Multiple sequence alignment - TraesCS3B01G270600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G270600 chr3B 100.000 3089 0 0 1 3089 436377606 436374518 0.000000e+00 5705
1 TraesCS3B01G270600 chr3B 94.639 858 43 3 1 855 21574752 21573895 0.000000e+00 1327
2 TraesCS3B01G270600 chr7B 95.508 2449 94 11 1 2437 101715693 101718137 0.000000e+00 3899
3 TraesCS3B01G270600 chr7B 93.435 1112 61 6 1492 2593 60578239 60577130 0.000000e+00 1639
4 TraesCS3B01G270600 chr7B 91.060 481 40 3 2610 3089 13796806 13796328 0.000000e+00 647
5 TraesCS3B01G270600 chr5B 97.458 1495 37 1 1 1494 10497109 10498603 0.000000e+00 2549
6 TraesCS3B01G270600 chr5B 94.324 1110 51 4 1492 2593 10498891 10499996 0.000000e+00 1690
7 TraesCS3B01G270600 chr5B 94.137 921 48 4 1 916 49393209 49394128 0.000000e+00 1397
8 TraesCS3B01G270600 chr5B 90.760 487 40 5 2605 3089 381711710 381712193 0.000000e+00 645
9 TraesCS3B01G270600 chr5B 90.852 481 40 4 2610 3089 187211104 187211581 2.600000e-180 641
10 TraesCS3B01G270600 chr2B 96.858 1496 45 2 1 1494 22381482 22382977 0.000000e+00 2501
11 TraesCS3B01G270600 chr2B 94.239 1111 52 4 1492 2593 22383265 22384372 0.000000e+00 1687
12 TraesCS3B01G270600 chr4B 94.674 1502 55 15 1 1494 560023742 560022258 0.000000e+00 2307
13 TraesCS3B01G270600 chr4B 94.599 1111 49 6 1492 2593 531453532 531454640 0.000000e+00 1709
14 TraesCS3B01G270600 chr4B 94.522 858 44 3 1 855 108080366 108081223 0.000000e+00 1321
15 TraesCS3B01G270600 chr1D 94.456 1497 54 11 1 1488 417758572 417760048 0.000000e+00 2278
16 TraesCS3B01G270600 chr1D 90.664 482 40 5 2610 3089 8053795 8053317 1.210000e-178 636
17 TraesCS3B01G270600 chr5A 93.729 1499 67 13 1 1494 693881061 693879585 0.000000e+00 2222
18 TraesCS3B01G270600 chr6D 94.217 1366 48 12 141 1494 56529 55183 0.000000e+00 2056
19 TraesCS3B01G270600 chr1B 94.324 1110 54 3 1492 2593 678501280 678502388 0.000000e+00 1692
20 TraesCS3B01G270600 chr1B 97.426 777 16 2 719 1494 678500221 678500994 0.000000e+00 1321
21 TraesCS3B01G270600 chr1B 92.324 482 33 4 2610 3089 544736850 544737329 0.000000e+00 682
22 TraesCS3B01G270600 chr1B 91.684 481 37 3 2610 3089 389742069 389742547 0.000000e+00 664
23 TraesCS3B01G270600 chr1B 90.664 482 39 6 2608 3086 374814432 374814910 1.210000e-178 636
24 TraesCS3B01G270600 chr4D 94.255 1114 51 7 1492 2593 437398576 437397464 0.000000e+00 1690
25 TraesCS3B01G270600 chr7A 92.896 1112 69 5 1492 2593 114451263 114450152 0.000000e+00 1607
26 TraesCS3B01G270600 chr7A 92.446 1112 72 7 1492 2593 321839082 321837973 0.000000e+00 1578
27 TraesCS3B01G270600 chr6B 94.639 858 40 5 1 855 648850629 648851483 0.000000e+00 1325
28 TraesCS3B01G270600 chr6B 94.522 858 42 4 1 855 648886677 648887532 0.000000e+00 1319
29 TraesCS3B01G270600 chr6B 92.531 482 31 5 2610 3089 161583979 161584457 0.000000e+00 686
30 TraesCS3B01G270600 chr6B 91.632 478 37 3 2610 3086 152212114 152212589 0.000000e+00 658
31 TraesCS3B01G270600 chr2D 96.831 789 19 5 711 1494 573297950 573298737 0.000000e+00 1314


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G270600 chr3B 436374518 436377606 3088 True 5705.0 5705 100.0000 1 3089 1 chr3B.!!$R2 3088
1 TraesCS3B01G270600 chr3B 21573895 21574752 857 True 1327.0 1327 94.6390 1 855 1 chr3B.!!$R1 854
2 TraesCS3B01G270600 chr7B 101715693 101718137 2444 False 3899.0 3899 95.5080 1 2437 1 chr7B.!!$F1 2436
3 TraesCS3B01G270600 chr7B 60577130 60578239 1109 True 1639.0 1639 93.4350 1492 2593 1 chr7B.!!$R2 1101
4 TraesCS3B01G270600 chr5B 10497109 10499996 2887 False 2119.5 2549 95.8910 1 2593 2 chr5B.!!$F4 2592
5 TraesCS3B01G270600 chr5B 49393209 49394128 919 False 1397.0 1397 94.1370 1 916 1 chr5B.!!$F1 915
6 TraesCS3B01G270600 chr2B 22381482 22384372 2890 False 2094.0 2501 95.5485 1 2593 2 chr2B.!!$F1 2592
7 TraesCS3B01G270600 chr4B 560022258 560023742 1484 True 2307.0 2307 94.6740 1 1494 1 chr4B.!!$R1 1493
8 TraesCS3B01G270600 chr4B 531453532 531454640 1108 False 1709.0 1709 94.5990 1492 2593 1 chr4B.!!$F2 1101
9 TraesCS3B01G270600 chr4B 108080366 108081223 857 False 1321.0 1321 94.5220 1 855 1 chr4B.!!$F1 854
10 TraesCS3B01G270600 chr1D 417758572 417760048 1476 False 2278.0 2278 94.4560 1 1488 1 chr1D.!!$F1 1487
11 TraesCS3B01G270600 chr5A 693879585 693881061 1476 True 2222.0 2222 93.7290 1 1494 1 chr5A.!!$R1 1493
12 TraesCS3B01G270600 chr6D 55183 56529 1346 True 2056.0 2056 94.2170 141 1494 1 chr6D.!!$R1 1353
13 TraesCS3B01G270600 chr1B 678500221 678502388 2167 False 1506.5 1692 95.8750 719 2593 2 chr1B.!!$F4 1874
14 TraesCS3B01G270600 chr4D 437397464 437398576 1112 True 1690.0 1690 94.2550 1492 2593 1 chr4D.!!$R1 1101
15 TraesCS3B01G270600 chr7A 114450152 114451263 1111 True 1607.0 1607 92.8960 1492 2593 1 chr7A.!!$R1 1101
16 TraesCS3B01G270600 chr7A 321837973 321839082 1109 True 1578.0 1578 92.4460 1492 2593 1 chr7A.!!$R2 1101
17 TraesCS3B01G270600 chr6B 648850629 648851483 854 False 1325.0 1325 94.6390 1 855 1 chr6B.!!$F3 854
18 TraesCS3B01G270600 chr6B 648886677 648887532 855 False 1319.0 1319 94.5220 1 855 1 chr6B.!!$F4 854
19 TraesCS3B01G270600 chr2D 573297950 573298737 787 False 1314.0 1314 96.8310 711 1494 1 chr2D.!!$F1 783

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
53 56 0.034089 GCCTCTGCCCACCTACAATT 60.034 55.000 0.0 0.0 0.0 2.32 F
1044 1082 3.776969 TCTTGCAGGTATGACTCATCCTT 59.223 43.478 0.0 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 2340 1.068402 TCCTTGTCGCACGAACGAATA 60.068 47.619 6.14 0.0 44.93 1.75 R
2809 3446 0.107643 TTGGTGAAGTGATCCGTGCA 59.892 50.000 0.00 0.0 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 56 0.034089 GCCTCTGCCCACCTACAATT 60.034 55.000 0.00 0.00 0.00 2.32
207 210 5.932619 TCCTGCTTCAAGTACTAGCATAA 57.067 39.130 17.06 7.59 43.33 1.90
782 819 9.003658 CAGTAATGTGTATTCCTCTCTTTTTGT 57.996 33.333 0.00 0.00 0.00 2.83
918 955 6.153170 TCAGTAAATGTGTACGTCCCATTCTA 59.847 38.462 0.00 0.00 0.00 2.10
1044 1082 3.776969 TCTTGCAGGTATGACTCATCCTT 59.223 43.478 0.00 0.00 0.00 3.36
1071 1109 3.813166 TCTTACTTCGCCTTTGTTTCCTG 59.187 43.478 0.00 0.00 0.00 3.86
1717 2340 1.675641 GCGGCAGTGTCTCCCATTT 60.676 57.895 0.00 0.00 0.00 2.32
1848 2477 1.652947 ACCCTACTGGATTTGGACGT 58.347 50.000 0.00 0.00 38.00 4.34
1858 2487 2.228822 GGATTTGGACGTTGACAAGCAT 59.771 45.455 0.00 0.00 0.00 3.79
2010 2639 2.047002 TGATCGTCCAGGTGATCGTA 57.953 50.000 15.40 2.01 43.10 3.43
2112 2741 4.079970 CTCCGAGCCTTGGTAGATACATA 58.920 47.826 0.00 0.00 0.00 2.29
2244 2873 6.527057 TGTTCAATGTTGCATCCATGAATA 57.473 33.333 12.63 9.07 0.00 1.75
2255 2884 4.497006 GCATCCATGAATAGTGCAAGTGTC 60.497 45.833 0.00 0.00 35.93 3.67
2290 2919 7.542130 CCTGTGACCTTAATTTATTTTGCACTC 59.458 37.037 0.00 0.00 0.00 3.51
2336 2965 8.139350 TCCATGAATGCTGCATCTAATTTTTAG 58.861 33.333 16.55 0.00 0.00 1.85
2568 3205 1.802960 TGTAGCGCGATACTAGTAGCC 59.197 52.381 31.61 6.74 0.00 3.93
2569 3206 1.802960 GTAGCGCGATACTAGTAGCCA 59.197 52.381 26.07 0.00 0.00 4.75
2570 3207 1.315690 AGCGCGATACTAGTAGCCAA 58.684 50.000 12.10 0.00 0.00 4.52
2571 3208 1.001597 AGCGCGATACTAGTAGCCAAC 60.002 52.381 12.10 2.19 0.00 3.77
2572 3209 1.001597 GCGCGATACTAGTAGCCAACT 60.002 52.381 12.10 0.00 42.62 3.16
2583 3220 2.845752 TAGCCAACTTACCCGCGCTG 62.846 60.000 5.56 0.00 0.00 5.18
2593 3230 3.905678 CCGCGCTGCTAGTAGCCT 61.906 66.667 24.74 0.00 41.51 4.58
2594 3231 2.105128 CGCGCTGCTAGTAGCCTT 59.895 61.111 24.74 0.00 41.51 4.35
2595 3232 1.519455 CGCGCTGCTAGTAGCCTTT 60.519 57.895 24.74 0.00 41.51 3.11
2596 3233 1.084370 CGCGCTGCTAGTAGCCTTTT 61.084 55.000 24.74 0.00 41.51 2.27
2597 3234 0.653114 GCGCTGCTAGTAGCCTTTTC 59.347 55.000 24.74 7.41 41.51 2.29
2598 3235 1.291132 CGCTGCTAGTAGCCTTTTCC 58.709 55.000 24.74 0.00 41.51 3.13
2599 3236 1.669604 GCTGCTAGTAGCCTTTTCCC 58.330 55.000 21.02 0.00 41.51 3.97
2600 3237 1.210722 GCTGCTAGTAGCCTTTTCCCT 59.789 52.381 21.02 0.00 41.51 4.20
2601 3238 2.434702 GCTGCTAGTAGCCTTTTCCCTA 59.565 50.000 21.02 0.00 41.51 3.53
2602 3239 3.493524 GCTGCTAGTAGCCTTTTCCCTAG 60.494 52.174 21.02 7.71 41.51 3.02
2603 3240 3.707102 CTGCTAGTAGCCTTTTCCCTAGT 59.293 47.826 19.41 0.00 41.51 2.57
2604 3241 4.875389 TGCTAGTAGCCTTTTCCCTAGTA 58.125 43.478 19.41 0.00 41.51 1.82
2605 3242 4.894114 TGCTAGTAGCCTTTTCCCTAGTAG 59.106 45.833 19.41 0.00 41.51 2.57
2606 3243 4.894705 GCTAGTAGCCTTTTCCCTAGTAGT 59.105 45.833 11.33 0.00 38.74 2.73
2607 3244 5.221283 GCTAGTAGCCTTTTCCCTAGTAGTG 60.221 48.000 11.33 0.00 38.74 2.74
2608 3245 4.944177 AGTAGCCTTTTCCCTAGTAGTGA 58.056 43.478 0.00 0.00 0.00 3.41
2609 3246 4.957327 AGTAGCCTTTTCCCTAGTAGTGAG 59.043 45.833 0.00 0.00 0.00 3.51
2610 3247 3.108376 AGCCTTTTCCCTAGTAGTGAGG 58.892 50.000 0.00 0.00 0.00 3.86
2618 3255 1.614413 CCTAGTAGTGAGGGCGAATCC 59.386 57.143 0.00 0.00 0.00 3.01
2619 3256 2.588620 CTAGTAGTGAGGGCGAATCCT 58.411 52.381 0.00 0.00 40.43 3.24
2620 3257 2.750141 AGTAGTGAGGGCGAATCCTA 57.250 50.000 0.00 0.00 37.25 2.94
2621 3258 2.308690 AGTAGTGAGGGCGAATCCTAC 58.691 52.381 0.00 0.00 37.25 3.18
2622 3259 2.091775 AGTAGTGAGGGCGAATCCTACT 60.092 50.000 0.00 0.00 37.25 2.57
2623 3260 2.750141 AGTGAGGGCGAATCCTACTA 57.250 50.000 0.00 0.00 37.25 1.82
2624 3261 3.246416 AGTGAGGGCGAATCCTACTAT 57.754 47.619 0.00 0.00 37.25 2.12
2625 3262 2.894126 AGTGAGGGCGAATCCTACTATG 59.106 50.000 0.00 0.00 37.25 2.23
2626 3263 2.891580 GTGAGGGCGAATCCTACTATGA 59.108 50.000 0.00 0.00 37.25 2.15
2627 3264 2.891580 TGAGGGCGAATCCTACTATGAC 59.108 50.000 0.00 0.00 37.25 3.06
2628 3265 3.158676 GAGGGCGAATCCTACTATGACT 58.841 50.000 0.00 0.00 37.25 3.41
2629 3266 2.894126 AGGGCGAATCCTACTATGACTG 59.106 50.000 0.00 0.00 34.92 3.51
2630 3267 2.028930 GGGCGAATCCTACTATGACTGG 60.029 54.545 0.00 0.00 34.39 4.00
2631 3268 2.628657 GGCGAATCCTACTATGACTGGT 59.371 50.000 0.00 0.00 0.00 4.00
2632 3269 3.825014 GGCGAATCCTACTATGACTGGTA 59.175 47.826 0.00 0.00 0.00 3.25
2633 3270 4.082679 GGCGAATCCTACTATGACTGGTAG 60.083 50.000 0.00 0.00 36.49 3.18
2634 3271 4.519730 GCGAATCCTACTATGACTGGTAGT 59.480 45.833 0.00 0.00 35.32 2.73
2635 3272 5.335035 GCGAATCCTACTATGACTGGTAGTC 60.335 48.000 2.11 2.11 45.26 2.59
2636 3273 5.181622 CGAATCCTACTATGACTGGTAGTCC 59.818 48.000 6.52 0.00 44.44 3.85
2637 3274 5.933846 ATCCTACTATGACTGGTAGTCCT 57.066 43.478 6.52 0.00 44.44 3.85
2638 3275 7.403837 AATCCTACTATGACTGGTAGTCCTA 57.596 40.000 6.52 1.04 44.44 2.94
2639 3276 6.436738 TCCTACTATGACTGGTAGTCCTAG 57.563 45.833 15.29 15.29 44.44 3.02
2644 3281 6.436738 CTATGACTGGTAGTCCTAGTAGGA 57.563 45.833 15.33 15.33 44.44 2.94
2652 3289 3.796973 TCCTAGTAGGACTCCCCCT 57.203 57.895 15.33 0.00 40.06 4.79
2653 3290 1.532038 TCCTAGTAGGACTCCCCCTC 58.468 60.000 15.33 0.00 40.06 4.30
2654 3291 0.483770 CCTAGTAGGACTCCCCCTCC 59.516 65.000 11.09 0.00 37.67 4.30
2655 3292 1.536644 CTAGTAGGACTCCCCCTCCT 58.463 60.000 0.00 0.00 41.36 3.69
2656 3293 1.860906 CTAGTAGGACTCCCCCTCCTT 59.139 57.143 0.00 0.00 39.09 3.36
2657 3294 1.102938 AGTAGGACTCCCCCTCCTTT 58.897 55.000 0.00 0.00 39.09 3.11
2658 3295 1.205055 GTAGGACTCCCCCTCCTTTG 58.795 60.000 0.00 0.00 39.09 2.77
2659 3296 0.620700 TAGGACTCCCCCTCCTTTGC 60.621 60.000 0.00 0.00 39.09 3.68
2660 3297 2.269241 GACTCCCCCTCCTTTGCG 59.731 66.667 0.00 0.00 0.00 4.85
2661 3298 2.529389 ACTCCCCCTCCTTTGCGT 60.529 61.111 0.00 0.00 0.00 5.24
2662 3299 2.045926 CTCCCCCTCCTTTGCGTG 60.046 66.667 0.00 0.00 0.00 5.34
2663 3300 4.344865 TCCCCCTCCTTTGCGTGC 62.345 66.667 0.00 0.00 0.00 5.34
2667 3304 4.351054 CCTCCTTTGCGTGCCCCT 62.351 66.667 0.00 0.00 0.00 4.79
2668 3305 2.282462 CTCCTTTGCGTGCCCCTT 60.282 61.111 0.00 0.00 0.00 3.95
2669 3306 2.597217 TCCTTTGCGTGCCCCTTG 60.597 61.111 0.00 0.00 0.00 3.61
2670 3307 2.912025 CCTTTGCGTGCCCCTTGT 60.912 61.111 0.00 0.00 0.00 3.16
2671 3308 2.336088 CTTTGCGTGCCCCTTGTG 59.664 61.111 0.00 0.00 0.00 3.33
2672 3309 3.211564 CTTTGCGTGCCCCTTGTGG 62.212 63.158 0.00 0.00 0.00 4.17
2680 3317 4.748144 CCCCTTGTGGCCAGCCTC 62.748 72.222 5.11 7.03 36.94 4.70
2681 3318 4.748144 CCCTTGTGGCCAGCCTCC 62.748 72.222 5.11 0.00 36.94 4.30
2682 3319 3.655211 CCTTGTGGCCAGCCTCCT 61.655 66.667 5.11 0.00 36.94 3.69
2683 3320 2.045536 CTTGTGGCCAGCCTCCTC 60.046 66.667 5.11 0.00 36.94 3.71
2684 3321 3.635268 CTTGTGGCCAGCCTCCTCC 62.635 68.421 5.11 0.00 36.94 4.30
2690 3327 4.101077 CCAGCCTCCTCCCCTCCT 62.101 72.222 0.00 0.00 0.00 3.69
2691 3328 2.445654 CAGCCTCCTCCCCTCCTC 60.446 72.222 0.00 0.00 0.00 3.71
2692 3329 3.773154 AGCCTCCTCCCCTCCTCC 61.773 72.222 0.00 0.00 0.00 4.30
2693 3330 3.773154 GCCTCCTCCCCTCCTCCT 61.773 72.222 0.00 0.00 0.00 3.69
2694 3331 3.124088 CCTCCTCCCCTCCTCCTT 58.876 66.667 0.00 0.00 0.00 3.36
2695 3332 1.398234 CCTCCTCCCCTCCTCCTTT 59.602 63.158 0.00 0.00 0.00 3.11
2696 3333 0.642710 CCTCCTCCCCTCCTCCTTTA 59.357 60.000 0.00 0.00 0.00 1.85
2697 3334 1.224381 CCTCCTCCCCTCCTCCTTTAT 59.776 57.143 0.00 0.00 0.00 1.40
2698 3335 2.455163 CCTCCTCCCCTCCTCCTTTATA 59.545 54.545 0.00 0.00 0.00 0.98
2699 3336 3.079843 CCTCCTCCCCTCCTCCTTTATAT 59.920 52.174 0.00 0.00 0.00 0.86
2700 3337 4.297935 CCTCCTCCCCTCCTCCTTTATATA 59.702 50.000 0.00 0.00 0.00 0.86
2701 3338 5.042218 CCTCCTCCCCTCCTCCTTTATATAT 60.042 48.000 0.00 0.00 0.00 0.86
2702 3339 5.854843 TCCTCCCCTCCTCCTTTATATATG 58.145 45.833 0.00 0.00 0.00 1.78
2703 3340 4.971924 CCTCCCCTCCTCCTTTATATATGG 59.028 50.000 0.00 0.00 0.00 2.74
2704 3341 4.971924 CTCCCCTCCTCCTTTATATATGGG 59.028 50.000 0.00 0.00 0.00 4.00
2705 3342 4.047883 CCCCTCCTCCTTTATATATGGGG 58.952 52.174 0.00 0.00 44.69 4.96
2706 3343 4.047883 CCCTCCTCCTTTATATATGGGGG 58.952 52.174 12.68 12.68 42.08 5.40
2707 3344 3.459969 CCTCCTCCTTTATATATGGGGGC 59.540 52.174 13.64 0.00 40.78 5.80
2708 3345 4.111577 CTCCTCCTTTATATATGGGGGCA 58.888 47.826 13.64 5.37 40.78 5.36
2709 3346 4.111577 TCCTCCTTTATATATGGGGGCAG 58.888 47.826 13.64 1.23 40.78 4.85
2710 3347 3.203040 CCTCCTTTATATATGGGGGCAGG 59.797 52.174 7.92 2.43 35.07 4.85
2711 3348 3.197983 TCCTTTATATATGGGGGCAGGG 58.802 50.000 0.00 0.00 0.00 4.45
2712 3349 2.244769 CCTTTATATATGGGGGCAGGGG 59.755 54.545 0.00 0.00 0.00 4.79
2713 3350 1.994399 TTATATATGGGGGCAGGGGG 58.006 55.000 0.00 0.00 0.00 5.40
2714 3351 0.626277 TATATATGGGGGCAGGGGGC 60.626 60.000 0.00 0.00 43.74 5.80
2729 3366 3.070576 GGCACCCCAAGGCACATC 61.071 66.667 0.00 0.00 36.11 3.06
2730 3367 2.283101 GCACCCCAAGGCACATCA 60.283 61.111 0.00 0.00 36.11 3.07
2731 3368 1.907807 GCACCCCAAGGCACATCAA 60.908 57.895 0.00 0.00 36.11 2.57
2732 3369 1.259840 GCACCCCAAGGCACATCAAT 61.260 55.000 0.00 0.00 36.11 2.57
2733 3370 1.269012 CACCCCAAGGCACATCAATT 58.731 50.000 0.00 0.00 36.11 2.32
2734 3371 1.066716 CACCCCAAGGCACATCAATTG 60.067 52.381 0.00 0.00 36.11 2.32
2735 3372 1.269012 CCCCAAGGCACATCAATTGT 58.731 50.000 5.13 0.00 39.91 2.71
2736 3373 1.205417 CCCCAAGGCACATCAATTGTC 59.795 52.381 5.13 0.00 36.00 3.18
2737 3374 2.173519 CCCAAGGCACATCAATTGTCT 58.826 47.619 5.13 0.00 36.00 3.41
2738 3375 2.564062 CCCAAGGCACATCAATTGTCTT 59.436 45.455 5.13 0.00 36.00 3.01
2739 3376 3.763360 CCCAAGGCACATCAATTGTCTTA 59.237 43.478 5.13 0.00 36.00 2.10
2740 3377 4.142315 CCCAAGGCACATCAATTGTCTTAG 60.142 45.833 5.13 0.00 36.00 2.18
2741 3378 4.418392 CAAGGCACATCAATTGTCTTAGC 58.582 43.478 5.13 4.92 36.00 3.09
2742 3379 3.019564 AGGCACATCAATTGTCTTAGCC 58.980 45.455 17.57 17.57 41.66 3.93
2743 3380 2.223340 GGCACATCAATTGTCTTAGCCG 60.223 50.000 5.13 0.00 34.94 5.52
2744 3381 2.420022 GCACATCAATTGTCTTAGCCGT 59.580 45.455 5.13 0.00 36.00 5.68
2745 3382 3.728864 GCACATCAATTGTCTTAGCCGTG 60.729 47.826 5.13 4.18 36.00 4.94
2746 3383 3.436704 CACATCAATTGTCTTAGCCGTGT 59.563 43.478 5.13 0.00 36.00 4.49
2747 3384 3.436704 ACATCAATTGTCTTAGCCGTGTG 59.563 43.478 5.13 0.00 30.89 3.82
2748 3385 1.804151 TCAATTGTCTTAGCCGTGTGC 59.196 47.619 5.13 0.00 41.71 4.57
2767 3404 3.637273 GTGCCCCTCTCCACCGTT 61.637 66.667 0.00 0.00 0.00 4.44
2768 3405 2.852075 TGCCCCTCTCCACCGTTT 60.852 61.111 0.00 0.00 0.00 3.60
2769 3406 1.536907 TGCCCCTCTCCACCGTTTA 60.537 57.895 0.00 0.00 0.00 2.01
2770 3407 1.078637 GCCCCTCTCCACCGTTTAC 60.079 63.158 0.00 0.00 0.00 2.01
2771 3408 1.551019 GCCCCTCTCCACCGTTTACT 61.551 60.000 0.00 0.00 0.00 2.24
2772 3409 0.535797 CCCCTCTCCACCGTTTACTC 59.464 60.000 0.00 0.00 0.00 2.59
2773 3410 0.535797 CCCTCTCCACCGTTTACTCC 59.464 60.000 0.00 0.00 0.00 3.85
2774 3411 1.558233 CCTCTCCACCGTTTACTCCT 58.442 55.000 0.00 0.00 0.00 3.69
2775 3412 1.477295 CCTCTCCACCGTTTACTCCTC 59.523 57.143 0.00 0.00 0.00 3.71
2776 3413 1.477295 CTCTCCACCGTTTACTCCTCC 59.523 57.143 0.00 0.00 0.00 4.30
2777 3414 1.203087 TCTCCACCGTTTACTCCTCCA 60.203 52.381 0.00 0.00 0.00 3.86
2778 3415 1.621814 CTCCACCGTTTACTCCTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
2779 3416 2.236395 CTCCACCGTTTACTCCTCCAAT 59.764 50.000 0.00 0.00 0.00 3.16
2780 3417 2.235402 TCCACCGTTTACTCCTCCAATC 59.765 50.000 0.00 0.00 0.00 2.67
2781 3418 2.027561 CCACCGTTTACTCCTCCAATCA 60.028 50.000 0.00 0.00 0.00 2.57
2782 3419 3.370527 CCACCGTTTACTCCTCCAATCAT 60.371 47.826 0.00 0.00 0.00 2.45
2783 3420 4.141801 CCACCGTTTACTCCTCCAATCATA 60.142 45.833 0.00 0.00 0.00 2.15
2784 3421 5.454755 CCACCGTTTACTCCTCCAATCATAT 60.455 44.000 0.00 0.00 0.00 1.78
2785 3422 6.055588 CACCGTTTACTCCTCCAATCATATT 58.944 40.000 0.00 0.00 0.00 1.28
2786 3423 6.017934 CACCGTTTACTCCTCCAATCATATTG 60.018 42.308 0.00 0.00 0.00 1.90
2787 3424 6.055588 CCGTTTACTCCTCCAATCATATTGT 58.944 40.000 0.00 0.00 0.00 2.71
2788 3425 6.202954 CCGTTTACTCCTCCAATCATATTGTC 59.797 42.308 0.00 0.00 0.00 3.18
2789 3426 6.074302 CGTTTACTCCTCCAATCATATTGTCG 60.074 42.308 0.00 0.00 0.00 4.35
2790 3427 6.479972 TTACTCCTCCAATCATATTGTCGT 57.520 37.500 0.00 0.00 0.00 4.34
2791 3428 7.591421 TTACTCCTCCAATCATATTGTCGTA 57.409 36.000 0.00 0.00 0.00 3.43
2792 3429 6.090483 ACTCCTCCAATCATATTGTCGTAG 57.910 41.667 0.00 0.00 0.00 3.51
2793 3430 5.598830 ACTCCTCCAATCATATTGTCGTAGT 59.401 40.000 0.00 0.00 0.00 2.73
2794 3431 5.842907 TCCTCCAATCATATTGTCGTAGTG 58.157 41.667 0.00 0.00 0.00 2.74
2795 3432 4.449068 CCTCCAATCATATTGTCGTAGTGC 59.551 45.833 0.00 0.00 0.00 4.40
2796 3433 5.276461 TCCAATCATATTGTCGTAGTGCT 57.724 39.130 0.00 0.00 0.00 4.40
2797 3434 5.670485 TCCAATCATATTGTCGTAGTGCTT 58.330 37.500 0.00 0.00 0.00 3.91
2798 3435 6.811954 TCCAATCATATTGTCGTAGTGCTTA 58.188 36.000 0.00 0.00 0.00 3.09
2799 3436 6.923508 TCCAATCATATTGTCGTAGTGCTTAG 59.076 38.462 0.00 0.00 0.00 2.18
2800 3437 6.146184 CCAATCATATTGTCGTAGTGCTTAGG 59.854 42.308 0.00 0.00 0.00 2.69
2801 3438 4.617959 TCATATTGTCGTAGTGCTTAGGC 58.382 43.478 0.00 0.00 39.26 3.93
2802 3439 1.922570 ATTGTCGTAGTGCTTAGGCG 58.077 50.000 0.00 0.00 42.25 5.52
2803 3440 0.883153 TTGTCGTAGTGCTTAGGCGA 59.117 50.000 0.00 0.00 42.25 5.54
2804 3441 0.883153 TGTCGTAGTGCTTAGGCGAA 59.117 50.000 0.00 0.00 42.25 4.70
2805 3442 1.135489 TGTCGTAGTGCTTAGGCGAAG 60.135 52.381 2.68 2.68 42.25 3.79
2818 3455 2.892425 CGAAGCCCTGCACGGATC 60.892 66.667 5.85 2.39 33.16 3.36
2819 3456 2.268920 GAAGCCCTGCACGGATCA 59.731 61.111 5.85 0.00 33.16 2.92
2820 3457 2.045926 AAGCCCTGCACGGATCAC 60.046 61.111 5.85 0.00 33.16 3.06
2821 3458 2.527951 GAAGCCCTGCACGGATCACT 62.528 60.000 5.85 0.00 33.16 3.41
2822 3459 2.045926 GCCCTGCACGGATCACTT 60.046 61.111 5.85 0.00 33.16 3.16
2823 3460 2.109126 GCCCTGCACGGATCACTTC 61.109 63.158 5.85 0.00 33.16 3.01
2824 3461 1.296392 CCCTGCACGGATCACTTCA 59.704 57.895 0.00 0.00 33.16 3.02
2825 3462 1.021390 CCCTGCACGGATCACTTCAC 61.021 60.000 0.00 0.00 33.16 3.18
2826 3463 1.021390 CCTGCACGGATCACTTCACC 61.021 60.000 0.00 0.00 33.16 4.02
2827 3464 0.320683 CTGCACGGATCACTTCACCA 60.321 55.000 0.00 0.00 0.00 4.17
2828 3465 0.107643 TGCACGGATCACTTCACCAA 59.892 50.000 0.00 0.00 0.00 3.67
2829 3466 0.517316 GCACGGATCACTTCACCAAC 59.483 55.000 0.00 0.00 0.00 3.77
2830 3467 1.877637 CACGGATCACTTCACCAACA 58.122 50.000 0.00 0.00 0.00 3.33
2831 3468 1.531149 CACGGATCACTTCACCAACAC 59.469 52.381 0.00 0.00 0.00 3.32
2832 3469 1.156736 CGGATCACTTCACCAACACC 58.843 55.000 0.00 0.00 0.00 4.16
2833 3470 1.156736 GGATCACTTCACCAACACCG 58.843 55.000 0.00 0.00 0.00 4.94
2834 3471 1.542547 GGATCACTTCACCAACACCGT 60.543 52.381 0.00 0.00 0.00 4.83
2835 3472 1.798813 GATCACTTCACCAACACCGTC 59.201 52.381 0.00 0.00 0.00 4.79
2836 3473 0.537653 TCACTTCACCAACACCGTCA 59.462 50.000 0.00 0.00 0.00 4.35
2837 3474 1.140052 TCACTTCACCAACACCGTCAT 59.860 47.619 0.00 0.00 0.00 3.06
2838 3475 1.531149 CACTTCACCAACACCGTCATC 59.469 52.381 0.00 0.00 0.00 2.92
2839 3476 1.140052 ACTTCACCAACACCGTCATCA 59.860 47.619 0.00 0.00 0.00 3.07
2840 3477 1.531149 CTTCACCAACACCGTCATCAC 59.469 52.381 0.00 0.00 0.00 3.06
2841 3478 0.598942 TCACCAACACCGTCATCACG 60.599 55.000 0.00 0.00 46.29 4.35
2842 3479 1.959226 ACCAACACCGTCATCACGC 60.959 57.895 0.00 0.00 45.29 5.34
2843 3480 2.677003 CCAACACCGTCATCACGCC 61.677 63.158 0.00 0.00 45.29 5.68
2844 3481 1.958715 CAACACCGTCATCACGCCA 60.959 57.895 0.00 0.00 45.29 5.69
2845 3482 1.003839 AACACCGTCATCACGCCAT 60.004 52.632 0.00 0.00 45.29 4.40
2846 3483 1.019278 AACACCGTCATCACGCCATC 61.019 55.000 0.00 0.00 45.29 3.51
2847 3484 2.202743 ACCGTCATCACGCCATCG 60.203 61.111 0.00 0.00 45.29 3.84
2865 3502 0.914551 CGTGCTAACGGAACTCATCG 59.085 55.000 0.00 0.00 46.25 3.84
2866 3503 1.466866 CGTGCTAACGGAACTCATCGA 60.467 52.381 0.00 0.00 46.25 3.59
2867 3504 1.918609 GTGCTAACGGAACTCATCGAC 59.081 52.381 0.00 0.00 0.00 4.20
2868 3505 1.816835 TGCTAACGGAACTCATCGACT 59.183 47.619 0.00 0.00 0.00 4.18
2869 3506 2.159421 TGCTAACGGAACTCATCGACTC 60.159 50.000 0.00 0.00 0.00 3.36
2870 3507 2.159421 GCTAACGGAACTCATCGACTCA 60.159 50.000 0.00 0.00 0.00 3.41
2871 3508 3.489398 GCTAACGGAACTCATCGACTCAT 60.489 47.826 0.00 0.00 0.00 2.90
2872 3509 3.594603 AACGGAACTCATCGACTCATT 57.405 42.857 0.00 0.00 0.00 2.57
2873 3510 3.152261 ACGGAACTCATCGACTCATTC 57.848 47.619 0.00 0.00 0.00 2.67
2874 3511 2.492088 ACGGAACTCATCGACTCATTCA 59.508 45.455 0.00 0.00 0.00 2.57
2875 3512 3.131223 ACGGAACTCATCGACTCATTCAT 59.869 43.478 0.00 0.00 0.00 2.57
2876 3513 3.488678 CGGAACTCATCGACTCATTCATG 59.511 47.826 0.00 0.00 0.00 3.07
2877 3514 3.247173 GGAACTCATCGACTCATTCATGC 59.753 47.826 0.00 0.00 0.00 4.06
2878 3515 2.831333 ACTCATCGACTCATTCATGCC 58.169 47.619 0.00 0.00 0.00 4.40
2879 3516 2.433604 ACTCATCGACTCATTCATGCCT 59.566 45.455 0.00 0.00 0.00 4.75
2880 3517 3.058450 CTCATCGACTCATTCATGCCTC 58.942 50.000 0.00 0.00 0.00 4.70
2881 3518 2.697229 TCATCGACTCATTCATGCCTCT 59.303 45.455 0.00 0.00 0.00 3.69
2882 3519 3.891366 TCATCGACTCATTCATGCCTCTA 59.109 43.478 0.00 0.00 0.00 2.43
2883 3520 3.717400 TCGACTCATTCATGCCTCTAC 57.283 47.619 0.00 0.00 0.00 2.59
2884 3521 3.291584 TCGACTCATTCATGCCTCTACT 58.708 45.455 0.00 0.00 0.00 2.57
2885 3522 3.067320 TCGACTCATTCATGCCTCTACTG 59.933 47.826 0.00 0.00 0.00 2.74
2886 3523 3.726607 GACTCATTCATGCCTCTACTGG 58.273 50.000 0.00 0.00 0.00 4.00
2887 3524 3.378512 ACTCATTCATGCCTCTACTGGA 58.621 45.455 0.00 0.00 0.00 3.86
2888 3525 3.972638 ACTCATTCATGCCTCTACTGGAT 59.027 43.478 0.00 0.00 0.00 3.41
2889 3526 4.040217 ACTCATTCATGCCTCTACTGGATC 59.960 45.833 0.00 0.00 0.00 3.36
2890 3527 3.969312 TCATTCATGCCTCTACTGGATCA 59.031 43.478 0.00 0.00 0.00 2.92
2891 3528 4.409901 TCATTCATGCCTCTACTGGATCAA 59.590 41.667 0.00 0.00 0.00 2.57
2892 3529 4.412796 TTCATGCCTCTACTGGATCAAG 57.587 45.455 0.00 0.00 0.00 3.02
2893 3530 3.646534 TCATGCCTCTACTGGATCAAGA 58.353 45.455 3.42 0.00 0.00 3.02
2894 3531 3.640498 TCATGCCTCTACTGGATCAAGAG 59.360 47.826 3.42 5.48 37.17 2.85
2895 3532 3.107402 TGCCTCTACTGGATCAAGAGT 57.893 47.619 3.42 0.18 35.93 3.24
2896 3533 3.445008 TGCCTCTACTGGATCAAGAGTT 58.555 45.455 3.42 0.00 35.93 3.01
2897 3534 3.449018 TGCCTCTACTGGATCAAGAGTTC 59.551 47.826 3.42 1.39 35.93 3.01
2898 3535 3.490078 GCCTCTACTGGATCAAGAGTTCG 60.490 52.174 3.42 0.00 35.93 3.95
2899 3536 3.948473 CCTCTACTGGATCAAGAGTTCGA 59.052 47.826 3.42 0.00 35.93 3.71
2900 3537 4.036262 CCTCTACTGGATCAAGAGTTCGAG 59.964 50.000 3.42 7.26 35.93 4.04
2901 3538 3.948473 TCTACTGGATCAAGAGTTCGAGG 59.052 47.826 3.42 0.00 0.00 4.63
2902 3539 1.827969 ACTGGATCAAGAGTTCGAGGG 59.172 52.381 3.42 0.00 0.00 4.30
2903 3540 2.103373 CTGGATCAAGAGTTCGAGGGA 58.897 52.381 0.00 0.00 0.00 4.20
2904 3541 2.697751 CTGGATCAAGAGTTCGAGGGAT 59.302 50.000 0.00 0.00 0.00 3.85
2905 3542 2.432146 TGGATCAAGAGTTCGAGGGATG 59.568 50.000 0.00 0.00 0.00 3.51
2906 3543 2.432510 GGATCAAGAGTTCGAGGGATGT 59.567 50.000 0.00 0.00 0.00 3.06
2907 3544 3.491792 GGATCAAGAGTTCGAGGGATGTC 60.492 52.174 0.00 0.00 0.00 3.06
2908 3545 2.525368 TCAAGAGTTCGAGGGATGTCA 58.475 47.619 0.00 0.00 0.00 3.58
2909 3546 3.099905 TCAAGAGTTCGAGGGATGTCAT 58.900 45.455 0.00 0.00 0.00 3.06
2910 3547 3.131223 TCAAGAGTTCGAGGGATGTCATC 59.869 47.826 4.06 4.06 0.00 2.92
2911 3548 1.678627 AGAGTTCGAGGGATGTCATCG 59.321 52.381 6.74 0.00 37.79 3.84
2912 3549 1.676529 GAGTTCGAGGGATGTCATCGA 59.323 52.381 6.74 0.00 43.19 3.59
2913 3550 1.678627 AGTTCGAGGGATGTCATCGAG 59.321 52.381 6.74 0.00 45.23 4.04
2914 3551 0.385751 TTCGAGGGATGTCATCGAGC 59.614 55.000 6.74 0.00 45.23 5.03
2915 3552 0.466372 TCGAGGGATGTCATCGAGCT 60.466 55.000 6.74 0.00 40.29 4.09
2916 3553 0.318529 CGAGGGATGTCATCGAGCTG 60.319 60.000 6.74 0.00 38.72 4.24
2917 3554 1.035923 GAGGGATGTCATCGAGCTGA 58.964 55.000 6.74 0.00 0.00 4.26
2918 3555 1.410517 GAGGGATGTCATCGAGCTGAA 59.589 52.381 6.74 0.00 0.00 3.02
2919 3556 1.137872 AGGGATGTCATCGAGCTGAAC 59.862 52.381 6.74 0.00 0.00 3.18
2920 3557 1.203928 GGATGTCATCGAGCTGAACG 58.796 55.000 6.74 0.00 0.00 3.95
2921 3558 1.469940 GGATGTCATCGAGCTGAACGT 60.470 52.381 6.74 0.00 0.00 3.99
2922 3559 1.585668 GATGTCATCGAGCTGAACGTG 59.414 52.381 0.00 0.00 0.00 4.49
2923 3560 0.313987 TGTCATCGAGCTGAACGTGT 59.686 50.000 0.00 0.00 0.00 4.49
2924 3561 0.710567 GTCATCGAGCTGAACGTGTG 59.289 55.000 0.00 0.00 0.00 3.82
2925 3562 1.008875 TCATCGAGCTGAACGTGTGC 61.009 55.000 0.00 0.00 0.00 4.57
2926 3563 1.006220 ATCGAGCTGAACGTGTGCA 60.006 52.632 0.00 0.00 0.00 4.57
2927 3564 1.010935 ATCGAGCTGAACGTGTGCAG 61.011 55.000 3.48 3.48 35.28 4.41
2928 3565 1.661509 CGAGCTGAACGTGTGCAGA 60.662 57.895 12.25 0.00 34.06 4.26
2929 3566 1.215014 CGAGCTGAACGTGTGCAGAA 61.215 55.000 12.25 0.00 34.06 3.02
2930 3567 0.233332 GAGCTGAACGTGTGCAGAAC 59.767 55.000 12.25 1.20 34.06 3.01
2931 3568 0.179073 AGCTGAACGTGTGCAGAACT 60.179 50.000 12.25 0.00 34.06 3.01
2932 3569 0.233332 GCTGAACGTGTGCAGAACTC 59.767 55.000 12.25 0.00 34.06 3.01
2936 3573 3.848142 CGTGTGCAGAACTCGGAG 58.152 61.111 2.83 2.83 41.05 4.63
2937 3574 1.734477 CGTGTGCAGAACTCGGAGG 60.734 63.158 10.23 0.00 41.05 4.30
2938 3575 1.367840 GTGTGCAGAACTCGGAGGT 59.632 57.895 10.23 1.51 0.00 3.85
2939 3576 0.946221 GTGTGCAGAACTCGGAGGTG 60.946 60.000 10.23 5.07 0.00 4.00
2940 3577 2.029844 GTGCAGAACTCGGAGGTGC 61.030 63.158 17.45 17.45 34.62 5.01
2941 3578 2.435059 GCAGAACTCGGAGGTGCC 60.435 66.667 10.23 0.00 0.00 5.01
2950 3587 2.505557 GGAGGTGCCGTACGTTCG 60.506 66.667 15.21 7.68 0.00 3.95
2962 3599 2.444351 GTACGTTCGGTACTTGATCGG 58.556 52.381 17.26 0.00 46.50 4.18
2963 3600 0.883833 ACGTTCGGTACTTGATCGGT 59.116 50.000 17.26 0.00 33.92 4.69
2964 3601 1.270550 ACGTTCGGTACTTGATCGGTT 59.729 47.619 17.26 2.38 33.92 4.44
2965 3602 1.652124 CGTTCGGTACTTGATCGGTTG 59.348 52.381 9.70 0.00 30.29 3.77
2966 3603 2.669113 CGTTCGGTACTTGATCGGTTGA 60.669 50.000 9.70 0.00 30.29 3.18
2967 3604 3.518590 GTTCGGTACTTGATCGGTTGAT 58.481 45.455 0.00 0.00 37.60 2.57
2968 3605 3.880047 TCGGTACTTGATCGGTTGATT 57.120 42.857 0.00 0.00 34.09 2.57
2969 3606 4.196626 TCGGTACTTGATCGGTTGATTT 57.803 40.909 0.00 0.00 34.09 2.17
2970 3607 4.178540 TCGGTACTTGATCGGTTGATTTC 58.821 43.478 0.00 0.00 34.09 2.17
2971 3608 3.930229 CGGTACTTGATCGGTTGATTTCA 59.070 43.478 0.00 0.00 34.09 2.69
2972 3609 4.032900 CGGTACTTGATCGGTTGATTTCAG 59.967 45.833 0.00 0.00 34.09 3.02
2973 3610 5.175859 GGTACTTGATCGGTTGATTTCAGA 58.824 41.667 0.00 0.00 34.09 3.27
2974 3611 5.642063 GGTACTTGATCGGTTGATTTCAGAA 59.358 40.000 0.00 0.00 34.09 3.02
2975 3612 5.869753 ACTTGATCGGTTGATTTCAGAAG 57.130 39.130 0.00 0.00 34.09 2.85
2976 3613 5.551233 ACTTGATCGGTTGATTTCAGAAGA 58.449 37.500 0.00 0.00 34.09 2.87
2977 3614 5.409826 ACTTGATCGGTTGATTTCAGAAGAC 59.590 40.000 0.00 0.00 34.09 3.01
2978 3615 3.926527 TGATCGGTTGATTTCAGAAGACG 59.073 43.478 0.00 0.00 34.09 4.18
2979 3616 3.380479 TCGGTTGATTTCAGAAGACGT 57.620 42.857 0.00 0.00 0.00 4.34
2980 3617 3.724374 TCGGTTGATTTCAGAAGACGTT 58.276 40.909 0.00 0.00 0.00 3.99
2981 3618 4.124238 TCGGTTGATTTCAGAAGACGTTT 58.876 39.130 0.00 0.00 0.00 3.60
2982 3619 4.025229 TCGGTTGATTTCAGAAGACGTTTG 60.025 41.667 0.00 0.00 0.00 2.93
2983 3620 4.025229 CGGTTGATTTCAGAAGACGTTTGA 60.025 41.667 0.00 0.00 0.00 2.69
2984 3621 5.205565 GGTTGATTTCAGAAGACGTTTGAC 58.794 41.667 0.00 0.00 0.00 3.18
2985 3622 5.007724 GGTTGATTTCAGAAGACGTTTGACT 59.992 40.000 0.00 0.00 0.00 3.41
2986 3623 6.202188 GGTTGATTTCAGAAGACGTTTGACTA 59.798 38.462 0.00 0.00 0.00 2.59
2987 3624 6.764877 TGATTTCAGAAGACGTTTGACTAC 57.235 37.500 0.00 0.00 0.00 2.73
2988 3625 6.277605 TGATTTCAGAAGACGTTTGACTACA 58.722 36.000 0.00 0.00 0.00 2.74
2989 3626 6.929049 TGATTTCAGAAGACGTTTGACTACAT 59.071 34.615 0.00 0.00 0.00 2.29
2990 3627 6.764877 TTTCAGAAGACGTTTGACTACATC 57.235 37.500 0.00 0.00 0.00 3.06
2991 3628 5.447624 TCAGAAGACGTTTGACTACATCA 57.552 39.130 0.00 0.00 34.65 3.07
2992 3629 5.838529 TCAGAAGACGTTTGACTACATCAA 58.161 37.500 0.00 0.00 45.92 2.57
3003 3640 5.818678 TGACTACATCAACCACCTTAAGT 57.181 39.130 0.97 0.00 33.02 2.24
3004 3641 6.182507 TGACTACATCAACCACCTTAAGTT 57.817 37.500 0.97 0.00 33.02 2.66
3005 3642 7.305813 TGACTACATCAACCACCTTAAGTTA 57.694 36.000 0.97 0.00 33.02 2.24
3006 3643 7.737869 TGACTACATCAACCACCTTAAGTTAA 58.262 34.615 0.97 0.00 33.02 2.01
3007 3644 7.658575 TGACTACATCAACCACCTTAAGTTAAC 59.341 37.037 0.97 0.00 33.02 2.01
3008 3645 7.742767 ACTACATCAACCACCTTAAGTTAACT 58.257 34.615 1.12 1.12 0.00 2.24
3009 3646 7.876582 ACTACATCAACCACCTTAAGTTAACTC 59.123 37.037 8.95 0.00 0.00 3.01
3010 3647 6.838382 ACATCAACCACCTTAAGTTAACTCT 58.162 36.000 8.95 2.28 0.00 3.24
3011 3648 7.287810 ACATCAACCACCTTAAGTTAACTCTT 58.712 34.615 8.95 0.00 0.00 2.85
3012 3649 7.778382 ACATCAACCACCTTAAGTTAACTCTTT 59.222 33.333 8.95 0.00 0.00 2.52
3013 3650 7.797038 TCAACCACCTTAAGTTAACTCTTTC 57.203 36.000 8.95 0.00 0.00 2.62
3014 3651 6.480981 TCAACCACCTTAAGTTAACTCTTTCG 59.519 38.462 8.95 0.00 0.00 3.46
3015 3652 4.753610 ACCACCTTAAGTTAACTCTTTCGC 59.246 41.667 8.95 0.00 0.00 4.70
3016 3653 4.995487 CCACCTTAAGTTAACTCTTTCGCT 59.005 41.667 8.95 0.00 0.00 4.93
3017 3654 5.469084 CCACCTTAAGTTAACTCTTTCGCTT 59.531 40.000 8.95 0.00 0.00 4.68
3018 3655 6.017357 CCACCTTAAGTTAACTCTTTCGCTTT 60.017 38.462 8.95 0.00 0.00 3.51
3019 3656 7.070183 CACCTTAAGTTAACTCTTTCGCTTTC 58.930 38.462 8.95 0.00 0.00 2.62
3020 3657 6.073927 ACCTTAAGTTAACTCTTTCGCTTTCG 60.074 38.462 8.95 0.00 0.00 3.46
3021 3658 4.727235 AAGTTAACTCTTTCGCTTTCGG 57.273 40.909 8.95 0.00 36.13 4.30
3022 3659 3.725490 AGTTAACTCTTTCGCTTTCGGT 58.275 40.909 1.12 0.00 36.13 4.69
3023 3660 3.739810 AGTTAACTCTTTCGCTTTCGGTC 59.260 43.478 1.12 0.00 36.13 4.79
3024 3661 2.528041 AACTCTTTCGCTTTCGGTCT 57.472 45.000 0.00 0.00 36.13 3.85
3025 3662 3.655276 AACTCTTTCGCTTTCGGTCTA 57.345 42.857 0.00 0.00 36.13 2.59
3026 3663 3.870633 ACTCTTTCGCTTTCGGTCTAT 57.129 42.857 0.00 0.00 36.13 1.98
3027 3664 3.512680 ACTCTTTCGCTTTCGGTCTATG 58.487 45.455 0.00 0.00 36.13 2.23
3028 3665 3.192844 ACTCTTTCGCTTTCGGTCTATGA 59.807 43.478 0.00 0.00 36.13 2.15
3029 3666 3.770666 TCTTTCGCTTTCGGTCTATGAG 58.229 45.455 0.00 0.00 36.13 2.90
3030 3667 2.579207 TTCGCTTTCGGTCTATGAGG 57.421 50.000 0.00 0.00 36.13 3.86
3031 3668 0.744874 TCGCTTTCGGTCTATGAGGG 59.255 55.000 0.00 0.00 36.13 4.30
3032 3669 0.460311 CGCTTTCGGTCTATGAGGGT 59.540 55.000 0.00 0.00 0.00 4.34
3033 3670 1.679680 CGCTTTCGGTCTATGAGGGTA 59.320 52.381 0.00 0.00 0.00 3.69
3034 3671 2.543238 CGCTTTCGGTCTATGAGGGTAC 60.543 54.545 0.00 0.00 0.00 3.34
3035 3672 2.429610 GCTTTCGGTCTATGAGGGTACA 59.570 50.000 0.00 0.00 0.00 2.90
3036 3673 3.069729 GCTTTCGGTCTATGAGGGTACAT 59.930 47.826 0.00 0.00 0.00 2.29
3037 3674 4.621991 CTTTCGGTCTATGAGGGTACATG 58.378 47.826 0.00 0.00 0.00 3.21
3038 3675 2.594131 TCGGTCTATGAGGGTACATGG 58.406 52.381 0.00 0.00 0.00 3.66
3039 3676 2.176148 TCGGTCTATGAGGGTACATGGA 59.824 50.000 0.00 0.00 35.89 3.41
3043 3680 3.989056 TCTATGAGGGTACATGGACACA 58.011 45.455 14.19 8.61 33.95 3.72
3044 3681 3.704566 TCTATGAGGGTACATGGACACAC 59.295 47.826 14.19 7.00 33.95 3.82
3045 3682 2.024176 TGAGGGTACATGGACACACT 57.976 50.000 14.19 5.94 0.00 3.55
3046 3683 1.899814 TGAGGGTACATGGACACACTC 59.100 52.381 14.19 15.21 44.03 3.51
3047 3684 2.180276 GAGGGTACATGGACACACTCT 58.820 52.381 14.19 0.00 41.18 3.24
3048 3685 2.166664 GAGGGTACATGGACACACTCTC 59.833 54.545 14.19 5.54 41.18 3.20
3049 3686 1.207329 GGGTACATGGACACACTCTCC 59.793 57.143 10.99 0.00 0.00 3.71
3050 3687 1.207329 GGTACATGGACACACTCTCCC 59.793 57.143 10.99 0.00 0.00 4.30
3051 3688 1.207329 GTACATGGACACACTCTCCCC 59.793 57.143 2.19 0.00 0.00 4.81
3052 3689 0.178891 ACATGGACACACTCTCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
3053 3690 0.539051 CATGGACACACTCTCCCCTC 59.461 60.000 0.00 0.00 0.00 4.30
3054 3691 0.415429 ATGGACACACTCTCCCCTCT 59.585 55.000 0.00 0.00 0.00 3.69
3055 3692 0.251832 TGGACACACTCTCCCCTCTC 60.252 60.000 0.00 0.00 0.00 3.20
3056 3693 1.316706 GGACACACTCTCCCCTCTCG 61.317 65.000 0.00 0.00 0.00 4.04
3057 3694 0.609681 GACACACTCTCCCCTCTCGT 60.610 60.000 0.00 0.00 0.00 4.18
3058 3695 0.178958 ACACACTCTCCCCTCTCGTT 60.179 55.000 0.00 0.00 0.00 3.85
3059 3696 0.244994 CACACTCTCCCCTCTCGTTG 59.755 60.000 0.00 0.00 0.00 4.10
3060 3697 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
3061 3698 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
3062 3699 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
3063 3700 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
3064 3701 2.175069 ACTCTCCCCTCTCGTTGCTATA 59.825 50.000 0.00 0.00 0.00 1.31
3065 3702 2.554893 CTCTCCCCTCTCGTTGCTATAC 59.445 54.545 0.00 0.00 0.00 1.47
3066 3703 2.092049 TCTCCCCTCTCGTTGCTATACA 60.092 50.000 0.00 0.00 0.00 2.29
3067 3704 2.894126 CTCCCCTCTCGTTGCTATACAT 59.106 50.000 0.00 0.00 0.00 2.29
3068 3705 2.891580 TCCCCTCTCGTTGCTATACATC 59.108 50.000 0.00 0.00 0.00 3.06
3069 3706 2.894126 CCCCTCTCGTTGCTATACATCT 59.106 50.000 0.00 0.00 0.00 2.90
3070 3707 3.322254 CCCCTCTCGTTGCTATACATCTT 59.678 47.826 0.00 0.00 0.00 2.40
3071 3708 4.551388 CCCTCTCGTTGCTATACATCTTC 58.449 47.826 0.00 0.00 0.00 2.87
3072 3709 4.279671 CCCTCTCGTTGCTATACATCTTCT 59.720 45.833 0.00 0.00 0.00 2.85
3073 3710 5.473846 CCCTCTCGTTGCTATACATCTTCTA 59.526 44.000 0.00 0.00 0.00 2.10
3074 3711 6.348950 CCCTCTCGTTGCTATACATCTTCTAG 60.349 46.154 0.00 0.00 0.00 2.43
3075 3712 6.428465 CCTCTCGTTGCTATACATCTTCTAGA 59.572 42.308 0.00 0.00 0.00 2.43
3076 3713 7.120579 CCTCTCGTTGCTATACATCTTCTAGAT 59.879 40.741 0.00 0.00 34.74 1.98
3077 3714 9.157104 CTCTCGTTGCTATACATCTTCTAGATA 57.843 37.037 0.00 0.00 32.12 1.98
3078 3715 9.157104 TCTCGTTGCTATACATCTTCTAGATAG 57.843 37.037 0.00 0.00 32.12 2.08
3079 3716 9.157104 CTCGTTGCTATACATCTTCTAGATAGA 57.843 37.037 0.00 0.11 32.12 1.98
3080 3717 9.674068 TCGTTGCTATACATCTTCTAGATAGAT 57.326 33.333 10.06 10.06 32.12 1.98
3081 3718 9.929722 CGTTGCTATACATCTTCTAGATAGATC 57.070 37.037 11.99 0.00 32.12 2.75
3085 3722 9.950680 GCTATACATCTTCTAGATAGATCTTGC 57.049 37.037 0.00 0.00 38.32 4.01
3087 3724 6.892658 ACATCTTCTAGATAGATCTTGCGT 57.107 37.500 0.00 6.69 38.32 5.24
3088 3725 6.676950 ACATCTTCTAGATAGATCTTGCGTG 58.323 40.000 0.00 6.33 38.32 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
207 210 9.491406 AGATTAGCCTCTAATGATGATCATACT 57.509 33.333 8.54 0.00 35.76 2.12
429 443 2.550978 CAGGACGAAACTCTGTGTTGT 58.449 47.619 0.00 0.00 39.13 3.32
782 819 6.317391 CCAAAACCACTTTAAATTCAGGCAAA 59.683 34.615 0.00 0.00 0.00 3.68
1044 1082 3.146066 ACAAAGGCGAAGTAAGAATGCA 58.854 40.909 0.00 0.00 0.00 3.96
1071 1109 8.524870 TTAAAATTTCAGAATCAAGAAGCTGC 57.475 30.769 0.00 0.00 0.00 5.25
1227 1267 7.701539 AAATTACTGTGATGTAAGATGCCAA 57.298 32.000 0.00 0.00 36.10 4.52
1717 2340 1.068402 TCCTTGTCGCACGAACGAATA 60.068 47.619 6.14 0.00 44.93 1.75
1848 2477 7.319646 AGTGAAAACTTGTTAATGCTTGTCAA 58.680 30.769 0.00 0.00 0.00 3.18
1858 2487 5.447548 CGTCGGGAAAGTGAAAACTTGTTAA 60.448 40.000 0.00 0.00 0.00 2.01
1920 2549 3.858868 GAAGAGCACGACGCCCACA 62.859 63.158 0.00 0.00 44.04 4.17
2063 2692 2.087248 CTGGTGGACCCCAATCCTT 58.913 57.895 3.62 0.00 39.75 3.36
2112 2741 7.785506 AGTAGCCTAAACATACCACTTCTCTAT 59.214 37.037 0.00 0.00 0.00 1.98
2244 2873 2.498167 GACCATCTTGACACTTGCACT 58.502 47.619 0.00 0.00 0.00 4.40
2290 2919 3.243367 GGATGAAGATGAGAGACACCTCG 60.243 52.174 0.00 0.00 44.08 4.63
2529 3166 7.470900 CGCTACAGCTAAAAGTTAGTAGTAGT 58.529 38.462 18.95 7.42 39.32 2.73
2568 3205 1.421410 CTAGCAGCGCGGGTAAGTTG 61.421 60.000 19.47 5.26 0.00 3.16
2569 3206 1.153628 CTAGCAGCGCGGGTAAGTT 60.154 57.895 19.47 0.01 0.00 2.66
2570 3207 1.033746 TACTAGCAGCGCGGGTAAGT 61.034 55.000 19.47 19.20 0.00 2.24
2571 3208 0.317938 CTACTAGCAGCGCGGGTAAG 60.318 60.000 19.47 15.21 0.00 2.34
2572 3209 1.731700 CTACTAGCAGCGCGGGTAA 59.268 57.895 19.47 6.00 0.00 2.85
2583 3220 4.894705 ACTACTAGGGAAAAGGCTACTAGC 59.105 45.833 0.00 0.00 41.46 3.42
2598 3235 1.614413 GGATTCGCCCTCACTACTAGG 59.386 57.143 0.00 0.00 0.00 3.02
2599 3236 2.588620 AGGATTCGCCCTCACTACTAG 58.411 52.381 0.00 0.00 37.37 2.57
2600 3237 2.750141 AGGATTCGCCCTCACTACTA 57.250 50.000 0.00 0.00 37.37 1.82
2601 3238 2.091775 AGTAGGATTCGCCCTCACTACT 60.092 50.000 0.00 0.00 37.05 2.57
2602 3239 2.308690 AGTAGGATTCGCCCTCACTAC 58.691 52.381 0.00 0.00 37.74 2.73
2603 3240 2.750141 AGTAGGATTCGCCCTCACTA 57.250 50.000 0.00 0.00 37.74 2.74
2604 3241 2.750141 TAGTAGGATTCGCCCTCACT 57.250 50.000 0.00 0.00 37.74 3.41
2605 3242 2.891580 TCATAGTAGGATTCGCCCTCAC 59.108 50.000 0.00 0.00 37.74 3.51
2606 3243 2.891580 GTCATAGTAGGATTCGCCCTCA 59.108 50.000 0.00 0.00 37.74 3.86
2607 3244 3.057174 CAGTCATAGTAGGATTCGCCCTC 60.057 52.174 0.00 0.00 37.74 4.30
2608 3245 2.894126 CAGTCATAGTAGGATTCGCCCT 59.106 50.000 0.00 0.00 40.29 5.19
2609 3246 2.028930 CCAGTCATAGTAGGATTCGCCC 60.029 54.545 0.00 0.00 37.37 6.13
2610 3247 2.628657 ACCAGTCATAGTAGGATTCGCC 59.371 50.000 0.00 0.00 0.00 5.54
2611 3248 4.519730 ACTACCAGTCATAGTAGGATTCGC 59.480 45.833 0.00 0.00 40.25 4.70
2612 3249 5.181622 GGACTACCAGTCATAGTAGGATTCG 59.818 48.000 8.47 0.00 46.79 3.34
2613 3250 6.308566 AGGACTACCAGTCATAGTAGGATTC 58.691 44.000 8.47 0.00 46.79 2.52
2614 3251 6.282568 AGGACTACCAGTCATAGTAGGATT 57.717 41.667 8.47 0.00 46.79 3.01
2615 3252 5.933846 AGGACTACCAGTCATAGTAGGAT 57.066 43.478 8.47 0.00 46.79 3.24
2634 3271 1.532038 GAGGGGGAGTCCTACTAGGA 58.468 60.000 9.58 0.03 43.43 2.94
2635 3272 0.483770 GGAGGGGGAGTCCTACTAGG 59.516 65.000 9.58 0.00 37.25 3.02
2636 3273 1.536644 AGGAGGGGGAGTCCTACTAG 58.463 60.000 9.58 0.00 45.98 2.57
2637 3274 3.796973 AGGAGGGGGAGTCCTACTA 57.203 57.895 9.58 0.00 45.98 1.82
2638 3275 4.654629 AGGAGGGGGAGTCCTACT 57.345 61.111 9.58 7.51 43.05 2.57
2639 3276 1.205055 CAAAGGAGGGGGAGTCCTAC 58.795 60.000 9.58 2.34 44.17 3.18
2640 3277 0.620700 GCAAAGGAGGGGGAGTCCTA 60.621 60.000 9.58 0.00 44.17 2.94
2642 3279 2.677848 GCAAAGGAGGGGGAGTCC 59.322 66.667 0.00 0.00 0.00 3.85
2643 3280 2.269241 CGCAAAGGAGGGGGAGTC 59.731 66.667 0.00 0.00 0.00 3.36
2644 3281 2.529389 ACGCAAAGGAGGGGGAGT 60.529 61.111 0.00 0.00 0.00 3.85
2645 3282 2.045926 CACGCAAAGGAGGGGGAG 60.046 66.667 0.00 0.00 0.00 4.30
2646 3283 4.344865 GCACGCAAAGGAGGGGGA 62.345 66.667 0.00 0.00 0.00 4.81
2650 3287 3.868200 AAGGGGCACGCAAAGGAGG 62.868 63.158 0.00 0.00 46.88 4.30
2651 3288 2.282462 AAGGGGCACGCAAAGGAG 60.282 61.111 0.00 0.00 46.88 3.69
2652 3289 2.597217 CAAGGGGCACGCAAAGGA 60.597 61.111 0.00 0.00 46.88 3.36
2653 3290 2.912025 ACAAGGGGCACGCAAAGG 60.912 61.111 0.00 0.00 46.88 3.11
2654 3291 2.336088 CACAAGGGGCACGCAAAG 59.664 61.111 0.00 0.00 46.88 2.77
2655 3292 3.222855 CCACAAGGGGCACGCAAA 61.223 61.111 0.00 0.00 46.88 3.68
2663 3300 4.748144 GAGGCTGGCCACAAGGGG 62.748 72.222 14.39 0.00 38.92 4.79
2664 3301 4.748144 GGAGGCTGGCCACAAGGG 62.748 72.222 14.39 0.00 38.92 3.95
2665 3302 3.635268 GAGGAGGCTGGCCACAAGG 62.635 68.421 14.39 0.00 38.92 3.61
2666 3303 2.045536 GAGGAGGCTGGCCACAAG 60.046 66.667 14.39 0.00 38.92 3.16
2667 3304 3.650950 GGAGGAGGCTGGCCACAA 61.651 66.667 14.39 0.00 38.92 3.33
2673 3310 4.101077 AGGAGGGGAGGAGGCTGG 62.101 72.222 0.00 0.00 0.00 4.85
2674 3311 2.445654 GAGGAGGGGAGGAGGCTG 60.446 72.222 0.00 0.00 0.00 4.85
2675 3312 3.773154 GGAGGAGGGGAGGAGGCT 61.773 72.222 0.00 0.00 0.00 4.58
2676 3313 2.849071 AAAGGAGGAGGGGAGGAGGC 62.849 65.000 0.00 0.00 0.00 4.70
2677 3314 0.642710 TAAAGGAGGAGGGGAGGAGG 59.357 60.000 0.00 0.00 0.00 4.30
2678 3315 2.805290 ATAAAGGAGGAGGGGAGGAG 57.195 55.000 0.00 0.00 0.00 3.69
2679 3316 5.282832 CCATATATAAAGGAGGAGGGGAGGA 60.283 48.000 0.00 0.00 0.00 3.71
2680 3317 4.971924 CCATATATAAAGGAGGAGGGGAGG 59.028 50.000 0.00 0.00 0.00 4.30
2681 3318 4.971924 CCCATATATAAAGGAGGAGGGGAG 59.028 50.000 6.24 0.00 33.64 4.30
2682 3319 4.972927 CCCATATATAAAGGAGGAGGGGA 58.027 47.826 6.24 0.00 33.64 4.81
2683 3320 4.047883 CCCCATATATAAAGGAGGAGGGG 58.952 52.174 0.00 0.00 46.62 4.79
2684 3321 4.047883 CCCCCATATATAAAGGAGGAGGG 58.952 52.174 6.24 0.00 0.00 4.30
2685 3322 3.459969 GCCCCCATATATAAAGGAGGAGG 59.540 52.174 8.73 4.80 0.00 4.30
2686 3323 4.111577 TGCCCCCATATATAAAGGAGGAG 58.888 47.826 8.73 4.22 0.00 3.69
2687 3324 4.111577 CTGCCCCCATATATAAAGGAGGA 58.888 47.826 8.73 0.00 0.00 3.71
2688 3325 3.203040 CCTGCCCCCATATATAAAGGAGG 59.797 52.174 6.24 4.05 0.00 4.30
2689 3326 3.203040 CCCTGCCCCCATATATAAAGGAG 59.797 52.174 6.24 0.00 0.00 3.69
2690 3327 3.197983 CCCTGCCCCCATATATAAAGGA 58.802 50.000 6.24 0.00 0.00 3.36
2691 3328 2.244769 CCCCTGCCCCCATATATAAAGG 59.755 54.545 0.00 0.00 0.00 3.11
2692 3329 2.244769 CCCCCTGCCCCCATATATAAAG 59.755 54.545 0.00 0.00 0.00 1.85
2693 3330 2.293246 CCCCCTGCCCCCATATATAAA 58.707 52.381 0.00 0.00 0.00 1.40
2694 3331 1.994399 CCCCCTGCCCCCATATATAA 58.006 55.000 0.00 0.00 0.00 0.98
2695 3332 0.626277 GCCCCCTGCCCCCATATATA 60.626 60.000 0.00 0.00 0.00 0.86
2696 3333 1.935931 GCCCCCTGCCCCCATATAT 60.936 63.158 0.00 0.00 0.00 0.86
2697 3334 2.534272 GCCCCCTGCCCCCATATA 60.534 66.667 0.00 0.00 0.00 0.86
2698 3335 4.881381 TGCCCCCTGCCCCCATAT 62.881 66.667 0.00 0.00 40.16 1.78
2711 3348 4.702274 ATGTGCCTTGGGGTGCCC 62.702 66.667 0.00 0.00 45.71 5.36
2712 3349 3.070576 GATGTGCCTTGGGGTGCC 61.071 66.667 0.00 0.00 34.45 5.01
2713 3350 1.259840 ATTGATGTGCCTTGGGGTGC 61.260 55.000 0.00 0.00 34.45 5.01
2714 3351 1.066716 CAATTGATGTGCCTTGGGGTG 60.067 52.381 0.00 0.00 34.45 4.61
2715 3352 1.269012 CAATTGATGTGCCTTGGGGT 58.731 50.000 0.00 0.00 34.45 4.95
2716 3353 1.205417 GACAATTGATGTGCCTTGGGG 59.795 52.381 13.59 0.00 44.12 4.96
2717 3354 2.173519 AGACAATTGATGTGCCTTGGG 58.826 47.619 13.59 0.00 44.12 4.12
2718 3355 3.947910 AAGACAATTGATGTGCCTTGG 57.052 42.857 13.59 0.00 44.12 3.61
2719 3356 4.418392 GCTAAGACAATTGATGTGCCTTG 58.582 43.478 13.59 2.93 44.12 3.61
2720 3357 3.445096 GGCTAAGACAATTGATGTGCCTT 59.555 43.478 13.59 7.60 44.12 4.35
2721 3358 3.019564 GGCTAAGACAATTGATGTGCCT 58.980 45.455 13.59 0.00 44.12 4.75
2722 3359 2.223340 CGGCTAAGACAATTGATGTGCC 60.223 50.000 13.59 16.11 44.12 5.01
2723 3360 2.420022 ACGGCTAAGACAATTGATGTGC 59.580 45.455 13.59 9.19 44.12 4.57
2724 3361 3.436704 ACACGGCTAAGACAATTGATGTG 59.563 43.478 13.59 10.15 44.12 3.21
2725 3362 6.151287 GCACACGGCTAAGACAATTGATGT 62.151 45.833 13.59 0.00 42.17 3.06
2726 3363 3.728864 GCACACGGCTAAGACAATTGATG 60.729 47.826 13.59 0.00 40.25 3.07
2727 3364 2.420022 GCACACGGCTAAGACAATTGAT 59.580 45.455 13.59 0.37 40.25 2.57
2728 3365 1.804151 GCACACGGCTAAGACAATTGA 59.196 47.619 13.59 0.00 40.25 2.57
2729 3366 1.464023 CGCACACGGCTAAGACAATTG 60.464 52.381 3.24 3.24 41.67 2.32
2730 3367 0.796312 CGCACACGGCTAAGACAATT 59.204 50.000 0.00 0.00 41.67 2.32
2731 3368 2.456000 CGCACACGGCTAAGACAAT 58.544 52.632 0.00 0.00 41.67 2.71
2732 3369 3.945436 CGCACACGGCTAAGACAA 58.055 55.556 0.00 0.00 41.67 3.18
2750 3387 1.833787 TAAACGGTGGAGAGGGGCAC 61.834 60.000 0.00 0.00 0.00 5.01
2751 3388 1.536907 TAAACGGTGGAGAGGGGCA 60.537 57.895 0.00 0.00 0.00 5.36
2752 3389 1.078637 GTAAACGGTGGAGAGGGGC 60.079 63.158 0.00 0.00 0.00 5.80
2753 3390 0.535797 GAGTAAACGGTGGAGAGGGG 59.464 60.000 0.00 0.00 0.00 4.79
2754 3391 0.535797 GGAGTAAACGGTGGAGAGGG 59.464 60.000 0.00 0.00 0.00 4.30
2755 3392 1.477295 GAGGAGTAAACGGTGGAGAGG 59.523 57.143 0.00 0.00 0.00 3.69
2756 3393 1.477295 GGAGGAGTAAACGGTGGAGAG 59.523 57.143 0.00 0.00 0.00 3.20
2757 3394 1.203087 TGGAGGAGTAAACGGTGGAGA 60.203 52.381 0.00 0.00 0.00 3.71
2758 3395 1.263356 TGGAGGAGTAAACGGTGGAG 58.737 55.000 0.00 0.00 0.00 3.86
2759 3396 1.719529 TTGGAGGAGTAAACGGTGGA 58.280 50.000 0.00 0.00 0.00 4.02
2760 3397 2.027561 TGATTGGAGGAGTAAACGGTGG 60.028 50.000 0.00 0.00 0.00 4.61
2761 3398 3.328382 TGATTGGAGGAGTAAACGGTG 57.672 47.619 0.00 0.00 0.00 4.94
2762 3399 5.888982 ATATGATTGGAGGAGTAAACGGT 57.111 39.130 0.00 0.00 0.00 4.83
2763 3400 6.055588 ACAATATGATTGGAGGAGTAAACGG 58.944 40.000 4.35 0.00 0.00 4.44
2764 3401 6.074302 CGACAATATGATTGGAGGAGTAAACG 60.074 42.308 4.35 0.00 0.00 3.60
2765 3402 6.761714 ACGACAATATGATTGGAGGAGTAAAC 59.238 38.462 4.35 0.00 0.00 2.01
2766 3403 6.884832 ACGACAATATGATTGGAGGAGTAAA 58.115 36.000 4.35 0.00 0.00 2.01
2767 3404 6.479972 ACGACAATATGATTGGAGGAGTAA 57.520 37.500 4.35 0.00 0.00 2.24
2768 3405 6.776116 ACTACGACAATATGATTGGAGGAGTA 59.224 38.462 10.42 4.50 0.00 2.59
2769 3406 5.598830 ACTACGACAATATGATTGGAGGAGT 59.401 40.000 4.35 6.28 0.00 3.85
2770 3407 5.923114 CACTACGACAATATGATTGGAGGAG 59.077 44.000 4.35 5.74 0.00 3.69
2771 3408 5.739070 GCACTACGACAATATGATTGGAGGA 60.739 44.000 4.35 0.00 0.00 3.71
2772 3409 4.449068 GCACTACGACAATATGATTGGAGG 59.551 45.833 4.35 0.00 0.00 4.30
2773 3410 5.292765 AGCACTACGACAATATGATTGGAG 58.707 41.667 4.35 0.63 0.00 3.86
2774 3411 5.276461 AGCACTACGACAATATGATTGGA 57.724 39.130 4.35 0.00 0.00 3.53
2775 3412 5.991328 AAGCACTACGACAATATGATTGG 57.009 39.130 4.35 0.00 0.00 3.16
2776 3413 6.346919 GCCTAAGCACTACGACAATATGATTG 60.347 42.308 0.00 0.00 39.53 2.67
2777 3414 5.696724 GCCTAAGCACTACGACAATATGATT 59.303 40.000 0.00 0.00 39.53 2.57
2778 3415 5.230942 GCCTAAGCACTACGACAATATGAT 58.769 41.667 0.00 0.00 39.53 2.45
2779 3416 4.617959 GCCTAAGCACTACGACAATATGA 58.382 43.478 0.00 0.00 39.53 2.15
2780 3417 3.425525 CGCCTAAGCACTACGACAATATG 59.574 47.826 0.00 0.00 39.83 1.78
2781 3418 3.317149 TCGCCTAAGCACTACGACAATAT 59.683 43.478 0.00 0.00 39.83 1.28
2782 3419 2.684374 TCGCCTAAGCACTACGACAATA 59.316 45.455 0.00 0.00 39.83 1.90
2783 3420 1.475280 TCGCCTAAGCACTACGACAAT 59.525 47.619 0.00 0.00 39.83 2.71
2784 3421 0.883153 TCGCCTAAGCACTACGACAA 59.117 50.000 0.00 0.00 39.83 3.18
2785 3422 0.883153 TTCGCCTAAGCACTACGACA 59.117 50.000 0.00 0.00 39.83 4.35
2786 3423 1.546834 CTTCGCCTAAGCACTACGAC 58.453 55.000 0.00 0.00 39.83 4.34
2801 3438 2.892425 GATCCGTGCAGGGCTTCG 60.892 66.667 20.76 2.57 41.52 3.79
2802 3439 2.109126 GTGATCCGTGCAGGGCTTC 61.109 63.158 20.76 18.34 41.52 3.86
2803 3440 2.045926 GTGATCCGTGCAGGGCTT 60.046 61.111 20.76 10.34 41.52 4.35
2804 3441 2.527951 GAAGTGATCCGTGCAGGGCT 62.528 60.000 20.76 11.45 41.52 5.19
2805 3442 2.045926 AAGTGATCCGTGCAGGGC 60.046 61.111 20.76 8.29 41.52 5.19
2806 3443 1.021390 GTGAAGTGATCCGTGCAGGG 61.021 60.000 19.57 19.57 41.52 4.45
2807 3444 1.021390 GGTGAAGTGATCCGTGCAGG 61.021 60.000 0.00 0.00 42.97 4.85
2808 3445 0.320683 TGGTGAAGTGATCCGTGCAG 60.321 55.000 0.00 0.00 0.00 4.41
2809 3446 0.107643 TTGGTGAAGTGATCCGTGCA 59.892 50.000 0.00 0.00 0.00 4.57
2810 3447 0.517316 GTTGGTGAAGTGATCCGTGC 59.483 55.000 0.00 0.00 0.00 5.34
2811 3448 1.531149 GTGTTGGTGAAGTGATCCGTG 59.469 52.381 0.00 0.00 0.00 4.94
2812 3449 1.542547 GGTGTTGGTGAAGTGATCCGT 60.543 52.381 0.00 0.00 0.00 4.69
2813 3450 1.156736 GGTGTTGGTGAAGTGATCCG 58.843 55.000 0.00 0.00 0.00 4.18
2814 3451 1.156736 CGGTGTTGGTGAAGTGATCC 58.843 55.000 0.00 0.00 0.00 3.36
2815 3452 1.798813 GACGGTGTTGGTGAAGTGATC 59.201 52.381 0.00 0.00 0.00 2.92
2816 3453 1.140052 TGACGGTGTTGGTGAAGTGAT 59.860 47.619 0.00 0.00 0.00 3.06
2817 3454 0.537653 TGACGGTGTTGGTGAAGTGA 59.462 50.000 0.00 0.00 0.00 3.41
2818 3455 1.531149 GATGACGGTGTTGGTGAAGTG 59.469 52.381 0.00 0.00 0.00 3.16
2819 3456 1.140052 TGATGACGGTGTTGGTGAAGT 59.860 47.619 0.00 0.00 0.00 3.01
2820 3457 1.531149 GTGATGACGGTGTTGGTGAAG 59.469 52.381 0.00 0.00 0.00 3.02
2821 3458 1.588674 GTGATGACGGTGTTGGTGAA 58.411 50.000 0.00 0.00 0.00 3.18
2822 3459 0.598942 CGTGATGACGGTGTTGGTGA 60.599 55.000 0.00 0.00 42.18 4.02
2823 3460 1.859398 CGTGATGACGGTGTTGGTG 59.141 57.895 0.00 0.00 42.18 4.17
2824 3461 1.959226 GCGTGATGACGGTGTTGGT 60.959 57.895 6.88 0.00 46.20 3.67
2825 3462 2.677003 GGCGTGATGACGGTGTTGG 61.677 63.158 6.88 0.00 46.20 3.77
2826 3463 1.298157 ATGGCGTGATGACGGTGTTG 61.298 55.000 6.88 0.00 46.20 3.33
2827 3464 1.003839 ATGGCGTGATGACGGTGTT 60.004 52.632 6.88 0.00 46.20 3.32
2828 3465 1.447838 GATGGCGTGATGACGGTGT 60.448 57.895 6.88 0.00 46.20 4.16
2829 3466 2.516589 CGATGGCGTGATGACGGTG 61.517 63.158 6.88 0.00 46.20 4.94
2830 3467 2.202743 CGATGGCGTGATGACGGT 60.203 61.111 6.88 0.00 46.20 4.83
2846 3483 0.914551 CGATGAGTTCCGTTAGCACG 59.085 55.000 0.00 0.00 46.71 5.34
2847 3484 1.918609 GTCGATGAGTTCCGTTAGCAC 59.081 52.381 0.00 0.00 0.00 4.40
2848 3485 1.816835 AGTCGATGAGTTCCGTTAGCA 59.183 47.619 0.00 0.00 0.00 3.49
2849 3486 2.159421 TGAGTCGATGAGTTCCGTTAGC 60.159 50.000 0.00 0.00 0.00 3.09
2850 3487 3.759527 TGAGTCGATGAGTTCCGTTAG 57.240 47.619 0.00 0.00 0.00 2.34
2851 3488 4.157105 TGAATGAGTCGATGAGTTCCGTTA 59.843 41.667 0.00 0.00 0.00 3.18
2852 3489 3.056821 TGAATGAGTCGATGAGTTCCGTT 60.057 43.478 0.00 0.00 0.00 4.44
2853 3490 2.492088 TGAATGAGTCGATGAGTTCCGT 59.508 45.455 0.00 0.00 0.00 4.69
2854 3491 3.150848 TGAATGAGTCGATGAGTTCCG 57.849 47.619 0.00 0.00 0.00 4.30
2855 3492 3.247173 GCATGAATGAGTCGATGAGTTCC 59.753 47.826 0.00 0.00 0.00 3.62
2856 3493 3.247173 GGCATGAATGAGTCGATGAGTTC 59.753 47.826 0.00 0.00 0.00 3.01
2857 3494 3.118482 AGGCATGAATGAGTCGATGAGTT 60.118 43.478 0.00 0.00 0.00 3.01
2858 3495 2.433604 AGGCATGAATGAGTCGATGAGT 59.566 45.455 0.00 0.00 0.00 3.41
2859 3496 3.058450 GAGGCATGAATGAGTCGATGAG 58.942 50.000 0.00 0.00 0.00 2.90
2860 3497 2.697229 AGAGGCATGAATGAGTCGATGA 59.303 45.455 0.00 0.00 0.00 2.92
2861 3498 3.109044 AGAGGCATGAATGAGTCGATG 57.891 47.619 0.00 0.00 0.00 3.84
2862 3499 3.894427 AGTAGAGGCATGAATGAGTCGAT 59.106 43.478 0.00 0.00 0.00 3.59
2863 3500 3.067320 CAGTAGAGGCATGAATGAGTCGA 59.933 47.826 0.00 0.00 0.00 4.20
2864 3501 3.379240 CAGTAGAGGCATGAATGAGTCG 58.621 50.000 0.00 0.00 0.00 4.18
2865 3502 3.386078 TCCAGTAGAGGCATGAATGAGTC 59.614 47.826 0.00 0.00 0.00 3.36
2866 3503 3.378512 TCCAGTAGAGGCATGAATGAGT 58.621 45.455 0.00 0.00 0.00 3.41
2867 3504 4.040095 TGATCCAGTAGAGGCATGAATGAG 59.960 45.833 0.00 0.00 0.00 2.90
2868 3505 3.969312 TGATCCAGTAGAGGCATGAATGA 59.031 43.478 0.00 0.00 0.00 2.57
2869 3506 4.347360 TGATCCAGTAGAGGCATGAATG 57.653 45.455 0.00 0.00 0.00 2.67
2870 3507 4.657504 TCTTGATCCAGTAGAGGCATGAAT 59.342 41.667 0.00 0.00 0.00 2.57
2871 3508 4.033009 TCTTGATCCAGTAGAGGCATGAA 58.967 43.478 0.00 0.00 0.00 2.57
2872 3509 3.640498 CTCTTGATCCAGTAGAGGCATGA 59.360 47.826 0.00 0.00 33.41 3.07
2873 3510 3.387374 ACTCTTGATCCAGTAGAGGCATG 59.613 47.826 12.82 0.00 39.73 4.06
2874 3511 3.652055 ACTCTTGATCCAGTAGAGGCAT 58.348 45.455 12.82 0.00 39.73 4.40
2875 3512 3.107402 ACTCTTGATCCAGTAGAGGCA 57.893 47.619 12.82 0.00 39.73 4.75
2876 3513 3.490078 CGAACTCTTGATCCAGTAGAGGC 60.490 52.174 12.82 6.39 39.73 4.70
2877 3514 3.948473 TCGAACTCTTGATCCAGTAGAGG 59.052 47.826 12.82 0.00 39.73 3.69
2878 3515 4.036262 CCTCGAACTCTTGATCCAGTAGAG 59.964 50.000 0.00 0.00 40.91 2.43
2879 3516 3.948473 CCTCGAACTCTTGATCCAGTAGA 59.052 47.826 0.00 0.00 0.00 2.59
2880 3517 3.067461 CCCTCGAACTCTTGATCCAGTAG 59.933 52.174 0.00 0.00 0.00 2.57
2881 3518 3.024547 CCCTCGAACTCTTGATCCAGTA 58.975 50.000 0.00 0.00 0.00 2.74
2882 3519 1.827969 CCCTCGAACTCTTGATCCAGT 59.172 52.381 0.00 0.00 0.00 4.00
2883 3520 2.103373 TCCCTCGAACTCTTGATCCAG 58.897 52.381 0.00 0.00 0.00 3.86
2884 3521 2.231716 TCCCTCGAACTCTTGATCCA 57.768 50.000 0.00 0.00 0.00 3.41
2885 3522 2.432510 ACATCCCTCGAACTCTTGATCC 59.567 50.000 0.00 0.00 0.00 3.36
2886 3523 3.131223 TGACATCCCTCGAACTCTTGATC 59.869 47.826 0.00 0.00 0.00 2.92
2887 3524 3.099905 TGACATCCCTCGAACTCTTGAT 58.900 45.455 0.00 0.00 0.00 2.57
2888 3525 2.525368 TGACATCCCTCGAACTCTTGA 58.475 47.619 0.00 0.00 0.00 3.02
2889 3526 3.452474 GATGACATCCCTCGAACTCTTG 58.548 50.000 3.89 0.00 0.00 3.02
2890 3527 2.099921 CGATGACATCCCTCGAACTCTT 59.900 50.000 9.87 0.00 34.41 2.85
2891 3528 1.678627 CGATGACATCCCTCGAACTCT 59.321 52.381 9.87 0.00 34.41 3.24
2892 3529 1.676529 TCGATGACATCCCTCGAACTC 59.323 52.381 9.87 0.00 38.37 3.01
2893 3530 1.678627 CTCGATGACATCCCTCGAACT 59.321 52.381 9.87 0.00 40.52 3.01
2894 3531 1.866063 GCTCGATGACATCCCTCGAAC 60.866 57.143 9.87 0.00 40.52 3.95
2895 3532 0.385751 GCTCGATGACATCCCTCGAA 59.614 55.000 9.87 0.00 40.52 3.71
2896 3533 0.466372 AGCTCGATGACATCCCTCGA 60.466 55.000 9.87 4.40 38.95 4.04
2897 3534 0.318529 CAGCTCGATGACATCCCTCG 60.319 60.000 9.87 0.00 0.00 4.63
2898 3535 1.035923 TCAGCTCGATGACATCCCTC 58.964 55.000 9.87 0.00 0.00 4.30
2899 3536 1.137872 GTTCAGCTCGATGACATCCCT 59.862 52.381 9.87 1.51 0.00 4.20
2900 3537 1.576356 GTTCAGCTCGATGACATCCC 58.424 55.000 9.87 0.00 0.00 3.85
2901 3538 1.203928 CGTTCAGCTCGATGACATCC 58.796 55.000 9.87 0.00 0.00 3.51
2902 3539 1.585668 CACGTTCAGCTCGATGACATC 59.414 52.381 5.28 5.28 0.00 3.06
2903 3540 1.067565 ACACGTTCAGCTCGATGACAT 60.068 47.619 0.00 0.00 0.00 3.06
2904 3541 0.313987 ACACGTTCAGCTCGATGACA 59.686 50.000 0.00 0.00 0.00 3.58
2905 3542 0.710567 CACACGTTCAGCTCGATGAC 59.289 55.000 0.00 0.00 0.00 3.06
2906 3543 1.008875 GCACACGTTCAGCTCGATGA 61.009 55.000 0.00 0.00 0.00 2.92
2907 3544 1.284297 TGCACACGTTCAGCTCGATG 61.284 55.000 0.00 0.07 0.00 3.84
2908 3545 1.006220 TGCACACGTTCAGCTCGAT 60.006 52.632 0.00 0.00 0.00 3.59
2909 3546 1.661509 CTGCACACGTTCAGCTCGA 60.662 57.895 0.00 0.00 0.00 4.04
2910 3547 1.215014 TTCTGCACACGTTCAGCTCG 61.215 55.000 5.40 0.00 0.00 5.03
2911 3548 0.233332 GTTCTGCACACGTTCAGCTC 59.767 55.000 5.40 0.00 0.00 4.09
2912 3549 0.179073 AGTTCTGCACACGTTCAGCT 60.179 50.000 5.40 0.00 0.00 4.24
2913 3550 0.233332 GAGTTCTGCACACGTTCAGC 59.767 55.000 4.78 1.26 0.00 4.26
2914 3551 0.504384 CGAGTTCTGCACACGTTCAG 59.496 55.000 0.00 0.00 35.01 3.02
2915 3552 0.874175 CCGAGTTCTGCACACGTTCA 60.874 55.000 0.00 0.00 37.75 3.18
2916 3553 0.596600 TCCGAGTTCTGCACACGTTC 60.597 55.000 0.00 0.00 37.75 3.95
2917 3554 0.597637 CTCCGAGTTCTGCACACGTT 60.598 55.000 0.00 0.00 37.75 3.99
2918 3555 1.007271 CTCCGAGTTCTGCACACGT 60.007 57.895 0.00 0.00 37.75 4.49
2919 3556 1.734477 CCTCCGAGTTCTGCACACG 60.734 63.158 0.00 0.00 39.03 4.49
2920 3557 0.946221 CACCTCCGAGTTCTGCACAC 60.946 60.000 0.00 0.00 0.00 3.82
2921 3558 1.367471 CACCTCCGAGTTCTGCACA 59.633 57.895 0.00 0.00 0.00 4.57
2922 3559 2.029844 GCACCTCCGAGTTCTGCAC 61.030 63.158 0.00 0.00 0.00 4.57
2923 3560 2.343758 GCACCTCCGAGTTCTGCA 59.656 61.111 0.00 0.00 0.00 4.41
2924 3561 2.435059 GGCACCTCCGAGTTCTGC 60.435 66.667 0.00 0.00 0.00 4.26
2933 3570 2.505557 CGAACGTACGGCACCTCC 60.506 66.667 21.06 0.00 0.00 4.30
2934 3571 2.505557 CCGAACGTACGGCACCTC 60.506 66.667 21.06 6.84 46.20 3.85
2942 3579 2.159517 ACCGATCAAGTACCGAACGTAC 60.160 50.000 10.35 0.00 46.69 3.67
2943 3580 2.083774 ACCGATCAAGTACCGAACGTA 58.916 47.619 10.35 0.00 0.00 3.57
2944 3581 0.883833 ACCGATCAAGTACCGAACGT 59.116 50.000 10.35 0.00 0.00 3.99
2945 3582 1.652124 CAACCGATCAAGTACCGAACG 59.348 52.381 5.81 5.81 0.00 3.95
2946 3583 2.950433 TCAACCGATCAAGTACCGAAC 58.050 47.619 0.00 0.00 0.00 3.95
2947 3584 3.880047 ATCAACCGATCAAGTACCGAA 57.120 42.857 0.00 0.00 0.00 4.30
2948 3585 3.880047 AATCAACCGATCAAGTACCGA 57.120 42.857 0.00 0.00 0.00 4.69
2949 3586 3.930229 TGAAATCAACCGATCAAGTACCG 59.070 43.478 0.00 0.00 0.00 4.02
2950 3587 5.175859 TCTGAAATCAACCGATCAAGTACC 58.824 41.667 0.00 0.00 0.00 3.34
2951 3588 6.590292 TCTTCTGAAATCAACCGATCAAGTAC 59.410 38.462 0.00 0.00 0.00 2.73
2952 3589 6.590292 GTCTTCTGAAATCAACCGATCAAGTA 59.410 38.462 0.00 0.00 0.00 2.24
2953 3590 5.409826 GTCTTCTGAAATCAACCGATCAAGT 59.590 40.000 0.00 0.00 0.00 3.16
2954 3591 5.445142 CGTCTTCTGAAATCAACCGATCAAG 60.445 44.000 0.00 0.00 0.00 3.02
2955 3592 4.388773 CGTCTTCTGAAATCAACCGATCAA 59.611 41.667 0.00 0.00 0.00 2.57
2956 3593 3.926527 CGTCTTCTGAAATCAACCGATCA 59.073 43.478 0.00 0.00 0.00 2.92
2957 3594 3.927142 ACGTCTTCTGAAATCAACCGATC 59.073 43.478 0.00 0.00 0.00 3.69
2958 3595 3.926616 ACGTCTTCTGAAATCAACCGAT 58.073 40.909 0.00 0.00 0.00 4.18
2959 3596 3.380479 ACGTCTTCTGAAATCAACCGA 57.620 42.857 0.00 0.00 0.00 4.69
2960 3597 4.025229 TCAAACGTCTTCTGAAATCAACCG 60.025 41.667 0.00 0.00 0.00 4.44
2961 3598 5.007724 AGTCAAACGTCTTCTGAAATCAACC 59.992 40.000 0.00 0.00 0.00 3.77
2962 3599 6.049263 AGTCAAACGTCTTCTGAAATCAAC 57.951 37.500 0.00 0.00 0.00 3.18
2963 3600 6.759356 TGTAGTCAAACGTCTTCTGAAATCAA 59.241 34.615 0.00 0.00 0.00 2.57
2964 3601 6.277605 TGTAGTCAAACGTCTTCTGAAATCA 58.722 36.000 0.00 0.00 0.00 2.57
2965 3602 6.764877 TGTAGTCAAACGTCTTCTGAAATC 57.235 37.500 0.00 0.00 0.00 2.17
2966 3603 6.929049 TGATGTAGTCAAACGTCTTCTGAAAT 59.071 34.615 0.00 0.00 36.53 2.17
2967 3604 6.277605 TGATGTAGTCAAACGTCTTCTGAAA 58.722 36.000 0.00 0.00 36.53 2.69
2968 3605 5.838529 TGATGTAGTCAAACGTCTTCTGAA 58.161 37.500 0.00 0.00 36.53 3.02
2969 3606 5.447624 TGATGTAGTCAAACGTCTTCTGA 57.552 39.130 0.00 0.00 36.53 3.27
2980 3617 6.182507 ACTTAAGGTGGTTGATGTAGTCAA 57.817 37.500 7.53 0.00 44.36 3.18
2981 3618 5.818678 ACTTAAGGTGGTTGATGTAGTCA 57.181 39.130 7.53 0.00 34.25 3.41
2982 3619 7.876582 AGTTAACTTAAGGTGGTTGATGTAGTC 59.123 37.037 2.38 0.00 0.00 2.59
2983 3620 7.742767 AGTTAACTTAAGGTGGTTGATGTAGT 58.257 34.615 2.38 0.00 0.00 2.73
2984 3621 8.095169 AGAGTTAACTTAAGGTGGTTGATGTAG 58.905 37.037 10.02 0.00 0.00 2.74
2985 3622 7.970102 AGAGTTAACTTAAGGTGGTTGATGTA 58.030 34.615 10.02 0.00 0.00 2.29
2986 3623 6.838382 AGAGTTAACTTAAGGTGGTTGATGT 58.162 36.000 10.02 0.00 0.00 3.06
2987 3624 7.745620 AAGAGTTAACTTAAGGTGGTTGATG 57.254 36.000 10.02 0.00 0.00 3.07
2988 3625 7.172703 CGAAAGAGTTAACTTAAGGTGGTTGAT 59.827 37.037 10.02 0.00 0.00 2.57
2989 3626 6.480981 CGAAAGAGTTAACTTAAGGTGGTTGA 59.519 38.462 10.02 0.00 0.00 3.18
2990 3627 6.656003 CGAAAGAGTTAACTTAAGGTGGTTG 58.344 40.000 10.02 0.00 0.00 3.77
2991 3628 5.237996 GCGAAAGAGTTAACTTAAGGTGGTT 59.762 40.000 10.02 0.00 0.00 3.67
2992 3629 4.753610 GCGAAAGAGTTAACTTAAGGTGGT 59.246 41.667 10.02 0.00 0.00 4.16
2993 3630 4.995487 AGCGAAAGAGTTAACTTAAGGTGG 59.005 41.667 10.02 0.00 0.00 4.61
2994 3631 6.541111 AAGCGAAAGAGTTAACTTAAGGTG 57.459 37.500 10.02 0.39 0.00 4.00
2995 3632 6.073927 CGAAAGCGAAAGAGTTAACTTAAGGT 60.074 38.462 10.02 2.03 40.82 3.50
2996 3633 6.297353 CGAAAGCGAAAGAGTTAACTTAAGG 58.703 40.000 10.02 0.36 40.82 2.69
2997 3634 6.073927 ACCGAAAGCGAAAGAGTTAACTTAAG 60.074 38.462 10.02 0.00 40.82 1.85
2998 3635 5.754890 ACCGAAAGCGAAAGAGTTAACTTAA 59.245 36.000 10.02 0.00 40.82 1.85
2999 3636 5.291971 ACCGAAAGCGAAAGAGTTAACTTA 58.708 37.500 10.02 0.00 40.82 2.24
3000 3637 4.124970 ACCGAAAGCGAAAGAGTTAACTT 58.875 39.130 10.02 0.00 40.82 2.66
3001 3638 3.725490 ACCGAAAGCGAAAGAGTTAACT 58.275 40.909 8.13 8.13 40.82 2.24
3002 3639 3.739810 AGACCGAAAGCGAAAGAGTTAAC 59.260 43.478 0.00 0.00 40.82 2.01
3003 3640 3.986277 AGACCGAAAGCGAAAGAGTTAA 58.014 40.909 0.00 0.00 40.82 2.01
3004 3641 3.655276 AGACCGAAAGCGAAAGAGTTA 57.345 42.857 0.00 0.00 40.82 2.24
3005 3642 2.528041 AGACCGAAAGCGAAAGAGTT 57.472 45.000 0.00 0.00 40.82 3.01
3006 3643 3.192844 TCATAGACCGAAAGCGAAAGAGT 59.807 43.478 0.00 0.00 40.82 3.24
3007 3644 3.770666 TCATAGACCGAAAGCGAAAGAG 58.229 45.455 0.00 0.00 40.82 2.85
3008 3645 3.428999 CCTCATAGACCGAAAGCGAAAGA 60.429 47.826 0.00 0.00 40.82 2.52
3009 3646 2.860735 CCTCATAGACCGAAAGCGAAAG 59.139 50.000 0.00 0.00 40.82 2.62
3010 3647 2.418197 CCCTCATAGACCGAAAGCGAAA 60.418 50.000 0.00 0.00 40.82 3.46
3011 3648 1.136305 CCCTCATAGACCGAAAGCGAA 59.864 52.381 0.00 0.00 40.82 4.70
3012 3649 0.744874 CCCTCATAGACCGAAAGCGA 59.255 55.000 0.00 0.00 40.82 4.93
3013 3650 0.460311 ACCCTCATAGACCGAAAGCG 59.540 55.000 0.00 0.00 37.24 4.68
3014 3651 2.429610 TGTACCCTCATAGACCGAAAGC 59.570 50.000 0.00 0.00 0.00 3.51
3015 3652 4.501571 CCATGTACCCTCATAGACCGAAAG 60.502 50.000 0.00 0.00 0.00 2.62
3016 3653 3.386726 CCATGTACCCTCATAGACCGAAA 59.613 47.826 0.00 0.00 0.00 3.46
3017 3654 2.963101 CCATGTACCCTCATAGACCGAA 59.037 50.000 0.00 0.00 0.00 4.30
3018 3655 2.176148 TCCATGTACCCTCATAGACCGA 59.824 50.000 0.00 0.00 0.00 4.69
3019 3656 2.296471 GTCCATGTACCCTCATAGACCG 59.704 54.545 0.00 0.00 32.96 4.79
3020 3657 3.069729 GTGTCCATGTACCCTCATAGACC 59.930 52.174 0.00 0.00 36.27 3.85
3021 3658 3.704566 TGTGTCCATGTACCCTCATAGAC 59.295 47.826 0.00 0.00 37.12 2.59
3022 3659 3.704566 GTGTGTCCATGTACCCTCATAGA 59.295 47.826 0.00 0.00 0.00 1.98
3023 3660 3.706594 AGTGTGTCCATGTACCCTCATAG 59.293 47.826 0.00 0.00 0.00 2.23
3024 3661 3.704566 GAGTGTGTCCATGTACCCTCATA 59.295 47.826 0.00 0.00 0.00 2.15
3025 3662 2.501723 GAGTGTGTCCATGTACCCTCAT 59.498 50.000 0.00 0.00 0.00 2.90
3026 3663 1.899814 GAGTGTGTCCATGTACCCTCA 59.100 52.381 0.00 0.00 0.00 3.86
3027 3664 2.166664 GAGAGTGTGTCCATGTACCCTC 59.833 54.545 0.00 0.00 0.00 4.30
3028 3665 2.180276 GAGAGTGTGTCCATGTACCCT 58.820 52.381 0.00 0.00 0.00 4.34
3029 3666 1.207329 GGAGAGTGTGTCCATGTACCC 59.793 57.143 0.00 0.00 33.84 3.69
3030 3667 1.207329 GGGAGAGTGTGTCCATGTACC 59.793 57.143 0.00 0.00 35.57 3.34
3031 3668 1.207329 GGGGAGAGTGTGTCCATGTAC 59.793 57.143 0.00 0.00 35.57 2.90
3032 3669 1.078823 AGGGGAGAGTGTGTCCATGTA 59.921 52.381 0.00 0.00 35.57 2.29
3033 3670 0.178891 AGGGGAGAGTGTGTCCATGT 60.179 55.000 0.00 0.00 35.57 3.21
3034 3671 0.539051 GAGGGGAGAGTGTGTCCATG 59.461 60.000 0.00 0.00 35.57 3.66
3035 3672 0.415429 AGAGGGGAGAGTGTGTCCAT 59.585 55.000 0.00 0.00 35.57 3.41
3036 3673 0.251832 GAGAGGGGAGAGTGTGTCCA 60.252 60.000 0.00 0.00 35.57 4.02
3037 3674 1.316706 CGAGAGGGGAGAGTGTGTCC 61.317 65.000 0.00 0.00 0.00 4.02
3038 3675 0.609681 ACGAGAGGGGAGAGTGTGTC 60.610 60.000 0.00 0.00 0.00 3.67
3039 3676 0.178958 AACGAGAGGGGAGAGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
3040 3677 0.244994 CAACGAGAGGGGAGAGTGTG 59.755 60.000 0.00 0.00 0.00 3.82
3041 3678 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
3042 3679 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
3043 3680 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
3044 3681 1.698506 ATAGCAACGAGAGGGGAGAG 58.301 55.000 0.00 0.00 0.00 3.20
3045 3682 2.092049 TGTATAGCAACGAGAGGGGAGA 60.092 50.000 0.00 0.00 0.00 3.71
3046 3683 2.307768 TGTATAGCAACGAGAGGGGAG 58.692 52.381 0.00 0.00 0.00 4.30
3047 3684 2.447408 TGTATAGCAACGAGAGGGGA 57.553 50.000 0.00 0.00 0.00 4.81
3048 3685 2.894126 AGATGTATAGCAACGAGAGGGG 59.106 50.000 0.00 0.00 0.00 4.79
3049 3686 4.279671 AGAAGATGTATAGCAACGAGAGGG 59.720 45.833 0.00 0.00 0.00 4.30
3050 3687 5.446143 AGAAGATGTATAGCAACGAGAGG 57.554 43.478 0.00 0.00 0.00 3.69
3051 3688 7.428282 TCTAGAAGATGTATAGCAACGAGAG 57.572 40.000 0.00 0.00 0.00 3.20
3052 3689 7.987750 ATCTAGAAGATGTATAGCAACGAGA 57.012 36.000 0.00 0.00 32.80 4.04
3053 3690 9.157104 TCTATCTAGAAGATGTATAGCAACGAG 57.843 37.037 0.00 0.00 35.37 4.18
3054 3691 9.674068 ATCTATCTAGAAGATGTATAGCAACGA 57.326 33.333 13.39 0.00 35.37 3.85
3055 3692 9.929722 GATCTATCTAGAAGATGTATAGCAACG 57.070 37.037 17.03 0.00 35.37 4.10
3059 3696 9.950680 GCAAGATCTATCTAGAAGATGTATAGC 57.049 37.037 17.03 14.33 35.37 2.97
3061 3698 9.674068 ACGCAAGATCTATCTAGAAGATGTATA 57.326 33.333 17.03 0.00 36.70 1.47
3062 3699 8.458052 CACGCAAGATCTATCTAGAAGATGTAT 58.542 37.037 17.03 5.65 36.70 2.29
3063 3700 7.811653 CACGCAAGATCTATCTAGAAGATGTA 58.188 38.462 17.03 0.00 36.70 2.29
3064 3701 6.676950 CACGCAAGATCTATCTAGAAGATGT 58.323 40.000 17.03 12.51 36.70 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.