00 3.86
6569 7192 0.732571 GCATCGCCGAAAATCCTGAA 59.267 50.000 0.00 0.00 0.00 3.02
6570 7193 1.132262 GCATCGCCGAAAATCCTGAAA 59.868 47.619 0.00 0.00 0.00 2.69
6571 7194 2.223572 GCATCGCCGAAAATCCTGAAAT 60.224 45.455 0.00 0.00 0.00 2.17
6572 7195 3.003275 GCATCGCCGAAAATCCTGAAATA 59.997 43.478 0.00 0.00 0.00 1.40
6573 7196 4.497340 GCATCGCCGAAAATCCTGAAATAA 60.497 41.667 0.00 0.00 0.00 1.40
6574 7197 5.577835 CATCGCCGAAAATCCTGAAATAAA 58.422 37.500 0.00 0.00 0.00 1.40
6575 7198 5.828299 TCGCCGAAAATCCTGAAATAAAT 57.172 34.783 0.00 0.00 0.00 1.40
6576 7199 5.816919 TCGCCGAAAATCCTGAAATAAATC 58.183 37.500 0.00 0.00 0.00 2.17
6577 7200 4.976116 CGCCGAAAATCCTGAAATAAATCC 59.024 41.667 0.00 0.00 0.00 3.01
6578 7201 5.449862 CGCCGAAAATCCTGAAATAAATCCA 60.450 40.000 0.00 0.00 0.00 3.41
6579 7202 5.979517 GCCGAAAATCCTGAAATAAATCCAG 59.020 40.000 0.00 0.00 0.00 3.86
6580 7203 6.507023 CCGAAAATCCTGAAATAAATCCAGG 58.493 40.000 0.00 0.00 46.64 4.45
6590 7213 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
6591 7214 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
6592 7215 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
6593 7216 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
6594 7217 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
6595 7218 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
6596 7219 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
6597 7220 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
6598 7221 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
6599 7222 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
6600 7223 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
6601 7224 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
6602 7225 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
6603 7226 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
6604 7227 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
6605 7228 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
6606 7229 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
6607 7230 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
6608 7231 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
6609 7232 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
6626 7249 1.522900 CCTGATGGGTTGGGGATACT 58.477 55.000 0.00 0.00 0.00 2.12
6627 7250 2.701551 CCTGATGGGTTGGGGATACTA 58.298 52.381 0.00 0.00 0.00 1.82
6628 7251 2.372172 CCTGATGGGTTGGGGATACTAC 59.628 54.545 0.00 0.00 0.00 2.73
6629 7252 3.318313 CTGATGGGTTGGGGATACTACT 58.682 50.000 0.00 0.00 0.00 2.57
6630 7253 3.045634 TGATGGGTTGGGGATACTACTG 58.954 50.000 0.00 0.00 0.00 2.74
6631 7254 2.653543 TGGGTTGGGGATACTACTGT 57.346 50.000 0.00 0.00 0.00 3.55
6632 7255 2.474112 TGGGTTGGGGATACTACTGTC 58.526 52.381 0.00 0.00 0.00 3.51
6633 7256 1.767088 GGGTTGGGGATACTACTGTCC 59.233 57.143 0.00 0.00 0.00 4.02
6634 7257 2.474112 GGTTGGGGATACTACTGTCCA 58.526 52.381 0.00 0.00 36.19 4.02
6635 7258 2.169978 GGTTGGGGATACTACTGTCCAC 59.830 54.545 0.00 0.00 38.44 4.02
6636 7259 2.169978 GTTGGGGATACTACTGTCCACC 59.830 54.545 0.00 0.00 37.10 4.61
6637 7260 1.649633 TGGGGATACTACTGTCCACCT 59.350 52.381 0.00 0.00 37.10 4.00
6638 7261 2.860679 TGGGGATACTACTGTCCACCTA 59.139 50.000 0.00 0.00 37.10 3.08
6639 7262 3.272818 TGGGGATACTACTGTCCACCTAA 59.727 47.826 0.00 0.00 37.10 2.69
6640 7263 3.640498 GGGGATACTACTGTCCACCTAAC 59.360 52.174 0.00 0.00 36.19 2.34
6641 7264 3.640498 GGGATACTACTGTCCACCTAACC 59.360 52.174 0.00 0.00 36.19 2.85
6642 7265 4.284178 GGATACTACTGTCCACCTAACCA 58.716 47.826 0.00 0.00 34.57 3.67
6643 7266 4.900054 GGATACTACTGTCCACCTAACCAT 59.100 45.833 0.00 0.00 34.57 3.55
6644 7267 5.010820 GGATACTACTGTCCACCTAACCATC 59.989 48.000 0.00 0.00 34.57 3.51
6645 7268 4.062490 ACTACTGTCCACCTAACCATCT 57.938 45.455 0.00 0.00 0.00 2.90
6646 7269 4.024670 ACTACTGTCCACCTAACCATCTC 58.975 47.826 0.00 0.00 0.00 2.75
6647 7270 2.902608 ACTGTCCACCTAACCATCTCA 58.097 47.619 0.00 0.00 0.00 3.27
6648 7271 3.248024 ACTGTCCACCTAACCATCTCAA 58.752 45.455 0.00 0.00 0.00 3.02
6649 7272 3.008049 ACTGTCCACCTAACCATCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
6650 7273 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
6651 7274 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
6652 7275 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
6653 7276 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
6654 7277 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
6655 7278 2.305927 ACCTAACCATCTCAACCACAGG 59.694 50.000 0.00 0.00 0.00 4.00
6656 7279 2.305927 CCTAACCATCTCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
6666 7289 3.834726 CCACAGGTTGGTTCGCAA 58.165 55.556 0.00 0.00 41.10 4.85
6667 7290 1.358759 CCACAGGTTGGTTCGCAAC 59.641 57.895 0.00 0.00 41.10 4.17
6668 7291 1.101049 CCACAGGTTGGTTCGCAACT 61.101 55.000 0.00 0.00 41.10 3.16
6669 7292 0.307760 CACAGGTTGGTTCGCAACTC 59.692 55.000 0.00 0.00 33.41 3.01
6670 7293 0.107410 ACAGGTTGGTTCGCAACTCA 60.107 50.000 0.00 0.00 33.41 3.41
6671 7294 1.238439 CAGGTTGGTTCGCAACTCAT 58.762 50.000 0.00 0.00 33.41 2.90
6672 7295 2.224426 ACAGGTTGGTTCGCAACTCATA 60.224 45.455 0.00 0.00 33.41 2.15
6673 7296 2.811431 CAGGTTGGTTCGCAACTCATAA 59.189 45.455 0.00 0.00 33.41 1.90
6674 7297 3.440173 CAGGTTGGTTCGCAACTCATAAT 59.560 43.478 0.00 0.00 33.41 1.28
6675 7298 3.440173 AGGTTGGTTCGCAACTCATAATG 59.560 43.478 0.00 0.00 33.41 1.90
6676 7299 3.171277 GTTGGTTCGCAACTCATAATGC 58.829 45.455 0.00 0.00 39.17 3.56
6721 7344 2.974148 TGCACACGCAGCCTCAAG 60.974 61.111 0.00 0.00 45.36 3.02
6722 7345 4.395583 GCACACGCAGCCTCAAGC 62.396 66.667 0.00 0.00 44.25 4.01
6750 7373 0.662619 AATGCACACGGTCAACACTG 59.337 50.000 0.00 0.00 34.67 3.66
6755 7378 1.003851 ACACGGTCAACACTGAAACG 58.996 50.000 0.00 0.00 39.08 3.60
6756 7379 0.315869 CACGGTCAACACTGAAACGC 60.316 55.000 0.00 0.00 37.59 4.84
6763 7386 1.396648 CAACACTGAAACGCACACAGA 59.603 47.619 0.00 0.00 35.85 3.41
6765 7388 1.665679 ACACTGAAACGCACACAGAAG 59.334 47.619 0.00 0.00 35.85 2.85
6796 7419 6.997239 AAAACACGACCTCTAAAACTCTTT 57.003 33.333 0.00 0.00 0.00 2.52
6823 7446 6.141560 TGAACTACAACATGCAACATCAAA 57.858 33.333 0.00 0.00 0.00 2.69
6832 7455 4.746115 ACATGCAACATCAAACATCAACAC 59.254 37.500 0.00 0.00 0.00 3.32
6836 7459 4.442073 GCAACATCAAACATCAACACACTC 59.558 41.667 0.00 0.00 0.00 3.51
6859 7482 6.571605 TCTGAGAAATGCATTTCAAACAACA 58.428 32.000 39.58 28.23 46.50 3.33
6879 7502 2.472695 ACGCCTGCAAGAAGTGAATA 57.527 45.000 0.00 0.00 34.07 1.75
6908 7531 5.066893 GCATGTGTCATTGTCACCAGATTAT 59.933 40.000 10.78 0.00 35.25 1.28
6909 7532 6.492254 CATGTGTCATTGTCACCAGATTATG 58.508 40.000 10.78 4.22 35.25 1.90
6918 7541 2.145865 CCAGATTATGGCGGGTCCT 58.854 57.895 0.00 0.00 43.83 3.85
6919 7542 0.035458 CCAGATTATGGCGGGTCCTC 59.965 60.000 0.00 0.00 43.83 3.71
6920 7543 0.319900 CAGATTATGGCGGGTCCTCG 60.320 60.000 0.00 0.00 35.26 4.63
6934 7557 0.035439 TCCTCGCATTTCAAGGGACC 60.035 55.000 0.00 0.00 0.00 4.46
6951 7574 0.323957 ACCGGGGTGAAACTAGAAGC 59.676 55.000 6.32 0.00 36.74 3.86
6952 7575 0.739813 CCGGGGTGAAACTAGAAGCG 60.740 60.000 0.00 0.00 36.74 4.68
6953 7576 0.245539 CGGGGTGAAACTAGAAGCGA 59.754 55.000 0.00 0.00 36.74 4.93
6954 7577 1.337447 CGGGGTGAAACTAGAAGCGAA 60.337 52.381 0.00 0.00 36.74 4.70
6955 7578 2.774687 GGGGTGAAACTAGAAGCGAAA 58.225 47.619 0.00 0.00 36.74 3.46
6956 7579 2.483106 GGGGTGAAACTAGAAGCGAAAC 59.517 50.000 0.00 0.00 36.74 2.78
6957 7580 3.400255 GGGTGAAACTAGAAGCGAAACT 58.600 45.455 0.00 0.00 36.74 2.66
6958 7581 3.186613 GGGTGAAACTAGAAGCGAAACTG 59.813 47.826 0.00 0.00 36.74 3.16
6959 7582 3.364068 GGTGAAACTAGAAGCGAAACTGC 60.364 47.826 0.00 0.00 36.74 4.40
6960 7583 2.806244 TGAAACTAGAAGCGAAACTGCC 59.194 45.455 0.00 0.00 34.65 4.85
6961 7584 2.841442 AACTAGAAGCGAAACTGCCT 57.159 45.000 0.00 0.00 34.65 4.75
6962 7585 2.841442 ACTAGAAGCGAAACTGCCTT 57.159 45.000 0.00 0.00 34.65 4.35
6963 7586 2.417719 ACTAGAAGCGAAACTGCCTTG 58.582 47.619 0.00 0.00 34.65 3.61
6964 7587 1.129437 CTAGAAGCGAAACTGCCTTGC 59.871 52.381 0.00 0.00 34.65 4.01
6965 7588 1.441016 GAAGCGAAACTGCCTTGCG 60.441 57.895 0.00 0.00 34.65 4.85
6966 7589 2.117941 GAAGCGAAACTGCCTTGCGT 62.118 55.000 0.00 0.00 34.65 5.24
6967 7590 0.882927 AAGCGAAACTGCCTTGCGTA 60.883 50.000 0.00 0.00 34.65 4.42
6968 7591 0.673644 AGCGAAACTGCCTTGCGTAT 60.674 50.000 0.00 0.00 34.65 3.06
6969 7592 0.521242 GCGAAACTGCCTTGCGTATG 60.521 55.000 0.00 0.00 0.00 2.39
6970 7593 1.075542 CGAAACTGCCTTGCGTATGA 58.924 50.000 0.00 0.00 0.00 2.15
6971 7594 1.665679 CGAAACTGCCTTGCGTATGAT 59.334 47.619 0.00 0.00 0.00 2.45
6972 7595 2.095853 CGAAACTGCCTTGCGTATGATT 59.904 45.455 0.00 0.00 0.00 2.57
6973 7596 3.426159 CGAAACTGCCTTGCGTATGATTT 60.426 43.478 0.00 0.00 0.00 2.17
6974 7597 4.485163 GAAACTGCCTTGCGTATGATTTT 58.515 39.130 0.00 0.00 0.00 1.82
6975 7598 4.519540 AACTGCCTTGCGTATGATTTTT 57.480 36.364 0.00 0.00 0.00 1.94
7000 7623 9.839817 TTTCCCATACGATTTTATATGACAAGA 57.160 29.630 0.00 0.00 31.54 3.02
7001 7624 8.827177 TCCCATACGATTTTATATGACAAGAC 57.173 34.615 0.00 0.00 31.54 3.01
7002 7625 8.425703 TCCCATACGATTTTATATGACAAGACA 58.574 33.333 0.00 0.00 31.54 3.41
7003 7626 8.495949 CCCATACGATTTTATATGACAAGACAC 58.504 37.037 0.00 0.00 31.54 3.67
7004 7627 9.040939 CCATACGATTTTATATGACAAGACACA 57.959 33.333 0.00 0.00 31.54 3.72
7006 7629 7.539712 ACGATTTTATATGACAAGACACAGG 57.460 36.000 0.00 0.00 0.00 4.00
7007 7630 6.037172 ACGATTTTATATGACAAGACACAGGC 59.963 38.462 0.00 0.00 0.00 4.85
7008 7631 6.511767 CGATTTTATATGACAAGACACAGGCC 60.512 42.308 0.00 0.00 0.00 5.19
7009 7632 2.717639 ATATGACAAGACACAGGCCC 57.282 50.000 0.00 0.00 0.00 5.80
7010 7633 0.249120 TATGACAAGACACAGGCCCG 59.751 55.000 0.00 0.00 0.00 6.13
7011 7634 1.768684 ATGACAAGACACAGGCCCGT 61.769 55.000 0.00 0.00 0.00 5.28
7012 7635 1.227853 GACAAGACACAGGCCCGTT 60.228 57.895 0.00 0.00 0.00 4.44
7013 7636 1.227853 ACAAGACACAGGCCCGTTC 60.228 57.895 0.00 0.00 0.00 3.95
7014 7637 1.966451 CAAGACACAGGCCCGTTCC 60.966 63.158 0.00 0.00 0.00 3.62
7015 7638 3.192103 AAGACACAGGCCCGTTCCC 62.192 63.158 0.00 0.00 0.00 3.97
7016 7639 3.948719 GACACAGGCCCGTTCCCA 61.949 66.667 0.00 0.00 0.00 4.37
7017 7640 3.485346 GACACAGGCCCGTTCCCAA 62.485 63.158 0.00 0.00 0.00 4.12
7018 7641 2.983592 CACAGGCCCGTTCCCAAC 60.984 66.667 0.00 0.00 0.00 3.77
7032 7655 4.484987 CAACGTTTGGGCCCACTA 57.515 55.556 28.70 13.72 0.00 2.74
7033 7656 1.953772 CAACGTTTGGGCCCACTAC 59.046 57.895 28.70 24.15 0.00 2.73
7034 7657 0.820074 CAACGTTTGGGCCCACTACA 60.820 55.000 28.70 6.96 0.00 2.74
7035 7658 0.820482 AACGTTTGGGCCCACTACAC 60.820 55.000 28.70 17.82 0.00 2.90
7036 7659 1.969589 CGTTTGGGCCCACTACACC 60.970 63.158 28.70 0.00 0.00 4.16
7037 7660 1.151908 GTTTGGGCCCACTACACCA 59.848 57.895 28.70 4.49 0.00 4.17
7038 7661 0.893727 GTTTGGGCCCACTACACCAG 60.894 60.000 28.70 0.00 33.96 4.00
7039 7662 1.063070 TTTGGGCCCACTACACCAGA 61.063 55.000 28.70 2.55 33.96 3.86
7040 7663 1.063070 TTGGGCCCACTACACCAGAA 61.063 55.000 28.70 1.58 33.96 3.02
7041 7664 1.002502 GGGCCCACTACACCAGAAC 60.003 63.158 19.95 0.00 0.00 3.01
7042 7665 1.758592 GGCCCACTACACCAGAACA 59.241 57.895 0.00 0.00 0.00 3.18
7043 7666 0.321653 GGCCCACTACACCAGAACAG 60.322 60.000 0.00 0.00 0.00 3.16
7044 7667 0.396811 GCCCACTACACCAGAACAGT 59.603 55.000 0.00 0.00 0.00 3.55
7045 7668 1.608283 GCCCACTACACCAGAACAGTC 60.608 57.143 0.00 0.00 0.00 3.51
7046 7669 1.971357 CCCACTACACCAGAACAGTCT 59.029 52.381 0.00 0.00 32.85 3.24
7055 7678 1.607713 CAGAACAGTCTGCTCGTACG 58.392 55.000 9.53 9.53 44.74 3.67
7056 7679 0.109689 AGAACAGTCTGCTCGTACGC 60.110 55.000 11.24 0.00 30.83 4.42
7057 7680 0.386858 GAACAGTCTGCTCGTACGCA 60.387 55.000 11.24 2.48 38.40 5.24
7058 7681 0.031585 AACAGTCTGCTCGTACGCAA 59.968 50.000 11.24 0.00 39.80 4.85
7059 7682 0.031585 ACAGTCTGCTCGTACGCAAA 59.968 50.000 11.24 0.00 39.80 3.68
7060 7683 1.136690 CAGTCTGCTCGTACGCAAAA 58.863 50.000 11.24 0.00 39.80 2.44
7061 7684 1.726791 CAGTCTGCTCGTACGCAAAAT 59.273 47.619 11.24 0.00 39.80 1.82
7062 7685 1.993370 AGTCTGCTCGTACGCAAAATC 59.007 47.619 11.24 0.00 39.80 2.17
7063 7686 0.989164 TCTGCTCGTACGCAAAATCG 59.011 50.000 11.24 0.00 39.80 3.34
7064 7687 0.713883 CTGCTCGTACGCAAAATCGT 59.286 50.000 11.24 0.00 45.49 3.73
7065 7688 1.915350 CTGCTCGTACGCAAAATCGTA 59.085 47.619 11.24 0.00 43.15 3.43
7066 7689 2.532235 TGCTCGTACGCAAAATCGTAT 58.468 42.857 11.24 0.00 45.16 3.06
7067 7690 3.693654 TGCTCGTACGCAAAATCGTATA 58.306 40.909 11.24 0.00 45.16 1.47
7068 7691 4.104066 TGCTCGTACGCAAAATCGTATAA 58.896 39.130 11.24 0.00 45.16 0.98
7069 7692 4.562000 TGCTCGTACGCAAAATCGTATAAA 59.438 37.500 11.24 0.00 45.16 1.40
7070 7693 5.061933 TGCTCGTACGCAAAATCGTATAAAA 59.938 36.000 11.24 0.00 45.16 1.52
7071 7694 6.124759 GCTCGTACGCAAAATCGTATAAAAT 58.875 36.000 11.24 0.00 45.16 1.82
7072 7695 6.626095 GCTCGTACGCAAAATCGTATAAAATT 59.374 34.615 11.24 0.00 45.16 1.82
7073 7696 7.163032 GCTCGTACGCAAAATCGTATAAAATTT 59.837 33.333 11.24 0.00 45.16 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
98 100 3.509967 TCTGATGTGTACGTCAAGTCCAT 59.490 43.478 8.16 0.00 40.93 3.41
323 326 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
484 495 8.739972 GGCACAAAGGAGAAATTAATAAAGAGA 58.260 33.333 0.00 0.00 0.00 3.10
511 522 1.489481 TGATTGATGACGAGAGGCCT 58.511 50.000 3.86 3.86 39.67 5.19
513 524 2.474359 CGATTGATTGATGACGAGAGGC 59.526 50.000 0.00 0.00 42.12 4.70
596 619 0.685785 TGGGTTGTTGCTTGCCAAGA 60.686 50.000 9.04 0.00 33.21 3.02
667 697 3.891586 CTGCGCTTGTTGCTGCTGG 62.892 63.158 9.73 0.00 40.17 4.85
1080 1117 2.114625 TGCTGCTGCTTCTTGGCT 59.885 55.556 17.00 0.00 40.48 4.75
1201 1238 2.290641 TCGGAGAAACAGCAAAGAAAGC 59.709 45.455 0.00 0.00 0.00 3.51
1205 1242 1.512926 GCTCGGAGAAACAGCAAAGA 58.487 50.000 9.69 0.00 34.09 2.52
1208 1245 0.603707 CAGGCTCGGAGAAACAGCAA 60.604 55.000 9.69 0.00 34.09 3.91
1210 1247 0.739112 CTCAGGCTCGGAGAAACAGC 60.739 60.000 9.69 0.00 34.09 4.40
1212 1249 0.318441 CACTCAGGCTCGGAGAAACA 59.682 55.000 9.69 0.00 36.26 2.83
1213 1250 0.603569 TCACTCAGGCTCGGAGAAAC 59.396 55.000 9.69 0.00 36.26 2.78
1214 1251 0.891373 CTCACTCAGGCTCGGAGAAA 59.109 55.000 9.69 0.00 36.26 2.52
1224 1261 0.528033 CTGCTGCGATCTCACTCAGG 60.528 60.000 0.00 0.00 0.00 3.86
1425 1462 2.629050 ATCGCCGGGATGAACTCGTG 62.629 60.000 2.18 0.00 41.44 4.35
1536 1575 4.213694 TGTTAAACGTGTATGTTGGCGATT 59.786 37.500 0.00 0.00 31.10 3.34
1568 1609 1.593787 CAGAGACTCACATGGCGGT 59.406 57.895 5.02 0.00 0.00 5.68
1642 1687 2.594529 CGTTTGATGTAACGCAAGCT 57.405 45.000 0.00 0.00 43.51 3.74
1688 1735 4.473559 TGTCCTAATCCGAAATCCTTTCCT 59.526 41.667 0.00 0.00 36.30 3.36
1694 1741 3.802685 CGACTTGTCCTAATCCGAAATCC 59.197 47.826 0.00 0.00 0.00 3.01
1819 1872 6.500910 ACTGAAAACGACTTAAACCCAAATC 58.499 36.000 0.00 0.00 0.00 2.17
1906 1963 6.920758 ACACAAAACAAATACGCAACACATAT 59.079 30.769 0.00 0.00 0.00 1.78
2148 2325 5.456921 ACATCCATATCACAGGTCCTTTT 57.543 39.130 0.00 0.00 0.00 2.27
2324 2501 4.023193 GGGTAAAGATAATGCATTCCCGTG 60.023 45.833 16.86 0.00 0.00 4.94
2448 2628 7.567458 TGATATGTCATTCATCACTCTTTCCA 58.433 34.615 0.00 0.00 37.91 3.53
3107 3479 6.969473 GCAATTTGGACTAGCTAGATTCAAAC 59.031 38.462 27.45 15.55 0.00 2.93
3192 3565 7.865820 TCCAAGTTTCTTGAGATAGATTCCAT 58.134 34.615 10.54 0.00 0.00 3.41
3296 3674 4.233005 GAGCTTCTTTCCTTGTGAATTGC 58.767 43.478 0.00 0.00 31.67 3.56
3308 3686 2.474816 AGACACACACGAGCTTCTTTC 58.525 47.619 0.00 0.00 0.00 2.62
3476 3854 8.334263 TGTGTTCAGAAGTGCAAATAATATCA 57.666 30.769 0.00 0.00 0.00 2.15
3495 3873 5.348164 ACTTGCCTGTGTAATTTTGTGTTC 58.652 37.500 0.00 0.00 0.00 3.18
3519 3897 7.979444 TTGTGTGGAACCAAAATTTAAACAA 57.021 28.000 0.00 0.00 34.36 2.83
3569 3947 5.715429 TTTGCATGCAGTTACACTTTTTG 57.285 34.783 21.50 0.00 0.00 2.44
3743 4129 5.238583 AGTTTCTTGCGAGTAAATGTAGCT 58.761 37.500 0.00 0.00 0.00 3.32
3754 4140 2.953020 AGCAGACTAGTTTCTTGCGAG 58.047 47.619 0.00 0.00 0.00 5.03
3761 4147 4.177783 GGCACTCTTAGCAGACTAGTTTC 58.822 47.826 0.00 0.00 0.00 2.78
3773 4159 1.065854 CCTTGTCCAGGGCACTCTTAG 60.066 57.143 0.00 0.00 39.39 2.18
3842 4229 6.707440 TGCTTGTTTTGAGAATTAGGAACA 57.293 33.333 0.00 0.00 0.00 3.18
3849 4236 6.535274 GCAGAATTGCTTGTTTTGAGAATT 57.465 33.333 0.00 0.00 46.95 2.17
4006 4399 5.675538 AGTTCAACTAAAGAGCTCAACAGT 58.324 37.500 17.77 12.03 0.00 3.55
4030 4423 9.692325 ATTCTAATGTTTGGAAAGATAGAAGCT 57.308 29.630 0.00 0.00 33.74 3.74
4095 4489 9.996554 TTGTCAGAGAGATAAAAATACACTTGA 57.003 29.630 0.00 0.00 0.00 3.02
4164 4558 6.778821 TCTCCAACAAATAAGAATCCACTCA 58.221 36.000 0.00 0.00 0.00 3.41
4200 4594 9.251440 AGCTACCTAACCGATCAATATATAACA 57.749 33.333 0.00 0.00 0.00 2.41
4224 4622 5.107104 GCAAACAAGCTTTAAAATGGGTAGC 60.107 40.000 0.00 0.00 0.00 3.58
4239 4637 9.500864 TTTCTAAATTTGAATTTGCAAACAAGC 57.499 25.926 15.41 4.83 40.23 4.01
4269 4667 2.276732 AATGTGCAGCTTACAGGTGT 57.723 45.000 6.70 0.00 44.96 4.16
4322 4722 5.238650 CCAGTTCTATCAAGTGTTTCCGTTT 59.761 40.000 0.00 0.00 0.00 3.60
4323 4723 4.755123 CCAGTTCTATCAAGTGTTTCCGTT 59.245 41.667 0.00 0.00 0.00 4.44
4363 4763 1.138069 TGTGTTTCTTCCGCAGACTCA 59.862 47.619 0.00 0.00 0.00 3.41
4376 4776 3.684305 GCAAATAGGCCCAAATGTGTTTC 59.316 43.478 0.00 0.00 0.00 2.78
4414 4814 5.649831 TGCATACACAAAGTAACCATGCATA 59.350 36.000 0.00 0.00 39.05 3.14
4433 4833 3.008375 GCACCAGATATTCTCCCTGCATA 59.992 47.826 0.00 0.00 0.00 3.14
4457 4857 4.036734 AGTTTAGTGCATCACAAACACCTG 59.963 41.667 17.97 0.00 37.58 4.00
4458 4858 4.207165 AGTTTAGTGCATCACAAACACCT 58.793 39.130 17.97 0.00 37.58 4.00
4463 4863 2.811431 CGGGAGTTTAGTGCATCACAAA 59.189 45.455 0.00 0.00 36.74 2.83
4469 4869 6.912951 ATATACTACGGGAGTTTAGTGCAT 57.087 37.500 0.00 0.00 43.33 3.96
4516 4921 6.927416 ACATTGATGTTGTGTGAATATGCTT 58.073 32.000 0.00 0.00 37.90 3.91
4615 5031 8.731605 GGCCAAATCTAAAGCCTAACTTATATC 58.268 37.037 0.00 0.00 42.34 1.63
4617 5033 7.002276 GGGCCAAATCTAAAGCCTAACTTATA 58.998 38.462 4.39 0.00 45.07 0.98
4666 5082 7.281774 AGACATTGCTCGAGATACAAAAATGAT 59.718 33.333 18.75 5.73 0.00 2.45
4727 5144 4.176271 TCTAGCAGATTGACACAACATCG 58.824 43.478 0.00 0.00 0.00 3.84
4785 5205 3.740631 TGCTATCAGTGCACTGGATAG 57.259 47.619 39.04 35.85 43.91 2.08
4894 5316 9.780413 GGAGCATAGAAAAAGAAAGATACTTTG 57.220 33.333 1.41 0.00 37.59 2.77
4933 5355 7.925483 TCAAATGAAAACATTTCACCGAAGAAT 59.075 29.630 7.61 0.00 32.97 2.40
4939 5361 7.042858 TGTTGATCAAATGAAAACATTTCACCG 60.043 33.333 10.35 0.91 32.96 4.94
4940 5362 8.140677 TGTTGATCAAATGAAAACATTTCACC 57.859 30.769 10.35 0.00 32.96 4.02
5026 5637 2.368439 TGTGTATAACTCGCGGTACCT 58.632 47.619 10.90 0.00 0.00 3.08
5075 5691 7.965045 AGATGAGATTTAGCAAACTCGTAAAC 58.035 34.615 0.00 0.00 32.81 2.01
5119 5735 7.001674 AGTGGTGTAGGAGTTAGATATGAGAG 58.998 42.308 0.00 0.00 0.00 3.20
5120 5736 6.912426 AGTGGTGTAGGAGTTAGATATGAGA 58.088 40.000 0.00 0.00 0.00 3.27
5121 5737 7.589958 AAGTGGTGTAGGAGTTAGATATGAG 57.410 40.000 0.00 0.00 0.00 2.90
5122 5738 9.656323 ATTAAGTGGTGTAGGAGTTAGATATGA 57.344 33.333 0.00 0.00 0.00 2.15
5225 5841 8.909923 TCATCGTAGATGAGAAATAACCAAGTA 58.090 33.333 8.48 0.00 45.12 2.24
5300 5916 7.066525 ACTCCTGAAACGAACAAAGTGAATAAA 59.933 33.333 0.00 0.00 0.00 1.40
5477 6093 1.378646 GTACCCCTTGAGCTTGCCC 60.379 63.158 0.00 0.00 0.00 5.36
5738 6354 1.202405 TGGTGATGACGGTGATGATCG 60.202 52.381 0.00 0.00 0.00 3.69
5831 6447 0.899019 TGCTGTACCCGATTAGTGCA 59.101 50.000 0.00 0.00 0.00 4.57
5894 6510 0.800631 TCAAATGAGCAGAAGCAGCG 59.199 50.000 0.00 0.00 45.49 5.18
5985 6601 5.050091 CAGTCAACGAATAGAACTGCTTTGT 60.050 40.000 0.00 0.00 0.00 2.83
6043 6659 1.204941 GCCATCCTCTCAGTACGTGTT 59.795 52.381 0.00 0.00 0.00 3.32
6100 6716 5.163530 TGTCCAGTAGTACTGTTTCGAAACA 60.164 40.000 34.56 34.56 44.50 2.83
6140 6756 0.959372 GCTTCATCACCTGTGCAGCT 60.959 55.000 0.00 0.00 0.00 4.24
6363 6986 3.253188 GTGCCTGTACTGATGCTCAAAAA 59.747 43.478 0.60 0.00 0.00 1.94
6364 6987 2.813754 GTGCCTGTACTGATGCTCAAAA 59.186 45.455 0.60 0.00 0.00 2.44
6365 6988 2.224499 TGTGCCTGTACTGATGCTCAAA 60.224 45.455 0.60 0.00 0.00 2.69
6366 6989 1.347378 TGTGCCTGTACTGATGCTCAA 59.653 47.619 0.60 0.00 0.00 3.02
6367 6990 0.975887 TGTGCCTGTACTGATGCTCA 59.024 50.000 0.60 2.09 0.00 4.26
6368 6991 2.005451 CTTGTGCCTGTACTGATGCTC 58.995 52.381 0.60 0.00 0.00 4.26
6369 6992 1.947678 GCTTGTGCCTGTACTGATGCT 60.948 52.381 0.60 0.00 0.00 3.79
6370 6993 0.449388 GCTTGTGCCTGTACTGATGC 59.551 55.000 0.60 0.00 0.00 3.91
6371 6994 0.723414 CGCTTGTGCCTGTACTGATG 59.277 55.000 0.60 0.00 35.36 3.07
6372 6995 1.021390 GCGCTTGTGCCTGTACTGAT 61.021 55.000 0.00 0.00 35.36 2.90
6373 6996 1.667830 GCGCTTGTGCCTGTACTGA 60.668 57.895 0.00 0.00 35.36 3.41
6374 6997 1.230635 AAGCGCTTGTGCCTGTACTG 61.231 55.000 24.40 0.00 35.36 2.74
6375 6998 0.320374 TAAGCGCTTGTGCCTGTACT 59.680 50.000 32.23 3.76 35.36 2.73
6376 6999 1.369625 ATAAGCGCTTGTGCCTGTAC 58.630 50.000 32.23 0.00 35.36 2.90
6377 7000 2.971660 TATAAGCGCTTGTGCCTGTA 57.028 45.000 32.23 10.34 35.36 2.74
6378 7001 2.332063 ATATAAGCGCTTGTGCCTGT 57.668 45.000 32.23 6.01 35.36 4.00
6379 7002 3.059597 GTGTATATAAGCGCTTGTGCCTG 60.060 47.826 32.23 0.00 35.36 4.85
6380 7003 3.131396 GTGTATATAAGCGCTTGTGCCT 58.869 45.455 32.23 16.45 35.36 4.75
6381 7004 2.096909 CGTGTATATAAGCGCTTGTGCC 60.097 50.000 32.23 17.05 35.36 5.01
6382 7005 2.659291 GCGTGTATATAAGCGCTTGTGC 60.659 50.000 32.23 19.27 45.48 4.57
6383 7006 2.408487 CGCGTGTATATAAGCGCTTGTG 60.408 50.000 32.23 15.21 46.56 3.33
6384 7007 1.784856 CGCGTGTATATAAGCGCTTGT 59.215 47.619 32.23 27.59 46.56 3.16
6385 7008 2.471072 CGCGTGTATATAAGCGCTTG 57.529 50.000 32.23 13.89 46.56 4.01
6390 7013 6.309436 TGAGTGTATACGCGTGTATATAAGC 58.691 40.000 26.67 19.49 43.52 3.09
6391 7014 7.639072 GGATGAGTGTATACGCGTGTATATAAG 59.361 40.741 26.67 0.00 43.52 1.73
6392 7015 7.335171 AGGATGAGTGTATACGCGTGTATATAA 59.665 37.037 26.67 17.48 43.52 0.98
6393 7016 6.820152 AGGATGAGTGTATACGCGTGTATATA 59.180 38.462 26.67 22.42 43.52 0.86
6394 7017 5.646793 AGGATGAGTGTATACGCGTGTATAT 59.353 40.000 26.67 14.50 43.52 0.86
6395 7018 4.999311 AGGATGAGTGTATACGCGTGTATA 59.001 41.667 24.59 21.82 41.50 1.47
6396 7019 3.819337 AGGATGAGTGTATACGCGTGTAT 59.181 43.478 24.59 23.84 43.62 2.29
6397 7020 3.208594 AGGATGAGTGTATACGCGTGTA 58.791 45.455 24.59 18.01 34.45 2.90
6398 7021 2.022195 AGGATGAGTGTATACGCGTGT 58.978 47.619 24.59 19.31 0.00 4.49
6399 7022 2.776312 AGGATGAGTGTATACGCGTG 57.224 50.000 24.59 0.00 0.00 5.34
6400 7023 4.517832 TCATAAGGATGAGTGTATACGCGT 59.482 41.667 19.17 19.17 37.15 6.01
6401 7024 5.043189 TCATAAGGATGAGTGTATACGCG 57.957 43.478 3.53 3.53 37.15 6.01
6402 7025 5.342525 CGTTCATAAGGATGAGTGTATACGC 59.657 44.000 8.42 8.42 43.03 4.42
6403 7026 5.342525 GCGTTCATAAGGATGAGTGTATACG 59.657 44.000 0.00 0.00 43.03 3.06
6404 7027 6.144080 GTGCGTTCATAAGGATGAGTGTATAC 59.856 42.308 0.00 0.00 43.03 1.47
6405 7028 6.183360 TGTGCGTTCATAAGGATGAGTGTATA 60.183 38.462 0.00 0.00 43.03 1.47
6406 7029 5.050490 GTGCGTTCATAAGGATGAGTGTAT 58.950 41.667 0.00 0.00 43.03 2.29
6407 7030 4.081917 TGTGCGTTCATAAGGATGAGTGTA 60.082 41.667 0.00 0.00 43.03 2.90
6408 7031 3.262420 GTGCGTTCATAAGGATGAGTGT 58.738 45.455 0.00 0.00 43.03 3.55
6409 7032 3.062639 GTGTGCGTTCATAAGGATGAGTG 59.937 47.826 0.00 0.00 43.03 3.51
6410 7033 3.262420 GTGTGCGTTCATAAGGATGAGT 58.738 45.455 0.00 0.00 43.03 3.41
6411 7034 3.062639 GTGTGTGCGTTCATAAGGATGAG 59.937 47.826 0.00 0.00 43.03 2.90
6412 7035 3.000041 GTGTGTGCGTTCATAAGGATGA 59.000 45.455 0.00 0.00 40.45 2.92
6413 7036 2.222796 CGTGTGTGCGTTCATAAGGATG 60.223 50.000 0.00 0.00 0.00 3.51
6414 7037 1.999735 CGTGTGTGCGTTCATAAGGAT 59.000 47.619 0.00 0.00 0.00 3.24
6415 7038 1.424403 CGTGTGTGCGTTCATAAGGA 58.576 50.000 0.00 0.00 0.00 3.36
6416 7039 0.179225 GCGTGTGTGCGTTCATAAGG 60.179 55.000 0.00 0.00 0.00 2.69
6417 7040 0.510790 TGCGTGTGTGCGTTCATAAG 59.489 50.000 0.00 0.00 37.81 1.73
6418 7041 0.233590 GTGCGTGTGTGCGTTCATAA 59.766 50.000 0.00 0.00 37.81 1.90
6419 7042 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
6420 7043 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
6421 7044 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
6422 7045 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
6423 7046 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
6426 7049 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
6427 7050 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
6428 7051 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
6429 7052 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
6430 7053 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
6431 7054 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
6432 7055 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
6433 7056 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
6434 7057 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
6435 7058 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
6436 7059 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
6437 7060 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
6438 7061 0.341961 TGTGCTCATAGGGGTAGGGT 59.658 55.000 0.00 0.00 0.00 4.34
6439 7062 1.625818 GATGTGCTCATAGGGGTAGGG 59.374 57.143 0.32 0.00 34.06 3.53
6440 7063 1.625818 GGATGTGCTCATAGGGGTAGG 59.374 57.143 0.32 0.00 34.06 3.18
6441 7064 1.273606 CGGATGTGCTCATAGGGGTAG 59.726 57.143 0.32 0.00 34.06 3.18
6442 7065 1.133294 TCGGATGTGCTCATAGGGGTA 60.133 52.381 0.32 0.00 34.06 3.69
6443 7066 0.398522 TCGGATGTGCTCATAGGGGT 60.399 55.000 0.32 0.00 34.06 4.95
6444 7067 0.319728 CTCGGATGTGCTCATAGGGG 59.680 60.000 0.32 0.00 34.06 4.79
6445 7068 1.271934 CTCTCGGATGTGCTCATAGGG 59.728 57.143 0.32 0.00 34.06 3.53
6446 7069 2.030363 GTCTCTCGGATGTGCTCATAGG 60.030 54.545 0.32 0.00 34.06 2.57
6447 7070 2.884012 AGTCTCTCGGATGTGCTCATAG 59.116 50.000 0.32 0.00 34.06 2.23
6448 7071 2.937519 AGTCTCTCGGATGTGCTCATA 58.062 47.619 0.32 0.00 34.06 2.15
6449 7072 1.774110 AGTCTCTCGGATGTGCTCAT 58.226 50.000 0.00 0.00 36.95 2.90
6450 7073 2.420058 TAGTCTCTCGGATGTGCTCA 57.580 50.000 0.00 0.00 0.00 4.26
6451 7074 2.542824 GCTTAGTCTCTCGGATGTGCTC 60.543 54.545 0.00 0.00 0.00 4.26
6452 7075 1.407258 GCTTAGTCTCTCGGATGTGCT 59.593 52.381 0.00 0.00 0.00 4.40
6453 7076 1.537135 GGCTTAGTCTCTCGGATGTGC 60.537 57.143 0.00 0.00 0.00 4.57
6454 7077 1.268794 CGGCTTAGTCTCTCGGATGTG 60.269 57.143 0.00 0.00 0.00 3.21
6455 7078 1.025812 CGGCTTAGTCTCTCGGATGT 58.974 55.000 0.00 0.00 0.00 3.06
6456 7079 0.312416 CCGGCTTAGTCTCTCGGATG 59.688 60.000 0.00 0.00 42.94 3.51
6457 7080 1.457009 GCCGGCTTAGTCTCTCGGAT 61.457 60.000 22.15 0.00 42.94 4.18
6458 7081 2.119655 GCCGGCTTAGTCTCTCGGA 61.120 63.158 22.15 0.00 42.94 4.55
6459 7082 1.739338 ATGCCGGCTTAGTCTCTCGG 61.739 60.000 29.70 0.00 43.13 4.63
6460 7083 0.952280 TATGCCGGCTTAGTCTCTCG 59.048 55.000 29.70 0.00 0.00 4.04
6461 7084 2.558795 TGATATGCCGGCTTAGTCTCTC 59.441 50.000 29.70 18.59 0.00 3.20
6462 7085 2.598565 TGATATGCCGGCTTAGTCTCT 58.401 47.619 29.70 10.12 0.00 3.10
6463 7086 3.194542 AGATGATATGCCGGCTTAGTCTC 59.805 47.826 29.70 19.28 0.00 3.36
6464 7087 3.169099 AGATGATATGCCGGCTTAGTCT 58.831 45.455 29.70 23.43 0.00 3.24
6465 7088 3.601443 AGATGATATGCCGGCTTAGTC 57.399 47.619 29.70 21.82 0.00 2.59
6466 7089 3.324846 TCAAGATGATATGCCGGCTTAGT 59.675 43.478 29.70 15.20 0.00 2.24
6467 7090 3.930336 TCAAGATGATATGCCGGCTTAG 58.070 45.455 29.70 11.66 0.00 2.18
6468 7091 3.578282 TCTCAAGATGATATGCCGGCTTA 59.422 43.478 29.70 25.95 0.00 3.09
6469 7092 2.369860 TCTCAAGATGATATGCCGGCTT 59.630 45.455 29.70 24.47 0.00 4.35
6470 7093 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
6471 7094 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
6472 7095 6.820152 TCATAAATCTCAAGATGATATGCCGG 59.180 38.462 0.00 0.00 36.32 6.13
6473 7096 7.838771 TCATAAATCTCAAGATGATATGCCG 57.161 36.000 15.00 0.00 36.32 5.69
6474 7097 9.228949 ACTTCATAAATCTCAAGATGATATGCC 57.771 33.333 15.00 0.00 36.32 4.40
6478 7101 9.770097 GGTGACTTCATAAATCTCAAGATGATA 57.230 33.333 0.00 0.00 34.49 2.15
6479 7102 8.270030 TGGTGACTTCATAAATCTCAAGATGAT 58.730 33.333 0.00 0.00 34.49 2.45
6480 7103 7.623630 TGGTGACTTCATAAATCTCAAGATGA 58.376 34.615 0.00 0.00 34.49 2.92
6481 7104 7.854557 TGGTGACTTCATAAATCTCAAGATG 57.145 36.000 0.00 0.00 34.49 2.90
6482 7105 9.775854 CTATGGTGACTTCATAAATCTCAAGAT 57.224 33.333 0.00 0.00 36.07 2.40
6483 7106 8.206867 CCTATGGTGACTTCATAAATCTCAAGA 58.793 37.037 0.00 0.00 0.00 3.02
6484 7107 7.041508 GCCTATGGTGACTTCATAAATCTCAAG 60.042 40.741 0.00 0.00 0.00 3.02
6485 7108 6.767902 GCCTATGGTGACTTCATAAATCTCAA 59.232 38.462 0.00 0.00 0.00 3.02
6486 7109 6.291377 GCCTATGGTGACTTCATAAATCTCA 58.709 40.000 0.00 0.00 0.00 3.27
6487 7110 5.406780 CGCCTATGGTGACTTCATAAATCTC 59.593 44.000 0.00 0.00 34.74 2.75
6488 7111 5.300752 CGCCTATGGTGACTTCATAAATCT 58.699 41.667 0.00 0.00 34.74 2.40
6489 7112 4.083802 GCGCCTATGGTGACTTCATAAATC 60.084 45.833 0.00 0.00 34.74 2.17
6490 7113 3.815401 GCGCCTATGGTGACTTCATAAAT 59.185 43.478 0.00 0.00 34.74 1.40
6491 7114 3.202906 GCGCCTATGGTGACTTCATAAA 58.797 45.455 0.00 0.00 34.74 1.40
6492 7115 2.484770 GGCGCCTATGGTGACTTCATAA 60.485 50.000 22.15 0.00 38.38 1.90
6493 7116 1.070134 GGCGCCTATGGTGACTTCATA 59.930 52.381 22.15 0.00 38.38 2.15
6494 7117 0.179045 GGCGCCTATGGTGACTTCAT 60.179 55.000 22.15 0.00 38.38 2.57
6495 7118 1.220749 GGCGCCTATGGTGACTTCA 59.779 57.895 22.15 0.00 38.38 3.02
6496 7119 4.126524 GGCGCCTATGGTGACTTC 57.873 61.111 22.15 0.00 38.38 3.01
6499 7122 2.279517 CGAGGCGCCTATGGTGAC 60.280 66.667 32.97 14.51 42.50 3.67
6500 7123 2.758327 ACGAGGCGCCTATGGTGA 60.758 61.111 32.97 0.00 34.74 4.02
6501 7124 2.279517 GACGAGGCGCCTATGGTG 60.280 66.667 32.97 18.94 36.10 4.17
6502 7125 3.900892 CGACGAGGCGCCTATGGT 61.901 66.667 32.97 26.91 0.00 3.55
6503 7126 3.825833 GACGACGAGGCGCCTATGG 62.826 68.421 32.97 23.64 33.86 2.74
6504 7127 2.353607 GACGACGAGGCGCCTATG 60.354 66.667 32.97 27.02 33.86 2.23
6526 7149 0.966920 TCAGTGGGAGAAGACGTTCC 59.033 55.000 0.00 0.00 32.48 3.62
6527 7150 2.814280 TTCAGTGGGAGAAGACGTTC 57.186 50.000 0.00 0.00 0.00 3.95
6528 7151 2.807108 GCTTTCAGTGGGAGAAGACGTT 60.807 50.000 0.00 0.00 0.00 3.99
6529 7152 1.270358 GCTTTCAGTGGGAGAAGACGT 60.270 52.381 0.00 0.00 0.00 4.34
6530 7153 1.433534 GCTTTCAGTGGGAGAAGACG 58.566 55.000 0.00 0.00 0.00 4.18
6531 7154 1.433534 CGCTTTCAGTGGGAGAAGAC 58.566 55.000 0.00 0.00 0.00 3.01
6532 7155 0.320771 GCGCTTTCAGTGGGAGAAGA 60.321 55.000 0.00 0.00 0.00 2.87
6533 7156 0.603707 TGCGCTTTCAGTGGGAGAAG 60.604 55.000 9.73 0.00 0.00 2.85
6534 7157 0.036732 ATGCGCTTTCAGTGGGAGAA 59.963 50.000 9.73 0.00 0.00 2.87
6535 7158 0.391661 GATGCGCTTTCAGTGGGAGA 60.392 55.000 9.73 0.00 0.00 3.71
6536 7159 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
6537 7160 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
6538 7161 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
6549 7172 1.010797 CAGGATTTTCGGCGATGCG 60.011 57.895 11.76 0.00 0.00 4.73
6550 7173 0.732571 TTCAGGATTTTCGGCGATGC 59.267 50.000 11.76 0.31 0.00 3.91
6551 7174 3.698029 ATTTCAGGATTTTCGGCGATG 57.302 42.857 11.76 4.79 0.00 3.84
6552 7175 5.828299 TTTATTTCAGGATTTTCGGCGAT 57.172 34.783 11.76 0.00 0.00 4.58
6553 7176 5.220970 GGATTTATTTCAGGATTTTCGGCGA 60.221 40.000 4.99 4.99 0.00 5.54
6554 7177 4.976116 GGATTTATTTCAGGATTTTCGGCG 59.024 41.667 0.00 0.00 0.00 6.46
6555 7178 5.901552 TGGATTTATTTCAGGATTTTCGGC 58.098 37.500 0.00 0.00 0.00 5.54
6564 7187 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
6565 7188 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
6566 7189 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
6567 7190 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
6568 7191 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
6569 7192 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
6570 7193 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
6571 7194 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
6572 7195 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
6573 7196 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
6574 7197 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
6575 7198 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
6576 7199 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
6577 7200 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
6578 7201 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
6579 7202 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
6580 7203 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
6581 7204 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
6582 7205 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
6583 7206 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
6584 7207 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
6585 7208 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
6586 7209 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
6587 7210 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
6588 7211 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
6589 7212 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
6590 7213 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
6591 7214 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
6607 7230 1.522900 AGTATCCCCAACCCATCAGG 58.477 55.000 0.00 0.00 43.78 3.86
6608 7231 3.071602 CAGTAGTATCCCCAACCCATCAG 59.928 52.174 0.00 0.00 0.00 2.90
6609 7232 3.045634 CAGTAGTATCCCCAACCCATCA 58.954 50.000 0.00 0.00 0.00 3.07
6610 7233 3.046374 ACAGTAGTATCCCCAACCCATC 58.954 50.000 0.00 0.00 0.00 3.51
6611 7234 3.046374 GACAGTAGTATCCCCAACCCAT 58.954 50.000 0.00 0.00 0.00 4.00
6612 7235 2.474112 GACAGTAGTATCCCCAACCCA 58.526 52.381 0.00 0.00 0.00 4.51
6613 7236 1.767088 GGACAGTAGTATCCCCAACCC 59.233 57.143 0.00 0.00 0.00 4.11
6614 7237 2.169978 GTGGACAGTAGTATCCCCAACC 59.830 54.545 0.00 0.00 33.69 3.77
6615 7238 2.169978 GGTGGACAGTAGTATCCCCAAC 59.830 54.545 0.00 0.00 33.69 3.77
6616 7239 2.045326 AGGTGGACAGTAGTATCCCCAA 59.955 50.000 5.50 0.00 33.69 4.12
6617 7240 1.649633 AGGTGGACAGTAGTATCCCCA 59.350 52.381 5.50 0.00 33.69 4.96
6618 7241 2.473576 AGGTGGACAGTAGTATCCCC 57.526 55.000 0.00 0.00 33.69 4.81
6619 7242 3.640498 GGTTAGGTGGACAGTAGTATCCC 59.360 52.174 0.00 0.00 33.69 3.85
6620 7243 4.284178 TGGTTAGGTGGACAGTAGTATCC 58.716 47.826 0.00 0.00 35.37 2.59
6621 7244 5.834204 AGATGGTTAGGTGGACAGTAGTATC 59.166 44.000 0.00 0.00 0.00 2.24
6622 7245 5.778542 AGATGGTTAGGTGGACAGTAGTAT 58.221 41.667 0.00 0.00 0.00 2.12
6623 7246 5.198965 GAGATGGTTAGGTGGACAGTAGTA 58.801 45.833 0.00 0.00 0.00 1.82
6624 7247 4.024670 GAGATGGTTAGGTGGACAGTAGT 58.975 47.826 0.00 0.00 0.00 2.73
6625 7248 4.023980 TGAGATGGTTAGGTGGACAGTAG 58.976 47.826 0.00 0.00 0.00 2.57
6626 7249 4.055710 TGAGATGGTTAGGTGGACAGTA 57.944 45.455 0.00 0.00 0.00 2.74
6627 7250 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
6628 7251 3.600388 GTTGAGATGGTTAGGTGGACAG 58.400 50.000 0.00 0.00 0.00 3.51
6629 7252 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
6630 7253 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
6631 7254 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
6632 7255 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
6633 7256 3.338249 CTGTGGTTGAGATGGTTAGGTG 58.662 50.000 0.00 0.00 0.00 4.00
6634 7257 2.305927 CCTGTGGTTGAGATGGTTAGGT 59.694 50.000 0.00 0.00 0.00 3.08
6635 7258 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
6636 7259 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
6656 7279 3.081061 AGCATTATGAGTTGCGAACCAA 58.919 40.909 0.00 0.00 43.61 3.67
6657 7280 2.419673 CAGCATTATGAGTTGCGAACCA 59.580 45.455 0.00 0.00 43.61 3.67
6658 7281 2.420022 ACAGCATTATGAGTTGCGAACC 59.580 45.455 0.00 0.00 43.61 3.62
6659 7282 3.747099 ACAGCATTATGAGTTGCGAAC 57.253 42.857 0.00 0.00 43.61 3.95
6660 7283 5.163764 CCTTTACAGCATTATGAGTTGCGAA 60.164 40.000 0.00 0.00 43.61 4.70
6661 7284 4.332543 CCTTTACAGCATTATGAGTTGCGA 59.667 41.667 0.00 0.00 43.61 5.10
6662 7285 4.332543 TCCTTTACAGCATTATGAGTTGCG 59.667 41.667 0.00 0.00 43.61 4.85
6663 7286 5.586243 TCTCCTTTACAGCATTATGAGTTGC 59.414 40.000 0.00 0.00 39.17 4.17
6664 7287 7.615582 TTCTCCTTTACAGCATTATGAGTTG 57.384 36.000 0.00 0.00 0.00 3.16
6673 7296 9.851686 TGATGTTTATATTCTCCTTTACAGCAT 57.148 29.630 0.00 0.00 0.00 3.79
6674 7297 9.851686 ATGATGTTTATATTCTCCTTTACAGCA 57.148 29.630 0.00 0.00 35.51 4.41
6715 7338 4.142337 TGTGCATTGTAATCATGCTTGAGG 60.142 41.667 8.40 0.00 41.52 3.86
6716 7339 4.796830 GTGTGCATTGTAATCATGCTTGAG 59.203 41.667 8.40 0.00 41.52 3.02
6717 7340 4.672283 CGTGTGCATTGTAATCATGCTTGA 60.672 41.667 4.57 4.57 41.52 3.02
6718 7341 3.544682 CGTGTGCATTGTAATCATGCTTG 59.455 43.478 6.46 0.00 41.52 4.01
6719 7342 3.427909 CCGTGTGCATTGTAATCATGCTT 60.428 43.478 6.46 0.00 41.52 3.91
6720 7343 2.097954 CCGTGTGCATTGTAATCATGCT 59.902 45.455 6.46 0.00 41.52 3.79
6721 7344 2.159393 ACCGTGTGCATTGTAATCATGC 60.159 45.455 0.00 0.00 41.35 4.06
6722 7345 3.126686 TGACCGTGTGCATTGTAATCATG 59.873 43.478 0.00 0.00 0.00 3.07
6723 7346 3.342719 TGACCGTGTGCATTGTAATCAT 58.657 40.909 0.00 0.00 0.00 2.45
6724 7347 2.772287 TGACCGTGTGCATTGTAATCA 58.228 42.857 0.00 0.00 0.00 2.57
6725 7348 3.058570 TGTTGACCGTGTGCATTGTAATC 60.059 43.478 0.00 0.00 0.00 1.75
6726 7349 2.881513 TGTTGACCGTGTGCATTGTAAT 59.118 40.909 0.00 0.00 0.00 1.89
6750 7373 5.786401 ATTCTATCTTCTGTGTGCGTTTC 57.214 39.130 0.00 0.00 0.00 2.78
6755 7378 6.955963 CGTGTTTTATTCTATCTTCTGTGTGC 59.044 38.462 0.00 0.00 0.00 4.57
6756 7379 8.162880 GTCGTGTTTTATTCTATCTTCTGTGTG 58.837 37.037 0.00 0.00 0.00 3.82
6796 7419 5.764487 TGTTGCATGTTGTAGTTCAATCA 57.236 34.783 0.00 0.00 38.38 2.57
6823 7446 4.214971 GCATTTCTCAGAGTGTGTTGATGT 59.785 41.667 0.00 0.00 0.00 3.06
6832 7455 6.210796 TGTTTGAAATGCATTTCTCAGAGTG 58.789 36.000 38.33 0.00 44.85 3.51
6836 7459 6.831727 TGTTGTTTGAAATGCATTTCTCAG 57.168 33.333 38.33 0.00 44.85 3.35
6859 7482 1.609208 ATTCACTTCTTGCAGGCGTT 58.391 45.000 0.00 0.00 0.00 4.84
6879 7502 3.305539 GGTGACAATGACACATGCACATT 60.306 43.478 16.57 0.00 39.65 2.71
6918 7541 1.376683 CCGGTCCCTTGAAATGCGA 60.377 57.895 0.00 0.00 0.00 5.10
6919 7542 2.406616 CCCGGTCCCTTGAAATGCG 61.407 63.158 0.00 0.00 0.00 4.73
6920 7543 2.052104 CCCCGGTCCCTTGAAATGC 61.052 63.158 0.00 0.00 0.00 3.56
6934 7557 0.245539 TCGCTTCTAGTTTCACCCCG 59.754 55.000 0.00 0.00 0.00 5.73
6951 7574 1.075542 TCATACGCAAGGCAGTTTCG 58.924 50.000 0.00 0.00 46.39 3.46
6952 7575 3.764885 AATCATACGCAAGGCAGTTTC 57.235 42.857 0.00 0.00 46.39 2.78
6953 7576 4.519540 AAAATCATACGCAAGGCAGTTT 57.480 36.364 0.00 0.00 46.39 2.66
6954 7577 4.519540 AAAAATCATACGCAAGGCAGTT 57.480 36.364 0.00 0.00 46.39 3.16
6974 7597 9.839817 TCTTGTCATATAAAATCGTATGGGAAA 57.160 29.630 0.00 0.00 0.00 3.13
6975 7598 9.268268 GTCTTGTCATATAAAATCGTATGGGAA 57.732 33.333 0.00 0.00 0.00 3.97
6976 7599 8.425703 TGTCTTGTCATATAAAATCGTATGGGA 58.574 33.333 0.00 0.00 0.00 4.37
6977 7600 8.495949 GTGTCTTGTCATATAAAATCGTATGGG 58.504 37.037 0.00 0.00 0.00 4.00
6978 7601 9.040939 TGTGTCTTGTCATATAAAATCGTATGG 57.959 33.333 0.00 0.00 0.00 2.74
6980 7603 9.261180 CCTGTGTCTTGTCATATAAAATCGTAT 57.739 33.333 0.00 0.00 0.00 3.06
6981 7604 7.223971 GCCTGTGTCTTGTCATATAAAATCGTA 59.776 37.037 0.00 0.00 0.00 3.43
6982 7605 6.037172 GCCTGTGTCTTGTCATATAAAATCGT 59.963 38.462 0.00 0.00 0.00 3.73
6983 7606 6.422223 GCCTGTGTCTTGTCATATAAAATCG 58.578 40.000 0.00 0.00 0.00 3.34
6984 7607 6.238759 GGGCCTGTGTCTTGTCATATAAAATC 60.239 42.308 0.84 0.00 0.00 2.17
6985 7608 5.594317 GGGCCTGTGTCTTGTCATATAAAAT 59.406 40.000 0.84 0.00 0.00 1.82
6986 7609 4.947388 GGGCCTGTGTCTTGTCATATAAAA 59.053 41.667 0.84 0.00 0.00 1.52
6987 7610 4.523083 GGGCCTGTGTCTTGTCATATAAA 58.477 43.478 0.84 0.00 0.00 1.40
6988 7611 3.431626 CGGGCCTGTGTCTTGTCATATAA 60.432 47.826 2.29 0.00 0.00 0.98
6989 7612 2.102420 CGGGCCTGTGTCTTGTCATATA 59.898 50.000 2.29 0.00 0.00 0.86
6990 7613 1.134401 CGGGCCTGTGTCTTGTCATAT 60.134 52.381 2.29 0.00 0.00 1.78
6991 7614 0.249120 CGGGCCTGTGTCTTGTCATA 59.751 55.000 2.29 0.00 0.00 2.15
6992 7615 1.003355 CGGGCCTGTGTCTTGTCAT 60.003 57.895 2.29 0.00 0.00 3.06
6993 7616 1.978455 AACGGGCCTGTGTCTTGTCA 61.978 55.000 20.54 0.00 0.00 3.58
6994 7617 1.227853 AACGGGCCTGTGTCTTGTC 60.228 57.895 20.54 0.00 0.00 3.18
6995 7618 1.227853 GAACGGGCCTGTGTCTTGT 60.228 57.895 20.54 0.00 0.00 3.16
6996 7619 1.966451 GGAACGGGCCTGTGTCTTG 60.966 63.158 20.54 0.00 0.00 3.02
6997 7620 2.430367 GGAACGGGCCTGTGTCTT 59.570 61.111 20.54 0.95 0.00 3.01
6998 7621 3.637273 GGGAACGGGCCTGTGTCT 61.637 66.667 20.54 1.42 0.00 3.41
6999 7622 3.485346 TTGGGAACGGGCCTGTGTC 62.485 63.158 20.54 16.97 0.00 3.67
7000 7623 3.494254 TTGGGAACGGGCCTGTGT 61.494 61.111 20.54 8.64 0.00 3.72
7001 7624 2.983592 GTTGGGAACGGGCCTGTG 60.984 66.667 20.54 2.89 0.00 3.66
7015 7638 0.820074 TGTAGTGGGCCCAAACGTTG 60.820 55.000 30.64 0.00 0.00 4.10
7016 7639 0.820482 GTGTAGTGGGCCCAAACGTT 60.820 55.000 30.64 12.58 0.00 3.99
7017 7640 1.228033 GTGTAGTGGGCCCAAACGT 60.228 57.895 30.64 14.46 0.00 3.99
7018 7641 1.969589 GGTGTAGTGGGCCCAAACG 60.970 63.158 30.64 0.00 0.00 3.60
7019 7642 0.893727 CTGGTGTAGTGGGCCCAAAC 60.894 60.000 30.64 27.33 0.00 2.93
7020 7643 1.063070 TCTGGTGTAGTGGGCCCAAA 61.063 55.000 30.64 16.10 0.00 3.28
7021 7644 1.063070 TTCTGGTGTAGTGGGCCCAA 61.063 55.000 30.64 9.77 0.00 4.12
7022 7645 1.462432 TTCTGGTGTAGTGGGCCCA 60.462 57.895 24.45 24.45 0.00 5.36
7023 7646 1.002502 GTTCTGGTGTAGTGGGCCC 60.003 63.158 17.59 17.59 0.00 5.80
7024 7647 0.321653 CTGTTCTGGTGTAGTGGGCC 60.322 60.000 0.00 0.00 0.00 5.80
7025 7648 0.396811 ACTGTTCTGGTGTAGTGGGC 59.603 55.000 0.00 0.00 0.00 5.36
7026 7649 1.971357 AGACTGTTCTGGTGTAGTGGG 59.029 52.381 0.00 0.00 0.00 4.61
7027 7650 3.032017 CAGACTGTTCTGGTGTAGTGG 57.968 52.381 0.00 0.00 45.06 4.00
7037 7660 0.109689 GCGTACGAGCAGACTGTTCT 60.110 55.000 21.65 7.02 37.05 3.01
7038 7661 0.386858 TGCGTACGAGCAGACTGTTC 60.387 55.000 21.65 9.13 42.92 3.18
7039 7662 1.658114 TGCGTACGAGCAGACTGTT 59.342 52.632 21.65 0.00 42.92 3.16
7040 7663 3.351450 TGCGTACGAGCAGACTGT 58.649 55.556 21.65 0.00 42.92 3.55
7046 7669 1.979897 TACGATTTTGCGTACGAGCA 58.020 45.000 21.65 5.23 43.61 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.