Multiple sequence alignment - TraesCS3B01G266600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G266600 chr3B 100.000 3728 0 0 921 4648 427575642 427579369 0.000000e+00 6885.0
1 TraesCS3B01G266600 chr3B 100.000 2411 0 0 5006 7416 427579727 427582137 0.000000e+00 4453.0
2 TraesCS3B01G266600 chr3B 100.000 542 0 0 1 542 427574722 427575263 0.000000e+00 1002.0
3 TraesCS3B01G266600 chr3B 96.109 257 8 2 3063 3318 276490665 276490920 1.150000e-112 418.0
4 TraesCS3B01G266600 chr3B 94.776 268 12 2 3063 3329 785671709 785671975 4.140000e-112 416.0
5 TraesCS3B01G266600 chr3B 93.007 143 8 1 2909 3051 427577594 427577734 2.710000e-49 207.0
6 TraesCS3B01G266600 chr3B 93.007 143 8 1 2873 3013 427577630 427577772 2.710000e-49 207.0
7 TraesCS3B01G266600 chr3B 90.654 107 8 1 2945 3051 427577594 427577698 2.790000e-29 141.0
8 TraesCS3B01G266600 chr3B 90.654 107 8 1 2873 2977 427577666 427577772 2.790000e-29 141.0
9 TraesCS3B01G266600 chr3B 83.019 106 16 2 159 263 51028127 51028023 2.200000e-15 95.3
10 TraesCS3B01G266600 chr3B 84.270 89 14 0 2981 3069 427577450 427577538 3.690000e-13 87.9
11 TraesCS3B01G266600 chr3B 84.270 89 14 0 2729 2817 427577702 427577790 3.690000e-13 87.9
12 TraesCS3B01G266600 chr3B 85.915 71 8 1 2981 3051 427577594 427577662 2.870000e-09 75.0
13 TraesCS3B01G266600 chr3B 85.915 71 8 1 2873 2941 427577702 427577772 2.870000e-09 75.0
14 TraesCS3B01G266600 chr3D 96.351 2028 62 5 922 2944 330044362 330046382 0.000000e+00 3325.0
15 TraesCS3B01G266600 chr3D 92.152 1784 71 27 5272 7008 330048481 330050242 0.000000e+00 2455.0
16 TraesCS3B01G266600 chr3D 95.716 1167 44 4 3321 4483 330046404 330047568 0.000000e+00 1873.0
17 TraesCS3B01G266600 chr3D 88.323 334 26 6 2 334 330042465 330042786 9.020000e-104 388.0
18 TraesCS3B01G266600 chr3D 89.535 172 17 1 5110 5281 419520807 419520637 4.510000e-52 217.0
19 TraesCS3B01G266600 chr3D 87.978 183 19 3 5098 5280 87925989 87926168 5.830000e-51 213.0
20 TraesCS3B01G266600 chr3D 91.489 141 11 1 7036 7176 330050346 330050485 7.590000e-45 193.0
21 TraesCS3B01G266600 chr3D 89.933 149 3 2 4510 4648 330048202 330048348 1.640000e-41 182.0
22 TraesCS3B01G266600 chr3D 96.296 108 4 0 5006 5113 330048375 330048482 2.130000e-40 178.0
23 TraesCS3B01G266600 chr3D 90.977 133 11 1 7194 7326 330051607 330051738 2.130000e-40 178.0
24 TraesCS3B01G266600 chr3D 97.849 93 2 0 2945 3037 330046311 330046403 2.140000e-35 161.0
25 TraesCS3B01G266600 chr3D 98.611 72 1 0 2909 2980 330046311 330046382 2.170000e-25 128.0
26 TraesCS3B01G266600 chr3D 82.022 89 16 0 2981 3069 330046167 330046255 7.980000e-10 76.8
27 TraesCS3B01G266600 chr3D 85.915 71 8 1 2981 3051 330046311 330046379 2.870000e-09 75.0
28 TraesCS3B01G266600 chr3A 96.449 1549 47 4 925 2469 445261580 445263124 0.000000e+00 2549.0
29 TraesCS3B01G266600 chr3A 93.796 1354 58 8 3316 4648 445263216 445264564 0.000000e+00 2012.0
30 TraesCS3B01G266600 chr3A 90.385 1144 46 17 5932 7038 445265581 445266697 0.000000e+00 1445.0
31 TraesCS3B01G266600 chr3A 90.120 334 32 1 1 333 445227642 445227975 4.110000e-117 433.0
32 TraesCS3B01G266600 chr3A 92.233 309 19 4 5489 5792 445265280 445265588 4.110000e-117 433.0
33 TraesCS3B01G266600 chr3A 91.518 224 15 1 5270 5489 445264705 445264928 9.350000e-79 305.0
34 TraesCS3B01G266600 chr3A 91.279 172 15 0 5110 5281 600921018 600920847 1.240000e-57 235.0
35 TraesCS3B01G266600 chr3A 97.222 108 3 0 5006 5113 445264598 445264705 4.570000e-42 183.0
36 TraesCS3B01G266600 chr3A 91.000 100 2 1 2977 3069 445263121 445263220 2.170000e-25 128.0
37 TraesCS3B01G266600 chr3A 93.421 76 5 0 2778 2853 445263181 445263256 6.080000e-21 113.0
38 TraesCS3B01G266600 chr3A 97.500 40 1 0 2905 2944 445263121 445263160 1.340000e-07 69.4
39 TraesCS3B01G266600 chr3A 97.500 40 1 0 2941 2980 445263121 445263160 1.340000e-07 69.4
40 TraesCS3B01G266600 chr3A 100.000 34 0 0 2875 2908 445263127 445263160 6.210000e-06 63.9
41 TraesCS3B01G266600 chr2B 97.647 255 5 1 3063 3317 463927687 463927434 3.180000e-118 436.0
42 TraesCS3B01G266600 chr2B 93.863 277 10 7 3062 3337 762387372 762387642 1.930000e-110 411.0
43 TraesCS3B01G266600 chr1B 97.647 255 5 1 3063 3317 141119632 141119885 3.180000e-118 436.0
44 TraesCS3B01G266600 chr1B 96.498 257 9 0 3059 3315 141116910 141117166 6.880000e-115 425.0
45 TraesCS3B01G266600 chr6B 97.638 254 5 1 3063 3316 124083265 124083517 1.140000e-117 435.0
46 TraesCS3B01G266600 chr6B 96.887 257 7 1 3063 3319 346316911 346316656 5.320000e-116 429.0
47 TraesCS3B01G266600 chr5B 97.255 255 7 0 3064 3318 492584669 492584923 4.110000e-117 433.0
48 TraesCS3B01G266600 chr5B 93.478 46 2 1 290 334 51345055 51345100 4.800000e-07 67.6
49 TraesCS3B01G266600 chr5B 93.182 44 2 1 290 332 51216052 51216095 6.210000e-06 63.9
50 TraesCS3B01G266600 chr2A 91.860 172 13 1 5112 5282 703708263 703708434 9.620000e-59 239.0
51 TraesCS3B01G266600 chr2A 91.463 164 10 3 5112 5273 419206977 419206816 9.680000e-54 222.0
52 TraesCS3B01G266600 chr7A 92.593 162 12 0 5112 5273 451519972 451519811 4.470000e-57 233.0
53 TraesCS3B01G266600 chr7A 91.463 164 14 0 5112 5275 494786990 494786827 7.490000e-55 226.0
54 TraesCS3B01G266600 chr7A 76.636 214 46 4 6 217 134133047 134133258 1.690000e-21 115.0
55 TraesCS3B01G266600 chr6A 90.964 166 15 0 5109 5274 153367038 153366873 2.690000e-54 224.0
56 TraesCS3B01G266600 chr6A 79.348 184 38 0 6 189 546914908 546915091 6.040000e-26 130.0
57 TraesCS3B01G266600 chr5A 90.964 166 14 1 5109 5273 320214240 320214405 9.680000e-54 222.0
58 TraesCS3B01G266600 chr5A 95.349 43 1 1 291 332 38170891 38170933 4.800000e-07 67.6
59 TraesCS3B01G266600 chr7B 80.617 227 42 2 7 232 526233789 526234014 2.750000e-39 174.0
60 TraesCS3B01G266600 chr7D 79.904 209 41 1 18 226 135117790 135117997 1.290000e-32 152.0
61 TraesCS3B01G266600 chr7D 84.138 145 23 0 87 231 497894751 497894895 2.790000e-29 141.0
62 TraesCS3B01G266600 chr7D 100.000 32 0 0 290 321 25491193 25491224 8.040000e-05 60.2
63 TraesCS3B01G266600 chr7D 97.143 35 1 0 290 324 25507245 25507279 8.040000e-05 60.2
64 TraesCS3B01G266600 chr7D 97.143 35 1 0 290 324 135077981 135078015 8.040000e-05 60.2
65 TraesCS3B01G266600 chr7D 97.143 35 1 0 290 324 135120925 135120959 8.040000e-05 60.2
66 TraesCS3B01G266600 chr7D 96.970 33 1 0 150 182 135078314 135078346 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G266600 chr3B 427574722 427582137 7415 False 1214.709091 6885 91.608364 1 7416 11 chr3B.!!$F3 7415
1 TraesCS3B01G266600 chr3D 330042465 330051738 9273 False 767.733333 3325 92.136167 2 7326 12 chr3D.!!$F2 7324
2 TraesCS3B01G266600 chr3A 445261580 445266697 5117 False 670.063636 2549 94.638545 925 7038 11 chr3A.!!$F2 6113
3 TraesCS3B01G266600 chr1B 141116910 141119885 2975 False 430.500000 436 97.072500 3059 3317 2 chr1B.!!$F1 258

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 233 0.239879 CCAATCCAAACCAACCGACG 59.760 55.000 0.00 0.0 0.00 5.12 F
388 1522 0.611896 ATCACTTTTGGAAGGCGGGG 60.612 55.000 0.00 0.0 37.19 5.73 F
1608 3025 1.064060 GGACAAGGGCAAATCGATTCG 59.936 52.381 11.83 0.3 0.00 3.34 F
1675 3092 0.179936 GGAGGGGCAGATGACAAGAG 59.820 60.000 0.00 0.0 0.00 2.85 F
2701 4122 1.548081 TCCGACCGTTAATCCAGTGA 58.452 50.000 0.00 0.0 0.00 3.41 F
3830 8051 0.391130 GCTGTGCCCTACAATCGACA 60.391 55.000 0.00 0.0 39.20 4.35 F
4095 8316 2.164219 CCAAATGGTGATGCACTGTACC 59.836 50.000 0.00 0.0 34.40 3.34 F
5881 11087 0.450184 GGTTCACACCACACACACAC 59.550 55.000 0.00 0.0 43.61 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 3010 0.251916 TGACCGAATCGATTTGCCCT 59.748 50.000 18.46 4.35 0.00 5.19 R
1675 3092 0.475906 ATACAGGCCATCTTCCCAGC 59.524 55.000 5.01 0.00 0.00 4.85 R
2937 4358 1.073444 TGACGATCTACCGGGCTATCT 59.927 52.381 6.32 0.00 0.00 1.98 R
2938 4359 1.531423 TGACGATCTACCGGGCTATC 58.469 55.000 6.32 4.17 0.00 2.08 R
4285 8506 0.467290 GTTTGGACCAGGACCAAGCA 60.467 55.000 25.63 10.94 46.05 3.91 R
5828 11034 0.110295 TGGCTCTTGTGGCTTGCTTA 59.890 50.000 0.00 0.00 0.00 3.09 R
5884 11090 0.036164 ACCTGTGTGTGTGTGTGTGT 59.964 50.000 0.00 0.00 0.00 3.72 R
7382 13816 0.107017 CTTGGATGGCTCGGACCAAT 60.107 55.000 0.00 0.00 44.65 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 8.821686 AATTAATATGATCCTTGTGTCCAACA 57.178 30.769 0.00 0.00 36.85 3.33
142 143 7.339212 TGGTCAAGCTAATTAATTGTATGCAGT 59.661 33.333 11.05 0.94 0.00 4.40
156 157 5.606505 TGTATGCAGTTGTAGACAAGACAA 58.393 37.500 0.00 0.00 36.39 3.18
182 183 9.206690 AGAATTGGATAAGAGATAACTGAGACA 57.793 33.333 0.00 0.00 0.00 3.41
213 214 0.305313 TTAGTGGTTGCGTGCGAAAC 59.695 50.000 6.89 6.89 32.98 2.78
231 232 1.324383 ACCAATCCAAACCAACCGAC 58.676 50.000 0.00 0.00 0.00 4.79
232 233 0.239879 CCAATCCAAACCAACCGACG 59.760 55.000 0.00 0.00 0.00 5.12
233 234 0.948678 CAATCCAAACCAACCGACGT 59.051 50.000 0.00 0.00 0.00 4.34
234 235 2.144730 CAATCCAAACCAACCGACGTA 58.855 47.619 0.00 0.00 0.00 3.57
235 236 2.547299 ATCCAAACCAACCGACGTAA 57.453 45.000 0.00 0.00 0.00 3.18
237 238 0.869730 CCAAACCAACCGACGTAAGG 59.130 55.000 7.89 7.89 46.39 2.69
238 239 1.540797 CCAAACCAACCGACGTAAGGA 60.541 52.381 15.52 0.00 46.39 3.36
239 240 1.528161 CAAACCAACCGACGTAAGGAC 59.472 52.381 15.52 0.00 46.39 3.85
265 266 0.976641 TTGTGATCGCAGACTCCCTT 59.023 50.000 9.26 0.00 42.51 3.95
270 271 3.371285 GTGATCGCAGACTCCCTTTTTAC 59.629 47.826 0.16 0.00 42.51 2.01
278 279 5.566230 GCAGACTCCCTTTTTACGAGTAGAA 60.566 44.000 0.00 0.00 37.00 2.10
334 336 4.487714 AATGTGATCCTATGTCCAACGT 57.512 40.909 0.00 0.00 0.00 3.99
337 339 3.259625 TGTGATCCTATGTCCAACGTTCA 59.740 43.478 0.00 0.00 0.00 3.18
340 342 4.875536 TGATCCTATGTCCAACGTTCAATG 59.124 41.667 0.00 0.00 0.00 2.82
341 343 3.605634 TCCTATGTCCAACGTTCAATGG 58.394 45.455 0.00 0.00 38.09 3.16
342 344 2.682856 CCTATGTCCAACGTTCAATGGG 59.317 50.000 0.00 0.00 37.31 4.00
343 345 2.286365 ATGTCCAACGTTCAATGGGT 57.714 45.000 0.00 0.00 37.31 4.51
344 346 1.313772 TGTCCAACGTTCAATGGGTG 58.686 50.000 0.00 0.00 37.31 4.61
345 347 1.134068 TGTCCAACGTTCAATGGGTGA 60.134 47.619 0.00 0.00 37.31 4.02
346 348 1.535462 GTCCAACGTTCAATGGGTGAG 59.465 52.381 0.00 0.00 37.61 3.51
351 1485 3.040147 ACGTTCAATGGGTGAGTACTG 57.960 47.619 0.00 0.00 37.61 2.74
362 1496 5.507637 TGGGTGAGTACTGGTAAAACAAAA 58.492 37.500 0.00 0.00 0.00 2.44
386 1520 3.385193 AAAATCACTTTTGGAAGGCGG 57.615 42.857 0.00 0.00 37.19 6.13
387 1521 1.256812 AATCACTTTTGGAAGGCGGG 58.743 50.000 0.00 0.00 37.19 6.13
388 1522 0.611896 ATCACTTTTGGAAGGCGGGG 60.612 55.000 0.00 0.00 37.19 5.73
389 1523 1.530655 CACTTTTGGAAGGCGGGGT 60.531 57.895 0.00 0.00 37.19 4.95
390 1524 1.228459 ACTTTTGGAAGGCGGGGTC 60.228 57.895 0.00 0.00 37.19 4.46
391 1525 2.281900 TTTTGGAAGGCGGGGTCG 60.282 61.111 0.00 0.00 39.81 4.79
414 1548 4.148825 CCCCTTCGCCTCCACGAG 62.149 72.222 0.00 0.00 44.00 4.18
422 1556 3.775654 CCTCCACGAGGCTCCACC 61.776 72.222 9.32 0.00 43.29 4.61
423 1557 2.997315 CTCCACGAGGCTCCACCA 60.997 66.667 9.32 0.00 43.14 4.17
424 1558 2.525629 TCCACGAGGCTCCACCAA 60.526 61.111 9.32 0.00 43.14 3.67
425 1559 1.903877 CTCCACGAGGCTCCACCAAT 61.904 60.000 9.32 0.00 43.14 3.16
426 1560 1.746615 CCACGAGGCTCCACCAATG 60.747 63.158 9.32 0.00 43.14 2.82
427 1561 2.045926 ACGAGGCTCCACCAATGC 60.046 61.111 9.32 0.00 43.14 3.56
428 1562 3.197790 CGAGGCTCCACCAATGCG 61.198 66.667 9.32 0.00 43.14 4.73
429 1563 3.512516 GAGGCTCCACCAATGCGC 61.513 66.667 2.15 0.00 43.14 6.09
430 1564 4.349503 AGGCTCCACCAATGCGCA 62.350 61.111 14.96 14.96 43.14 6.09
431 1565 4.120331 GGCTCCACCAATGCGCAC 62.120 66.667 14.90 0.00 38.86 5.34
432 1566 3.364441 GCTCCACCAATGCGCACA 61.364 61.111 14.90 0.00 0.00 4.57
433 1567 2.562912 CTCCACCAATGCGCACAC 59.437 61.111 14.90 0.00 0.00 3.82
434 1568 2.981560 CTCCACCAATGCGCACACC 61.982 63.158 14.90 0.00 0.00 4.16
435 1569 4.403137 CCACCAATGCGCACACCG 62.403 66.667 14.90 2.64 40.75 4.94
436 1570 3.353029 CACCAATGCGCACACCGA 61.353 61.111 14.90 0.00 40.02 4.69
437 1571 2.593148 ACCAATGCGCACACCGAA 60.593 55.556 14.90 0.00 40.02 4.30
438 1572 2.126888 CCAATGCGCACACCGAAC 60.127 61.111 14.90 0.00 40.02 3.95
439 1573 2.126888 CAATGCGCACACCGAACC 60.127 61.111 14.90 0.00 40.02 3.62
440 1574 3.722295 AATGCGCACACCGAACCG 61.722 61.111 14.90 0.00 40.02 4.44
456 1590 3.842923 CGGCAGTCGCTCCCTGAT 61.843 66.667 0.00 0.00 38.60 2.90
457 1591 2.586792 GGCAGTCGCTCCCTGATT 59.413 61.111 0.00 0.00 38.60 2.57
458 1592 1.522580 GGCAGTCGCTCCCTGATTC 60.523 63.158 0.00 0.00 38.60 2.52
459 1593 1.522580 GCAGTCGCTCCCTGATTCC 60.523 63.158 0.00 0.00 34.30 3.01
460 1594 1.144936 CAGTCGCTCCCTGATTCCC 59.855 63.158 0.00 0.00 31.38 3.97
479 1893 3.272847 AAACCCCATTCGCCCCCT 61.273 61.111 0.00 0.00 0.00 4.79
483 1897 3.420482 CCCATTCGCCCCCTTCCT 61.420 66.667 0.00 0.00 0.00 3.36
486 1900 3.480133 ATTCGCCCCCTTCCTCCG 61.480 66.667 0.00 0.00 0.00 4.63
506 1920 3.787001 CACTCCGCCCCCTTCCTC 61.787 72.222 0.00 0.00 0.00 3.71
531 1945 4.426313 CCCCTTTCCTCCGCCCAC 62.426 72.222 0.00 0.00 0.00 4.61
532 1946 3.330720 CCCTTTCCTCCGCCCACT 61.331 66.667 0.00 0.00 0.00 4.00
533 1947 2.269241 CCTTTCCTCCGCCCACTC 59.731 66.667 0.00 0.00 0.00 3.51
534 1948 2.269241 CTTTCCTCCGCCCACTCC 59.731 66.667 0.00 0.00 0.00 3.85
535 1949 3.665675 CTTTCCTCCGCCCACTCCG 62.666 68.421 0.00 0.00 0.00 4.63
1170 2584 4.722700 AAACTGGCGGCTGCGGAT 62.723 61.111 15.88 0.00 44.10 4.18
1364 2778 2.350895 CCCGGAAGTGGTGCATCA 59.649 61.111 0.73 0.00 0.00 3.07
1412 2826 3.840882 AAGGGGAGGGGAACGACGT 62.841 63.158 0.00 0.00 0.00 4.34
1432 2849 3.752412 TCGACGACGACATTATTGACT 57.248 42.857 5.75 0.00 43.81 3.41
1495 2912 1.134098 GCGAGATGGAAATGGAAGGGA 60.134 52.381 0.00 0.00 0.00 4.20
1593 3010 1.271840 CGGGGAAGGGAGATGGACAA 61.272 60.000 0.00 0.00 0.00 3.18
1608 3025 1.064060 GGACAAGGGCAAATCGATTCG 59.936 52.381 11.83 0.30 0.00 3.34
1623 3040 2.376109 GATTCGGTCAGTACTCTGGGA 58.624 52.381 0.00 0.00 41.59 4.37
1661 3078 4.575885 TCTTCGTTTGTAAAGATGGAGGG 58.424 43.478 0.00 0.00 0.00 4.30
1675 3092 0.179936 GGAGGGGCAGATGACAAGAG 59.820 60.000 0.00 0.00 0.00 2.85
1758 3175 6.020360 GTGCAGTTGTGAAATCAGAAAAGTTC 60.020 38.462 0.00 0.00 30.67 3.01
2021 3438 9.793259 TGAAAAATGTTCACCTCTATTAAGACT 57.207 29.630 0.00 0.00 0.00 3.24
2047 3464 3.082548 GAGGAACGGATGATATCGAGGA 58.917 50.000 0.00 0.00 0.00 3.71
2165 3582 4.220821 GGACTCTGAAGGACATCTGTGTAA 59.779 45.833 0.00 0.00 39.09 2.41
2166 3583 5.140747 ACTCTGAAGGACATCTGTGTAAC 57.859 43.478 0.00 0.00 39.09 2.50
2258 3675 2.057922 GGGGGATGCAAGAGAGGAATA 58.942 52.381 0.00 0.00 0.00 1.75
2357 3778 3.701532 TCACTGTTTTTGTTTAGCCCG 57.298 42.857 0.00 0.00 0.00 6.13
2509 3930 9.777297 ATAAACTGCATTTACAAATTGGAAAGT 57.223 25.926 9.42 0.00 33.02 2.66
2540 3961 2.264455 AGAAACAGGAGAGCAGGACAT 58.736 47.619 0.00 0.00 0.00 3.06
2562 3983 8.162878 ACATTATGGCATCTCTCACTATTTTG 57.837 34.615 1.65 0.00 0.00 2.44
2572 3993 9.330063 CATCTCTCACTATTTTGTGGCTTATAA 57.670 33.333 0.00 0.00 38.40 0.98
2701 4122 1.548081 TCCGACCGTTAATCCAGTGA 58.452 50.000 0.00 0.00 0.00 3.41
2713 4134 6.243148 GTTAATCCAGTGAACCCTCCTTTAA 58.757 40.000 0.00 0.00 0.00 1.52
2731 4152 6.430616 TCCTTTAATTAGTTAACCACAACCGG 59.569 38.462 0.00 0.00 29.82 5.28
2918 4339 4.985538 AAATAGATAGCCCGGTAGATCG 57.014 45.455 0.00 0.00 0.00 3.69
2925 4346 2.526432 AGCCCGGTAGATCGTCATTAT 58.474 47.619 0.00 0.00 0.00 1.28
2926 4347 2.897969 AGCCCGGTAGATCGTCATTATT 59.102 45.455 0.00 0.00 0.00 1.40
2927 4348 2.993899 GCCCGGTAGATCGTCATTATTG 59.006 50.000 0.00 0.00 0.00 1.90
2928 4349 3.554337 GCCCGGTAGATCGTCATTATTGT 60.554 47.826 0.00 0.00 0.00 2.71
2929 4350 4.321452 GCCCGGTAGATCGTCATTATTGTA 60.321 45.833 0.00 0.00 0.00 2.41
2930 4351 5.623824 GCCCGGTAGATCGTCATTATTGTAT 60.624 44.000 0.00 0.00 0.00 2.29
2931 4352 6.034591 CCCGGTAGATCGTCATTATTGTATC 58.965 44.000 0.00 0.00 0.00 2.24
2932 4353 6.127703 CCCGGTAGATCGTCATTATTGTATCT 60.128 42.308 0.00 0.00 0.00 1.98
2933 4354 7.066645 CCCGGTAGATCGTCATTATTGTATCTA 59.933 40.741 0.00 0.00 0.00 1.98
2934 4355 8.456471 CCGGTAGATCGTCATTATTGTATCTAA 58.544 37.037 0.00 0.00 30.15 2.10
2935 4356 9.836076 CGGTAGATCGTCATTATTGTATCTAAA 57.164 33.333 0.00 0.00 30.15 1.85
2948 4369 7.735326 ATTGTATCTAAATAGATAGCCCGGT 57.265 36.000 9.82 0.00 43.73 5.28
2949 4370 8.834004 ATTGTATCTAAATAGATAGCCCGGTA 57.166 34.615 9.82 0.00 43.73 4.02
2950 4371 7.876936 TGTATCTAAATAGATAGCCCGGTAG 57.123 40.000 9.82 0.00 43.73 3.18
2951 4372 7.636579 TGTATCTAAATAGATAGCCCGGTAGA 58.363 38.462 9.82 0.00 43.73 2.59
2952 4373 8.280084 TGTATCTAAATAGATAGCCCGGTAGAT 58.720 37.037 9.82 4.98 43.73 1.98
2953 4374 7.826918 ATCTAAATAGATAGCCCGGTAGATC 57.173 40.000 0.00 0.00 41.05 2.75
2954 4375 4.985538 AAATAGATAGCCCGGTAGATCG 57.014 45.455 0.00 0.00 0.00 3.69
2955 4376 3.648507 ATAGATAGCCCGGTAGATCGT 57.351 47.619 0.00 0.00 0.00 3.73
2956 4377 1.823797 AGATAGCCCGGTAGATCGTC 58.176 55.000 0.00 0.00 0.00 4.20
2957 4378 1.073444 AGATAGCCCGGTAGATCGTCA 59.927 52.381 0.00 0.00 0.00 4.35
2958 4379 2.093106 GATAGCCCGGTAGATCGTCAT 58.907 52.381 0.00 0.00 0.00 3.06
2959 4380 1.991121 TAGCCCGGTAGATCGTCATT 58.009 50.000 0.00 0.00 0.00 2.57
2960 4381 1.991121 AGCCCGGTAGATCGTCATTA 58.009 50.000 0.00 0.00 0.00 1.90
2961 4382 2.526432 AGCCCGGTAGATCGTCATTAT 58.474 47.619 0.00 0.00 0.00 1.28
2962 4383 2.897969 AGCCCGGTAGATCGTCATTATT 59.102 45.455 0.00 0.00 0.00 1.40
2963 4384 2.993899 GCCCGGTAGATCGTCATTATTG 59.006 50.000 0.00 0.00 0.00 1.90
2964 4385 3.554337 GCCCGGTAGATCGTCATTATTGT 60.554 47.826 0.00 0.00 0.00 2.71
2965 4386 4.321452 GCCCGGTAGATCGTCATTATTGTA 60.321 45.833 0.00 0.00 0.00 2.41
2966 4387 5.623824 GCCCGGTAGATCGTCATTATTGTAT 60.624 44.000 0.00 0.00 0.00 2.29
2967 4388 6.034591 CCCGGTAGATCGTCATTATTGTATC 58.965 44.000 0.00 0.00 0.00 2.24
2968 4389 6.127703 CCCGGTAGATCGTCATTATTGTATCT 60.128 42.308 0.00 0.00 0.00 1.98
2969 4390 7.066645 CCCGGTAGATCGTCATTATTGTATCTA 59.933 40.741 0.00 0.00 0.00 1.98
2970 4391 8.456471 CCGGTAGATCGTCATTATTGTATCTAA 58.544 37.037 0.00 0.00 30.15 2.10
2971 4392 9.836076 CGGTAGATCGTCATTATTGTATCTAAA 57.164 33.333 0.00 0.00 30.15 1.85
3094 4594 6.098695 TGTTAGAGTACGTAATGGGCCTAATT 59.901 38.462 4.53 6.05 0.00 1.40
3255 7472 3.721706 CTTCCCTCTTGCCCGGCT 61.722 66.667 11.61 0.00 0.00 5.52
3317 7534 2.028876 TCTAGCAGCGCCATAACAGTA 58.971 47.619 2.29 0.00 0.00 2.74
3318 7535 2.628178 TCTAGCAGCGCCATAACAGTAT 59.372 45.455 2.29 0.00 0.00 2.12
3319 7536 3.824443 TCTAGCAGCGCCATAACAGTATA 59.176 43.478 2.29 0.00 0.00 1.47
3528 7746 9.589111 CATATTTGATCACATTCACAAATTCCA 57.411 29.630 0.00 0.00 41.23 3.53
3539 7757 7.598493 ACATTCACAAATTCCAAATTAAGACCG 59.402 33.333 0.00 0.00 0.00 4.79
3563 7781 7.320399 CGCCATACATGAATACTGAAGGTATA 58.680 38.462 0.00 0.00 39.94 1.47
3672 7890 5.220024 GCTTGTGCGTAAATTTAAGCATGAC 60.220 40.000 31.80 22.62 46.59 3.06
3673 7891 5.363979 TGTGCGTAAATTTAAGCATGACA 57.636 34.783 31.80 24.36 46.59 3.58
3674 7892 5.763088 TGTGCGTAAATTTAAGCATGACAA 58.237 33.333 31.80 17.58 46.59 3.18
3830 8051 0.391130 GCTGTGCCCTACAATCGACA 60.391 55.000 0.00 0.00 39.20 4.35
4021 8242 7.441017 ACAAACAATTTATTAGCTCAGCCAAA 58.559 30.769 0.00 0.00 0.00 3.28
4050 8271 6.551227 TGGTAGAGCAGTCACATCTAATATGT 59.449 38.462 0.00 0.00 0.00 2.29
4095 8316 2.164219 CCAAATGGTGATGCACTGTACC 59.836 50.000 0.00 0.00 34.40 3.34
4132 8353 8.693504 CAGTATAAACATCAACTTTTGCACAAG 58.306 33.333 11.05 11.05 0.00 3.16
4504 9333 8.925700 TGTTGATATGTATATCGATGCTTTGTC 58.074 33.333 8.54 0.00 41.55 3.18
5078 9923 4.844349 AGAGGCCACAGAATAAAAGCTA 57.156 40.909 5.01 0.00 0.00 3.32
5118 9963 8.773404 ATTGATTTTACTTTGTACTACTCGCT 57.227 30.769 0.00 0.00 0.00 4.93
5119 9964 7.807687 TGATTTTACTTTGTACTACTCGCTC 57.192 36.000 0.00 0.00 0.00 5.03
5120 9965 7.600065 TGATTTTACTTTGTACTACTCGCTCT 58.400 34.615 0.00 0.00 0.00 4.09
5121 9966 7.541091 TGATTTTACTTTGTACTACTCGCTCTG 59.459 37.037 0.00 0.00 0.00 3.35
5122 9967 5.954296 TTACTTTGTACTACTCGCTCTGT 57.046 39.130 0.00 0.00 0.00 3.41
5123 9968 4.850347 ACTTTGTACTACTCGCTCTGTT 57.150 40.909 0.00 0.00 0.00 3.16
5124 9969 4.796369 ACTTTGTACTACTCGCTCTGTTC 58.204 43.478 0.00 0.00 0.00 3.18
5125 9970 3.844577 TTGTACTACTCGCTCTGTTCC 57.155 47.619 0.00 0.00 0.00 3.62
5126 9971 3.069079 TGTACTACTCGCTCTGTTCCT 57.931 47.619 0.00 0.00 0.00 3.36
5127 9972 4.212143 TGTACTACTCGCTCTGTTCCTA 57.788 45.455 0.00 0.00 0.00 2.94
5128 9973 4.190001 TGTACTACTCGCTCTGTTCCTAG 58.810 47.826 0.00 0.00 0.00 3.02
5129 9974 3.630892 ACTACTCGCTCTGTTCCTAGA 57.369 47.619 0.00 0.00 0.00 2.43
5130 9975 3.272581 ACTACTCGCTCTGTTCCTAGAC 58.727 50.000 0.00 0.00 0.00 2.59
5131 9976 2.201921 ACTCGCTCTGTTCCTAGACA 57.798 50.000 0.00 0.00 0.00 3.41
5132 9977 2.729194 ACTCGCTCTGTTCCTAGACAT 58.271 47.619 0.00 0.00 0.00 3.06
5133 9978 3.887352 ACTCGCTCTGTTCCTAGACATA 58.113 45.455 0.00 0.00 0.00 2.29
5134 9979 4.270834 ACTCGCTCTGTTCCTAGACATAA 58.729 43.478 0.00 0.00 0.00 1.90
5135 9980 4.336993 ACTCGCTCTGTTCCTAGACATAAG 59.663 45.833 0.00 0.00 0.00 1.73
5136 9981 4.270834 TCGCTCTGTTCCTAGACATAAGT 58.729 43.478 0.00 0.00 0.00 2.24
5137 9982 4.335874 TCGCTCTGTTCCTAGACATAAGTC 59.664 45.833 0.00 0.00 45.31 3.01
5169 10014 8.307483 AGAGATTCCAATATGAACTACATACGG 58.693 37.037 0.00 0.00 43.12 4.02
5170 10015 8.190326 AGATTCCAATATGAACTACATACGGA 57.810 34.615 0.00 0.00 43.12 4.69
5171 10016 8.307483 AGATTCCAATATGAACTACATACGGAG 58.693 37.037 0.00 0.00 42.33 4.63
5172 10017 5.779922 TCCAATATGAACTACATACGGAGC 58.220 41.667 0.00 0.00 43.12 4.70
5173 10018 5.303333 TCCAATATGAACTACATACGGAGCA 59.697 40.000 0.00 0.00 43.12 4.26
5174 10019 5.989168 CCAATATGAACTACATACGGAGCAA 59.011 40.000 0.00 0.00 43.12 3.91
5175 10020 6.481976 CCAATATGAACTACATACGGAGCAAA 59.518 38.462 0.00 0.00 43.12 3.68
5176 10021 7.011950 CCAATATGAACTACATACGGAGCAAAA 59.988 37.037 0.00 0.00 43.12 2.44
5177 10022 8.559536 CAATATGAACTACATACGGAGCAAAAT 58.440 33.333 0.00 0.00 43.12 1.82
5178 10023 5.794687 TGAACTACATACGGAGCAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
5179 10024 5.483811 TGAACTACATACGGAGCAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
5180 10025 5.580691 TGAACTACATACGGAGCAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
5181 10026 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
5182 10027 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
5183 10028 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
5184 10029 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
5185 10030 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
5186 10031 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
5187 10032 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
5188 10033 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
5189 10034 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5190 10035 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
5191 10036 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5219 10064 8.997621 AAAAATGCGTCTATATACATCCGTAT 57.002 30.769 0.00 0.00 41.34 3.06
5316 10161 9.185192 CTATTGTCCAATGTTTCTCTCAAAAAC 57.815 33.333 2.80 0.00 37.18 2.43
5595 10801 4.568359 TCACTCAGCGCAATCTTAAGATTC 59.432 41.667 24.72 18.14 42.41 2.52
5640 10846 4.019792 TCTGAAGCCAAGTTGCAATCTA 57.980 40.909 0.59 0.00 0.00 1.98
5643 10849 5.477984 TCTGAAGCCAAGTTGCAATCTAAAT 59.522 36.000 0.59 0.00 0.00 1.40
5716 10922 4.647424 TTAGGTTGAACTTTGGCAAGTG 57.353 40.909 0.00 0.18 42.89 3.16
5717 10923 2.456577 AGGTTGAACTTTGGCAAGTGT 58.543 42.857 0.00 0.86 42.89 3.55
5792 10998 4.853924 AAGCATCCCAGTTAAACAAGTG 57.146 40.909 0.00 0.00 0.00 3.16
5794 11000 2.668279 GCATCCCAGTTAAACAAGTGCG 60.668 50.000 0.00 0.00 0.00 5.34
5798 11004 3.135994 CCCAGTTAAACAAGTGCGTACT 58.864 45.455 0.00 0.00 39.32 2.73
5808 11014 2.256117 AGTGCGTACTGAAAAAGGCT 57.744 45.000 4.99 0.00 35.34 4.58
5840 11046 7.770433 CCTGCTATATATATTAAGCAAGCCACA 59.230 37.037 17.08 0.00 43.85 4.17
5871 11077 1.407618 GGTCCAACAAAGGTTCACACC 59.592 52.381 0.00 0.00 44.67 4.16
5880 11086 2.861364 GGTTCACACCACACACACA 58.139 52.632 0.00 0.00 43.61 3.72
5881 11087 0.450184 GGTTCACACCACACACACAC 59.550 55.000 0.00 0.00 43.61 3.82
5882 11088 1.160989 GTTCACACCACACACACACA 58.839 50.000 0.00 0.00 0.00 3.72
5883 11089 1.135803 GTTCACACCACACACACACAC 60.136 52.381 0.00 0.00 0.00 3.82
5884 11090 0.035458 TCACACCACACACACACACA 59.965 50.000 0.00 0.00 0.00 3.72
5885 11091 0.167908 CACACCACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
5886 11092 0.250510 ACACCACACACACACACACA 60.251 50.000 0.00 0.00 0.00 3.72
5887 11093 0.167908 CACCACACACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
5888 11094 0.250510 ACCACACACACACACACACA 60.251 50.000 0.00 0.00 0.00 3.72
5930 11136 2.906389 ACAGACATGGTTCAAGAGGCTA 59.094 45.455 0.00 0.00 0.00 3.93
6023 11229 5.201243 AGGCATTTTAGGTAGAATTCCCAC 58.799 41.667 0.65 0.37 0.00 4.61
6103 11310 5.992217 GCATGTTTCTATAACAGGAGTAGGG 59.008 44.000 6.50 0.00 34.22 3.53
6240 11447 0.819259 GCTGTTCACTTCAGGGCACA 60.819 55.000 0.00 0.00 33.98 4.57
6244 11451 1.732259 GTTCACTTCAGGGCACATACG 59.268 52.381 0.00 0.00 0.00 3.06
6291 11498 1.704628 TCTGCAGGGACCAATGAGAAA 59.295 47.619 15.13 0.00 0.00 2.52
6400 11607 8.257830 ACGATATTTTCAGGAAGAAAGAAGAC 57.742 34.615 0.00 0.00 46.24 3.01
6466 11673 4.511527 AGATGCAGACTCCATAACTTGTG 58.488 43.478 0.00 0.00 0.00 3.33
6469 11676 5.675684 TGCAGACTCCATAACTTGTGATA 57.324 39.130 0.00 0.00 0.00 2.15
6509 11718 0.687920 TGATGCAGGTGGTACCGAAA 59.312 50.000 7.57 0.00 44.90 3.46
6519 11728 3.248363 GGTGGTACCGAAACAAACAGTAC 59.752 47.826 7.57 0.00 34.01 2.73
6561 11776 2.635915 AGTTCCTTGTCGAACCATGGTA 59.364 45.455 20.12 0.00 42.63 3.25
6600 11815 3.797353 ATCGACATGGCGGCCCTT 61.797 61.111 23.19 0.33 0.00 3.95
6601 11816 4.776322 TCGACATGGCGGCCCTTG 62.776 66.667 23.19 16.36 40.97 3.61
6606 11821 3.965258 ATGGCGGCCCTTGTGTCA 61.965 61.111 17.97 0.00 0.00 3.58
6694 11909 1.896220 GTCATGTGACTCCCTTGCAA 58.104 50.000 0.00 0.00 41.65 4.08
6727 11942 0.031857 ATCCTCTGAGCTGCGAATCG 59.968 55.000 0.00 0.00 0.00 3.34
6728 11943 1.140589 CCTCTGAGCTGCGAATCGT 59.859 57.895 4.07 0.00 0.00 3.73
6729 11944 0.459237 CCTCTGAGCTGCGAATCGTT 60.459 55.000 4.07 0.00 0.00 3.85
6730 11945 1.202302 CCTCTGAGCTGCGAATCGTTA 60.202 52.381 4.07 0.00 0.00 3.18
6731 11946 2.115595 CTCTGAGCTGCGAATCGTTAG 58.884 52.381 4.07 4.65 0.00 2.34
6732 11947 0.574454 CTGAGCTGCGAATCGTTAGC 59.426 55.000 20.38 20.38 38.62 3.09
6733 11948 0.108851 TGAGCTGCGAATCGTTAGCA 60.109 50.000 26.19 9.62 39.91 3.49
6734 11949 1.212616 GAGCTGCGAATCGTTAGCAT 58.787 50.000 26.19 16.03 40.46 3.79
6735 11950 1.191204 GAGCTGCGAATCGTTAGCATC 59.809 52.381 26.19 18.96 40.46 3.91
6736 11951 0.930310 GCTGCGAATCGTTAGCATCA 59.070 50.000 22.08 3.56 40.46 3.07
6737 11952 1.528586 GCTGCGAATCGTTAGCATCAT 59.471 47.619 22.08 0.00 40.46 2.45
6738 11953 2.731451 GCTGCGAATCGTTAGCATCATA 59.269 45.455 22.08 0.00 40.46 2.15
6739 11954 3.181536 GCTGCGAATCGTTAGCATCATAG 60.182 47.826 22.08 0.00 40.46 2.23
6740 11955 3.317150 TGCGAATCGTTAGCATCATAGG 58.683 45.455 4.07 0.00 36.35 2.57
6741 11956 3.005367 TGCGAATCGTTAGCATCATAGGA 59.995 43.478 4.07 0.00 36.35 2.94
6809 12027 3.188048 CGTCTCTCTGCTTGCTCAAATTT 59.812 43.478 0.00 0.00 0.00 1.82
6824 12042 2.752354 CAAATTTGTCCCACCTCGCATA 59.248 45.455 10.15 0.00 0.00 3.14
6839 12067 4.396166 CCTCGCATATTCTTTTCAGTTGGT 59.604 41.667 0.00 0.00 0.00 3.67
6870 12098 3.005367 CGTATGGGTCCTTTTTGCAGTTT 59.995 43.478 0.00 0.00 0.00 2.66
6982 12236 1.780860 GCAACAAATTCGCAGTCACAC 59.219 47.619 0.00 0.00 0.00 3.82
7008 12263 3.113824 AGTCTTCCTCTGCCTGATGATT 58.886 45.455 0.00 0.00 0.00 2.57
7009 12264 4.293494 AGTCTTCCTCTGCCTGATGATTA 58.707 43.478 0.00 0.00 0.00 1.75
7010 12265 4.906664 AGTCTTCCTCTGCCTGATGATTAT 59.093 41.667 0.00 0.00 0.00 1.28
7011 12266 4.996122 GTCTTCCTCTGCCTGATGATTATG 59.004 45.833 0.00 0.00 0.00 1.90
7012 12267 4.903649 TCTTCCTCTGCCTGATGATTATGA 59.096 41.667 0.00 0.00 0.00 2.15
7013 12268 5.546887 TCTTCCTCTGCCTGATGATTATGAT 59.453 40.000 0.00 0.00 0.00 2.45
7030 12285 8.464404 TGATTATGATACTACTAATACCGCCAC 58.536 37.037 0.00 0.00 0.00 5.01
7032 12287 4.472496 TGATACTACTAATACCGCCACCA 58.528 43.478 0.00 0.00 0.00 4.17
7065 12396 6.786207 TCATAGTGAGTACAAGACATTCTCG 58.214 40.000 0.00 0.00 0.00 4.04
7066 12397 4.442375 AGTGAGTACAAGACATTCTCGG 57.558 45.455 0.00 0.00 0.00 4.63
7075 12406 2.359900 AGACATTCTCGGACAATTGCC 58.640 47.619 5.05 7.08 0.00 4.52
7101 12432 3.393426 AGCTTCCATCCATTTCCATGT 57.607 42.857 0.00 0.00 0.00 3.21
7102 12433 3.028850 AGCTTCCATCCATTTCCATGTG 58.971 45.455 0.00 0.00 0.00 3.21
7104 12435 3.181483 GCTTCCATCCATTTCCATGTGAC 60.181 47.826 0.00 0.00 0.00 3.67
7116 12447 3.122480 TCCATGTGACATCCTGGGTTAT 58.878 45.455 4.05 0.00 0.00 1.89
7151 12482 1.597742 TGCTCAAAGGAGTGCACTTC 58.402 50.000 22.65 20.35 43.37 3.01
7154 12485 2.149578 CTCAAAGGAGTGCACTTCCTG 58.850 52.381 27.78 22.22 36.36 3.86
7158 12489 2.360475 GAGTGCACTTCCTGCCCC 60.360 66.667 22.65 0.92 46.51 5.80
7159 12490 2.856000 AGTGCACTTCCTGCCCCT 60.856 61.111 15.25 0.00 46.51 4.79
7160 12491 2.360475 GTGCACTTCCTGCCCCTC 60.360 66.667 10.32 0.00 46.51 4.30
7161 12492 4.020617 TGCACTTCCTGCCCCTCG 62.021 66.667 0.00 0.00 46.51 4.63
7199 13633 1.538687 AACTTGCAGGCAGGCCATTC 61.539 55.000 13.63 1.47 38.92 2.67
7205 13639 2.011044 AGGCAGGCCATTCCCATCT 61.011 57.895 13.63 0.00 38.92 2.90
7217 13651 2.568546 TCCCATCTACCACATCACCT 57.431 50.000 0.00 0.00 0.00 4.00
7230 13664 2.567615 ACATCACCTCGCTAGTCCTTTT 59.432 45.455 0.00 0.00 0.00 2.27
7250 13684 2.125350 CGGAGGTGCTGAAGAGGC 60.125 66.667 0.00 0.00 0.00 4.70
7281 13715 3.733443 AAGACATGTGTTTCTTTGGGC 57.267 42.857 1.15 0.00 0.00 5.36
7288 13722 2.197324 TTTCTTTGGGCGGGCTGT 59.803 55.556 0.26 0.00 0.00 4.40
7289 13723 2.199652 TTTCTTTGGGCGGGCTGTG 61.200 57.895 0.26 0.00 0.00 3.66
7291 13725 3.365265 CTTTGGGCGGGCTGTGAC 61.365 66.667 0.26 0.00 0.00 3.67
7326 13760 4.040339 AGGAAAAATGCAAGGTTAACTGGG 59.960 41.667 5.42 0.00 0.00 4.45
7327 13761 4.039852 GGAAAAATGCAAGGTTAACTGGGA 59.960 41.667 5.42 0.00 0.00 4.37
7328 13762 5.454045 GGAAAAATGCAAGGTTAACTGGGAA 60.454 40.000 5.42 0.00 0.00 3.97
7329 13763 5.823861 AAAATGCAAGGTTAACTGGGAAT 57.176 34.783 5.42 0.00 0.00 3.01
7330 13764 5.823861 AAATGCAAGGTTAACTGGGAATT 57.176 34.783 5.42 0.00 0.00 2.17
7331 13765 5.823861 AATGCAAGGTTAACTGGGAATTT 57.176 34.783 5.42 0.00 0.00 1.82
7332 13766 4.599047 TGCAAGGTTAACTGGGAATTTG 57.401 40.909 5.42 1.61 0.00 2.32
7333 13767 3.323403 TGCAAGGTTAACTGGGAATTTGG 59.677 43.478 5.42 0.00 0.00 3.28
7334 13768 3.576550 GCAAGGTTAACTGGGAATTTGGA 59.423 43.478 5.42 0.00 0.00 3.53
7335 13769 4.560716 GCAAGGTTAACTGGGAATTTGGAC 60.561 45.833 5.42 0.00 0.00 4.02
7336 13770 4.741928 AGGTTAACTGGGAATTTGGACT 57.258 40.909 5.42 0.00 0.00 3.85
7337 13771 5.074746 AGGTTAACTGGGAATTTGGACTT 57.925 39.130 5.42 0.00 0.00 3.01
7338 13772 6.208840 AGGTTAACTGGGAATTTGGACTTA 57.791 37.500 5.42 0.00 0.00 2.24
7339 13773 6.616577 AGGTTAACTGGGAATTTGGACTTAA 58.383 36.000 5.42 0.00 0.00 1.85
7340 13774 7.070629 AGGTTAACTGGGAATTTGGACTTAAA 58.929 34.615 5.42 0.00 0.00 1.52
7341 13775 7.014905 AGGTTAACTGGGAATTTGGACTTAAAC 59.985 37.037 5.42 0.00 0.00 2.01
7342 13776 7.201929 GGTTAACTGGGAATTTGGACTTAAACA 60.202 37.037 5.42 0.00 0.00 2.83
7343 13777 6.800072 AACTGGGAATTTGGACTTAAACAA 57.200 33.333 0.00 0.00 0.00 2.83
7344 13778 6.405278 ACTGGGAATTTGGACTTAAACAAG 57.595 37.500 0.00 0.00 0.00 3.16
7345 13779 5.897250 ACTGGGAATTTGGACTTAAACAAGT 59.103 36.000 0.00 0.00 35.34 3.16
7346 13780 6.382859 ACTGGGAATTTGGACTTAAACAAGTT 59.617 34.615 0.00 0.00 32.22 2.66
7347 13781 7.093068 ACTGGGAATTTGGACTTAAACAAGTTT 60.093 33.333 3.47 3.47 36.63 2.66
7348 13782 7.044798 TGGGAATTTGGACTTAAACAAGTTTG 58.955 34.615 8.37 0.00 34.23 2.93
7349 13783 6.018262 GGGAATTTGGACTTAAACAAGTTTGC 60.018 38.462 8.37 0.00 34.23 3.68
7350 13784 6.018262 GGAATTTGGACTTAAACAAGTTTGCC 60.018 38.462 8.37 5.43 34.23 4.52
7351 13785 5.407407 TTTGGACTTAAACAAGTTTGCCA 57.593 34.783 8.37 7.59 34.23 4.92
7352 13786 4.379339 TGGACTTAAACAAGTTTGCCAC 57.621 40.909 8.37 0.00 34.23 5.01
7353 13787 4.020543 TGGACTTAAACAAGTTTGCCACT 58.979 39.130 8.37 0.00 37.30 4.00
7354 13788 4.142271 TGGACTTAAACAAGTTTGCCACTG 60.142 41.667 8.37 0.00 35.12 3.66
7355 13789 3.780902 ACTTAAACAAGTTTGCCACTGC 58.219 40.909 8.37 0.00 35.12 4.40
7356 13790 3.447229 ACTTAAACAAGTTTGCCACTGCT 59.553 39.130 8.37 0.00 35.12 4.24
7357 13791 2.584492 AAACAAGTTTGCCACTGCTC 57.416 45.000 0.00 0.00 35.12 4.26
7358 13792 1.767759 AACAAGTTTGCCACTGCTCT 58.232 45.000 0.00 0.00 35.12 4.09
7359 13793 1.312815 ACAAGTTTGCCACTGCTCTC 58.687 50.000 0.00 0.00 35.12 3.20
7360 13794 0.595095 CAAGTTTGCCACTGCTCTCC 59.405 55.000 0.00 0.00 35.12 3.71
7361 13795 0.183492 AAGTTTGCCACTGCTCTCCA 59.817 50.000 0.00 0.00 35.12 3.86
7362 13796 0.536006 AGTTTGCCACTGCTCTCCAC 60.536 55.000 0.00 0.00 38.71 4.02
7363 13797 1.228245 TTTGCCACTGCTCTCCACC 60.228 57.895 0.00 0.00 38.71 4.61
7364 13798 1.708993 TTTGCCACTGCTCTCCACCT 61.709 55.000 0.00 0.00 38.71 4.00
7365 13799 2.116983 TTGCCACTGCTCTCCACCTC 62.117 60.000 0.00 0.00 38.71 3.85
7366 13800 2.985456 CCACTGCTCTCCACCTCC 59.015 66.667 0.00 0.00 0.00 4.30
7367 13801 1.915266 CCACTGCTCTCCACCTCCA 60.915 63.158 0.00 0.00 0.00 3.86
7368 13802 1.483595 CCACTGCTCTCCACCTCCAA 61.484 60.000 0.00 0.00 0.00 3.53
7369 13803 0.617413 CACTGCTCTCCACCTCCAAT 59.383 55.000 0.00 0.00 0.00 3.16
7370 13804 0.617413 ACTGCTCTCCACCTCCAATG 59.383 55.000 0.00 0.00 0.00 2.82
7371 13805 0.107312 CTGCTCTCCACCTCCAATGG 60.107 60.000 0.00 0.00 38.71 3.16
7372 13806 1.452833 GCTCTCCACCTCCAATGGC 60.453 63.158 0.00 0.00 37.13 4.40
7373 13807 1.919600 GCTCTCCACCTCCAATGGCT 61.920 60.000 0.00 0.00 37.13 4.75
7374 13808 0.622665 CTCTCCACCTCCAATGGCTT 59.377 55.000 0.00 0.00 37.13 4.35
7375 13809 1.005215 CTCTCCACCTCCAATGGCTTT 59.995 52.381 0.00 0.00 37.13 3.51
7376 13810 1.180029 CTCCACCTCCAATGGCTTTG 58.820 55.000 6.16 6.16 37.13 2.77
7377 13811 0.776810 TCCACCTCCAATGGCTTTGA 59.223 50.000 14.11 0.93 37.53 2.69
7378 13812 1.358787 TCCACCTCCAATGGCTTTGAT 59.641 47.619 14.11 0.00 37.53 2.57
7379 13813 2.181975 CCACCTCCAATGGCTTTGATT 58.818 47.619 14.11 0.00 37.53 2.57
7380 13814 2.568509 CCACCTCCAATGGCTTTGATTT 59.431 45.455 14.11 0.00 37.53 2.17
7381 13815 3.592059 CACCTCCAATGGCTTTGATTTG 58.408 45.455 14.11 3.01 37.53 2.32
7382 13816 3.258872 CACCTCCAATGGCTTTGATTTGA 59.741 43.478 14.11 2.82 37.53 2.69
7383 13817 4.081309 CACCTCCAATGGCTTTGATTTGAT 60.081 41.667 14.11 0.00 37.53 2.57
7384 13818 4.533311 ACCTCCAATGGCTTTGATTTGATT 59.467 37.500 14.11 0.00 37.53 2.57
7385 13819 4.873827 CCTCCAATGGCTTTGATTTGATTG 59.126 41.667 14.11 0.00 37.53 2.67
7386 13820 4.834534 TCCAATGGCTTTGATTTGATTGG 58.165 39.130 14.11 7.73 40.75 3.16
7387 13821 4.286549 TCCAATGGCTTTGATTTGATTGGT 59.713 37.500 14.11 0.00 40.42 3.67
7388 13822 4.632688 CCAATGGCTTTGATTTGATTGGTC 59.367 41.667 14.11 0.00 37.53 4.02
7389 13823 3.959535 TGGCTTTGATTTGATTGGTCC 57.040 42.857 0.00 0.00 0.00 4.46
7390 13824 2.230992 TGGCTTTGATTTGATTGGTCCG 59.769 45.455 0.00 0.00 0.00 4.79
7391 13825 2.491693 GGCTTTGATTTGATTGGTCCGA 59.508 45.455 0.00 0.00 0.00 4.55
7392 13826 3.428045 GGCTTTGATTTGATTGGTCCGAG 60.428 47.826 0.00 0.00 0.00 4.63
7393 13827 3.762779 CTTTGATTTGATTGGTCCGAGC 58.237 45.455 0.00 0.00 0.00 5.03
7394 13828 1.750193 TGATTTGATTGGTCCGAGCC 58.250 50.000 0.00 0.00 0.00 4.70
7395 13829 1.004161 TGATTTGATTGGTCCGAGCCA 59.996 47.619 0.00 0.00 36.62 4.75
7396 13830 2.301346 GATTTGATTGGTCCGAGCCAT 58.699 47.619 0.00 0.00 38.48 4.40
7397 13831 1.750193 TTTGATTGGTCCGAGCCATC 58.250 50.000 5.00 5.00 38.48 3.51
7398 13832 0.107214 TTGATTGGTCCGAGCCATCC 60.107 55.000 8.69 0.00 38.48 3.51
7399 13833 1.271127 TGATTGGTCCGAGCCATCCA 61.271 55.000 8.69 0.00 38.48 3.41
7400 13834 0.107214 GATTGGTCCGAGCCATCCAA 60.107 55.000 1.10 0.00 42.81 3.53
7401 13835 0.107017 ATTGGTCCGAGCCATCCAAG 60.107 55.000 0.00 0.00 42.09 3.61
7402 13836 2.514824 GGTCCGAGCCATCCAAGC 60.515 66.667 0.00 0.00 0.00 4.01
7403 13837 2.514824 GTCCGAGCCATCCAAGCC 60.515 66.667 0.00 0.00 0.00 4.35
7404 13838 2.688666 TCCGAGCCATCCAAGCCT 60.689 61.111 0.00 0.00 0.00 4.58
7405 13839 2.273449 CCGAGCCATCCAAGCCTT 59.727 61.111 0.00 0.00 0.00 4.35
7406 13840 2.117156 CCGAGCCATCCAAGCCTTG 61.117 63.158 0.00 0.00 0.00 3.61
7414 13848 2.283173 CCAAGCCTTGGTGGGGTC 60.283 66.667 15.63 0.00 45.93 4.46
7415 13849 2.520458 CAAGCCTTGGTGGGGTCA 59.480 61.111 0.00 0.00 35.90 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 143 9.219603 CTTATCCAATTCTTGTCTTGTCTACAA 57.780 33.333 0.00 0.00 35.61 2.41
146 147 7.911651 TCTCTTATCCAATTCTTGTCTTGTCT 58.088 34.615 0.00 0.00 0.00 3.41
156 157 9.206690 TGTCTCAGTTATCTCTTATCCAATTCT 57.793 33.333 0.00 0.00 0.00 2.40
175 176 6.805271 CCACTAATGCTCAAAAATTGTCTCAG 59.195 38.462 0.00 0.00 0.00 3.35
182 183 4.685628 CGCAACCACTAATGCTCAAAAATT 59.314 37.500 0.00 0.00 40.39 1.82
213 214 0.239879 CGTCGGTTGGTTTGGATTGG 59.760 55.000 0.00 0.00 0.00 3.16
232 233 3.303495 CGATCACAATGACACGTCCTTAC 59.697 47.826 0.00 0.00 0.00 2.34
233 234 3.507786 CGATCACAATGACACGTCCTTA 58.492 45.455 0.00 0.00 0.00 2.69
234 235 2.337583 CGATCACAATGACACGTCCTT 58.662 47.619 0.00 0.00 0.00 3.36
235 236 1.996292 CGATCACAATGACACGTCCT 58.004 50.000 0.00 0.00 0.00 3.85
236 237 0.370273 GCGATCACAATGACACGTCC 59.630 55.000 0.00 0.00 34.03 4.79
237 238 1.059692 CTGCGATCACAATGACACGTC 59.940 52.381 0.00 0.00 34.03 4.34
238 239 1.070821 CTGCGATCACAATGACACGT 58.929 50.000 0.00 0.00 34.03 4.49
239 240 1.059692 GTCTGCGATCACAATGACACG 59.940 52.381 0.00 0.00 34.41 4.49
240 241 2.341257 AGTCTGCGATCACAATGACAC 58.659 47.619 6.06 0.00 0.00 3.67
241 242 2.610433 GAGTCTGCGATCACAATGACA 58.390 47.619 6.06 0.00 0.00 3.58
242 243 1.929836 GGAGTCTGCGATCACAATGAC 59.070 52.381 0.00 0.00 0.00 3.06
248 249 2.100605 AAAAGGGAGTCTGCGATCAC 57.899 50.000 0.00 0.00 0.00 3.06
324 325 1.885887 CACCCATTGAACGTTGGACAT 59.114 47.619 5.00 0.00 34.81 3.06
334 336 5.570205 TTTACCAGTACTCACCCATTGAA 57.430 39.130 0.00 0.00 32.21 2.69
337 339 5.313280 TGTTTTACCAGTACTCACCCATT 57.687 39.130 0.00 0.00 0.00 3.16
340 342 6.453926 TTTTTGTTTTACCAGTACTCACCC 57.546 37.500 0.00 0.00 0.00 4.61
367 1501 1.618343 CCCGCCTTCCAAAAGTGATTT 59.382 47.619 0.00 0.00 0.00 2.17
370 1504 1.228429 CCCCGCCTTCCAAAAGTGA 60.228 57.895 0.00 0.00 0.00 3.41
371 1505 1.524008 GACCCCGCCTTCCAAAAGTG 61.524 60.000 0.00 0.00 0.00 3.16
372 1506 1.228459 GACCCCGCCTTCCAAAAGT 60.228 57.895 0.00 0.00 0.00 2.66
373 1507 2.332654 CGACCCCGCCTTCCAAAAG 61.333 63.158 0.00 0.00 0.00 2.27
374 1508 2.281900 CGACCCCGCCTTCCAAAA 60.282 61.111 0.00 0.00 0.00 2.44
397 1531 4.148825 CTCGTGGAGGCGAAGGGG 62.149 72.222 0.00 0.00 40.57 4.79
398 1532 4.148825 CCTCGTGGAGGCGAAGGG 62.149 72.222 0.00 0.00 43.29 3.95
406 1540 1.903877 ATTGGTGGAGCCTCGTGGAG 61.904 60.000 7.92 0.00 38.35 3.86
407 1541 1.918293 ATTGGTGGAGCCTCGTGGA 60.918 57.895 7.92 0.00 38.35 4.02
408 1542 1.746615 CATTGGTGGAGCCTCGTGG 60.747 63.158 0.00 0.00 38.35 4.94
409 1543 2.401766 GCATTGGTGGAGCCTCGTG 61.402 63.158 0.00 0.00 38.35 4.35
410 1544 2.045926 GCATTGGTGGAGCCTCGT 60.046 61.111 0.00 0.00 38.35 4.18
411 1545 3.197790 CGCATTGGTGGAGCCTCG 61.198 66.667 0.00 0.00 38.35 4.63
412 1546 3.512516 GCGCATTGGTGGAGCCTC 61.513 66.667 0.30 0.00 38.35 4.70
413 1547 4.349503 TGCGCATTGGTGGAGCCT 62.350 61.111 5.66 0.00 38.35 4.58
414 1548 4.120331 GTGCGCATTGGTGGAGCC 62.120 66.667 15.91 0.00 37.90 4.70
415 1549 3.364441 TGTGCGCATTGGTGGAGC 61.364 61.111 15.91 0.00 0.00 4.70
416 1550 2.562912 GTGTGCGCATTGGTGGAG 59.437 61.111 15.91 0.00 0.00 3.86
417 1551 2.983030 GGTGTGCGCATTGGTGGA 60.983 61.111 15.91 0.00 0.00 4.02
418 1552 4.403137 CGGTGTGCGCATTGGTGG 62.403 66.667 15.91 0.00 0.00 4.61
419 1553 2.902419 TTCGGTGTGCGCATTGGTG 61.902 57.895 15.91 3.01 0.00 4.17
420 1554 2.593148 TTCGGTGTGCGCATTGGT 60.593 55.556 15.91 0.00 0.00 3.67
421 1555 2.126888 GTTCGGTGTGCGCATTGG 60.127 61.111 15.91 3.60 0.00 3.16
422 1556 2.126888 GGTTCGGTGTGCGCATTG 60.127 61.111 15.91 3.84 0.00 2.82
423 1557 3.722295 CGGTTCGGTGTGCGCATT 61.722 61.111 15.91 0.00 0.00 3.56
439 1573 3.376935 AATCAGGGAGCGACTGCCG 62.377 63.158 10.70 7.13 46.84 5.69
440 1574 1.522580 GAATCAGGGAGCGACTGCC 60.523 63.158 8.90 8.90 44.31 4.85
441 1575 1.522580 GGAATCAGGGAGCGACTGC 60.523 63.158 0.00 0.00 43.24 4.40
442 1576 1.144936 GGGAATCAGGGAGCGACTG 59.855 63.158 0.00 0.00 37.30 3.51
443 1577 2.066999 GGGGAATCAGGGAGCGACT 61.067 63.158 0.00 0.00 0.00 4.18
444 1578 1.910580 TTGGGGAATCAGGGAGCGAC 61.911 60.000 0.00 0.00 0.00 5.19
445 1579 1.204786 TTTGGGGAATCAGGGAGCGA 61.205 55.000 0.00 0.00 0.00 4.93
446 1580 1.032114 GTTTGGGGAATCAGGGAGCG 61.032 60.000 0.00 0.00 0.00 5.03
447 1581 0.684479 GGTTTGGGGAATCAGGGAGC 60.684 60.000 0.00 0.00 0.00 4.70
448 1582 0.033109 GGGTTTGGGGAATCAGGGAG 60.033 60.000 0.00 0.00 0.00 4.30
449 1583 1.514864 GGGGTTTGGGGAATCAGGGA 61.515 60.000 0.00 0.00 0.00 4.20
450 1584 1.001631 GGGGTTTGGGGAATCAGGG 59.998 63.158 0.00 0.00 0.00 4.45
451 1585 0.339510 ATGGGGTTTGGGGAATCAGG 59.660 55.000 0.00 0.00 0.00 3.86
452 1586 2.110578 GAATGGGGTTTGGGGAATCAG 58.889 52.381 0.00 0.00 0.00 2.90
453 1587 1.618345 CGAATGGGGTTTGGGGAATCA 60.618 52.381 0.00 0.00 0.00 2.57
454 1588 1.111277 CGAATGGGGTTTGGGGAATC 58.889 55.000 0.00 0.00 0.00 2.52
455 1589 0.975556 GCGAATGGGGTTTGGGGAAT 60.976 55.000 0.00 0.00 0.00 3.01
456 1590 1.608046 GCGAATGGGGTTTGGGGAA 60.608 57.895 0.00 0.00 0.00 3.97
457 1591 2.036572 GCGAATGGGGTTTGGGGA 59.963 61.111 0.00 0.00 0.00 4.81
458 1592 3.074369 GGCGAATGGGGTTTGGGG 61.074 66.667 0.00 0.00 0.00 4.96
459 1593 3.074369 GGGCGAATGGGGTTTGGG 61.074 66.667 0.00 0.00 0.00 4.12
460 1594 3.074369 GGGGCGAATGGGGTTTGG 61.074 66.667 0.00 0.00 0.00 3.28
489 1903 3.787001 GAGGAAGGGGGCGGAGTG 61.787 72.222 0.00 0.00 0.00 3.51
514 1928 4.426313 GTGGGCGGAGGAAAGGGG 62.426 72.222 0.00 0.00 0.00 4.79
515 1929 3.330720 AGTGGGCGGAGGAAAGGG 61.331 66.667 0.00 0.00 0.00 3.95
516 1930 2.269241 GAGTGGGCGGAGGAAAGG 59.731 66.667 0.00 0.00 0.00 3.11
517 1931 2.269241 GGAGTGGGCGGAGGAAAG 59.731 66.667 0.00 0.00 0.00 2.62
518 1932 3.702048 CGGAGTGGGCGGAGGAAA 61.702 66.667 0.00 0.00 0.00 3.13
920 2334 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
1355 2769 2.659063 CCCTCGTCCTGATGCACCA 61.659 63.158 0.00 0.00 0.00 4.17
1412 2826 3.752412 AGTCAATAATGTCGTCGTCGA 57.248 42.857 0.00 0.00 44.12 4.20
1432 2849 4.680237 CTCCCCGTCGCTGCACAA 62.680 66.667 0.00 0.00 0.00 3.33
1495 2912 3.244911 ACTTTGTCATCCCCATCTTCGTT 60.245 43.478 0.00 0.00 0.00 3.85
1556 2973 1.002624 GATTCCAACTCACCGGGCA 60.003 57.895 6.32 0.00 0.00 5.36
1593 3010 0.251916 TGACCGAATCGATTTGCCCT 59.748 50.000 18.46 4.35 0.00 5.19
1608 3025 4.162320 TGATCATTTCCCAGAGTACTGACC 59.838 45.833 0.00 0.00 46.03 4.02
1623 3040 6.506500 AACGAAGATTTCTGCTGATCATTT 57.493 33.333 0.00 0.00 0.00 2.32
1661 3078 0.747283 CCCAGCTCTTGTCATCTGCC 60.747 60.000 0.00 0.00 0.00 4.85
1675 3092 0.475906 ATACAGGCCATCTTCCCAGC 59.524 55.000 5.01 0.00 0.00 4.85
1758 3175 0.683412 TCCTGGGCATCTCATCATCG 59.317 55.000 0.00 0.00 0.00 3.84
1910 3327 2.224967 GCATCCCCCTTCAATAGCTGAT 60.225 50.000 0.00 0.00 32.78 2.90
2021 3438 3.253432 CGATATCATCCGTTCCTCACTCA 59.747 47.826 3.12 0.00 0.00 3.41
2165 3582 3.489355 TCCACATGATTGCAAACTGAGT 58.511 40.909 1.71 0.00 0.00 3.41
2166 3583 3.754850 TCTCCACATGATTGCAAACTGAG 59.245 43.478 1.71 3.41 0.00 3.35
2258 3675 4.911514 ATTCAACTTTTAACGCACCTGT 57.088 36.364 0.00 0.00 0.00 4.00
2451 3872 6.094881 GTGGCTTTGCTAAACCATACTCAATA 59.905 38.462 6.30 0.00 34.04 1.90
2452 3873 5.016173 TGGCTTTGCTAAACCATACTCAAT 58.984 37.500 0.00 0.00 0.00 2.57
2509 3930 5.395768 GCTCTCCTGTTTCTAAAGCTATGGA 60.396 44.000 0.00 0.00 0.00 3.41
2540 3961 6.543465 CCACAAAATAGTGAGAGATGCCATAA 59.457 38.462 0.00 0.00 42.05 1.90
2562 3983 5.177696 GCACTATGTAGCTGTTATAAGCCAC 59.822 44.000 0.00 0.00 44.68 5.01
2631 4052 8.296713 GCCTCACTTTGTTCTGTTTTATTATGA 58.703 33.333 0.00 0.00 0.00 2.15
2636 4057 4.819630 TCGCCTCACTTTGTTCTGTTTTAT 59.180 37.500 0.00 0.00 0.00 1.40
2652 4073 3.610040 TTTCTGAAATAGCTCGCCTCA 57.390 42.857 0.00 0.00 0.00 3.86
2701 4122 7.528675 TGTGGTTAACTAATTAAAGGAGGGTT 58.471 34.615 5.42 0.00 32.04 4.11
2713 4134 5.743636 TCTACCGGTTGTGGTTAACTAAT 57.256 39.130 15.04 0.00 43.56 1.73
2731 4152 8.080417 TGCCTACGTACAATTATGAAGATCTAC 58.920 37.037 0.00 0.00 0.00 2.59
2841 4262 8.665685 AGTCTGCCTAACTACAATTATTTTTCG 58.334 33.333 0.00 0.00 0.00 3.46
2925 4346 8.111545 TCTACCGGGCTATCTATTTAGATACAA 58.888 37.037 6.32 0.00 42.66 2.41
2926 4347 7.636579 TCTACCGGGCTATCTATTTAGATACA 58.363 38.462 6.32 0.00 42.66 2.29
2927 4348 8.694581 ATCTACCGGGCTATCTATTTAGATAC 57.305 38.462 6.32 2.50 42.66 2.24
2928 4349 7.660617 CGATCTACCGGGCTATCTATTTAGATA 59.339 40.741 6.32 7.03 42.66 1.98
2929 4350 6.487331 CGATCTACCGGGCTATCTATTTAGAT 59.513 42.308 6.32 4.96 44.69 1.98
2930 4351 5.821470 CGATCTACCGGGCTATCTATTTAGA 59.179 44.000 6.32 0.00 36.65 2.10
2931 4352 5.589452 ACGATCTACCGGGCTATCTATTTAG 59.411 44.000 6.32 0.00 0.00 1.85
2932 4353 5.503927 ACGATCTACCGGGCTATCTATTTA 58.496 41.667 6.32 0.00 0.00 1.40
2933 4354 4.342359 ACGATCTACCGGGCTATCTATTT 58.658 43.478 6.32 0.00 0.00 1.40
2934 4355 3.946558 GACGATCTACCGGGCTATCTATT 59.053 47.826 6.32 0.00 0.00 1.73
2935 4356 3.054582 TGACGATCTACCGGGCTATCTAT 60.055 47.826 6.32 0.00 0.00 1.98
2936 4357 2.303890 TGACGATCTACCGGGCTATCTA 59.696 50.000 6.32 0.00 0.00 1.98
2937 4358 1.073444 TGACGATCTACCGGGCTATCT 59.927 52.381 6.32 0.00 0.00 1.98
2938 4359 1.531423 TGACGATCTACCGGGCTATC 58.469 55.000 6.32 4.17 0.00 2.08
2939 4360 2.217510 ATGACGATCTACCGGGCTAT 57.782 50.000 6.32 0.00 0.00 2.97
2940 4361 1.991121 AATGACGATCTACCGGGCTA 58.009 50.000 6.32 0.00 0.00 3.93
2941 4362 1.991121 TAATGACGATCTACCGGGCT 58.009 50.000 6.32 0.00 0.00 5.19
2942 4363 2.993899 CAATAATGACGATCTACCGGGC 59.006 50.000 6.32 0.00 0.00 6.13
2943 4364 4.252971 ACAATAATGACGATCTACCGGG 57.747 45.455 6.32 0.00 0.00 5.73
2944 4365 6.853720 AGATACAATAATGACGATCTACCGG 58.146 40.000 0.00 0.00 0.00 5.28
2945 4366 9.836076 TTTAGATACAATAATGACGATCTACCG 57.164 33.333 0.00 0.00 31.89 4.02
2958 4379 9.263446 ACCGGGCTATCTATTTAGATACAATAA 57.737 33.333 6.32 0.00 42.66 1.40
2959 4380 8.834004 ACCGGGCTATCTATTTAGATACAATA 57.166 34.615 6.32 0.00 42.66 1.90
2960 4381 7.735326 ACCGGGCTATCTATTTAGATACAAT 57.265 36.000 6.32 0.00 42.66 2.71
2961 4382 8.111545 TCTACCGGGCTATCTATTTAGATACAA 58.888 37.037 6.32 0.00 42.66 2.41
2962 4383 7.636579 TCTACCGGGCTATCTATTTAGATACA 58.363 38.462 6.32 0.00 42.66 2.29
2963 4384 8.694581 ATCTACCGGGCTATCTATTTAGATAC 57.305 38.462 6.32 2.50 42.66 2.24
2964 4385 7.660617 CGATCTACCGGGCTATCTATTTAGATA 59.339 40.741 6.32 7.03 42.66 1.98
2965 4386 6.487331 CGATCTACCGGGCTATCTATTTAGAT 59.513 42.308 6.32 4.96 44.69 1.98
2966 4387 5.821470 CGATCTACCGGGCTATCTATTTAGA 59.179 44.000 6.32 0.00 36.65 2.10
2967 4388 5.589452 ACGATCTACCGGGCTATCTATTTAG 59.411 44.000 6.32 0.00 0.00 1.85
2968 4389 5.503927 ACGATCTACCGGGCTATCTATTTA 58.496 41.667 6.32 0.00 0.00 1.40
2969 4390 4.342359 ACGATCTACCGGGCTATCTATTT 58.658 43.478 6.32 0.00 0.00 1.40
2970 4391 3.946558 GACGATCTACCGGGCTATCTATT 59.053 47.826 6.32 0.00 0.00 1.73
2971 4392 3.054582 TGACGATCTACCGGGCTATCTAT 60.055 47.826 6.32 0.00 0.00 1.98
2972 4393 2.303890 TGACGATCTACCGGGCTATCTA 59.696 50.000 6.32 0.00 0.00 1.98
2973 4394 1.073444 TGACGATCTACCGGGCTATCT 59.927 52.381 6.32 0.00 0.00 1.98
2974 4395 1.531423 TGACGATCTACCGGGCTATC 58.469 55.000 6.32 4.17 0.00 2.08
2975 4396 2.217510 ATGACGATCTACCGGGCTAT 57.782 50.000 6.32 0.00 0.00 2.97
2976 4397 1.991121 AATGACGATCTACCGGGCTA 58.009 50.000 6.32 0.00 0.00 3.93
2977 4398 1.991121 TAATGACGATCTACCGGGCT 58.009 50.000 6.32 0.00 0.00 5.19
2978 4399 2.993899 CAATAATGACGATCTACCGGGC 59.006 50.000 6.32 0.00 0.00 6.13
2979 4400 4.252971 ACAATAATGACGATCTACCGGG 57.747 45.455 6.32 0.00 0.00 5.73
2980 4401 6.853720 AGATACAATAATGACGATCTACCGG 58.146 40.000 0.00 0.00 0.00 5.28
2981 4402 9.836076 TTTAGATACAATAATGACGATCTACCG 57.164 33.333 0.00 0.00 31.89 4.02
3094 4594 2.280308 ACCCTAAGACTAATGGGCCA 57.720 50.000 9.61 9.61 43.25 5.36
3287 7504 2.726351 GCTGCTAGAAGGAGGGCGT 61.726 63.158 0.00 0.00 33.92 5.68
3318 7535 8.199449 CGTGTAAGGAAATAGGAATTACAGGTA 58.801 37.037 0.00 0.00 37.11 3.08
3319 7536 7.046033 CGTGTAAGGAAATAGGAATTACAGGT 58.954 38.462 0.00 0.00 37.11 4.00
3363 7581 6.793505 AAGAATCAGTTAGTACCGGAAGAT 57.206 37.500 9.46 0.00 0.00 2.40
3374 7592 6.656693 AGGTTGTGATCCAAAGAATCAGTTAG 59.343 38.462 0.00 0.00 34.07 2.34
3379 7597 5.005740 CAGAGGTTGTGATCCAAAGAATCA 58.994 41.667 0.00 0.00 34.07 2.57
3528 7746 6.959639 ATTCATGTATGGCGGTCTTAATTT 57.040 33.333 0.00 0.00 0.00 1.82
3672 7890 3.441572 GTCCATCCTCAGAACAACCATTG 59.558 47.826 0.00 0.00 0.00 2.82
3673 7891 3.074390 TGTCCATCCTCAGAACAACCATT 59.926 43.478 0.00 0.00 0.00 3.16
3674 7892 2.644299 TGTCCATCCTCAGAACAACCAT 59.356 45.455 0.00 0.00 0.00 3.55
3813 8034 2.779755 AATGTCGATTGTAGGGCACA 57.220 45.000 0.00 0.00 34.51 4.57
3830 8051 9.308000 TCACACAGGAAACAAAATAGGAATAAT 57.692 29.630 0.00 0.00 0.00 1.28
4050 8271 2.692557 CAGTGAAACAATTGGTGGTCCA 59.307 45.455 10.83 0.00 41.43 4.02
4132 8353 1.227234 GCCATTTGTAATGGGCCGC 60.227 57.895 17.57 2.54 40.55 6.53
4285 8506 0.467290 GTTTGGACCAGGACCAAGCA 60.467 55.000 25.63 10.94 46.05 3.91
4330 8554 9.277783 ACAGCATATTTAGACCAGATATTTCAC 57.722 33.333 0.00 0.00 0.00 3.18
4486 9315 7.153985 TGATGATGACAAAGCATCGATATACA 58.846 34.615 0.00 0.00 45.93 2.29
4487 9316 7.586714 TGATGATGACAAAGCATCGATATAC 57.413 36.000 0.00 0.00 45.93 1.47
5096 9941 7.541437 ACAGAGCGAGTAGTACAAAGTAAAATC 59.459 37.037 2.52 0.00 0.00 2.17
5113 9958 4.336993 ACTTATGTCTAGGAACAGAGCGAG 59.663 45.833 0.00 0.00 31.50 5.03
5114 9959 4.270834 ACTTATGTCTAGGAACAGAGCGA 58.729 43.478 0.00 0.00 31.50 4.93
5115 9960 4.602995 GACTTATGTCTAGGAACAGAGCG 58.397 47.826 1.60 0.00 39.94 5.03
5143 9988 8.307483 CCGTATGTAGTTCATATTGGAATCTCT 58.693 37.037 5.56 0.00 40.54 3.10
5144 9989 8.304596 TCCGTATGTAGTTCATATTGGAATCTC 58.695 37.037 9.72 0.00 40.31 2.75
5145 9990 8.190326 TCCGTATGTAGTTCATATTGGAATCT 57.810 34.615 9.72 0.00 40.31 2.40
5146 9991 7.063544 GCTCCGTATGTAGTTCATATTGGAATC 59.936 40.741 11.96 6.35 41.44 2.52
5147 9992 6.874134 GCTCCGTATGTAGTTCATATTGGAAT 59.126 38.462 11.96 0.00 41.44 3.01
5148 9993 6.183360 TGCTCCGTATGTAGTTCATATTGGAA 60.183 38.462 11.96 1.11 41.44 3.53
5149 9994 5.303333 TGCTCCGTATGTAGTTCATATTGGA 59.697 40.000 10.96 10.96 40.63 3.53
5150 9995 5.538118 TGCTCCGTATGTAGTTCATATTGG 58.462 41.667 5.26 5.26 40.54 3.16
5151 9996 7.477144 TTTGCTCCGTATGTAGTTCATATTG 57.523 36.000 0.00 0.00 40.54 1.90
5152 9997 8.559536 CATTTTGCTCCGTATGTAGTTCATATT 58.440 33.333 0.00 0.00 40.54 1.28
5153 9998 7.931407 TCATTTTGCTCCGTATGTAGTTCATAT 59.069 33.333 0.00 0.00 40.54 1.78
5154 9999 7.269316 TCATTTTGCTCCGTATGTAGTTCATA 58.731 34.615 0.00 0.00 37.91 2.15
5155 10000 6.112734 TCATTTTGCTCCGTATGTAGTTCAT 58.887 36.000 0.00 0.00 40.25 2.57
5156 10001 5.483811 TCATTTTGCTCCGTATGTAGTTCA 58.516 37.500 0.00 0.00 0.00 3.18
5157 10002 5.581085 ACTCATTTTGCTCCGTATGTAGTTC 59.419 40.000 0.00 0.00 0.00 3.01
5158 10003 5.351465 CACTCATTTTGCTCCGTATGTAGTT 59.649 40.000 0.00 0.00 0.00 2.24
5159 10004 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
5160 10005 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
5161 10006 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
5162 10007 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
5163 10008 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
5164 10009 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
5165 10010 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5166 10011 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
5167 10012 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5168 10013 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5169 10014 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5170 10015 8.621532 TTTAGTGTAGATTCACTCATTTTGCT 57.378 30.769 2.59 0.00 45.79 3.91
5171 10016 9.677567 TTTTTAGTGTAGATTCACTCATTTTGC 57.322 29.630 2.59 0.00 45.79 3.68
5194 10039 8.997621 ATACGGATGTATATAGACGCATTTTT 57.002 30.769 0.00 0.00 39.52 1.94
5245 10090 9.875708 ACTCTCTCTGTTCCTAAATATATGTCT 57.124 33.333 0.00 0.00 0.00 3.41
5253 10098 9.482175 AATGTACTACTCTCTCTGTTCCTAAAT 57.518 33.333 0.00 0.00 0.00 1.40
5254 10099 8.880991 AATGTACTACTCTCTCTGTTCCTAAA 57.119 34.615 0.00 0.00 0.00 1.85
5260 10105 9.924010 ACCTTATAATGTACTACTCTCTCTGTT 57.076 33.333 0.00 0.00 0.00 3.16
5261 10106 9.563748 GACCTTATAATGTACTACTCTCTCTGT 57.436 37.037 0.00 0.00 0.00 3.41
5262 10107 9.005777 GGACCTTATAATGTACTACTCTCTCTG 57.994 40.741 0.00 0.00 0.00 3.35
5263 10108 8.725256 TGGACCTTATAATGTACTACTCTCTCT 58.275 37.037 4.93 0.00 0.00 3.10
5264 10109 8.785946 GTGGACCTTATAATGTACTACTCTCTC 58.214 40.741 4.93 0.00 0.00 3.20
5265 10110 8.504409 AGTGGACCTTATAATGTACTACTCTCT 58.496 37.037 4.93 0.00 0.00 3.10
5266 10111 8.694581 AGTGGACCTTATAATGTACTACTCTC 57.305 38.462 4.93 0.00 0.00 3.20
5348 10197 0.680618 TGGGAATTGCACAAAGGCAG 59.319 50.000 0.00 0.00 45.88 4.85
5400 10249 6.305693 ACAGAGTACAAAGTTCAAAGATGC 57.694 37.500 0.00 0.00 0.00 3.91
5543 10744 7.391833 TGACCAAATTAAAAGCCAAACTTGTTT 59.608 29.630 0.00 0.00 39.09 2.83
5546 10747 6.314896 TGTGACCAAATTAAAAGCCAAACTTG 59.685 34.615 0.00 0.00 39.09 3.16
5549 10750 6.481644 TGATGTGACCAAATTAAAAGCCAAAC 59.518 34.615 0.00 0.00 0.00 2.93
5595 10801 9.191995 AGAACCTAGTTGCAAAATTTAAAATCG 57.808 29.630 0.00 0.00 0.00 3.34
5664 10870 4.715713 ACTAAAAGACCCTTGTGAGGAAC 58.284 43.478 0.00 0.00 46.74 3.62
5716 10922 5.067674 TGCATGAGTAAATTCAAGGCCATAC 59.932 40.000 5.01 0.00 33.23 2.39
5717 10923 5.199723 TGCATGAGTAAATTCAAGGCCATA 58.800 37.500 5.01 0.00 33.23 2.74
5792 10998 2.571206 CGAAAGCCTTTTTCAGTACGC 58.429 47.619 0.00 0.00 0.00 4.42
5808 11014 7.561251 TGCTTAATATATATAGCAGGGCGAAA 58.439 34.615 13.81 0.00 38.61 3.46
5816 11022 9.166173 CTTGTGGCTTGCTTAATATATATAGCA 57.834 33.333 13.81 13.81 41.51 3.49
5828 11034 0.110295 TGGCTCTTGTGGCTTGCTTA 59.890 50.000 0.00 0.00 0.00 3.09
5840 11046 0.550914 TGTTGGACCTTGTGGCTCTT 59.449 50.000 0.00 0.00 36.63 2.85
5871 11077 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5872 11078 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5873 11079 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5874 11080 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5875 11081 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5876 11082 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5877 11083 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5878 11084 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5879 11085 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5880 11086 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
5881 11087 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
5882 11088 1.155889 CTGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
5883 11089 0.447406 CCTGTGTGTGTGTGTGTGTG 59.553 55.000 0.00 0.00 0.00 3.82
5884 11090 0.036164 ACCTGTGTGTGTGTGTGTGT 59.964 50.000 0.00 0.00 0.00 3.72
5885 11091 1.933181 CTACCTGTGTGTGTGTGTGTG 59.067 52.381 0.00 0.00 0.00 3.82
5886 11092 1.742411 GCTACCTGTGTGTGTGTGTGT 60.742 52.381 0.00 0.00 0.00 3.72
5887 11093 0.937304 GCTACCTGTGTGTGTGTGTG 59.063 55.000 0.00 0.00 0.00 3.82
5888 11094 0.539518 TGCTACCTGTGTGTGTGTGT 59.460 50.000 0.00 0.00 0.00 3.72
5930 11136 9.188588 CGATATACCACGATATGTACTTGTTTT 57.811 33.333 0.00 0.00 0.00 2.43
6023 11229 6.519761 GTGAATAGTTGCACAGACAAATAACG 59.480 38.462 0.00 0.00 34.21 3.18
6077 11283 5.435686 ACTCCTGTTATAGAAACATGCCA 57.564 39.130 0.00 0.00 0.00 4.92
6083 11289 6.786967 TCACCCTACTCCTGTTATAGAAAC 57.213 41.667 0.00 0.00 0.00 2.78
6103 11310 5.741011 TCAAGGTGGTATAACAGGAATCAC 58.259 41.667 0.00 0.00 0.00 3.06
6240 11447 4.481463 CAAAAGAAATTCCGCCAACGTAT 58.519 39.130 0.00 0.00 37.70 3.06
6244 11451 3.378911 TCCAAAAGAAATTCCGCCAAC 57.621 42.857 0.00 0.00 0.00 3.77
6291 11498 3.746045 TCTCTAGTTCCGCAACAGTTT 57.254 42.857 0.00 0.00 34.60 2.66
6466 11673 6.016777 CACAACAAAATATGCCCCTCTCTATC 60.017 42.308 0.00 0.00 0.00 2.08
6469 11676 4.019174 CACAACAAAATATGCCCCTCTCT 58.981 43.478 0.00 0.00 0.00 3.10
6509 11718 5.717078 TCACTCTAATCCGTACTGTTTGT 57.283 39.130 0.00 0.00 0.00 2.83
6519 11728 8.030106 GGAACTAATTAGGATCACTCTAATCCG 58.970 40.741 16.73 0.00 46.14 4.18
6561 11776 2.749621 GCTTCTTCATCAACGGGTTCAT 59.250 45.455 0.00 0.00 0.00 2.57
6597 11812 5.163963 GCAGAAAACAAAGTTTGACACAAGG 60.164 40.000 22.23 6.96 0.00 3.61
6600 11815 5.132897 AGCAGAAAACAAAGTTTGACACA 57.867 34.783 22.23 0.00 0.00 3.72
6601 11816 5.743872 CCTAGCAGAAAACAAAGTTTGACAC 59.256 40.000 22.23 9.89 0.00 3.67
6606 11821 7.781056 TCAAATCCTAGCAGAAAACAAAGTTT 58.219 30.769 0.00 0.00 0.00 2.66
6694 11909 4.689062 TCAGAGGATTCTTAGAACACCCT 58.311 43.478 13.56 12.16 0.00 4.34
6727 11942 5.521735 CGCATCCTATTCCTATGATGCTAAC 59.478 44.000 17.92 0.00 45.94 2.34
6728 11943 5.187772 ACGCATCCTATTCCTATGATGCTAA 59.812 40.000 17.92 0.00 45.94 3.09
6729 11944 4.711846 ACGCATCCTATTCCTATGATGCTA 59.288 41.667 17.92 0.00 45.94 3.49
6730 11945 3.517100 ACGCATCCTATTCCTATGATGCT 59.483 43.478 17.92 5.87 45.94 3.79
6731 11946 3.866651 ACGCATCCTATTCCTATGATGC 58.133 45.455 12.09 12.09 45.28 3.91
6732 11947 5.482006 TCAACGCATCCTATTCCTATGATG 58.518 41.667 0.00 0.00 34.73 3.07
6733 11948 5.745312 TCAACGCATCCTATTCCTATGAT 57.255 39.130 0.00 0.00 0.00 2.45
6734 11949 5.012046 ACATCAACGCATCCTATTCCTATGA 59.988 40.000 0.00 0.00 0.00 2.15
6735 11950 5.121298 CACATCAACGCATCCTATTCCTATG 59.879 44.000 0.00 0.00 0.00 2.23
6736 11951 5.240891 CACATCAACGCATCCTATTCCTAT 58.759 41.667 0.00 0.00 0.00 2.57
6737 11952 4.503123 CCACATCAACGCATCCTATTCCTA 60.503 45.833 0.00 0.00 0.00 2.94
6738 11953 3.470709 CACATCAACGCATCCTATTCCT 58.529 45.455 0.00 0.00 0.00 3.36
6739 11954 2.549754 CCACATCAACGCATCCTATTCC 59.450 50.000 0.00 0.00 0.00 3.01
6740 11955 3.248602 GTCCACATCAACGCATCCTATTC 59.751 47.826 0.00 0.00 0.00 1.75
6741 11956 3.118261 AGTCCACATCAACGCATCCTATT 60.118 43.478 0.00 0.00 0.00 1.73
6809 12027 1.496060 AGAATATGCGAGGTGGGACA 58.504 50.000 0.00 0.00 0.00 4.02
6824 12042 4.202253 GCTCCCAAACCAACTGAAAAGAAT 60.202 41.667 0.00 0.00 0.00 2.40
6839 12067 1.605453 GACCCATACGGCTCCCAAA 59.395 57.895 0.00 0.00 33.26 3.28
6870 12098 5.598830 ACTAGACTGAAACCTGAAAGTCTCA 59.401 40.000 7.41 0.00 44.70 3.27
7008 12263 6.247676 TGGTGGCGGTATTAGTAGTATCATA 58.752 40.000 0.00 0.00 0.00 2.15
7009 12264 5.081728 TGGTGGCGGTATTAGTAGTATCAT 58.918 41.667 0.00 0.00 0.00 2.45
7010 12265 4.472496 TGGTGGCGGTATTAGTAGTATCA 58.528 43.478 0.00 0.00 0.00 2.15
7011 12266 4.082354 CCTGGTGGCGGTATTAGTAGTATC 60.082 50.000 0.00 0.00 0.00 2.24
7012 12267 3.830755 CCTGGTGGCGGTATTAGTAGTAT 59.169 47.826 0.00 0.00 0.00 2.12
7013 12268 3.225104 CCTGGTGGCGGTATTAGTAGTA 58.775 50.000 0.00 0.00 0.00 1.82
7025 12280 3.041940 GAACGTGACCTGGTGGCG 61.042 66.667 2.82 11.08 36.63 5.69
7030 12285 2.231478 ACTCACTATGAACGTGACCTGG 59.769 50.000 0.00 0.00 36.54 4.45
7032 12287 4.077108 TGTACTCACTATGAACGTGACCT 58.923 43.478 0.00 0.00 36.54 3.85
7065 12396 2.485122 CTTCGCCGGCAATTGTCC 59.515 61.111 28.98 6.65 0.00 4.02
7066 12397 2.200170 AAGCTTCGCCGGCAATTGTC 62.200 55.000 28.98 9.76 0.00 3.18
7075 12406 1.097547 AATGGATGGAAGCTTCGCCG 61.098 55.000 19.91 0.00 0.00 6.46
7095 12426 1.371467 AACCCAGGATGTCACATGGA 58.629 50.000 0.00 0.00 43.28 3.41
7116 12447 3.646534 TGAGCATAATGACTGAGAGGGA 58.353 45.455 0.00 0.00 0.00 4.20
7129 12460 3.423539 AGTGCACTCCTTTGAGCATAA 57.576 42.857 15.25 0.00 42.74 1.90
7151 12482 2.710096 TTTTATCTTCGAGGGGCAGG 57.290 50.000 0.00 0.00 0.00 4.85
7154 12485 2.687935 TGCAATTTTATCTTCGAGGGGC 59.312 45.455 0.00 0.00 0.00 5.80
7158 12489 9.559958 AAGTTTACATGCAATTTTATCTTCGAG 57.440 29.630 0.00 0.00 0.00 4.04
7159 12490 9.340695 CAAGTTTACATGCAATTTTATCTTCGA 57.659 29.630 0.00 0.00 0.00 3.71
7160 12491 8.103924 GCAAGTTTACATGCAATTTTATCTTCG 58.896 33.333 5.31 0.00 40.01 3.79
7161 12492 8.924691 TGCAAGTTTACATGCAATTTTATCTTC 58.075 29.630 10.02 0.00 45.88 2.87
7187 13568 0.698886 TAGATGGGAATGGCCTGCCT 60.699 55.000 9.97 0.00 36.66 4.75
7188 13569 0.538287 GTAGATGGGAATGGCCTGCC 60.538 60.000 3.32 0.00 36.66 4.85
7189 13570 0.538287 GGTAGATGGGAATGGCCTGC 60.538 60.000 3.32 0.00 36.66 4.85
7190 13571 0.846015 TGGTAGATGGGAATGGCCTG 59.154 55.000 3.32 0.00 36.66 4.85
7191 13572 0.846693 GTGGTAGATGGGAATGGCCT 59.153 55.000 3.32 0.00 36.66 5.19
7199 13633 1.069204 CGAGGTGATGTGGTAGATGGG 59.931 57.143 0.00 0.00 0.00 4.00
7205 13639 2.022195 GACTAGCGAGGTGATGTGGTA 58.978 52.381 0.00 0.00 0.00 3.25
7230 13664 2.922503 TCTTCAGCACCTCCGCCA 60.923 61.111 0.00 0.00 0.00 5.69
7250 13684 2.159043 ACACATGTCTTAGGGCATCGAG 60.159 50.000 0.00 0.00 0.00 4.04
7281 13715 2.425592 TGACCTTGTCACAGCCCG 59.574 61.111 0.00 0.00 37.67 6.13
7288 13722 1.124780 TTCCTTCGGTGACCTTGTCA 58.875 50.000 0.00 0.00 40.50 3.58
7289 13723 2.249844 TTTCCTTCGGTGACCTTGTC 57.750 50.000 0.00 0.00 0.00 3.18
7291 13725 3.857010 GCATTTTTCCTTCGGTGACCTTG 60.857 47.826 0.00 0.00 0.00 3.61
7310 13744 4.020307 CCAAATTCCCAGTTAACCTTGCAT 60.020 41.667 0.88 0.00 0.00 3.96
7316 13750 6.904463 TTAAGTCCAAATTCCCAGTTAACC 57.096 37.500 0.88 0.00 0.00 2.85
7319 13753 7.562088 ACTTGTTTAAGTCCAAATTCCCAGTTA 59.438 33.333 0.00 0.00 43.53 2.24
7326 13760 6.536941 TGGCAAACTTGTTTAAGTCCAAATTC 59.463 34.615 0.00 0.00 46.14 2.17
7327 13761 6.315144 GTGGCAAACTTGTTTAAGTCCAAATT 59.685 34.615 0.00 0.00 46.14 1.82
7328 13762 5.815222 GTGGCAAACTTGTTTAAGTCCAAAT 59.185 36.000 0.00 0.00 46.14 2.32
7329 13763 5.046950 AGTGGCAAACTTGTTTAAGTCCAAA 60.047 36.000 0.00 0.00 46.14 3.28
7330 13764 4.464597 AGTGGCAAACTTGTTTAAGTCCAA 59.535 37.500 0.00 0.00 46.14 3.53
7331 13765 4.020543 AGTGGCAAACTTGTTTAAGTCCA 58.979 39.130 0.00 2.56 46.14 4.02
7332 13766 4.359706 CAGTGGCAAACTTGTTTAAGTCC 58.640 43.478 0.00 0.31 46.14 3.85
7333 13767 3.796717 GCAGTGGCAAACTTGTTTAAGTC 59.203 43.478 0.00 0.00 42.30 3.01
7334 13768 3.447229 AGCAGTGGCAAACTTGTTTAAGT 59.553 39.130 0.00 0.00 45.51 2.24
7335 13769 4.044426 GAGCAGTGGCAAACTTGTTTAAG 58.956 43.478 0.00 0.00 44.61 1.85
7336 13770 3.699038 AGAGCAGTGGCAAACTTGTTTAA 59.301 39.130 0.00 0.00 44.61 1.52
7337 13771 3.287222 AGAGCAGTGGCAAACTTGTTTA 58.713 40.909 0.00 0.00 44.61 2.01
7338 13772 2.099756 GAGAGCAGTGGCAAACTTGTTT 59.900 45.455 0.00 0.00 44.61 2.83
7339 13773 1.678101 GAGAGCAGTGGCAAACTTGTT 59.322 47.619 0.00 0.00 44.61 2.83
7340 13774 1.312815 GAGAGCAGTGGCAAACTTGT 58.687 50.000 0.00 0.00 44.61 3.16
7341 13775 0.595095 GGAGAGCAGTGGCAAACTTG 59.405 55.000 0.00 0.00 44.61 3.16
7342 13776 0.183492 TGGAGAGCAGTGGCAAACTT 59.817 50.000 0.00 0.00 44.61 2.66
7343 13777 0.536006 GTGGAGAGCAGTGGCAAACT 60.536 55.000 0.00 0.00 44.61 2.66
7344 13778 1.518903 GGTGGAGAGCAGTGGCAAAC 61.519 60.000 0.00 0.00 44.61 2.93
7345 13779 1.228245 GGTGGAGAGCAGTGGCAAA 60.228 57.895 0.00 0.00 44.61 3.68
7346 13780 2.116983 GAGGTGGAGAGCAGTGGCAA 62.117 60.000 0.00 0.00 44.61 4.52
7347 13781 2.527624 AGGTGGAGAGCAGTGGCA 60.528 61.111 0.00 0.00 44.61 4.92
7348 13782 2.267324 GAGGTGGAGAGCAGTGGC 59.733 66.667 0.00 0.00 41.61 5.01
7349 13783 1.483595 TTGGAGGTGGAGAGCAGTGG 61.484 60.000 0.00 0.00 0.00 4.00
7350 13784 0.617413 ATTGGAGGTGGAGAGCAGTG 59.383 55.000 0.00 0.00 0.00 3.66
7351 13785 0.617413 CATTGGAGGTGGAGAGCAGT 59.383 55.000 0.00 0.00 0.00 4.40
7352 13786 0.107312 CCATTGGAGGTGGAGAGCAG 60.107 60.000 0.00 0.00 39.12 4.24
7353 13787 1.993653 CCATTGGAGGTGGAGAGCA 59.006 57.895 0.00 0.00 39.12 4.26
7354 13788 1.452833 GCCATTGGAGGTGGAGAGC 60.453 63.158 6.95 0.00 39.12 4.09
7355 13789 0.622665 AAGCCATTGGAGGTGGAGAG 59.377 55.000 6.95 0.00 39.12 3.20
7356 13790 1.075601 AAAGCCATTGGAGGTGGAGA 58.924 50.000 6.95 0.00 39.12 3.71
7357 13791 1.180029 CAAAGCCATTGGAGGTGGAG 58.820 55.000 6.95 0.00 39.12 3.86
7358 13792 0.776810 TCAAAGCCATTGGAGGTGGA 59.223 50.000 6.95 0.00 39.12 4.02
7359 13793 1.856629 ATCAAAGCCATTGGAGGTGG 58.143 50.000 6.95 0.00 39.62 4.61
7360 13794 3.258872 TCAAATCAAAGCCATTGGAGGTG 59.741 43.478 6.95 0.20 39.62 4.00
7361 13795 3.509442 TCAAATCAAAGCCATTGGAGGT 58.491 40.909 6.95 0.00 39.62 3.85
7362 13796 4.748277 ATCAAATCAAAGCCATTGGAGG 57.252 40.909 6.95 0.00 39.62 4.30
7363 13797 4.873827 CCAATCAAATCAAAGCCATTGGAG 59.126 41.667 6.95 0.00 41.92 3.86
7364 13798 4.286549 ACCAATCAAATCAAAGCCATTGGA 59.713 37.500 6.95 0.00 41.92 3.53
7365 13799 4.581868 ACCAATCAAATCAAAGCCATTGG 58.418 39.130 0.00 0.00 43.98 3.16
7366 13800 4.632688 GGACCAATCAAATCAAAGCCATTG 59.367 41.667 0.00 0.00 40.58 2.82
7367 13801 4.621274 CGGACCAATCAAATCAAAGCCATT 60.621 41.667 0.00 0.00 0.00 3.16
7368 13802 3.119029 CGGACCAATCAAATCAAAGCCAT 60.119 43.478 0.00 0.00 0.00 4.40
7369 13803 2.230992 CGGACCAATCAAATCAAAGCCA 59.769 45.455 0.00 0.00 0.00 4.75
7370 13804 2.491693 TCGGACCAATCAAATCAAAGCC 59.508 45.455 0.00 0.00 0.00 4.35
7371 13805 3.762779 CTCGGACCAATCAAATCAAAGC 58.237 45.455 0.00 0.00 0.00 3.51
7372 13806 3.428045 GGCTCGGACCAATCAAATCAAAG 60.428 47.826 0.00 0.00 0.00 2.77
7373 13807 2.491693 GGCTCGGACCAATCAAATCAAA 59.508 45.455 0.00 0.00 0.00 2.69
7374 13808 2.091541 GGCTCGGACCAATCAAATCAA 58.908 47.619 0.00 0.00 0.00 2.57
7375 13809 1.004161 TGGCTCGGACCAATCAAATCA 59.996 47.619 0.00 0.00 36.55 2.57
7376 13810 1.750193 TGGCTCGGACCAATCAAATC 58.250 50.000 0.00 0.00 36.55 2.17
7377 13811 2.301346 GATGGCTCGGACCAATCAAAT 58.699 47.619 1.32 0.00 44.65 2.32
7378 13812 1.681780 GGATGGCTCGGACCAATCAAA 60.682 52.381 1.32 0.00 44.65 2.69
7379 13813 0.107214 GGATGGCTCGGACCAATCAA 60.107 55.000 1.32 0.00 44.65 2.57
7380 13814 1.271127 TGGATGGCTCGGACCAATCA 61.271 55.000 1.32 1.33 44.65 2.57
7381 13815 0.107214 TTGGATGGCTCGGACCAATC 60.107 55.000 1.32 1.34 44.65 2.67
7382 13816 0.107017 CTTGGATGGCTCGGACCAAT 60.107 55.000 0.00 0.00 44.65 3.16
7383 13817 1.299648 CTTGGATGGCTCGGACCAA 59.700 57.895 1.32 0.00 44.65 3.67
7384 13818 2.989639 CTTGGATGGCTCGGACCA 59.010 61.111 0.00 0.00 45.82 4.02
7385 13819 2.514824 GCTTGGATGGCTCGGACC 60.515 66.667 0.00 0.00 0.00 4.46
7386 13820 2.514824 GGCTTGGATGGCTCGGAC 60.515 66.667 0.00 0.00 0.00 4.79
7387 13821 2.300967 AAGGCTTGGATGGCTCGGA 61.301 57.895 0.00 0.00 42.20 4.55
7388 13822 2.117156 CAAGGCTTGGATGGCTCGG 61.117 63.158 19.55 0.00 42.20 4.63
7389 13823 3.506108 CAAGGCTTGGATGGCTCG 58.494 61.111 19.55 0.00 42.20 5.03
7398 13832 2.520458 TGACCCCACCAAGGCTTG 59.480 61.111 20.31 20.31 35.39 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.