Multiple sequence alignment - TraesCS3B01G270100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G270100 chr3B 100.000 3093 0 0 1 3093 434674396 434671304 0.000000e+00 5712
1 TraesCS3B01G270100 chr3B 100.000 1334 0 0 3436 4769 434670961 434669628 0.000000e+00 2464
2 TraesCS3B01G270100 chr3B 95.918 147 3 3 2860 3004 168268815 168268670 7.980000e-58 235
3 TraesCS3B01G270100 chr3A 95.491 2218 78 13 564 2764 454175926 454173714 0.000000e+00 3522
4 TraesCS3B01G270100 chr3A 94.363 958 38 6 3437 4392 454173534 454172591 0.000000e+00 1456
5 TraesCS3B01G270100 chr3A 95.278 360 15 2 4405 4763 454172606 454172248 1.930000e-158 569
6 TraesCS3B01G270100 chr3D 94.633 2236 82 23 536 2766 336840248 336838046 0.000000e+00 3430
7 TraesCS3B01G270100 chr3D 96.154 780 24 3 3437 4216 336837864 336837091 0.000000e+00 1269
8 TraesCS3B01G270100 chr3D 87.788 565 32 7 4201 4763 336832814 336832285 1.130000e-175 627
9 TraesCS3B01G270100 chr3D 94.340 106 6 0 2988 3093 336838069 336837964 3.820000e-36 163
10 TraesCS3B01G270100 chr3D 75.646 271 37 21 9 258 336870320 336870058 1.810000e-19 108
11 TraesCS3B01G270100 chr6B 100.000 133 0 0 2860 2992 713262517 713262385 3.690000e-61 246
12 TraesCS3B01G270100 chr5B 97.260 146 2 2 2860 3003 138783119 138783264 3.690000e-61 246
13 TraesCS3B01G270100 chr5B 96.026 151 6 0 383 533 603979854 603980004 3.690000e-61 246
14 TraesCS3B01G270100 chr5B 91.447 152 12 1 384 535 532323077 532323227 1.740000e-49 207
15 TraesCS3B01G270100 chr5B 95.868 121 2 2 2742 2859 138779306 138779426 4.870000e-45 193
16 TraesCS3B01G270100 chr7B 99.248 133 1 0 2860 2992 147588242 147588110 1.710000e-59 241
17 TraesCS3B01G270100 chr1B 98.529 136 1 1 2857 2992 320780962 320780828 6.170000e-59 239
18 TraesCS3B01G270100 chrUn 96.552 145 2 1 2860 3004 419797096 419797237 2.220000e-58 237
19 TraesCS3B01G270100 chrUn 96.552 145 2 1 2860 3004 435604135 435604276 2.220000e-58 237
20 TraesCS3B01G270100 chr4D 97.810 137 3 0 2860 2996 83143686 83143550 2.220000e-58 237
21 TraesCS3B01G270100 chr4D 98.214 112 1 1 2748 2859 248937700 248937810 1.350000e-45 195
22 TraesCS3B01G270100 chr4D 89.744 156 9 3 380 535 75272766 75272914 4.870000e-45 193
23 TraesCS3B01G270100 chr2D 97.826 138 2 1 2860 2997 106329521 106329385 2.220000e-58 237
24 TraesCS3B01G270100 chr2D 92.208 154 12 0 383 536 38504887 38504734 8.040000e-53 219
25 TraesCS3B01G270100 chr2D 96.581 117 3 1 2743 2859 442879078 442879193 4.870000e-45 193
26 TraesCS3B01G270100 chr1D 92.857 154 11 0 382 535 111602346 111602193 1.730000e-54 224
27 TraesCS3B01G270100 chr1D 93.333 150 6 4 383 530 114352170 114352317 8.040000e-53 219
28 TraesCS3B01G270100 chr1D 92.208 154 12 0 382 535 334248257 334248410 8.040000e-53 219
29 TraesCS3B01G270100 chr1D 92.105 152 12 0 384 535 371215055 371214904 1.040000e-51 215
30 TraesCS3B01G270100 chr1D 90.000 150 15 0 384 533 319358128 319357979 1.350000e-45 195
31 TraesCS3B01G270100 chr2B 91.447 152 13 0 384 535 697983722 697983873 4.840000e-50 209
32 TraesCS3B01G270100 chr2B 99.099 111 1 0 2749 2859 31490599 31490709 2.910000e-47 200
33 TraesCS3B01G270100 chr2B 97.391 115 1 2 2746 2859 367730515 367730628 1.350000e-45 195
34 TraesCS3B01G270100 chr4A 91.333 150 13 0 387 536 740601047 740600898 6.260000e-49 206
35 TraesCS3B01G270100 chr4A 94.355 124 5 2 2737 2859 133053201 133053323 6.300000e-44 189
36 TraesCS3B01G270100 chr7A 98.214 112 1 1 2748 2859 495455520 495455410 1.350000e-45 195
37 TraesCS3B01G270100 chr2A 97.391 115 1 2 2745 2859 333765841 333765953 1.350000e-45 195
38 TraesCS3B01G270100 chr7D 99.065 107 0 1 2753 2859 263324853 263324748 1.750000e-44 191
39 TraesCS3B01G270100 chr6D 88.667 150 12 1 383 532 324597056 324597200 1.360000e-40 178
40 TraesCS3B01G270100 chr6A 85.430 151 21 1 384 533 215016446 215016296 6.390000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G270100 chr3B 434669628 434674396 4768 True 4088.000000 5712 100.000000 1 4769 2 chr3B.!!$R2 4768
1 TraesCS3B01G270100 chr3A 454172248 454175926 3678 True 1849.000000 3522 95.044000 564 4763 3 chr3A.!!$R1 4199
2 TraesCS3B01G270100 chr3D 336837091 336840248 3157 True 1620.666667 3430 95.042333 536 4216 3 chr3D.!!$R3 3680
3 TraesCS3B01G270100 chr3D 336832285 336832814 529 True 627.000000 627 87.788000 4201 4763 1 chr3D.!!$R1 562
4 TraesCS3B01G270100 chr5B 138779306 138783264 3958 False 219.500000 246 96.564000 2742 3003 2 chr5B.!!$F3 261

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
521 522 0.031585 ACAAGCAAGAGTCGTACGCA 59.968 50.000 11.24 0.0 0.00 5.24 F
652 655 0.250234 TCGCAAACCCCTCTCATCTG 59.750 55.000 0.00 0.0 0.00 2.90 F
2237 2255 1.203063 TGCTACTCCAGAGTCCACTGT 60.203 52.381 3.00 0.0 42.54 3.55 F
2750 2770 0.539669 GGTTTCCACCCCCTCTTGTG 60.540 60.000 0.00 0.0 37.03 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2237 2255 0.249868 CTCGGTGAGTGTGGCTTTCA 60.250 55.000 0.00 0.0 0.00 2.69 R
2636 2656 3.046087 GCTCTGCAGCAACAGCGA 61.046 61.111 9.47 0.0 46.06 4.93 R
3435 7147 0.966920 CTCTGGTACACCCAACGAGT 59.033 55.000 0.00 0.0 44.65 4.18 R
4326 8039 0.178953 AACTGTGCAGCCCCAAGATT 60.179 50.000 0.00 0.0 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.195334 GGGCGGATCCATGGCACT 62.195 66.667 13.41 0.00 36.21 4.40
21 22 2.903855 GGCGGATCCATGGCACTG 60.904 66.667 13.41 9.53 34.01 3.66
22 23 2.903855 GCGGATCCATGGCACTGG 60.904 66.667 13.41 8.99 37.66 4.00
23 24 2.903855 CGGATCCATGGCACTGGC 60.904 66.667 13.41 0.00 36.16 4.85
24 25 2.903855 GGATCCATGGCACTGGCG 60.904 66.667 6.96 0.00 42.47 5.69
25 26 2.190313 GATCCATGGCACTGGCGA 59.810 61.111 6.96 0.00 42.47 5.54
26 27 2.124570 ATCCATGGCACTGGCGAC 60.125 61.111 6.96 0.00 42.47 5.19
27 28 4.758251 TCCATGGCACTGGCGACG 62.758 66.667 6.96 0.00 42.47 5.12
47 48 3.334751 CGCGAGCGGTGAACACAA 61.335 61.111 9.90 0.00 35.56 3.33
48 49 2.551270 GCGAGCGGTGAACACAAG 59.449 61.111 7.25 1.96 0.00 3.16
49 50 2.551270 CGAGCGGTGAACACAAGC 59.449 61.111 13.58 13.58 36.97 4.01
50 51 2.243957 CGAGCGGTGAACACAAGCA 61.244 57.895 19.91 0.00 38.40 3.91
51 52 1.279840 GAGCGGTGAACACAAGCAC 59.720 57.895 19.91 13.39 38.40 4.40
54 55 3.443588 GGTGAACACAAGCACCCC 58.556 61.111 7.25 0.00 46.91 4.95
55 56 2.200337 GGTGAACACAAGCACCCCC 61.200 63.158 7.25 0.00 46.91 5.40
56 57 2.203280 TGAACACAAGCACCCCCG 60.203 61.111 0.00 0.00 0.00 5.73
57 58 2.112297 GAACACAAGCACCCCCGA 59.888 61.111 0.00 0.00 0.00 5.14
58 59 1.966451 GAACACAAGCACCCCCGAG 60.966 63.158 0.00 0.00 0.00 4.63
59 60 4.643387 ACACAAGCACCCCCGAGC 62.643 66.667 0.00 0.00 0.00 5.03
70 71 3.788766 CCCGAGCGCCAAAACGAG 61.789 66.667 2.29 0.00 34.06 4.18
71 72 3.788766 CCGAGCGCCAAAACGAGG 61.789 66.667 2.29 0.00 34.06 4.63
72 73 3.041940 CGAGCGCCAAAACGAGGT 61.042 61.111 2.29 0.00 34.06 3.85
73 74 2.556287 GAGCGCCAAAACGAGGTG 59.444 61.111 2.29 0.00 39.63 4.00
74 75 2.966309 GAGCGCCAAAACGAGGTGG 61.966 63.158 2.29 0.00 37.14 4.61
75 76 2.975799 GCGCCAAAACGAGGTGGA 60.976 61.111 0.00 0.00 37.03 4.02
76 77 2.548295 GCGCCAAAACGAGGTGGAA 61.548 57.895 0.00 0.00 37.03 3.53
77 78 1.862602 GCGCCAAAACGAGGTGGAAT 61.863 55.000 0.00 0.00 37.03 3.01
78 79 0.109781 CGCCAAAACGAGGTGGAATG 60.110 55.000 7.11 0.00 37.03 2.67
79 80 1.243902 GCCAAAACGAGGTGGAATGA 58.756 50.000 7.11 0.00 37.03 2.57
80 81 1.818674 GCCAAAACGAGGTGGAATGAT 59.181 47.619 7.11 0.00 37.03 2.45
81 82 2.415893 GCCAAAACGAGGTGGAATGATG 60.416 50.000 7.11 0.00 37.03 3.07
82 83 2.415893 CCAAAACGAGGTGGAATGATGC 60.416 50.000 0.00 0.00 37.03 3.91
83 84 1.086696 AAACGAGGTGGAATGATGCG 58.913 50.000 0.00 0.00 0.00 4.73
84 85 0.249120 AACGAGGTGGAATGATGCGA 59.751 50.000 0.00 0.00 0.00 5.10
85 86 0.460284 ACGAGGTGGAATGATGCGAC 60.460 55.000 0.00 0.00 0.00 5.19
86 87 1.482621 CGAGGTGGAATGATGCGACG 61.483 60.000 0.00 0.00 0.00 5.12
87 88 1.766143 GAGGTGGAATGATGCGACGC 61.766 60.000 14.19 14.19 0.00 5.19
88 89 2.106074 GGTGGAATGATGCGACGCA 61.106 57.895 26.68 26.68 44.86 5.24
89 90 1.643868 GGTGGAATGATGCGACGCAA 61.644 55.000 28.24 12.18 43.62 4.85
90 91 0.167908 GTGGAATGATGCGACGCAAA 59.832 50.000 28.24 18.49 43.62 3.68
91 92 0.447406 TGGAATGATGCGACGCAAAG 59.553 50.000 28.24 0.00 43.62 2.77
92 93 0.863119 GGAATGATGCGACGCAAAGC 60.863 55.000 28.24 18.78 43.62 3.51
103 104 2.877691 GCAAAGCGGCGGAGATTT 59.122 55.556 9.78 0.00 0.00 2.17
104 105 1.226407 GCAAAGCGGCGGAGATTTC 60.226 57.895 9.78 0.00 0.00 2.17
105 106 1.922135 GCAAAGCGGCGGAGATTTCA 61.922 55.000 9.78 0.00 0.00 2.69
106 107 0.097674 CAAAGCGGCGGAGATTTCAG 59.902 55.000 9.78 0.00 0.00 3.02
107 108 1.026718 AAAGCGGCGGAGATTTCAGG 61.027 55.000 9.78 0.00 0.00 3.86
108 109 3.577313 GCGGCGGAGATTTCAGGC 61.577 66.667 9.78 0.00 39.99 4.85
109 110 2.187946 CGGCGGAGATTTCAGGCT 59.812 61.111 0.00 0.00 40.95 4.58
110 111 2.176273 CGGCGGAGATTTCAGGCTG 61.176 63.158 8.58 8.58 40.95 4.85
111 112 2.476320 GGCGGAGATTTCAGGCTGC 61.476 63.158 10.34 0.00 40.18 5.25
112 113 2.817423 GCGGAGATTTCAGGCTGCG 61.817 63.158 10.34 6.85 46.64 5.18
113 114 2.817423 CGGAGATTTCAGGCTGCGC 61.817 63.158 10.34 0.00 39.00 6.09
114 115 1.746615 GGAGATTTCAGGCTGCGCA 60.747 57.895 10.98 10.98 0.00 6.09
115 116 1.712977 GGAGATTTCAGGCTGCGCAG 61.713 60.000 32.83 32.83 0.00 5.18
116 117 1.712977 GAGATTTCAGGCTGCGCAGG 61.713 60.000 36.47 21.38 0.00 4.85
117 118 2.753043 ATTTCAGGCTGCGCAGGG 60.753 61.111 36.47 16.13 0.00 4.45
130 131 4.473520 CAGGGCAGCCACGGGTAG 62.474 72.222 15.19 0.00 0.00 3.18
133 134 4.715523 GGCAGCCACGGGTAGCAA 62.716 66.667 6.55 0.00 0.00 3.91
134 135 3.431725 GCAGCCACGGGTAGCAAC 61.432 66.667 0.00 0.00 0.00 4.17
135 136 2.031919 CAGCCACGGGTAGCAACA 59.968 61.111 0.00 0.00 0.00 3.33
136 137 1.599518 CAGCCACGGGTAGCAACAA 60.600 57.895 0.00 0.00 0.00 2.83
137 138 1.149627 AGCCACGGGTAGCAACAAA 59.850 52.632 0.00 0.00 0.00 2.83
138 139 0.889186 AGCCACGGGTAGCAACAAAG 60.889 55.000 0.00 0.00 0.00 2.77
139 140 1.862602 GCCACGGGTAGCAACAAAGG 61.863 60.000 0.00 0.00 0.00 3.11
140 141 1.241315 CCACGGGTAGCAACAAAGGG 61.241 60.000 0.00 0.00 0.00 3.95
141 142 1.074248 ACGGGTAGCAACAAAGGGG 59.926 57.895 0.00 0.00 0.00 4.79
142 143 1.074248 CGGGTAGCAACAAAGGGGT 59.926 57.895 0.00 0.00 0.00 4.95
143 144 1.241315 CGGGTAGCAACAAAGGGGTG 61.241 60.000 0.00 0.00 0.00 4.61
144 145 0.898326 GGGTAGCAACAAAGGGGTGG 60.898 60.000 0.00 0.00 0.00 4.61
145 146 0.898326 GGTAGCAACAAAGGGGTGGG 60.898 60.000 0.00 0.00 0.00 4.61
146 147 0.111639 GTAGCAACAAAGGGGTGGGA 59.888 55.000 0.00 0.00 0.00 4.37
147 148 0.854218 TAGCAACAAAGGGGTGGGAA 59.146 50.000 0.00 0.00 0.00 3.97
148 149 0.190815 AGCAACAAAGGGGTGGGAAT 59.809 50.000 0.00 0.00 0.00 3.01
149 150 1.055849 GCAACAAAGGGGTGGGAATT 58.944 50.000 0.00 0.00 0.00 2.17
150 151 1.419762 GCAACAAAGGGGTGGGAATTT 59.580 47.619 0.00 0.00 0.00 1.82
151 152 2.810032 GCAACAAAGGGGTGGGAATTTG 60.810 50.000 0.00 0.00 38.35 2.32
152 153 1.055849 ACAAAGGGGTGGGAATTTGC 58.944 50.000 0.00 0.00 36.36 3.68
153 154 0.037419 CAAAGGGGTGGGAATTTGCG 60.037 55.000 0.00 0.00 0.00 4.85
154 155 1.191489 AAAGGGGTGGGAATTTGCGG 61.191 55.000 0.00 0.00 0.00 5.69
155 156 3.770040 GGGGTGGGAATTTGCGGC 61.770 66.667 0.00 0.00 0.00 6.53
156 157 4.128388 GGGTGGGAATTTGCGGCG 62.128 66.667 0.51 0.51 0.00 6.46
157 158 4.128388 GGTGGGAATTTGCGGCGG 62.128 66.667 9.78 0.00 0.00 6.13
158 159 4.794439 GTGGGAATTTGCGGCGGC 62.794 66.667 9.78 9.68 40.52 6.53
169 170 3.905678 CGGCGGCAGGGAGTAGAG 61.906 72.222 10.53 0.00 0.00 2.43
170 171 3.541713 GGCGGCAGGGAGTAGAGG 61.542 72.222 3.07 0.00 0.00 3.69
171 172 4.228567 GCGGCAGGGAGTAGAGGC 62.229 72.222 0.00 0.00 0.00 4.70
172 173 2.759973 CGGCAGGGAGTAGAGGCA 60.760 66.667 0.00 0.00 0.00 4.75
173 174 2.790791 CGGCAGGGAGTAGAGGCAG 61.791 68.421 0.00 0.00 0.00 4.85
174 175 2.503546 GCAGGGAGTAGAGGCAGC 59.496 66.667 0.00 0.00 0.00 5.25
175 176 2.811101 CAGGGAGTAGAGGCAGCG 59.189 66.667 0.00 0.00 0.00 5.18
176 177 2.443016 AGGGAGTAGAGGCAGCGG 60.443 66.667 0.00 0.00 0.00 5.52
177 178 2.442272 GGGAGTAGAGGCAGCGGA 60.442 66.667 0.00 0.00 0.00 5.54
178 179 2.058595 GGGAGTAGAGGCAGCGGAA 61.059 63.158 0.00 0.00 0.00 4.30
179 180 1.439644 GGAGTAGAGGCAGCGGAAG 59.560 63.158 0.00 0.00 0.00 3.46
180 181 1.324005 GGAGTAGAGGCAGCGGAAGT 61.324 60.000 0.00 0.00 0.00 3.01
181 182 0.179124 GAGTAGAGGCAGCGGAAGTG 60.179 60.000 0.00 0.00 0.00 3.16
182 183 0.612174 AGTAGAGGCAGCGGAAGTGA 60.612 55.000 0.00 0.00 0.00 3.41
183 184 0.179124 GTAGAGGCAGCGGAAGTGAG 60.179 60.000 0.00 0.00 0.00 3.51
184 185 0.612174 TAGAGGCAGCGGAAGTGAGT 60.612 55.000 0.00 0.00 0.00 3.41
185 186 1.004440 GAGGCAGCGGAAGTGAGTT 60.004 57.895 0.00 0.00 0.00 3.01
186 187 0.603975 GAGGCAGCGGAAGTGAGTTT 60.604 55.000 0.00 0.00 0.00 2.66
187 188 0.886490 AGGCAGCGGAAGTGAGTTTG 60.886 55.000 0.00 0.00 0.00 2.93
188 189 1.576421 GCAGCGGAAGTGAGTTTGG 59.424 57.895 0.00 0.00 0.00 3.28
189 190 1.576421 CAGCGGAAGTGAGTTTGGC 59.424 57.895 0.00 0.00 0.00 4.52
190 191 1.600916 AGCGGAAGTGAGTTTGGCC 60.601 57.895 0.00 0.00 0.00 5.36
191 192 1.896660 GCGGAAGTGAGTTTGGCCA 60.897 57.895 0.00 0.00 0.00 5.36
192 193 1.452145 GCGGAAGTGAGTTTGGCCAA 61.452 55.000 16.05 16.05 0.00 4.52
193 194 0.310854 CGGAAGTGAGTTTGGCCAAC 59.689 55.000 20.35 13.66 35.32 3.77
194 195 1.398692 GGAAGTGAGTTTGGCCAACA 58.601 50.000 20.35 10.78 37.93 3.33
195 196 1.338020 GGAAGTGAGTTTGGCCAACAG 59.662 52.381 20.35 0.00 37.93 3.16
196 197 2.297701 GAAGTGAGTTTGGCCAACAGA 58.702 47.619 20.35 0.00 37.93 3.41
197 198 2.664402 AGTGAGTTTGGCCAACAGAT 57.336 45.000 20.35 3.90 37.93 2.90
198 199 3.788227 AGTGAGTTTGGCCAACAGATA 57.212 42.857 20.35 0.00 37.93 1.98
199 200 3.679389 AGTGAGTTTGGCCAACAGATAG 58.321 45.455 20.35 0.00 37.93 2.08
200 201 2.749621 GTGAGTTTGGCCAACAGATAGG 59.250 50.000 20.35 0.00 37.93 2.57
201 202 2.290896 TGAGTTTGGCCAACAGATAGGG 60.291 50.000 20.35 0.00 37.93 3.53
202 203 1.005924 AGTTTGGCCAACAGATAGGGG 59.994 52.381 20.35 0.00 37.93 4.79
203 204 0.324275 TTTGGCCAACAGATAGGGGC 60.324 55.000 20.35 0.00 46.62 5.80
205 206 2.195956 GCCAACAGATAGGGGCCC 59.804 66.667 17.12 17.12 40.55 5.80
206 207 2.510906 CCAACAGATAGGGGCCCG 59.489 66.667 18.95 4.63 0.00 6.13
207 208 2.070039 CCAACAGATAGGGGCCCGA 61.070 63.158 18.95 13.75 0.00 5.14
208 209 1.146263 CAACAGATAGGGGCCCGAC 59.854 63.158 18.95 12.67 0.00 4.79
209 210 1.306654 AACAGATAGGGGCCCGACA 60.307 57.895 18.95 7.01 0.00 4.35
210 211 0.912487 AACAGATAGGGGCCCGACAA 60.912 55.000 18.95 4.49 0.00 3.18
211 212 0.912487 ACAGATAGGGGCCCGACAAA 60.912 55.000 18.95 1.61 0.00 2.83
212 213 0.254747 CAGATAGGGGCCCGACAAAA 59.745 55.000 18.95 0.00 0.00 2.44
213 214 1.133792 CAGATAGGGGCCCGACAAAAT 60.134 52.381 18.95 5.09 0.00 1.82
214 215 1.143073 AGATAGGGGCCCGACAAAATC 59.857 52.381 18.95 13.82 0.00 2.17
230 231 7.636363 GACAAAATCGAATGAAATCACGTAG 57.364 36.000 0.00 0.00 0.00 3.51
231 232 7.359262 ACAAAATCGAATGAAATCACGTAGA 57.641 32.000 0.00 0.00 0.00 2.59
232 233 7.974675 ACAAAATCGAATGAAATCACGTAGAT 58.025 30.769 0.00 0.00 39.09 1.98
233 234 9.093970 ACAAAATCGAATGAAATCACGTAGATA 57.906 29.630 0.00 0.00 35.39 1.98
236 237 7.818493 ATCGAATGAAATCACGTAGATATGG 57.182 36.000 0.00 0.00 35.39 2.74
237 238 6.977213 TCGAATGAAATCACGTAGATATGGA 58.023 36.000 0.00 0.00 35.39 3.41
238 239 7.084486 TCGAATGAAATCACGTAGATATGGAG 58.916 38.462 0.00 0.00 35.39 3.86
239 240 6.309009 CGAATGAAATCACGTAGATATGGAGG 59.691 42.308 0.00 0.00 35.39 4.30
240 241 6.918067 ATGAAATCACGTAGATATGGAGGA 57.082 37.500 0.00 0.00 35.39 3.71
241 242 6.724893 TGAAATCACGTAGATATGGAGGAA 57.275 37.500 0.00 0.00 35.39 3.36
242 243 7.119709 TGAAATCACGTAGATATGGAGGAAA 57.880 36.000 0.00 0.00 35.39 3.13
243 244 7.735917 TGAAATCACGTAGATATGGAGGAAAT 58.264 34.615 0.00 0.00 35.39 2.17
244 245 7.657354 TGAAATCACGTAGATATGGAGGAAATG 59.343 37.037 0.00 0.00 35.39 2.32
245 246 6.918067 ATCACGTAGATATGGAGGAAATGA 57.082 37.500 0.00 0.00 34.43 2.57
246 247 6.332735 TCACGTAGATATGGAGGAAATGAG 57.667 41.667 0.00 0.00 0.00 2.90
247 248 4.926238 CACGTAGATATGGAGGAAATGAGC 59.074 45.833 0.00 0.00 0.00 4.26
248 249 4.835615 ACGTAGATATGGAGGAAATGAGCT 59.164 41.667 0.00 0.00 0.00 4.09
249 250 5.047660 ACGTAGATATGGAGGAAATGAGCTC 60.048 44.000 6.82 6.82 0.00 4.09
250 251 4.533919 AGATATGGAGGAAATGAGCTCG 57.466 45.455 9.64 0.00 0.00 5.03
251 252 2.533266 TATGGAGGAAATGAGCTCGC 57.467 50.000 9.64 0.00 0.00 5.03
252 253 0.543277 ATGGAGGAAATGAGCTCGCA 59.457 50.000 9.64 0.00 0.00 5.10
253 254 0.107993 TGGAGGAAATGAGCTCGCAG 60.108 55.000 9.64 0.00 0.00 5.18
254 255 0.176680 GGAGGAAATGAGCTCGCAGA 59.823 55.000 9.64 0.00 0.00 4.26
255 256 1.202627 GGAGGAAATGAGCTCGCAGAT 60.203 52.381 9.64 0.00 33.89 2.90
256 257 2.559440 GAGGAAATGAGCTCGCAGATT 58.441 47.619 9.64 0.00 33.89 2.40
257 258 2.543430 GAGGAAATGAGCTCGCAGATTC 59.457 50.000 9.64 8.45 33.89 2.52
258 259 2.170187 AGGAAATGAGCTCGCAGATTCT 59.830 45.455 9.64 0.00 33.89 2.40
259 260 2.543430 GGAAATGAGCTCGCAGATTCTC 59.457 50.000 9.64 4.29 36.84 2.87
260 261 1.850377 AATGAGCTCGCAGATTCTCG 58.150 50.000 9.64 0.00 38.36 4.04
261 262 0.597118 ATGAGCTCGCAGATTCTCGC 60.597 55.000 9.64 0.00 38.36 5.03
262 263 1.226802 GAGCTCGCAGATTCTCGCA 60.227 57.895 0.00 0.00 33.89 5.10
263 264 0.803768 GAGCTCGCAGATTCTCGCAA 60.804 55.000 0.00 0.00 33.89 4.85
264 265 0.179089 AGCTCGCAGATTCTCGCAAT 60.179 50.000 8.24 0.00 33.89 3.56
265 266 0.654683 GCTCGCAGATTCTCGCAATT 59.345 50.000 8.24 0.00 33.89 2.32
266 267 1.063174 GCTCGCAGATTCTCGCAATTT 59.937 47.619 8.24 0.00 33.89 1.82
267 268 2.476854 GCTCGCAGATTCTCGCAATTTT 60.477 45.455 8.24 0.00 33.89 1.82
268 269 3.751621 CTCGCAGATTCTCGCAATTTTT 58.248 40.909 8.24 0.00 33.89 1.94
305 306 7.865820 ACCAGATTTGAAGAATCTAATCAGGA 58.134 34.615 21.63 0.00 47.00 3.86
306 307 7.772757 ACCAGATTTGAAGAATCTAATCAGGAC 59.227 37.037 21.63 1.66 47.00 3.85
307 308 7.042187 CCAGATTTGAAGAATCTAATCAGGACG 60.042 40.741 14.56 0.00 47.00 4.79
308 309 6.989169 AGATTTGAAGAATCTAATCAGGACGG 59.011 38.462 12.94 0.00 44.88 4.79
309 310 5.932619 TTGAAGAATCTAATCAGGACGGA 57.067 39.130 0.00 0.00 0.00 4.69
310 311 6.485830 TTGAAGAATCTAATCAGGACGGAT 57.514 37.500 0.00 0.00 0.00 4.18
311 312 7.597288 TTGAAGAATCTAATCAGGACGGATA 57.403 36.000 0.00 0.00 0.00 2.59
312 313 7.782897 TGAAGAATCTAATCAGGACGGATAT 57.217 36.000 0.00 0.00 0.00 1.63
313 314 7.606349 TGAAGAATCTAATCAGGACGGATATG 58.394 38.462 0.00 0.00 0.00 1.78
314 315 5.971763 AGAATCTAATCAGGACGGATATGC 58.028 41.667 0.00 0.00 0.00 3.14
315 316 3.850122 TCTAATCAGGACGGATATGCG 57.150 47.619 15.63 15.63 0.00 4.73
316 317 3.418047 TCTAATCAGGACGGATATGCGA 58.582 45.455 24.12 0.00 0.00 5.10
317 318 3.824443 TCTAATCAGGACGGATATGCGAA 59.176 43.478 24.12 3.53 0.00 4.70
318 319 3.469008 AATCAGGACGGATATGCGAAA 57.531 42.857 24.12 3.87 0.00 3.46
319 320 3.685139 ATCAGGACGGATATGCGAAAT 57.315 42.857 24.12 0.00 0.00 2.17
320 321 2.754472 TCAGGACGGATATGCGAAATG 58.246 47.619 24.12 16.43 0.00 2.32
321 322 1.800586 CAGGACGGATATGCGAAATGG 59.199 52.381 24.12 4.82 0.00 3.16
322 323 1.691976 AGGACGGATATGCGAAATGGA 59.308 47.619 24.12 0.00 0.00 3.41
323 324 2.303022 AGGACGGATATGCGAAATGGAT 59.697 45.455 24.12 0.00 0.00 3.41
324 325 2.673368 GGACGGATATGCGAAATGGATC 59.327 50.000 24.12 8.04 0.00 3.36
325 326 2.673368 GACGGATATGCGAAATGGATCC 59.327 50.000 24.12 4.20 33.99 3.36
326 327 2.009774 CGGATATGCGAAATGGATCCC 58.990 52.381 11.65 0.00 33.81 3.85
327 328 2.009774 GGATATGCGAAATGGATCCCG 58.990 52.381 9.90 6.52 31.57 5.14
328 329 1.398390 GATATGCGAAATGGATCCCGC 59.602 52.381 21.73 21.73 46.82 6.13
330 331 3.508474 GCGAAATGGATCCCGCAA 58.492 55.556 23.05 0.07 46.04 4.85
331 332 2.032981 GCGAAATGGATCCCGCAAT 58.967 52.632 23.05 2.57 46.04 3.56
332 333 0.385390 GCGAAATGGATCCCGCAATT 59.615 50.000 23.05 8.45 46.04 2.32
333 334 1.600413 GCGAAATGGATCCCGCAATTC 60.600 52.381 23.05 12.85 46.04 2.17
334 335 1.334059 CGAAATGGATCCCGCAATTCG 60.334 52.381 9.90 13.45 38.08 3.34
344 345 2.958576 GCAATTCGGTTTGCGGGA 59.041 55.556 7.34 0.00 42.22 5.14
345 346 1.510844 GCAATTCGGTTTGCGGGAT 59.489 52.632 7.34 0.00 42.22 3.85
346 347 0.525455 GCAATTCGGTTTGCGGGATC 60.525 55.000 7.34 0.00 42.22 3.36
347 348 1.094785 CAATTCGGTTTGCGGGATCT 58.905 50.000 0.00 0.00 0.00 2.75
348 349 2.285083 CAATTCGGTTTGCGGGATCTA 58.715 47.619 0.00 0.00 0.00 1.98
349 350 1.949465 ATTCGGTTTGCGGGATCTAC 58.051 50.000 0.00 0.00 0.00 2.59
350 351 0.899720 TTCGGTTTGCGGGATCTACT 59.100 50.000 0.00 0.00 0.00 2.57
351 352 1.766494 TCGGTTTGCGGGATCTACTA 58.234 50.000 0.00 0.00 0.00 1.82
352 353 1.679680 TCGGTTTGCGGGATCTACTAG 59.320 52.381 0.00 0.00 0.00 2.57
353 354 1.679680 CGGTTTGCGGGATCTACTAGA 59.320 52.381 0.00 0.00 0.00 2.43
354 355 2.287668 CGGTTTGCGGGATCTACTAGAG 60.288 54.545 0.00 0.00 0.00 2.43
355 356 2.957006 GGTTTGCGGGATCTACTAGAGA 59.043 50.000 0.00 0.00 39.01 3.10
357 358 4.039366 GGTTTGCGGGATCTACTAGAGATT 59.961 45.833 0.00 0.00 45.48 2.40
358 359 5.243283 GGTTTGCGGGATCTACTAGAGATTA 59.757 44.000 0.00 0.00 45.48 1.75
359 360 6.383415 GTTTGCGGGATCTACTAGAGATTAG 58.617 44.000 0.00 0.00 45.48 1.73
360 361 4.011023 TGCGGGATCTACTAGAGATTAGC 58.989 47.826 0.00 8.16 45.48 3.09
361 362 4.011023 GCGGGATCTACTAGAGATTAGCA 58.989 47.826 0.00 0.00 45.48 3.49
362 363 4.642885 GCGGGATCTACTAGAGATTAGCAT 59.357 45.833 0.00 0.00 45.48 3.79
363 364 5.126384 GCGGGATCTACTAGAGATTAGCATT 59.874 44.000 0.00 0.00 45.48 3.56
364 365 6.350612 GCGGGATCTACTAGAGATTAGCATTT 60.351 42.308 0.00 0.00 45.48 2.32
365 366 7.032580 CGGGATCTACTAGAGATTAGCATTTG 58.967 42.308 0.00 0.00 45.48 2.32
366 367 7.327214 GGGATCTACTAGAGATTAGCATTTGG 58.673 42.308 0.00 0.00 45.48 3.28
367 368 7.327214 GGATCTACTAGAGATTAGCATTTGGG 58.673 42.308 0.00 0.00 45.48 4.12
368 369 7.179338 GGATCTACTAGAGATTAGCATTTGGGA 59.821 40.741 0.00 0.00 45.48 4.37
369 370 8.677870 ATCTACTAGAGATTAGCATTTGGGAT 57.322 34.615 0.00 0.00 42.70 3.85
370 371 7.901029 TCTACTAGAGATTAGCATTTGGGATG 58.099 38.462 0.00 0.00 0.00 3.51
371 372 5.312079 ACTAGAGATTAGCATTTGGGATGC 58.688 41.667 0.00 2.90 44.85 3.91
372 373 3.494332 AGAGATTAGCATTTGGGATGCC 58.506 45.455 7.33 0.00 45.59 4.40
373 374 3.139770 AGAGATTAGCATTTGGGATGCCT 59.860 43.478 4.35 0.00 45.59 4.75
374 375 3.893813 GAGATTAGCATTTGGGATGCCTT 59.106 43.478 4.35 0.00 45.59 4.35
375 376 4.292643 AGATTAGCATTTGGGATGCCTTT 58.707 39.130 4.35 0.00 45.59 3.11
376 377 3.891422 TTAGCATTTGGGATGCCTTTG 57.109 42.857 4.35 0.50 45.59 2.77
377 378 0.906775 AGCATTTGGGATGCCTTTGG 59.093 50.000 4.35 0.00 45.59 3.28
378 379 0.107557 GCATTTGGGATGCCTTTGGG 60.108 55.000 4.35 0.00 39.01 4.12
389 390 3.644861 CCTTTGGGCTTACGGAACT 57.355 52.632 0.00 0.00 0.00 3.01
390 391 2.773993 CCTTTGGGCTTACGGAACTA 57.226 50.000 0.00 0.00 0.00 2.24
391 392 2.353323 CCTTTGGGCTTACGGAACTAC 58.647 52.381 0.00 0.00 0.00 2.73
392 393 2.027469 CCTTTGGGCTTACGGAACTACT 60.027 50.000 0.00 0.00 0.00 2.57
393 394 2.754946 TTGGGCTTACGGAACTACTG 57.245 50.000 0.00 0.00 0.00 2.74
394 395 0.248289 TGGGCTTACGGAACTACTGC 59.752 55.000 0.00 0.00 0.00 4.40
395 396 0.804933 GGGCTTACGGAACTACTGCG 60.805 60.000 0.00 0.00 45.77 5.18
401 402 2.633639 CGGAACTACTGCGTGTACG 58.366 57.895 0.00 0.00 43.27 3.67
402 403 0.166597 CGGAACTACTGCGTGTACGA 59.833 55.000 8.82 0.00 43.02 3.43
403 404 1.202110 CGGAACTACTGCGTGTACGAT 60.202 52.381 8.82 0.00 43.02 3.73
404 405 2.448219 GGAACTACTGCGTGTACGATC 58.552 52.381 8.82 0.00 43.02 3.69
405 406 2.097142 GGAACTACTGCGTGTACGATCT 59.903 50.000 8.82 0.00 43.02 2.75
406 407 3.427233 GGAACTACTGCGTGTACGATCTT 60.427 47.826 8.82 0.00 43.02 2.40
407 408 4.201851 GGAACTACTGCGTGTACGATCTTA 60.202 45.833 8.82 0.00 43.02 2.10
408 409 5.496133 AACTACTGCGTGTACGATCTTAT 57.504 39.130 8.82 0.00 43.02 1.73
409 410 5.496133 ACTACTGCGTGTACGATCTTATT 57.504 39.130 8.82 0.00 43.02 1.40
410 411 5.508872 ACTACTGCGTGTACGATCTTATTC 58.491 41.667 8.82 0.00 43.02 1.75
411 412 4.634184 ACTGCGTGTACGATCTTATTCT 57.366 40.909 8.82 0.00 43.02 2.40
412 413 4.352039 ACTGCGTGTACGATCTTATTCTG 58.648 43.478 8.82 0.00 43.02 3.02
413 414 4.142447 ACTGCGTGTACGATCTTATTCTGT 60.142 41.667 8.82 0.00 43.02 3.41
414 415 4.348656 TGCGTGTACGATCTTATTCTGTC 58.651 43.478 8.82 0.00 43.02 3.51
415 416 3.729716 GCGTGTACGATCTTATTCTGTCC 59.270 47.826 8.82 0.00 43.02 4.02
416 417 3.966844 CGTGTACGATCTTATTCTGTCCG 59.033 47.826 0.00 0.00 43.02 4.79
417 418 4.260497 CGTGTACGATCTTATTCTGTCCGA 60.260 45.833 0.00 0.00 43.02 4.55
418 419 4.968788 GTGTACGATCTTATTCTGTCCGAC 59.031 45.833 0.00 0.00 0.00 4.79
419 420 4.880120 TGTACGATCTTATTCTGTCCGACT 59.120 41.667 0.00 0.00 0.00 4.18
420 421 4.555348 ACGATCTTATTCTGTCCGACTC 57.445 45.455 0.00 0.00 0.00 3.36
421 422 4.200874 ACGATCTTATTCTGTCCGACTCT 58.799 43.478 0.00 0.00 0.00 3.24
422 423 5.366460 ACGATCTTATTCTGTCCGACTCTA 58.634 41.667 0.00 0.00 0.00 2.43
423 424 5.998981 ACGATCTTATTCTGTCCGACTCTAT 59.001 40.000 0.00 0.00 0.00 1.98
424 425 7.160049 ACGATCTTATTCTGTCCGACTCTATA 58.840 38.462 0.00 0.00 0.00 1.31
425 426 7.118101 ACGATCTTATTCTGTCCGACTCTATAC 59.882 40.741 0.00 0.00 0.00 1.47
426 427 6.782298 TCTTATTCTGTCCGACTCTATACG 57.218 41.667 0.00 0.00 0.00 3.06
427 428 6.519382 TCTTATTCTGTCCGACTCTATACGA 58.481 40.000 0.00 0.00 0.00 3.43
428 429 7.160049 TCTTATTCTGTCCGACTCTATACGAT 58.840 38.462 0.00 0.00 0.00 3.73
429 430 5.614923 ATTCTGTCCGACTCTATACGATG 57.385 43.478 0.00 0.00 0.00 3.84
430 431 2.806818 TCTGTCCGACTCTATACGATGC 59.193 50.000 0.00 0.00 0.00 3.91
431 432 1.878088 TGTCCGACTCTATACGATGCC 59.122 52.381 0.00 0.00 0.00 4.40
432 433 2.152830 GTCCGACTCTATACGATGCCT 58.847 52.381 0.00 0.00 0.00 4.75
433 434 3.244318 TGTCCGACTCTATACGATGCCTA 60.244 47.826 0.00 0.00 0.00 3.93
434 435 3.371591 GTCCGACTCTATACGATGCCTAG 59.628 52.174 0.00 0.00 0.00 3.02
435 436 3.007723 TCCGACTCTATACGATGCCTAGT 59.992 47.826 0.00 0.00 0.00 2.57
436 437 3.371591 CCGACTCTATACGATGCCTAGTC 59.628 52.174 0.00 0.00 0.00 2.59
437 438 4.247258 CGACTCTATACGATGCCTAGTCT 58.753 47.826 0.00 0.00 31.81 3.24
438 439 5.409211 CGACTCTATACGATGCCTAGTCTA 58.591 45.833 0.00 0.00 31.81 2.59
439 440 5.517411 CGACTCTATACGATGCCTAGTCTAG 59.483 48.000 0.00 0.00 31.81 2.43
440 441 6.363167 ACTCTATACGATGCCTAGTCTAGT 57.637 41.667 6.15 0.00 0.00 2.57
441 442 6.167685 ACTCTATACGATGCCTAGTCTAGTG 58.832 44.000 6.15 0.00 0.00 2.74
442 443 5.489249 TCTATACGATGCCTAGTCTAGTGG 58.511 45.833 6.15 0.00 0.00 4.00
443 444 2.438800 ACGATGCCTAGTCTAGTGGT 57.561 50.000 6.15 0.00 0.00 4.16
444 445 2.025155 ACGATGCCTAGTCTAGTGGTG 58.975 52.381 6.15 0.00 0.00 4.17
445 446 2.025155 CGATGCCTAGTCTAGTGGTGT 58.975 52.381 6.15 0.00 0.00 4.16
446 447 2.223595 CGATGCCTAGTCTAGTGGTGTG 60.224 54.545 6.15 0.00 0.00 3.82
447 448 0.895530 TGCCTAGTCTAGTGGTGTGC 59.104 55.000 6.15 1.97 0.00 4.57
448 449 1.187087 GCCTAGTCTAGTGGTGTGCT 58.813 55.000 6.15 0.00 0.00 4.40
449 450 1.134965 GCCTAGTCTAGTGGTGTGCTG 60.135 57.143 6.15 0.00 0.00 4.41
450 451 1.134965 CCTAGTCTAGTGGTGTGCTGC 60.135 57.143 6.15 0.00 0.00 5.25
451 452 0.895530 TAGTCTAGTGGTGTGCTGCC 59.104 55.000 0.00 0.00 0.00 4.85
452 453 1.121407 AGTCTAGTGGTGTGCTGCCA 61.121 55.000 0.00 0.00 0.00 4.92
453 454 0.036010 GTCTAGTGGTGTGCTGCCAT 60.036 55.000 0.00 0.00 38.40 4.40
454 455 0.692476 TCTAGTGGTGTGCTGCCATT 59.308 50.000 0.00 0.00 38.40 3.16
455 456 1.073763 TCTAGTGGTGTGCTGCCATTT 59.926 47.619 0.00 0.00 38.40 2.32
456 457 1.200716 CTAGTGGTGTGCTGCCATTTG 59.799 52.381 0.00 0.00 38.40 2.32
457 458 1.005867 GTGGTGTGCTGCCATTTGG 60.006 57.895 0.00 0.00 38.40 3.28
458 459 1.152589 TGGTGTGCTGCCATTTGGA 60.153 52.632 0.00 0.00 37.39 3.53
459 460 0.542467 TGGTGTGCTGCCATTTGGAT 60.542 50.000 0.00 0.00 37.39 3.41
460 461 0.174162 GGTGTGCTGCCATTTGGATC 59.826 55.000 0.00 0.00 37.39 3.36
461 462 0.889994 GTGTGCTGCCATTTGGATCA 59.110 50.000 0.00 0.00 37.39 2.92
462 463 1.135199 GTGTGCTGCCATTTGGATCAG 60.135 52.381 0.00 0.47 37.39 2.90
463 464 0.458669 GTGCTGCCATTTGGATCAGG 59.541 55.000 0.00 0.00 37.39 3.86
464 465 0.332293 TGCTGCCATTTGGATCAGGA 59.668 50.000 0.00 0.00 37.39 3.86
465 466 1.030457 GCTGCCATTTGGATCAGGAG 58.970 55.000 0.00 0.00 37.39 3.69
466 467 1.684248 GCTGCCATTTGGATCAGGAGT 60.684 52.381 0.00 0.00 37.39 3.85
467 468 2.731572 CTGCCATTTGGATCAGGAGTT 58.268 47.619 0.00 0.00 37.39 3.01
468 469 3.889815 CTGCCATTTGGATCAGGAGTTA 58.110 45.455 0.00 0.00 37.39 2.24
469 470 4.272489 CTGCCATTTGGATCAGGAGTTAA 58.728 43.478 0.00 0.00 37.39 2.01
470 471 4.671831 TGCCATTTGGATCAGGAGTTAAA 58.328 39.130 0.00 0.00 37.39 1.52
471 472 4.462483 TGCCATTTGGATCAGGAGTTAAAC 59.538 41.667 0.00 0.00 37.39 2.01
472 473 4.438744 GCCATTTGGATCAGGAGTTAAACG 60.439 45.833 0.00 0.00 37.39 3.60
473 474 4.096382 CCATTTGGATCAGGAGTTAAACGG 59.904 45.833 0.00 0.00 37.39 4.44
474 475 2.396590 TGGATCAGGAGTTAAACGGC 57.603 50.000 0.00 0.00 0.00 5.68
475 476 1.906574 TGGATCAGGAGTTAAACGGCT 59.093 47.619 0.00 0.00 0.00 5.52
476 477 2.304761 TGGATCAGGAGTTAAACGGCTT 59.695 45.455 0.00 0.00 0.00 4.35
477 478 2.678336 GGATCAGGAGTTAAACGGCTTG 59.322 50.000 0.00 0.00 0.00 4.01
478 479 3.596214 GATCAGGAGTTAAACGGCTTGA 58.404 45.455 0.00 0.00 0.00 3.02
479 480 3.695830 TCAGGAGTTAAACGGCTTGAT 57.304 42.857 0.00 0.00 0.00 2.57
480 481 3.596214 TCAGGAGTTAAACGGCTTGATC 58.404 45.455 0.00 0.00 0.00 2.92
481 482 3.260884 TCAGGAGTTAAACGGCTTGATCT 59.739 43.478 0.00 0.00 0.00 2.75
482 483 3.372206 CAGGAGTTAAACGGCTTGATCTG 59.628 47.826 0.00 0.00 0.00 2.90
483 484 2.096013 GGAGTTAAACGGCTTGATCTGC 59.904 50.000 0.00 0.00 0.00 4.26
484 485 3.003480 GAGTTAAACGGCTTGATCTGCT 58.997 45.455 10.22 0.00 0.00 4.24
485 486 4.181578 GAGTTAAACGGCTTGATCTGCTA 58.818 43.478 10.22 0.00 0.00 3.49
486 487 4.770795 AGTTAAACGGCTTGATCTGCTAT 58.229 39.130 10.22 0.00 0.00 2.97
487 488 4.572389 AGTTAAACGGCTTGATCTGCTATG 59.428 41.667 10.22 4.91 0.00 2.23
488 489 2.698855 AACGGCTTGATCTGCTATGT 57.301 45.000 10.22 5.39 0.00 2.29
489 490 2.231215 ACGGCTTGATCTGCTATGTC 57.769 50.000 10.22 0.00 0.00 3.06
490 491 1.135046 CGGCTTGATCTGCTATGTCG 58.865 55.000 10.22 3.05 0.00 4.35
491 492 1.536922 CGGCTTGATCTGCTATGTCGT 60.537 52.381 10.22 0.00 0.00 4.34
492 493 2.287608 CGGCTTGATCTGCTATGTCGTA 60.288 50.000 10.22 0.00 0.00 3.43
493 494 3.612717 CGGCTTGATCTGCTATGTCGTAT 60.613 47.826 10.22 0.00 0.00 3.06
494 495 3.677121 GGCTTGATCTGCTATGTCGTATG 59.323 47.826 10.22 0.00 0.00 2.39
495 496 4.550422 GCTTGATCTGCTATGTCGTATGA 58.450 43.478 0.00 0.00 0.00 2.15
496 497 4.984785 GCTTGATCTGCTATGTCGTATGAA 59.015 41.667 0.00 0.00 0.00 2.57
497 498 5.463392 GCTTGATCTGCTATGTCGTATGAAA 59.537 40.000 0.00 0.00 0.00 2.69
498 499 6.146837 GCTTGATCTGCTATGTCGTATGAAAT 59.853 38.462 0.00 0.00 0.00 2.17
499 500 7.621013 GCTTGATCTGCTATGTCGTATGAAATC 60.621 40.741 0.00 0.00 0.00 2.17
500 501 5.858581 TGATCTGCTATGTCGTATGAAATCG 59.141 40.000 0.00 0.00 0.00 3.34
501 502 4.546570 TCTGCTATGTCGTATGAAATCGG 58.453 43.478 0.00 0.00 0.00 4.18
502 503 4.277423 TCTGCTATGTCGTATGAAATCGGA 59.723 41.667 0.00 0.00 0.00 4.55
503 504 4.295870 TGCTATGTCGTATGAAATCGGAC 58.704 43.478 0.00 0.00 31.53 4.79
504 505 4.202070 TGCTATGTCGTATGAAATCGGACA 60.202 41.667 0.00 0.00 41.07 4.02
505 506 4.743151 GCTATGTCGTATGAAATCGGACAA 59.257 41.667 0.00 0.00 40.49 3.18
506 507 5.107837 GCTATGTCGTATGAAATCGGACAAG 60.108 44.000 0.00 0.00 40.49 3.16
507 508 2.927477 TGTCGTATGAAATCGGACAAGC 59.073 45.455 0.00 0.00 36.23 4.01
508 509 2.927477 GTCGTATGAAATCGGACAAGCA 59.073 45.455 0.00 0.00 31.31 3.91
509 510 3.369756 GTCGTATGAAATCGGACAAGCAA 59.630 43.478 0.00 0.00 31.31 3.91
510 511 3.616821 TCGTATGAAATCGGACAAGCAAG 59.383 43.478 0.00 0.00 0.00 4.01
511 512 3.616821 CGTATGAAATCGGACAAGCAAGA 59.383 43.478 0.00 0.00 0.00 3.02
512 513 4.259970 CGTATGAAATCGGACAAGCAAGAG 60.260 45.833 0.00 0.00 0.00 2.85
513 514 3.126001 TGAAATCGGACAAGCAAGAGT 57.874 42.857 0.00 0.00 0.00 3.24
514 515 3.067106 TGAAATCGGACAAGCAAGAGTC 58.933 45.455 0.00 0.00 0.00 3.36
515 516 1.714794 AATCGGACAAGCAAGAGTCG 58.285 50.000 0.00 0.00 35.63 4.18
516 517 0.603569 ATCGGACAAGCAAGAGTCGT 59.396 50.000 0.00 0.00 35.63 4.34
517 518 1.241165 TCGGACAAGCAAGAGTCGTA 58.759 50.000 0.00 0.00 35.63 3.43
518 519 1.068748 TCGGACAAGCAAGAGTCGTAC 60.069 52.381 0.00 0.00 35.63 3.67
519 520 1.337821 GGACAAGCAAGAGTCGTACG 58.662 55.000 9.53 9.53 35.63 3.67
520 521 0.708918 GACAAGCAAGAGTCGTACGC 59.291 55.000 11.24 5.97 0.00 4.42
521 522 0.031585 ACAAGCAAGAGTCGTACGCA 59.968 50.000 11.24 0.00 0.00 5.24
522 523 1.336887 ACAAGCAAGAGTCGTACGCAT 60.337 47.619 11.24 0.25 0.00 4.73
523 524 2.094906 ACAAGCAAGAGTCGTACGCATA 60.095 45.455 11.24 0.00 0.00 3.14
524 525 2.476873 AGCAAGAGTCGTACGCATAG 57.523 50.000 11.24 0.00 0.00 2.23
525 526 0.847035 GCAAGAGTCGTACGCATAGC 59.153 55.000 11.24 5.97 0.00 2.97
526 527 1.797713 GCAAGAGTCGTACGCATAGCA 60.798 52.381 11.24 0.00 0.00 3.49
527 528 2.526077 CAAGAGTCGTACGCATAGCAA 58.474 47.619 11.24 0.00 0.00 3.91
528 529 2.476873 AGAGTCGTACGCATAGCAAG 57.523 50.000 11.24 0.00 0.00 4.01
529 530 2.014857 AGAGTCGTACGCATAGCAAGA 58.985 47.619 11.24 0.00 0.00 3.02
530 531 2.110226 GAGTCGTACGCATAGCAAGAC 58.890 52.381 11.24 0.00 0.00 3.01
531 532 1.743958 AGTCGTACGCATAGCAAGACT 59.256 47.619 11.24 2.30 33.27 3.24
532 533 2.110226 GTCGTACGCATAGCAAGACTC 58.890 52.381 11.24 0.00 0.00 3.36
533 534 2.014857 TCGTACGCATAGCAAGACTCT 58.985 47.619 11.24 0.00 0.00 3.24
534 535 2.422479 TCGTACGCATAGCAAGACTCTT 59.578 45.455 11.24 0.00 0.00 2.85
558 559 3.014623 GCTTAACCCCCACAAGTGTATC 58.985 50.000 0.00 0.00 0.00 2.24
609 612 1.160870 ATCTGTCCACCCACCCTCA 59.839 57.895 0.00 0.00 0.00 3.86
610 613 0.253347 ATCTGTCCACCCACCCTCAT 60.253 55.000 0.00 0.00 0.00 2.90
611 614 0.415830 TCTGTCCACCCACCCTCATA 59.584 55.000 0.00 0.00 0.00 2.15
612 615 1.009552 TCTGTCCACCCACCCTCATAT 59.990 52.381 0.00 0.00 0.00 1.78
613 616 1.417890 CTGTCCACCCACCCTCATATC 59.582 57.143 0.00 0.00 0.00 1.63
614 617 1.274126 TGTCCACCCACCCTCATATCA 60.274 52.381 0.00 0.00 0.00 2.15
615 618 1.141053 GTCCACCCACCCTCATATCAC 59.859 57.143 0.00 0.00 0.00 3.06
616 619 1.212375 CCACCCACCCTCATATCACA 58.788 55.000 0.00 0.00 0.00 3.58
617 620 1.134098 CCACCCACCCTCATATCACAC 60.134 57.143 0.00 0.00 0.00 3.82
618 621 1.134098 CACCCACCCTCATATCACACC 60.134 57.143 0.00 0.00 0.00 4.16
619 622 1.212375 CCCACCCTCATATCACACCA 58.788 55.000 0.00 0.00 0.00 4.17
652 655 0.250234 TCGCAAACCCCTCTCATCTG 59.750 55.000 0.00 0.00 0.00 2.90
669 672 2.060004 CTGCTCGCAATCCATGGCAG 62.060 60.000 6.96 4.31 40.52 4.85
695 698 2.754002 GCTACGGAGAACTTAGTGAGGT 59.246 50.000 0.00 0.00 0.00 3.85
761 764 3.246112 TGCCTTGGCCAGGTACGT 61.246 61.111 14.60 0.00 46.07 3.57
785 788 1.880941 GGTCCCCTTCAGGTACTCAT 58.119 55.000 0.00 0.00 34.60 2.90
886 898 9.742552 CTTTCGTTATCAGCTAGTTTAAACTTC 57.257 33.333 25.07 16.78 40.37 3.01
898 910 7.381408 GCTAGTTTAAACTTCAAACCAATGGAC 59.619 37.037 25.07 0.00 40.37 4.02
973 986 5.043248 AGTCAGCAAAATTTACTTGTGTGC 58.957 37.500 0.00 0.00 0.00 4.57
974 987 5.043248 GTCAGCAAAATTTACTTGTGTGCT 58.957 37.500 5.63 5.63 41.33 4.40
976 989 5.009854 AGCAAAATTTACTTGTGTGCTGT 57.990 34.783 9.81 0.00 39.29 4.40
1203 1220 1.664965 GAAGGTGTGCTCGCTCGTT 60.665 57.895 0.00 0.00 0.00 3.85
1221 1238 5.006261 GCTCGTTGGCAAGTTTAACAAATTT 59.994 36.000 0.00 0.00 0.00 1.82
1296 1313 4.121317 TGCTGGCAAAGTTGAATTTGAAG 58.879 39.130 7.97 5.66 41.71 3.02
1458 1475 2.574955 AACCGAGCCGTCTGAAGCT 61.575 57.895 3.32 3.32 43.55 3.74
1500 1517 3.439857 TCTGCCTATTTGAGCAAAGGT 57.560 42.857 1.92 0.00 38.82 3.50
1553 1570 4.344390 TCTCCTGAGAGATGACATCAATGG 59.656 45.833 17.57 11.18 44.42 3.16
1632 1649 1.300963 GCACCTCTTGGCTCCATCA 59.699 57.895 0.00 0.00 36.63 3.07
2132 2149 5.243283 ACAGAATAGTGTTCGGTTCAGTAGT 59.757 40.000 0.00 0.00 0.00 2.73
2236 2254 1.550327 TGCTACTCCAGAGTCCACTG 58.450 55.000 3.00 0.00 42.54 3.66
2237 2255 1.203063 TGCTACTCCAGAGTCCACTGT 60.203 52.381 3.00 0.00 42.54 3.55
2460 2478 7.294676 TGTGATTTCTTCATGTTACATCGAG 57.705 36.000 0.00 0.00 36.54 4.04
2464 2482 7.387673 TGATTTCTTCATGTTACATCGAGTTGT 59.612 33.333 0.00 0.00 0.00 3.32
2486 2506 5.700832 TGTGCTCCTTCTGTTTATGTAACTG 59.299 40.000 0.00 0.00 37.64 3.16
2497 2517 8.717821 TCTGTTTATGTAACTGATAGTGCAAAC 58.282 33.333 0.00 0.00 39.07 2.93
2636 2656 8.378115 AGCTTCTTGGCTATATATCTGAGAAT 57.622 34.615 0.00 0.00 41.16 2.40
2684 2704 4.312443 GAACCGATTGTTTACTGAGGTCA 58.688 43.478 0.00 0.00 37.29 4.02
2749 2769 1.851267 GGTTTCCACCCCCTCTTGT 59.149 57.895 0.00 0.00 37.03 3.16
2750 2770 0.539669 GGTTTCCACCCCCTCTTGTG 60.540 60.000 0.00 0.00 37.03 3.33
2983 6695 2.271800 GTTGAGACAACATAGGCGGAG 58.728 52.381 9.32 0.00 0.00 4.63
2984 6696 1.557099 TGAGACAACATAGGCGGAGT 58.443 50.000 0.00 0.00 0.00 3.85
2985 6697 1.899814 TGAGACAACATAGGCGGAGTT 59.100 47.619 0.00 0.00 0.00 3.01
2986 6698 2.094182 TGAGACAACATAGGCGGAGTTC 60.094 50.000 0.00 0.00 0.00 3.01
2987 6699 1.207329 AGACAACATAGGCGGAGTTCC 59.793 52.381 0.00 0.00 0.00 3.62
2988 6700 1.207329 GACAACATAGGCGGAGTTCCT 59.793 52.381 0.00 0.00 37.72 3.36
2989 6701 1.207329 ACAACATAGGCGGAGTTCCTC 59.793 52.381 0.00 0.00 35.21 3.71
2990 6702 1.482593 CAACATAGGCGGAGTTCCTCT 59.517 52.381 0.00 0.00 35.21 3.69
2991 6703 1.867363 ACATAGGCGGAGTTCCTCTT 58.133 50.000 0.00 0.00 35.21 2.85
2992 6704 1.482593 ACATAGGCGGAGTTCCTCTTG 59.517 52.381 0.00 0.00 35.21 3.02
2993 6705 1.482593 CATAGGCGGAGTTCCTCTTGT 59.517 52.381 0.00 0.00 35.21 3.16
2994 6706 0.895530 TAGGCGGAGTTCCTCTTGTG 59.104 55.000 0.00 0.00 35.21 3.33
3034 6746 2.325583 TGCTTCTCAAGGAAACACGT 57.674 45.000 0.00 0.00 33.07 4.49
3041 6753 2.028130 TCAAGGAAACACGTTTGGCAT 58.972 42.857 0.00 0.00 32.11 4.40
3528 7240 2.697751 CTGGAGCAGGTAGAGCTTGTAT 59.302 50.000 0.00 0.00 43.58 2.29
3531 7243 3.006003 GGAGCAGGTAGAGCTTGTATACC 59.994 52.174 0.00 9.26 43.58 2.73
3663 7375 1.358152 AGAAGATCCGGGTGAACCAA 58.642 50.000 0.00 0.00 40.22 3.67
3665 7377 0.321298 AAGATCCGGGTGAACCAACG 60.321 55.000 0.00 0.00 40.22 4.10
3727 7439 2.976882 TCAACTAACAACAGCCTACCCT 59.023 45.455 0.00 0.00 0.00 4.34
3765 7477 3.650950 ATCAACCTGGCCGCACCT 61.651 61.111 0.00 0.00 40.22 4.00
3780 7492 1.208052 GCACCTTAGTCCAGATGAGCA 59.792 52.381 0.00 0.00 0.00 4.26
3793 7505 5.889853 TCCAGATGAGCATCTTTATTTTGCT 59.110 36.000 10.15 0.00 45.31 3.91
3897 7609 4.899352 AGTGTCTTAGGCTTTCATCACT 57.101 40.909 0.00 0.00 0.00 3.41
3940 7653 2.932614 CTCTGATTGTTCACGGCTTAGG 59.067 50.000 0.00 0.00 0.00 2.69
4127 7840 3.443681 CACAACACCTCTCCACAAGTTTT 59.556 43.478 0.00 0.00 0.00 2.43
4172 7885 6.476378 AGGCTTATTCTGTGTTCACTAATGT 58.524 36.000 4.59 0.00 0.00 2.71
4173 7886 7.620880 AGGCTTATTCTGTGTTCACTAATGTA 58.379 34.615 4.59 0.00 0.00 2.29
4174 7887 7.549488 AGGCTTATTCTGTGTTCACTAATGTAC 59.451 37.037 4.59 0.00 0.00 2.90
4175 7888 7.549488 GGCTTATTCTGTGTTCACTAATGTACT 59.451 37.037 4.59 0.00 0.00 2.73
4194 7907 9.905713 AATGTACTTACTGTCCATTATCATTGT 57.094 29.630 0.00 0.00 34.17 2.71
4233 7946 0.391597 TCGGTCTCAACACCTCCAAC 59.608 55.000 0.00 0.00 33.77 3.77
4234 7947 0.393077 CGGTCTCAACACCTCCAACT 59.607 55.000 0.00 0.00 33.77 3.16
4235 7948 1.605712 CGGTCTCAACACCTCCAACTC 60.606 57.143 0.00 0.00 33.77 3.01
4236 7949 1.270893 GGTCTCAACACCTCCAACTCC 60.271 57.143 0.00 0.00 33.08 3.85
4237 7950 1.416401 GTCTCAACACCTCCAACTCCA 59.584 52.381 0.00 0.00 0.00 3.86
4238 7951 2.123589 TCTCAACACCTCCAACTCCAA 58.876 47.619 0.00 0.00 0.00 3.53
4246 7959 2.230660 CCTCCAACTCCAAACCAAGTC 58.769 52.381 0.00 0.00 0.00 3.01
4326 8039 9.841295 GTGGGAGTTGGTATCTACATTATTTTA 57.159 33.333 0.00 0.00 0.00 1.52
4392 8106 4.459337 GCCCATTAGGTATAAATCAGCACC 59.541 45.833 0.00 0.00 38.26 5.01
4393 8107 5.010282 CCCATTAGGTATAAATCAGCACCC 58.990 45.833 0.00 0.00 0.00 4.61
4394 8108 5.010282 CCATTAGGTATAAATCAGCACCCC 58.990 45.833 0.00 0.00 0.00 4.95
4395 8109 2.930826 AGGTATAAATCAGCACCCCG 57.069 50.000 0.00 0.00 0.00 5.73
4396 8110 1.202770 AGGTATAAATCAGCACCCCGC 60.203 52.381 0.00 0.00 42.91 6.13
4397 8111 1.476110 GGTATAAATCAGCACCCCGCA 60.476 52.381 0.00 0.00 46.13 5.69
4398 8112 2.294074 GTATAAATCAGCACCCCGCAA 58.706 47.619 0.00 0.00 46.13 4.85
4399 8113 1.846007 ATAAATCAGCACCCCGCAAA 58.154 45.000 0.00 0.00 46.13 3.68
4400 8114 1.621992 TAAATCAGCACCCCGCAAAA 58.378 45.000 0.00 0.00 46.13 2.44
4401 8115 0.755686 AAATCAGCACCCCGCAAAAA 59.244 45.000 0.00 0.00 46.13 1.94
4567 8282 5.128205 TGAATGTGGAAGAAGCCAGATATG 58.872 41.667 0.00 0.00 40.68 1.78
4570 8285 1.845791 TGGAAGAAGCCAGATATGCCA 59.154 47.619 0.00 0.00 33.10 4.92
4604 8319 2.093288 CAGAGCTCAACCTCAGGCATAA 60.093 50.000 17.77 0.00 34.26 1.90
4611 8326 5.123027 GCTCAACCTCAGGCATAATATAAGC 59.877 44.000 0.00 0.00 0.00 3.09
4638 8353 6.326375 CGGTGCTAATTATTTAACAAGGCAA 58.674 36.000 0.00 0.00 0.00 4.52
4651 8366 1.868498 CAAGGCAACAGTTTTGGCATG 59.132 47.619 16.83 11.63 46.01 4.06
4667 8382 1.730501 CATGATGACAGCAGAACCGT 58.269 50.000 0.00 0.00 0.00 4.83
4670 8385 1.071605 GATGACAGCAGAACCGTGAC 58.928 55.000 0.00 0.00 0.00 3.67
4674 8389 1.527311 GACAGCAGAACCGTGACTTTC 59.473 52.381 0.00 0.00 0.00 2.62
4719 8435 9.403110 CATATTATGCTTATTCCTTGTTCTTGC 57.597 33.333 0.00 0.00 0.00 4.01
4723 8439 5.321102 TGCTTATTCCTTGTTCTTGCCTTA 58.679 37.500 0.00 0.00 0.00 2.69
4743 8459 5.533903 CCTTAAGTTGGATCATCATTCTGGG 59.466 44.000 0.97 0.00 0.00 4.45
4763 8479 4.093291 AGCTCCTCGGCAGGCAAG 62.093 66.667 0.00 0.00 40.12 4.01
4764 8480 4.087892 GCTCCTCGGCAGGCAAGA 62.088 66.667 0.00 0.00 40.12 3.02
4765 8481 2.906458 CTCCTCGGCAGGCAAGAT 59.094 61.111 0.00 0.00 40.12 2.40
4766 8482 2.032860 GCTCCTCGGCAGGCAAGATA 62.033 60.000 0.00 0.00 40.12 1.98
4767 8483 0.465705 CTCCTCGGCAGGCAAGATAA 59.534 55.000 0.00 0.00 40.12 1.75
4768 8484 1.071385 CTCCTCGGCAGGCAAGATAAT 59.929 52.381 0.00 0.00 40.12 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.195334 AGTGCCATGGATCCGCCC 62.195 66.667 18.40 0.00 34.97 6.13
4 5 2.903855 CAGTGCCATGGATCCGCC 60.904 66.667 18.40 0.00 37.10 6.13
5 6 2.903855 CCAGTGCCATGGATCCGC 60.904 66.667 18.40 4.40 43.57 5.54
6 7 2.903855 GCCAGTGCCATGGATCCG 60.904 66.667 18.40 0.00 43.57 4.18
7 8 2.903855 CGCCAGTGCCATGGATCC 60.904 66.667 18.40 4.20 43.57 3.36
9 10 2.124570 GTCGCCAGTGCCATGGAT 60.125 61.111 18.40 0.00 43.57 3.41
10 11 4.758251 CGTCGCCAGTGCCATGGA 62.758 66.667 18.40 0.00 43.57 3.41
30 31 3.281751 CTTGTGTTCACCGCTCGCG 62.282 63.158 0.00 0.00 39.44 5.87
31 32 2.551270 CTTGTGTTCACCGCTCGC 59.449 61.111 0.37 0.00 0.00 5.03
32 33 2.243957 TGCTTGTGTTCACCGCTCG 61.244 57.895 12.72 0.00 0.00 5.03
33 34 1.279840 GTGCTTGTGTTCACCGCTC 59.720 57.895 12.72 7.71 0.00 5.03
34 35 2.186826 GGTGCTTGTGTTCACCGCT 61.187 57.895 12.72 0.00 42.67 5.52
35 36 2.331451 GGTGCTTGTGTTCACCGC 59.669 61.111 0.37 4.35 42.67 5.68
38 39 2.551912 CGGGGGTGCTTGTGTTCAC 61.552 63.158 0.00 0.00 0.00 3.18
39 40 2.203280 CGGGGGTGCTTGTGTTCA 60.203 61.111 0.00 0.00 0.00 3.18
40 41 1.966451 CTCGGGGGTGCTTGTGTTC 60.966 63.158 0.00 0.00 0.00 3.18
41 42 2.113139 CTCGGGGGTGCTTGTGTT 59.887 61.111 0.00 0.00 0.00 3.32
42 43 4.643387 GCTCGGGGGTGCTTGTGT 62.643 66.667 0.00 0.00 0.00 3.72
53 54 3.788766 CTCGTTTTGGCGCTCGGG 61.789 66.667 7.64 1.03 0.00 5.14
54 55 3.788766 CCTCGTTTTGGCGCTCGG 61.789 66.667 7.64 0.00 0.00 4.63
55 56 3.041940 ACCTCGTTTTGGCGCTCG 61.042 61.111 7.64 5.29 0.00 5.03
56 57 2.556287 CACCTCGTTTTGGCGCTC 59.444 61.111 7.64 0.00 0.00 5.03
57 58 2.951475 TTCCACCTCGTTTTGGCGCT 62.951 55.000 7.64 0.00 32.37 5.92
58 59 1.862602 ATTCCACCTCGTTTTGGCGC 61.863 55.000 0.00 0.00 32.37 6.53
59 60 0.109781 CATTCCACCTCGTTTTGGCG 60.110 55.000 0.00 0.00 32.37 5.69
60 61 1.243902 TCATTCCACCTCGTTTTGGC 58.756 50.000 0.00 0.00 32.37 4.52
61 62 2.415893 GCATCATTCCACCTCGTTTTGG 60.416 50.000 0.00 0.00 0.00 3.28
62 63 2.728846 CGCATCATTCCACCTCGTTTTG 60.729 50.000 0.00 0.00 0.00 2.44
63 64 1.468520 CGCATCATTCCACCTCGTTTT 59.531 47.619 0.00 0.00 0.00 2.43
64 65 1.086696 CGCATCATTCCACCTCGTTT 58.913 50.000 0.00 0.00 0.00 3.60
65 66 0.249120 TCGCATCATTCCACCTCGTT 59.751 50.000 0.00 0.00 0.00 3.85
66 67 0.460284 GTCGCATCATTCCACCTCGT 60.460 55.000 0.00 0.00 0.00 4.18
67 68 1.482621 CGTCGCATCATTCCACCTCG 61.483 60.000 0.00 0.00 0.00 4.63
68 69 1.766143 GCGTCGCATCATTCCACCTC 61.766 60.000 13.44 0.00 0.00 3.85
69 70 1.815421 GCGTCGCATCATTCCACCT 60.815 57.895 13.44 0.00 0.00 4.00
70 71 1.643868 TTGCGTCGCATCATTCCACC 61.644 55.000 22.41 0.00 38.76 4.61
71 72 0.167908 TTTGCGTCGCATCATTCCAC 59.832 50.000 22.41 0.00 38.76 4.02
72 73 0.447406 CTTTGCGTCGCATCATTCCA 59.553 50.000 22.41 0.19 38.76 3.53
73 74 0.863119 GCTTTGCGTCGCATCATTCC 60.863 55.000 22.41 3.08 38.76 3.01
74 75 2.559123 GCTTTGCGTCGCATCATTC 58.441 52.632 22.41 5.30 38.76 2.67
75 76 4.771684 GCTTTGCGTCGCATCATT 57.228 50.000 22.41 0.00 38.76 2.57
86 87 1.226407 GAAATCTCCGCCGCTTTGC 60.226 57.895 0.00 0.00 0.00 3.68
87 88 0.097674 CTGAAATCTCCGCCGCTTTG 59.902 55.000 0.00 0.00 0.00 2.77
88 89 1.026718 CCTGAAATCTCCGCCGCTTT 61.027 55.000 0.00 0.00 0.00 3.51
89 90 1.450312 CCTGAAATCTCCGCCGCTT 60.450 57.895 0.00 0.00 0.00 4.68
90 91 2.187946 CCTGAAATCTCCGCCGCT 59.812 61.111 0.00 0.00 0.00 5.52
91 92 3.577313 GCCTGAAATCTCCGCCGC 61.577 66.667 0.00 0.00 0.00 6.53
92 93 2.176273 CAGCCTGAAATCTCCGCCG 61.176 63.158 0.00 0.00 0.00 6.46
93 94 2.476320 GCAGCCTGAAATCTCCGCC 61.476 63.158 0.00 0.00 0.00 6.13
94 95 2.817423 CGCAGCCTGAAATCTCCGC 61.817 63.158 0.00 0.00 0.00 5.54
95 96 3.403277 CGCAGCCTGAAATCTCCG 58.597 61.111 0.00 0.00 0.00 4.63
113 114 4.473520 CTACCCGTGGCTGCCCTG 62.474 72.222 17.53 8.30 0.00 4.45
116 117 4.715523 TTGCTACCCGTGGCTGCC 62.716 66.667 12.87 12.87 37.97 4.85
117 118 3.431725 GTTGCTACCCGTGGCTGC 61.432 66.667 4.77 0.00 37.97 5.25
118 119 1.169661 TTTGTTGCTACCCGTGGCTG 61.170 55.000 4.77 0.00 37.97 4.85
119 120 0.889186 CTTTGTTGCTACCCGTGGCT 60.889 55.000 4.77 0.00 37.97 4.75
120 121 1.579429 CTTTGTTGCTACCCGTGGC 59.421 57.895 0.00 0.00 37.60 5.01
121 122 1.241315 CCCTTTGTTGCTACCCGTGG 61.241 60.000 0.00 0.00 0.00 4.94
122 123 1.241315 CCCCTTTGTTGCTACCCGTG 61.241 60.000 0.00 0.00 0.00 4.94
123 124 1.074248 CCCCTTTGTTGCTACCCGT 59.926 57.895 0.00 0.00 0.00 5.28
124 125 1.074248 ACCCCTTTGTTGCTACCCG 59.926 57.895 0.00 0.00 0.00 5.28
125 126 0.898326 CCACCCCTTTGTTGCTACCC 60.898 60.000 0.00 0.00 0.00 3.69
126 127 0.898326 CCCACCCCTTTGTTGCTACC 60.898 60.000 0.00 0.00 0.00 3.18
127 128 0.111639 TCCCACCCCTTTGTTGCTAC 59.888 55.000 0.00 0.00 0.00 3.58
128 129 0.854218 TTCCCACCCCTTTGTTGCTA 59.146 50.000 0.00 0.00 0.00 3.49
129 130 0.190815 ATTCCCACCCCTTTGTTGCT 59.809 50.000 0.00 0.00 0.00 3.91
130 131 1.055849 AATTCCCACCCCTTTGTTGC 58.944 50.000 0.00 0.00 0.00 4.17
131 132 2.810032 GCAAATTCCCACCCCTTTGTTG 60.810 50.000 0.00 0.00 32.51 3.33
132 133 1.419762 GCAAATTCCCACCCCTTTGTT 59.580 47.619 0.00 0.00 32.51 2.83
133 134 1.055849 GCAAATTCCCACCCCTTTGT 58.944 50.000 0.00 0.00 32.51 2.83
134 135 0.037419 CGCAAATTCCCACCCCTTTG 60.037 55.000 0.00 0.00 0.00 2.77
135 136 1.191489 CCGCAAATTCCCACCCCTTT 61.191 55.000 0.00 0.00 0.00 3.11
136 137 1.609210 CCGCAAATTCCCACCCCTT 60.609 57.895 0.00 0.00 0.00 3.95
137 138 2.037208 CCGCAAATTCCCACCCCT 59.963 61.111 0.00 0.00 0.00 4.79
138 139 3.770040 GCCGCAAATTCCCACCCC 61.770 66.667 0.00 0.00 0.00 4.95
139 140 4.128388 CGCCGCAAATTCCCACCC 62.128 66.667 0.00 0.00 0.00 4.61
140 141 4.128388 CCGCCGCAAATTCCCACC 62.128 66.667 0.00 0.00 0.00 4.61
141 142 4.794439 GCCGCCGCAAATTCCCAC 62.794 66.667 0.00 0.00 34.03 4.61
143 144 4.496927 CTGCCGCCGCAAATTCCC 62.497 66.667 0.47 0.00 46.66 3.97
144 145 4.496927 CCTGCCGCCGCAAATTCC 62.497 66.667 0.47 0.00 46.66 3.01
145 146 4.496927 CCCTGCCGCCGCAAATTC 62.497 66.667 0.47 0.00 46.66 2.17
152 153 3.905678 CTCTACTCCCTGCCGCCG 61.906 72.222 0.00 0.00 0.00 6.46
153 154 3.541713 CCTCTACTCCCTGCCGCC 61.542 72.222 0.00 0.00 0.00 6.13
154 155 4.228567 GCCTCTACTCCCTGCCGC 62.229 72.222 0.00 0.00 0.00 6.53
155 156 2.759973 TGCCTCTACTCCCTGCCG 60.760 66.667 0.00 0.00 0.00 5.69
156 157 3.100503 GCTGCCTCTACTCCCTGCC 62.101 68.421 0.00 0.00 0.00 4.85
157 158 2.503546 GCTGCCTCTACTCCCTGC 59.496 66.667 0.00 0.00 0.00 4.85
158 159 2.790791 CCGCTGCCTCTACTCCCTG 61.791 68.421 0.00 0.00 0.00 4.45
159 160 2.443016 CCGCTGCCTCTACTCCCT 60.443 66.667 0.00 0.00 0.00 4.20
160 161 2.022240 CTTCCGCTGCCTCTACTCCC 62.022 65.000 0.00 0.00 0.00 4.30
161 162 1.324005 ACTTCCGCTGCCTCTACTCC 61.324 60.000 0.00 0.00 0.00 3.85
162 163 0.179124 CACTTCCGCTGCCTCTACTC 60.179 60.000 0.00 0.00 0.00 2.59
163 164 0.612174 TCACTTCCGCTGCCTCTACT 60.612 55.000 0.00 0.00 0.00 2.57
164 165 0.179124 CTCACTTCCGCTGCCTCTAC 60.179 60.000 0.00 0.00 0.00 2.59
165 166 0.612174 ACTCACTTCCGCTGCCTCTA 60.612 55.000 0.00 0.00 0.00 2.43
166 167 1.476007 AACTCACTTCCGCTGCCTCT 61.476 55.000 0.00 0.00 0.00 3.69
167 168 0.603975 AAACTCACTTCCGCTGCCTC 60.604 55.000 0.00 0.00 0.00 4.70
168 169 0.886490 CAAACTCACTTCCGCTGCCT 60.886 55.000 0.00 0.00 0.00 4.75
169 170 1.576421 CAAACTCACTTCCGCTGCC 59.424 57.895 0.00 0.00 0.00 4.85
170 171 1.576421 CCAAACTCACTTCCGCTGC 59.424 57.895 0.00 0.00 0.00 5.25
171 172 1.576421 GCCAAACTCACTTCCGCTG 59.424 57.895 0.00 0.00 0.00 5.18
172 173 1.600916 GGCCAAACTCACTTCCGCT 60.601 57.895 0.00 0.00 0.00 5.52
173 174 1.452145 TTGGCCAAACTCACTTCCGC 61.452 55.000 17.98 0.00 0.00 5.54
174 175 0.310854 GTTGGCCAAACTCACTTCCG 59.689 55.000 22.47 0.00 35.75 4.30
175 176 1.338020 CTGTTGGCCAAACTCACTTCC 59.662 52.381 22.47 4.73 39.70 3.46
176 177 2.297701 TCTGTTGGCCAAACTCACTTC 58.702 47.619 22.47 5.55 39.70 3.01
177 178 2.435372 TCTGTTGGCCAAACTCACTT 57.565 45.000 22.47 0.00 39.70 3.16
178 179 2.664402 ATCTGTTGGCCAAACTCACT 57.336 45.000 22.47 0.00 39.70 3.41
179 180 2.749621 CCTATCTGTTGGCCAAACTCAC 59.250 50.000 22.47 8.91 39.70 3.51
180 181 2.290896 CCCTATCTGTTGGCCAAACTCA 60.291 50.000 22.47 13.56 39.70 3.41
181 182 2.369394 CCCTATCTGTTGGCCAAACTC 58.631 52.381 22.47 8.88 39.70 3.01
182 183 1.005924 CCCCTATCTGTTGGCCAAACT 59.994 52.381 22.47 7.65 39.70 2.66
183 184 1.474330 CCCCTATCTGTTGGCCAAAC 58.526 55.000 22.47 15.01 39.41 2.93
184 185 0.324275 GCCCCTATCTGTTGGCCAAA 60.324 55.000 22.47 5.00 37.94 3.28
185 186 1.306296 GCCCCTATCTGTTGGCCAA 59.694 57.895 16.05 16.05 37.94 4.52
186 187 3.006677 GCCCCTATCTGTTGGCCA 58.993 61.111 0.00 0.00 37.94 5.36
188 189 2.195956 GGGCCCCTATCTGTTGGC 59.804 66.667 12.23 0.00 43.26 4.52
189 190 2.070039 TCGGGCCCCTATCTGTTGG 61.070 63.158 18.66 0.00 0.00 3.77
190 191 1.146263 GTCGGGCCCCTATCTGTTG 59.854 63.158 18.66 0.00 0.00 3.33
191 192 0.912487 TTGTCGGGCCCCTATCTGTT 60.912 55.000 18.66 0.00 0.00 3.16
192 193 0.912487 TTTGTCGGGCCCCTATCTGT 60.912 55.000 18.66 0.00 0.00 3.41
193 194 0.254747 TTTTGTCGGGCCCCTATCTG 59.745 55.000 18.66 0.00 0.00 2.90
194 195 1.143073 GATTTTGTCGGGCCCCTATCT 59.857 52.381 18.66 0.00 0.00 1.98
195 196 1.605753 GATTTTGTCGGGCCCCTATC 58.394 55.000 18.66 6.45 0.00 2.08
196 197 0.179029 CGATTTTGTCGGGCCCCTAT 60.179 55.000 18.66 0.00 46.47 2.57
197 198 1.222387 CGATTTTGTCGGGCCCCTA 59.778 57.895 18.66 0.46 46.47 3.53
198 199 2.045340 CGATTTTGTCGGGCCCCT 60.045 61.111 18.66 0.00 46.47 4.79
206 207 7.453034 TCTACGTGATTTCATTCGATTTTGTC 58.547 34.615 0.00 0.00 0.00 3.18
207 208 7.359262 TCTACGTGATTTCATTCGATTTTGT 57.641 32.000 0.00 0.00 0.00 2.83
210 211 8.712363 CCATATCTACGTGATTTCATTCGATTT 58.288 33.333 0.00 0.00 36.65 2.17
211 212 8.088365 TCCATATCTACGTGATTTCATTCGATT 58.912 33.333 0.00 0.00 36.65 3.34
212 213 7.602753 TCCATATCTACGTGATTTCATTCGAT 58.397 34.615 0.00 0.00 36.65 3.59
213 214 6.977213 TCCATATCTACGTGATTTCATTCGA 58.023 36.000 0.00 0.00 36.65 3.71
214 215 6.309009 CCTCCATATCTACGTGATTTCATTCG 59.691 42.308 0.00 0.00 36.65 3.34
215 216 7.378966 TCCTCCATATCTACGTGATTTCATTC 58.621 38.462 0.00 0.00 36.65 2.67
216 217 7.303182 TCCTCCATATCTACGTGATTTCATT 57.697 36.000 0.00 0.00 36.65 2.57
217 218 6.918067 TCCTCCATATCTACGTGATTTCAT 57.082 37.500 0.00 0.00 36.65 2.57
218 219 6.724893 TTCCTCCATATCTACGTGATTTCA 57.275 37.500 0.00 0.00 36.65 2.69
219 220 7.872993 TCATTTCCTCCATATCTACGTGATTTC 59.127 37.037 0.00 0.00 36.65 2.17
220 221 7.735917 TCATTTCCTCCATATCTACGTGATTT 58.264 34.615 0.00 0.00 36.65 2.17
221 222 7.303182 TCATTTCCTCCATATCTACGTGATT 57.697 36.000 0.00 0.00 36.65 2.57
222 223 6.573289 GCTCATTTCCTCCATATCTACGTGAT 60.573 42.308 0.00 1.82 39.11 3.06
223 224 5.279006 GCTCATTTCCTCCATATCTACGTGA 60.279 44.000 0.00 0.00 0.00 4.35
224 225 4.926238 GCTCATTTCCTCCATATCTACGTG 59.074 45.833 0.00 0.00 0.00 4.49
225 226 4.835615 AGCTCATTTCCTCCATATCTACGT 59.164 41.667 0.00 0.00 0.00 3.57
226 227 5.398603 AGCTCATTTCCTCCATATCTACG 57.601 43.478 0.00 0.00 0.00 3.51
227 228 5.406649 CGAGCTCATTTCCTCCATATCTAC 58.593 45.833 15.40 0.00 0.00 2.59
228 229 4.081972 GCGAGCTCATTTCCTCCATATCTA 60.082 45.833 15.40 0.00 0.00 1.98
229 230 3.306641 GCGAGCTCATTTCCTCCATATCT 60.307 47.826 15.40 0.00 0.00 1.98
230 231 2.999355 GCGAGCTCATTTCCTCCATATC 59.001 50.000 15.40 0.00 0.00 1.63
231 232 2.369860 TGCGAGCTCATTTCCTCCATAT 59.630 45.455 15.40 0.00 0.00 1.78
232 233 1.762370 TGCGAGCTCATTTCCTCCATA 59.238 47.619 15.40 0.00 0.00 2.74
233 234 0.543277 TGCGAGCTCATTTCCTCCAT 59.457 50.000 15.40 0.00 0.00 3.41
234 235 0.107993 CTGCGAGCTCATTTCCTCCA 60.108 55.000 15.40 0.00 0.00 3.86
235 236 0.176680 TCTGCGAGCTCATTTCCTCC 59.823 55.000 15.40 0.00 0.00 4.30
236 237 2.237393 ATCTGCGAGCTCATTTCCTC 57.763 50.000 15.40 0.00 0.00 3.71
237 238 2.170187 AGAATCTGCGAGCTCATTTCCT 59.830 45.455 15.40 0.00 0.00 3.36
238 239 2.543430 GAGAATCTGCGAGCTCATTTCC 59.457 50.000 15.40 0.00 0.00 3.13
239 240 2.218302 CGAGAATCTGCGAGCTCATTTC 59.782 50.000 15.40 8.48 0.00 2.17
240 241 2.200067 CGAGAATCTGCGAGCTCATTT 58.800 47.619 15.40 0.00 0.00 2.32
241 242 1.850377 CGAGAATCTGCGAGCTCATT 58.150 50.000 15.40 5.59 0.00 2.57
242 243 0.597118 GCGAGAATCTGCGAGCTCAT 60.597 55.000 15.40 0.00 0.00 2.90
243 244 1.226802 GCGAGAATCTGCGAGCTCA 60.227 57.895 15.40 0.00 0.00 4.26
244 245 0.803768 TTGCGAGAATCTGCGAGCTC 60.804 55.000 2.73 2.73 37.43 4.09
245 246 0.179089 ATTGCGAGAATCTGCGAGCT 60.179 50.000 6.35 0.00 37.43 4.09
246 247 0.654683 AATTGCGAGAATCTGCGAGC 59.345 50.000 6.35 0.00 37.43 5.03
247 248 3.395858 AAAATTGCGAGAATCTGCGAG 57.604 42.857 6.35 0.00 37.43 5.03
248 249 3.829886 AAAAATTGCGAGAATCTGCGA 57.170 38.095 6.35 2.59 37.43 5.10
278 279 9.618890 CCTGATTAGATTCTTCAAATCTGGTTA 57.381 33.333 17.37 0.00 40.13 2.85
279 280 8.331740 TCCTGATTAGATTCTTCAAATCTGGTT 58.668 33.333 21.21 0.00 42.98 3.67
280 281 7.772757 GTCCTGATTAGATTCTTCAAATCTGGT 59.227 37.037 21.21 0.07 42.98 4.00
281 282 7.042187 CGTCCTGATTAGATTCTTCAAATCTGG 60.042 40.741 18.55 18.55 43.42 3.86
282 283 7.042187 CCGTCCTGATTAGATTCTTCAAATCTG 60.042 40.741 9.89 7.80 37.54 2.90
283 284 6.989169 CCGTCCTGATTAGATTCTTCAAATCT 59.011 38.462 5.67 5.67 39.97 2.40
284 285 6.986817 TCCGTCCTGATTAGATTCTTCAAATC 59.013 38.462 0.00 0.00 0.00 2.17
285 286 6.889198 TCCGTCCTGATTAGATTCTTCAAAT 58.111 36.000 0.00 0.00 0.00 2.32
286 287 6.294361 TCCGTCCTGATTAGATTCTTCAAA 57.706 37.500 0.00 0.00 0.00 2.69
287 288 5.932619 TCCGTCCTGATTAGATTCTTCAA 57.067 39.130 0.00 0.00 0.00 2.69
288 289 7.606349 CATATCCGTCCTGATTAGATTCTTCA 58.394 38.462 0.00 0.00 0.00 3.02
289 290 6.533367 GCATATCCGTCCTGATTAGATTCTTC 59.467 42.308 0.00 0.00 0.00 2.87
290 291 6.402222 GCATATCCGTCCTGATTAGATTCTT 58.598 40.000 0.00 0.00 0.00 2.52
291 292 5.393569 CGCATATCCGTCCTGATTAGATTCT 60.394 44.000 0.00 0.00 0.00 2.40
292 293 4.800993 CGCATATCCGTCCTGATTAGATTC 59.199 45.833 0.00 0.00 0.00 2.52
293 294 4.462834 TCGCATATCCGTCCTGATTAGATT 59.537 41.667 0.00 0.00 0.00 2.40
294 295 4.017126 TCGCATATCCGTCCTGATTAGAT 58.983 43.478 0.00 0.00 0.00 1.98
295 296 3.418047 TCGCATATCCGTCCTGATTAGA 58.582 45.455 0.00 0.00 0.00 2.10
296 297 3.850122 TCGCATATCCGTCCTGATTAG 57.150 47.619 0.00 0.00 0.00 1.73
297 298 4.594123 TTTCGCATATCCGTCCTGATTA 57.406 40.909 0.00 0.00 0.00 1.75
298 299 3.469008 TTTCGCATATCCGTCCTGATT 57.531 42.857 0.00 0.00 0.00 2.57
299 300 3.329386 CATTTCGCATATCCGTCCTGAT 58.671 45.455 0.00 0.00 0.00 2.90
300 301 2.547855 CCATTTCGCATATCCGTCCTGA 60.548 50.000 0.00 0.00 0.00 3.86
301 302 1.800586 CCATTTCGCATATCCGTCCTG 59.199 52.381 0.00 0.00 0.00 3.86
302 303 1.691976 TCCATTTCGCATATCCGTCCT 59.308 47.619 0.00 0.00 0.00 3.85
303 304 2.163818 TCCATTTCGCATATCCGTCC 57.836 50.000 0.00 0.00 0.00 4.79
304 305 2.673368 GGATCCATTTCGCATATCCGTC 59.327 50.000 6.95 0.00 0.00 4.79
305 306 2.615493 GGGATCCATTTCGCATATCCGT 60.615 50.000 15.23 0.00 37.56 4.69
306 307 2.009774 GGGATCCATTTCGCATATCCG 58.990 52.381 15.23 0.00 37.56 4.18
307 308 2.009774 CGGGATCCATTTCGCATATCC 58.990 52.381 15.23 0.00 36.23 2.59
308 309 1.398390 GCGGGATCCATTTCGCATATC 59.602 52.381 23.05 0.00 46.33 1.63
309 310 1.453155 GCGGGATCCATTTCGCATAT 58.547 50.000 23.05 0.00 46.33 1.78
310 311 2.927004 GCGGGATCCATTTCGCATA 58.073 52.632 23.05 0.00 46.33 3.14
311 312 3.749981 GCGGGATCCATTTCGCAT 58.250 55.556 23.05 0.00 46.33 4.73
314 315 1.334059 CGAATTGCGGGATCCATTTCG 60.334 52.381 15.23 14.98 38.69 3.46
315 316 2.405892 CGAATTGCGGGATCCATTTC 57.594 50.000 15.23 7.56 36.03 2.17
328 329 1.094785 AGATCCCGCAAACCGAATTG 58.905 50.000 0.00 0.00 40.02 2.32
329 330 2.093128 AGTAGATCCCGCAAACCGAATT 60.093 45.455 0.00 0.00 40.02 2.17
330 331 1.485066 AGTAGATCCCGCAAACCGAAT 59.515 47.619 0.00 0.00 40.02 3.34
331 332 0.899720 AGTAGATCCCGCAAACCGAA 59.100 50.000 0.00 0.00 40.02 4.30
332 333 1.679680 CTAGTAGATCCCGCAAACCGA 59.320 52.381 0.00 0.00 40.02 4.69
333 334 1.679680 TCTAGTAGATCCCGCAAACCG 59.320 52.381 0.00 0.00 0.00 4.44
334 335 2.957006 TCTCTAGTAGATCCCGCAAACC 59.043 50.000 0.00 0.00 0.00 3.27
335 336 4.857509 ATCTCTAGTAGATCCCGCAAAC 57.142 45.455 0.00 0.00 41.32 2.93
336 337 5.047943 GCTAATCTCTAGTAGATCCCGCAAA 60.048 44.000 0.00 0.00 44.56 3.68
337 338 4.459685 GCTAATCTCTAGTAGATCCCGCAA 59.540 45.833 0.00 0.00 44.56 4.85
338 339 4.011023 GCTAATCTCTAGTAGATCCCGCA 58.989 47.826 0.00 0.00 44.56 5.69
339 340 4.011023 TGCTAATCTCTAGTAGATCCCGC 58.989 47.826 0.00 1.64 44.56 6.13
340 341 6.767524 AATGCTAATCTCTAGTAGATCCCG 57.232 41.667 0.00 0.00 44.56 5.14
341 342 7.327214 CCAAATGCTAATCTCTAGTAGATCCC 58.673 42.308 0.00 0.00 44.56 3.85
342 343 7.179338 TCCCAAATGCTAATCTCTAGTAGATCC 59.821 40.741 0.00 0.78 44.56 3.36
343 344 8.128322 TCCCAAATGCTAATCTCTAGTAGATC 57.872 38.462 0.00 0.00 44.56 2.75
345 346 7.526192 GCATCCCAAATGCTAATCTCTAGTAGA 60.526 40.741 0.00 0.00 41.52 2.59
346 347 6.593382 GCATCCCAAATGCTAATCTCTAGTAG 59.407 42.308 2.84 0.00 41.52 2.57
347 348 6.467677 GCATCCCAAATGCTAATCTCTAGTA 58.532 40.000 2.84 0.00 41.52 1.82
348 349 5.312079 GCATCCCAAATGCTAATCTCTAGT 58.688 41.667 2.84 0.00 41.52 2.57
349 350 4.699257 GGCATCCCAAATGCTAATCTCTAG 59.301 45.833 9.62 0.00 44.02 2.43
350 351 4.352001 AGGCATCCCAAATGCTAATCTCTA 59.648 41.667 9.62 0.00 44.02 2.43
351 352 3.139770 AGGCATCCCAAATGCTAATCTCT 59.860 43.478 9.62 0.00 44.02 3.10
352 353 3.494332 AGGCATCCCAAATGCTAATCTC 58.506 45.455 9.62 0.00 44.02 2.75
353 354 3.607490 AGGCATCCCAAATGCTAATCT 57.393 42.857 9.62 0.00 44.02 2.40
354 355 4.374399 CAAAGGCATCCCAAATGCTAATC 58.626 43.478 9.62 0.00 44.02 1.75
355 356 3.135167 CCAAAGGCATCCCAAATGCTAAT 59.865 43.478 9.62 0.00 44.02 1.73
356 357 2.500910 CCAAAGGCATCCCAAATGCTAA 59.499 45.455 9.62 0.00 44.02 3.09
357 358 2.109774 CCAAAGGCATCCCAAATGCTA 58.890 47.619 9.62 0.00 44.02 3.49
358 359 0.906775 CCAAAGGCATCCCAAATGCT 59.093 50.000 9.62 0.00 44.02 3.79
359 360 0.107557 CCCAAAGGCATCCCAAATGC 60.108 55.000 1.40 1.40 43.85 3.56
371 372 2.027469 AGTAGTTCCGTAAGCCCAAAGG 60.027 50.000 0.00 0.00 0.00 3.11
372 373 3.000727 CAGTAGTTCCGTAAGCCCAAAG 58.999 50.000 0.00 0.00 0.00 2.77
373 374 2.872842 GCAGTAGTTCCGTAAGCCCAAA 60.873 50.000 0.00 0.00 0.00 3.28
374 375 1.338389 GCAGTAGTTCCGTAAGCCCAA 60.338 52.381 0.00 0.00 0.00 4.12
375 376 0.248289 GCAGTAGTTCCGTAAGCCCA 59.752 55.000 0.00 0.00 0.00 5.36
376 377 0.804933 CGCAGTAGTTCCGTAAGCCC 60.805 60.000 0.00 0.00 0.00 5.19
377 378 0.108945 ACGCAGTAGTTCCGTAAGCC 60.109 55.000 0.00 0.00 41.94 4.35
378 379 0.989890 CACGCAGTAGTTCCGTAAGC 59.010 55.000 0.00 0.00 41.61 3.09
379 380 2.342910 ACACGCAGTAGTTCCGTAAG 57.657 50.000 0.00 0.00 41.61 2.34
380 381 2.412716 CGTACACGCAGTAGTTCCGTAA 60.413 50.000 0.00 0.00 41.61 3.18
381 382 1.128507 CGTACACGCAGTAGTTCCGTA 59.871 52.381 0.00 0.00 41.61 4.02
382 383 0.110056 CGTACACGCAGTAGTTCCGT 60.110 55.000 0.00 0.00 41.61 4.69
383 384 0.166597 TCGTACACGCAGTAGTTCCG 59.833 55.000 0.00 0.00 41.61 4.30
384 385 2.097142 AGATCGTACACGCAGTAGTTCC 59.903 50.000 0.00 0.00 41.61 3.62
385 386 3.402058 AGATCGTACACGCAGTAGTTC 57.598 47.619 0.00 0.00 41.61 3.01
386 387 3.844577 AAGATCGTACACGCAGTAGTT 57.155 42.857 0.00 0.00 41.61 2.24
387 388 5.296283 AGAATAAGATCGTACACGCAGTAGT 59.704 40.000 0.00 0.00 41.61 2.73
388 389 5.621634 CAGAATAAGATCGTACACGCAGTAG 59.378 44.000 0.00 0.00 41.61 2.57
389 390 5.065602 ACAGAATAAGATCGTACACGCAGTA 59.934 40.000 0.00 0.00 41.61 2.74
391 392 4.352039 ACAGAATAAGATCGTACACGCAG 58.648 43.478 0.00 0.00 39.60 5.18
392 393 4.348656 GACAGAATAAGATCGTACACGCA 58.651 43.478 0.00 0.00 39.60 5.24
393 394 3.729716 GGACAGAATAAGATCGTACACGC 59.270 47.826 0.00 0.00 39.60 5.34
394 395 3.966844 CGGACAGAATAAGATCGTACACG 59.033 47.826 0.00 0.00 41.45 4.49
395 396 4.968788 GTCGGACAGAATAAGATCGTACAC 59.031 45.833 2.62 0.00 0.00 2.90
396 397 4.880120 AGTCGGACAGAATAAGATCGTACA 59.120 41.667 11.27 0.00 0.00 2.90
397 398 5.236911 AGAGTCGGACAGAATAAGATCGTAC 59.763 44.000 11.27 0.00 0.00 3.67
398 399 5.366460 AGAGTCGGACAGAATAAGATCGTA 58.634 41.667 11.27 0.00 0.00 3.43
399 400 4.200874 AGAGTCGGACAGAATAAGATCGT 58.799 43.478 11.27 0.00 0.00 3.73
400 401 4.822036 AGAGTCGGACAGAATAAGATCG 57.178 45.455 11.27 0.00 0.00 3.69
401 402 7.331440 TCGTATAGAGTCGGACAGAATAAGATC 59.669 40.741 11.27 0.00 0.00 2.75
402 403 7.160049 TCGTATAGAGTCGGACAGAATAAGAT 58.840 38.462 11.27 0.00 0.00 2.40
403 404 6.519382 TCGTATAGAGTCGGACAGAATAAGA 58.481 40.000 11.27 8.93 0.00 2.10
404 405 6.782298 TCGTATAGAGTCGGACAGAATAAG 57.218 41.667 11.27 6.98 0.00 1.73
405 406 6.348295 GCATCGTATAGAGTCGGACAGAATAA 60.348 42.308 11.27 0.00 0.00 1.40
406 407 5.121925 GCATCGTATAGAGTCGGACAGAATA 59.878 44.000 11.27 2.03 0.00 1.75
407 408 4.083217 GCATCGTATAGAGTCGGACAGAAT 60.083 45.833 11.27 2.96 0.00 2.40
408 409 3.250280 GCATCGTATAGAGTCGGACAGAA 59.750 47.826 11.27 0.00 0.00 3.02
409 410 2.806818 GCATCGTATAGAGTCGGACAGA 59.193 50.000 11.27 0.00 0.00 3.41
410 411 2.095668 GGCATCGTATAGAGTCGGACAG 60.096 54.545 11.27 0.00 0.00 3.51
411 412 1.878088 GGCATCGTATAGAGTCGGACA 59.122 52.381 11.27 0.00 0.00 4.02
412 413 2.152830 AGGCATCGTATAGAGTCGGAC 58.847 52.381 0.00 0.00 0.00 4.79
413 414 2.563261 AGGCATCGTATAGAGTCGGA 57.437 50.000 0.00 0.00 0.00 4.55
414 415 3.336468 ACTAGGCATCGTATAGAGTCGG 58.664 50.000 0.00 0.00 0.00 4.79
415 416 4.247258 AGACTAGGCATCGTATAGAGTCG 58.753 47.826 0.00 0.00 37.50 4.18
416 417 6.311935 CACTAGACTAGGCATCGTATAGAGTC 59.688 46.154 14.03 0.00 31.36 3.36
417 418 6.167685 CACTAGACTAGGCATCGTATAGAGT 58.832 44.000 14.03 0.00 31.36 3.24
418 419 5.583061 CCACTAGACTAGGCATCGTATAGAG 59.417 48.000 14.03 3.88 31.36 2.43
419 420 5.012871 ACCACTAGACTAGGCATCGTATAGA 59.987 44.000 14.03 0.00 31.36 1.98
420 421 5.122554 CACCACTAGACTAGGCATCGTATAG 59.877 48.000 14.03 3.49 32.70 1.31
421 422 5.001874 CACCACTAGACTAGGCATCGTATA 58.998 45.833 14.03 0.00 0.00 1.47
422 423 3.821600 CACCACTAGACTAGGCATCGTAT 59.178 47.826 14.03 0.00 0.00 3.06
423 424 3.211865 CACCACTAGACTAGGCATCGTA 58.788 50.000 14.03 0.00 0.00 3.43
424 425 2.025155 CACCACTAGACTAGGCATCGT 58.975 52.381 14.03 0.00 0.00 3.73
425 426 2.025155 ACACCACTAGACTAGGCATCG 58.975 52.381 14.03 1.37 0.00 3.84
426 427 2.482142 GCACACCACTAGACTAGGCATC 60.482 54.545 14.03 0.00 0.00 3.91
427 428 1.482593 GCACACCACTAGACTAGGCAT 59.517 52.381 14.03 0.00 0.00 4.40
428 429 0.895530 GCACACCACTAGACTAGGCA 59.104 55.000 14.03 0.00 0.00 4.75
429 430 1.134965 CAGCACACCACTAGACTAGGC 60.135 57.143 14.03 6.29 0.00 3.93
430 431 1.134965 GCAGCACACCACTAGACTAGG 60.135 57.143 14.03 0.44 0.00 3.02
431 432 1.134965 GGCAGCACACCACTAGACTAG 60.135 57.143 8.00 8.00 0.00 2.57
432 433 0.895530 GGCAGCACACCACTAGACTA 59.104 55.000 0.00 0.00 0.00 2.59
433 434 1.121407 TGGCAGCACACCACTAGACT 61.121 55.000 0.00 0.00 30.29 3.24
434 435 0.036010 ATGGCAGCACACCACTAGAC 60.036 55.000 0.00 0.00 40.82 2.59
435 436 0.692476 AATGGCAGCACACCACTAGA 59.308 50.000 0.00 0.00 40.82 2.43
436 437 1.200716 CAAATGGCAGCACACCACTAG 59.799 52.381 0.00 0.00 40.82 2.57
437 438 1.246649 CAAATGGCAGCACACCACTA 58.753 50.000 0.00 0.00 40.82 2.74
438 439 1.466025 CCAAATGGCAGCACACCACT 61.466 55.000 0.00 0.00 40.82 4.00
439 440 1.005867 CCAAATGGCAGCACACCAC 60.006 57.895 0.00 0.00 40.82 4.16
440 441 0.542467 ATCCAAATGGCAGCACACCA 60.542 50.000 0.00 0.00 42.61 4.17
441 442 0.174162 GATCCAAATGGCAGCACACC 59.826 55.000 0.00 0.00 34.44 4.16
442 443 0.889994 TGATCCAAATGGCAGCACAC 59.110 50.000 0.00 0.00 34.44 3.82
443 444 1.179152 CTGATCCAAATGGCAGCACA 58.821 50.000 0.00 0.00 34.44 4.57
444 445 0.458669 CCTGATCCAAATGGCAGCAC 59.541 55.000 0.00 0.00 34.44 4.40
445 446 0.332293 TCCTGATCCAAATGGCAGCA 59.668 50.000 0.00 0.00 34.44 4.41
446 447 1.030457 CTCCTGATCCAAATGGCAGC 58.970 55.000 0.00 0.00 34.44 5.25
447 448 2.431954 ACTCCTGATCCAAATGGCAG 57.568 50.000 0.00 0.00 34.44 4.85
448 449 2.905415 AACTCCTGATCCAAATGGCA 57.095 45.000 0.00 0.00 34.44 4.92
449 450 4.438744 CGTTTAACTCCTGATCCAAATGGC 60.439 45.833 0.00 0.00 34.44 4.40
450 451 4.096382 CCGTTTAACTCCTGATCCAAATGG 59.904 45.833 0.00 0.00 0.00 3.16
451 452 4.438744 GCCGTTTAACTCCTGATCCAAATG 60.439 45.833 0.00 0.00 0.00 2.32
452 453 3.694566 GCCGTTTAACTCCTGATCCAAAT 59.305 43.478 0.00 0.00 0.00 2.32
453 454 3.078837 GCCGTTTAACTCCTGATCCAAA 58.921 45.455 0.00 0.00 0.00 3.28
454 455 2.304761 AGCCGTTTAACTCCTGATCCAA 59.695 45.455 0.00 0.00 0.00 3.53
455 456 1.906574 AGCCGTTTAACTCCTGATCCA 59.093 47.619 0.00 0.00 0.00 3.41
456 457 2.678336 CAAGCCGTTTAACTCCTGATCC 59.322 50.000 0.00 0.00 0.00 3.36
457 458 3.596214 TCAAGCCGTTTAACTCCTGATC 58.404 45.455 0.00 0.00 0.00 2.92
458 459 3.695830 TCAAGCCGTTTAACTCCTGAT 57.304 42.857 0.00 0.00 0.00 2.90
459 460 3.260884 AGATCAAGCCGTTTAACTCCTGA 59.739 43.478 0.00 0.00 0.00 3.86
460 461 3.372206 CAGATCAAGCCGTTTAACTCCTG 59.628 47.826 0.00 0.00 0.00 3.86
461 462 3.600388 CAGATCAAGCCGTTTAACTCCT 58.400 45.455 0.00 0.00 0.00 3.69
462 463 2.096013 GCAGATCAAGCCGTTTAACTCC 59.904 50.000 0.00 0.00 0.00 3.85
463 464 3.003480 AGCAGATCAAGCCGTTTAACTC 58.997 45.455 6.55 0.00 0.00 3.01
464 465 3.059352 AGCAGATCAAGCCGTTTAACT 57.941 42.857 6.55 0.00 0.00 2.24
465 466 4.332819 ACATAGCAGATCAAGCCGTTTAAC 59.667 41.667 6.55 0.00 0.00 2.01
466 467 4.513442 ACATAGCAGATCAAGCCGTTTAA 58.487 39.130 6.55 0.00 0.00 1.52
467 468 4.119862 GACATAGCAGATCAAGCCGTTTA 58.880 43.478 6.55 0.00 0.00 2.01
468 469 2.939103 GACATAGCAGATCAAGCCGTTT 59.061 45.455 6.55 0.00 0.00 3.60
469 470 2.555199 GACATAGCAGATCAAGCCGTT 58.445 47.619 6.55 0.00 0.00 4.44
470 471 1.536922 CGACATAGCAGATCAAGCCGT 60.537 52.381 6.55 2.71 0.00 5.68
471 472 1.135046 CGACATAGCAGATCAAGCCG 58.865 55.000 6.55 0.21 0.00 5.52
472 473 2.231215 ACGACATAGCAGATCAAGCC 57.769 50.000 6.55 0.00 0.00 4.35
473 474 4.550422 TCATACGACATAGCAGATCAAGC 58.450 43.478 0.00 0.00 0.00 4.01
474 475 7.410193 CGATTTCATACGACATAGCAGATCAAG 60.410 40.741 0.00 0.00 0.00 3.02
475 476 6.363357 CGATTTCATACGACATAGCAGATCAA 59.637 38.462 0.00 0.00 0.00 2.57
476 477 5.858581 CGATTTCATACGACATAGCAGATCA 59.141 40.000 0.00 0.00 0.00 2.92
477 478 5.287274 CCGATTTCATACGACATAGCAGATC 59.713 44.000 0.00 0.00 0.00 2.75
478 479 5.048013 TCCGATTTCATACGACATAGCAGAT 60.048 40.000 0.00 0.00 0.00 2.90
479 480 4.277423 TCCGATTTCATACGACATAGCAGA 59.723 41.667 0.00 0.00 0.00 4.26
480 481 4.383052 GTCCGATTTCATACGACATAGCAG 59.617 45.833 0.00 0.00 0.00 4.24
481 482 4.202070 TGTCCGATTTCATACGACATAGCA 60.202 41.667 0.00 0.00 0.00 3.49
482 483 4.295870 TGTCCGATTTCATACGACATAGC 58.704 43.478 0.00 0.00 0.00 2.97
483 484 5.107837 GCTTGTCCGATTTCATACGACATAG 60.108 44.000 0.00 0.00 0.00 2.23
484 485 4.743151 GCTTGTCCGATTTCATACGACATA 59.257 41.667 0.00 0.00 0.00 2.29
485 486 3.555956 GCTTGTCCGATTTCATACGACAT 59.444 43.478 0.00 0.00 0.00 3.06
486 487 2.927477 GCTTGTCCGATTTCATACGACA 59.073 45.455 0.00 0.00 0.00 4.35
487 488 2.927477 TGCTTGTCCGATTTCATACGAC 59.073 45.455 0.00 0.00 0.00 4.34
488 489 3.239587 TGCTTGTCCGATTTCATACGA 57.760 42.857 0.00 0.00 0.00 3.43
489 490 3.616821 TCTTGCTTGTCCGATTTCATACG 59.383 43.478 0.00 0.00 0.00 3.06
490 491 4.631813 ACTCTTGCTTGTCCGATTTCATAC 59.368 41.667 0.00 0.00 0.00 2.39
491 492 4.832248 ACTCTTGCTTGTCCGATTTCATA 58.168 39.130 0.00 0.00 0.00 2.15
492 493 3.679389 ACTCTTGCTTGTCCGATTTCAT 58.321 40.909 0.00 0.00 0.00 2.57
493 494 3.067106 GACTCTTGCTTGTCCGATTTCA 58.933 45.455 0.00 0.00 0.00 2.69
494 495 2.092838 CGACTCTTGCTTGTCCGATTTC 59.907 50.000 0.00 0.00 0.00 2.17
495 496 2.069273 CGACTCTTGCTTGTCCGATTT 58.931 47.619 0.00 0.00 0.00 2.17
496 497 1.000955 ACGACTCTTGCTTGTCCGATT 59.999 47.619 0.00 0.00 0.00 3.34
497 498 0.603569 ACGACTCTTGCTTGTCCGAT 59.396 50.000 0.00 0.00 0.00 4.18
498 499 1.068748 GTACGACTCTTGCTTGTCCGA 60.069 52.381 0.00 0.00 0.00 4.55
499 500 1.337821 GTACGACTCTTGCTTGTCCG 58.662 55.000 0.00 0.00 0.00 4.79
500 501 1.337821 CGTACGACTCTTGCTTGTCC 58.662 55.000 10.44 0.00 0.00 4.02
501 502 0.708918 GCGTACGACTCTTGCTTGTC 59.291 55.000 21.65 0.00 0.00 3.18
502 503 0.031585 TGCGTACGACTCTTGCTTGT 59.968 50.000 21.65 0.00 0.00 3.16
503 504 1.350193 ATGCGTACGACTCTTGCTTG 58.650 50.000 21.65 0.00 0.00 4.01
504 505 2.798680 CTATGCGTACGACTCTTGCTT 58.201 47.619 21.65 0.00 0.00 3.91
505 506 1.534175 GCTATGCGTACGACTCTTGCT 60.534 52.381 21.65 0.00 0.00 3.91
506 507 0.847035 GCTATGCGTACGACTCTTGC 59.153 55.000 21.65 10.72 0.00 4.01
507 508 2.188837 TGCTATGCGTACGACTCTTG 57.811 50.000 21.65 4.33 0.00 3.02
508 509 2.422479 TCTTGCTATGCGTACGACTCTT 59.578 45.455 21.65 2.20 0.00 2.85
509 510 2.014857 TCTTGCTATGCGTACGACTCT 58.985 47.619 21.65 1.90 0.00 3.24
510 511 2.110226 GTCTTGCTATGCGTACGACTC 58.890 52.381 21.65 1.31 0.00 3.36
511 512 1.743958 AGTCTTGCTATGCGTACGACT 59.256 47.619 21.65 7.06 0.00 4.18
512 513 2.110226 GAGTCTTGCTATGCGTACGAC 58.890 52.381 21.65 11.11 0.00 4.34
513 514 2.014857 AGAGTCTTGCTATGCGTACGA 58.985 47.619 21.65 4.52 0.00 3.43
514 515 2.476873 AGAGTCTTGCTATGCGTACG 57.523 50.000 11.84 11.84 0.00 3.67
515 516 2.860735 CCAAGAGTCTTGCTATGCGTAC 59.139 50.000 24.85 0.00 0.00 3.67
516 517 2.159099 CCCAAGAGTCTTGCTATGCGTA 60.159 50.000 24.85 0.00 0.00 4.42
517 518 1.406069 CCCAAGAGTCTTGCTATGCGT 60.406 52.381 24.85 0.00 0.00 5.24
518 519 1.293924 CCCAAGAGTCTTGCTATGCG 58.706 55.000 24.85 11.55 0.00 4.73
519 520 1.020437 GCCCAAGAGTCTTGCTATGC 58.980 55.000 24.85 19.05 0.00 3.14
520 521 2.706339 AGCCCAAGAGTCTTGCTATG 57.294 50.000 24.85 12.53 0.00 2.23
521 522 4.518249 GTTAAGCCCAAGAGTCTTGCTAT 58.482 43.478 24.85 13.63 0.00 2.97
522 523 3.307480 GGTTAAGCCCAAGAGTCTTGCTA 60.307 47.826 24.85 11.40 0.00 3.49
523 524 2.553247 GGTTAAGCCCAAGAGTCTTGCT 60.553 50.000 24.85 17.77 0.00 3.91
524 525 1.813178 GGTTAAGCCCAAGAGTCTTGC 59.187 52.381 24.85 15.87 0.00 4.01
558 559 5.828299 ACCACCGTAATAATTGTTGGATG 57.172 39.130 0.00 0.00 0.00 3.51
609 612 1.004277 GGGGTGTGTGTGGTGTGATAT 59.996 52.381 0.00 0.00 0.00 1.63
610 613 0.398696 GGGGTGTGTGTGGTGTGATA 59.601 55.000 0.00 0.00 0.00 2.15
611 614 1.150536 GGGGTGTGTGTGGTGTGAT 59.849 57.895 0.00 0.00 0.00 3.06
612 615 1.998438 AGGGGTGTGTGTGGTGTGA 60.998 57.895 0.00 0.00 0.00 3.58
613 616 1.823470 CAGGGGTGTGTGTGGTGTG 60.823 63.158 0.00 0.00 0.00 3.82
614 617 2.595095 CAGGGGTGTGTGTGGTGT 59.405 61.111 0.00 0.00 0.00 4.16
615 618 2.906897 GCAGGGGTGTGTGTGGTG 60.907 66.667 0.00 0.00 0.00 4.17
616 619 3.096495 AGCAGGGGTGTGTGTGGT 61.096 61.111 0.00 0.00 0.00 4.16
617 620 2.281761 GAGCAGGGGTGTGTGTGG 60.282 66.667 0.00 0.00 0.00 4.17
618 621 2.666190 CGAGCAGGGGTGTGTGTG 60.666 66.667 0.00 0.00 0.00 3.82
619 622 4.626081 GCGAGCAGGGGTGTGTGT 62.626 66.667 0.00 0.00 0.00 3.72
652 655 1.660560 AACTGCCATGGATTGCGAGC 61.661 55.000 18.40 0.00 0.00 5.03
669 672 4.082895 TCACTAAGTTCTCCGTAGCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
710 713 2.076863 CGTCTCCAAATCACCACCTTC 58.923 52.381 0.00 0.00 0.00 3.46
768 771 1.080498 ACCATGAGTACCTGAAGGGGA 59.920 52.381 0.56 0.00 40.27 4.81
886 898 2.095263 GTGTGATCGGTCCATTGGTTTG 60.095 50.000 1.86 0.00 0.00 2.93
898 910 2.509336 GAGTGGGCGTGTGATCGG 60.509 66.667 0.00 0.00 0.00 4.18
973 986 5.117355 TGAACTAACTAACAGACGGACAG 57.883 43.478 0.00 0.00 0.00 3.51
974 987 5.242171 TGATGAACTAACTAACAGACGGACA 59.758 40.000 0.00 0.00 0.00 4.02
975 988 5.572126 GTGATGAACTAACTAACAGACGGAC 59.428 44.000 0.00 0.00 0.00 4.79
976 989 5.242171 TGTGATGAACTAACTAACAGACGGA 59.758 40.000 0.00 0.00 0.00 4.69
1038 1055 1.151668 CTCGCTGGTCTTGTTCCAAG 58.848 55.000 0.00 0.00 34.35 3.61
1203 1220 7.070074 TCCCTCTTAAATTTGTTAAACTTGCCA 59.930 33.333 0.00 0.00 0.00 4.92
1221 1238 3.031736 CTCCTCGACCAAATCCCTCTTA 58.968 50.000 0.00 0.00 0.00 2.10
1458 1475 1.069022 GCTCGCATGAACTCTTTGCAA 60.069 47.619 0.00 0.00 36.15 4.08
1500 1517 0.529773 CGGCCTTTAGACTATGCGCA 60.530 55.000 14.96 14.96 0.00 6.09
1553 1570 3.272574 TCTGGACATTGCTGGAATCTC 57.727 47.619 0.00 0.00 0.00 2.75
1566 1583 5.682234 TCTTGAAGCAATCTATCTGGACA 57.318 39.130 0.00 0.00 0.00 4.02
1620 1637 2.715046 TGCTTAGTTGATGGAGCCAAG 58.285 47.619 0.00 0.00 34.30 3.61
1632 1649 5.420725 TGGTGATGTAGTCATGCTTAGTT 57.579 39.130 0.00 0.00 39.48 2.24
1856 1873 8.442632 TTCAAATATTATGGTCTGAGCTGAAG 57.557 34.615 8.47 0.00 0.00 3.02
2010 2027 2.730382 TCTCCATCCACGTTGCTAGTA 58.270 47.619 0.00 0.00 0.00 1.82
2102 2119 5.147330 ACCGAACACTATTCTGTCATTCA 57.853 39.130 0.00 0.00 0.00 2.57
2132 2149 2.049888 TGACCACTGCATGTGTTCAA 57.950 45.000 11.94 0.65 43.52 2.69
2174 2192 3.181434 ACTGGCATGTAAAACAGGAAGGA 60.181 43.478 0.00 0.00 30.30 3.36
2236 2254 0.531974 TCGGTGAGTGTGGCTTTCAC 60.532 55.000 0.00 0.00 46.23 3.18
2237 2255 0.249868 CTCGGTGAGTGTGGCTTTCA 60.250 55.000 0.00 0.00 0.00 2.69
2460 2478 6.204882 AGTTACATAAACAGAAGGAGCACAAC 59.795 38.462 0.00 0.00 40.83 3.32
2464 2482 6.109156 TCAGTTACATAAACAGAAGGAGCA 57.891 37.500 0.00 0.00 40.83 4.26
2636 2656 3.046087 GCTCTGCAGCAACAGCGA 61.046 61.111 9.47 0.00 46.06 4.93
2684 2704 0.597568 CACCATGAATTGTGTGCGGT 59.402 50.000 0.00 0.00 0.00 5.68
2749 2769 7.423199 TGTTGTTGTTGTTGTTGTTAGTTACA 58.577 30.769 0.00 0.00 34.12 2.41
2750 2770 7.854934 TGTTGTTGTTGTTGTTGTTAGTTAC 57.145 32.000 0.00 0.00 0.00 2.50
2990 6702 8.651588 CAAAAATGTTGCTTGTTAGTTACACAA 58.348 29.630 0.00 0.00 36.21 3.33
2991 6703 7.201478 GCAAAAATGTTGCTTGTTAGTTACACA 60.201 33.333 0.00 0.00 41.87 3.72
2992 6704 7.116819 GCAAAAATGTTGCTTGTTAGTTACAC 58.883 34.615 0.00 0.00 41.87 2.90
2993 6705 7.227992 GCAAAAATGTTGCTTGTTAGTTACA 57.772 32.000 0.00 0.00 41.87 2.41
3034 6746 3.068560 GACGTGTTGTAGGTATGCCAAA 58.931 45.455 1.54 0.00 37.19 3.28
3041 6753 3.827876 TCAGGATTGACGTGTTGTAGGTA 59.172 43.478 0.00 0.00 36.04 3.08
3435 7147 0.966920 CTCTGGTACACCCAACGAGT 59.033 55.000 0.00 0.00 44.65 4.18
3528 7240 3.270027 CCATTGTCTGAAATCTGCGGTA 58.730 45.455 0.00 0.00 0.00 4.02
3531 7243 2.096496 GGACCATTGTCTGAAATCTGCG 59.904 50.000 0.00 0.00 41.47 5.18
3765 7477 8.896744 CAAAATAAAGATGCTCATCTGGACTAA 58.103 33.333 12.62 0.00 46.75 2.24
3793 7505 2.618241 AGCGTGAAAGTTGATGCTGAAA 59.382 40.909 0.00 0.00 35.32 2.69
3897 7609 7.435192 CAGAGTTCACATATATCGTGCAAGTTA 59.565 37.037 0.00 0.00 34.27 2.24
3940 7653 3.484229 CGCTTAAGACAGTATGCAGCAAC 60.484 47.826 6.67 0.00 42.53 4.17
4138 7851 3.562973 ACAGAATAAGCCTCAATCATGCG 59.437 43.478 0.00 0.00 0.00 4.73
4172 7885 9.209048 AGGTACAATGATAATGGACAGTAAGTA 57.791 33.333 0.00 0.00 33.04 2.24
4173 7886 8.090788 AGGTACAATGATAATGGACAGTAAGT 57.909 34.615 0.00 0.00 33.04 2.24
4233 7946 1.330521 CACACACGACTTGGTTTGGAG 59.669 52.381 0.00 0.00 0.00 3.86
4234 7947 1.066071 TCACACACGACTTGGTTTGGA 60.066 47.619 0.00 0.00 0.00 3.53
4235 7948 1.374560 TCACACACGACTTGGTTTGG 58.625 50.000 0.00 0.00 0.00 3.28
4236 7949 3.479505 TTTCACACACGACTTGGTTTG 57.520 42.857 0.00 0.00 0.00 2.93
4237 7950 3.672241 GCTTTTCACACACGACTTGGTTT 60.672 43.478 0.00 0.00 0.00 3.27
4238 7951 2.159435 GCTTTTCACACACGACTTGGTT 60.159 45.455 0.00 0.00 0.00 3.67
4246 7959 4.728608 GTGTTCTTTAGCTTTTCACACACG 59.271 41.667 0.00 0.00 34.48 4.49
4312 8025 9.082313 CAGCCCCAAGATTAAAATAATGTAGAT 57.918 33.333 0.00 0.00 0.00 1.98
4326 8039 0.178953 AACTGTGCAGCCCCAAGATT 60.179 50.000 0.00 0.00 0.00 2.40
4369 8083 4.459337 GGTGCTGATTTATACCTAATGGGC 59.541 45.833 0.00 0.00 39.10 5.36
4400 8114 8.082242 GTGACTTGTGCTGATTTATACCTTTTT 58.918 33.333 0.00 0.00 0.00 1.94
4401 8115 7.230510 TGTGACTTGTGCTGATTTATACCTTTT 59.769 33.333 0.00 0.00 0.00 2.27
4402 8116 6.714810 TGTGACTTGTGCTGATTTATACCTTT 59.285 34.615 0.00 0.00 0.00 3.11
4403 8117 6.237901 TGTGACTTGTGCTGATTTATACCTT 58.762 36.000 0.00 0.00 0.00 3.50
4404 8118 5.804639 TGTGACTTGTGCTGATTTATACCT 58.195 37.500 0.00 0.00 0.00 3.08
4405 8119 5.643777 ACTGTGACTTGTGCTGATTTATACC 59.356 40.000 0.00 0.00 0.00 2.73
4406 8120 6.727824 ACTGTGACTTGTGCTGATTTATAC 57.272 37.500 0.00 0.00 0.00 1.47
4407 8121 6.348458 GCAACTGTGACTTGTGCTGATTTATA 60.348 38.462 0.00 0.00 0.00 0.98
4408 8122 5.563475 GCAACTGTGACTTGTGCTGATTTAT 60.563 40.000 0.00 0.00 0.00 1.40
4409 8123 4.261155 GCAACTGTGACTTGTGCTGATTTA 60.261 41.667 0.00 0.00 0.00 1.40
4410 8124 3.489738 GCAACTGTGACTTGTGCTGATTT 60.490 43.478 0.00 0.00 0.00 2.17
4411 8125 2.033801 GCAACTGTGACTTGTGCTGATT 59.966 45.455 0.00 0.00 0.00 2.57
4412 8126 1.605710 GCAACTGTGACTTGTGCTGAT 59.394 47.619 0.00 0.00 0.00 2.90
4413 8127 1.016627 GCAACTGTGACTTGTGCTGA 58.983 50.000 0.00 0.00 0.00 4.26
4414 8128 1.019673 AGCAACTGTGACTTGTGCTG 58.980 50.000 6.65 0.00 0.00 4.41
4415 8129 1.402968 CAAGCAACTGTGACTTGTGCT 59.597 47.619 12.49 5.90 35.71 4.40
4416 8130 1.401552 TCAAGCAACTGTGACTTGTGC 59.598 47.619 17.49 7.22 38.71 4.57
4417 8131 3.763097 TTCAAGCAACTGTGACTTGTG 57.237 42.857 17.49 0.00 38.71 3.33
4418 8132 3.758554 ACTTTCAAGCAACTGTGACTTGT 59.241 39.130 17.49 2.22 38.71 3.16
4419 8133 4.100529 CACTTTCAAGCAACTGTGACTTG 58.899 43.478 13.88 13.88 38.84 3.16
4567 8282 1.198637 CTCTGCAGTTTTAGCTGTGGC 59.801 52.381 14.67 0.00 38.65 5.01
4570 8285 2.224378 TGAGCTCTGCAGTTTTAGCTGT 60.224 45.455 26.98 9.06 45.04 4.40
4611 8326 6.262601 CCTTGTTAAATAATTAGCACCGGTG 58.737 40.000 30.66 30.66 32.77 4.94
4622 8337 7.041440 GCCAAAACTGTTGCCTTGTTAAATAAT 60.041 33.333 0.00 0.00 0.00 1.28
4638 8353 2.029649 GCTGTCATCATGCCAAAACTGT 60.030 45.455 0.00 0.00 0.00 3.55
4651 8366 1.071605 GTCACGGTTCTGCTGTCATC 58.928 55.000 0.00 0.00 33.66 2.92
4667 8382 5.553123 TCGTGCTTTTTATAGGGAAAGTCA 58.447 37.500 0.00 0.00 35.74 3.41
4670 8385 5.163663 TGCATCGTGCTTTTTATAGGGAAAG 60.164 40.000 10.54 0.00 45.31 2.62
4674 8389 4.836125 ATGCATCGTGCTTTTTATAGGG 57.164 40.909 10.54 0.00 45.31 3.53
4701 8417 4.790765 AAGGCAAGAACAAGGAATAAGC 57.209 40.909 0.00 0.00 0.00 3.09
4719 8435 5.533903 CCCAGAATGATGATCCAACTTAAGG 59.466 44.000 7.53 0.00 39.69 2.69
4723 8439 4.018141 TGACCCAGAATGATGATCCAACTT 60.018 41.667 0.00 0.00 39.69 2.66
4743 8459 4.828925 GCCTGCCGAGGAGCTGAC 62.829 72.222 0.00 0.00 42.93 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.