Multiple sequence alignment - TraesCS3B01G264600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G264600 chr3B 100.000 3805 0 0 1 3805 423537467 423533663 0.000000e+00 7027.0
1 TraesCS3B01G264600 chr3B 87.342 158 11 4 3150 3307 18473255 18473107 5.050000e-39 172.0
2 TraesCS3B01G264600 chr3B 92.553 94 7 0 3150 3243 151120129 151120036 6.630000e-28 135.0
3 TraesCS3B01G264600 chr3D 97.087 2712 72 6 447 3154 326128172 326125464 0.000000e+00 4564.0
4 TraesCS3B01G264600 chr3D 96.544 463 12 1 2 464 326128648 326128190 0.000000e+00 763.0
5 TraesCS3B01G264600 chr3D 94.470 217 12 0 3309 3525 326125455 326125239 6.090000e-88 335.0
6 TraesCS3B01G264600 chr3D 78.049 164 30 5 3527 3688 611592512 611592671 8.700000e-17 99.0
7 TraesCS3B01G264600 chr3A 98.605 1434 18 1 389 1820 438778904 438780337 0.000000e+00 2536.0
8 TraesCS3B01G264600 chr3A 98.039 969 16 2 2187 3154 438780623 438781589 0.000000e+00 1681.0
9 TraesCS3B01G264600 chr3A 98.824 255 3 0 1849 2103 438780338 438780592 4.480000e-124 455.0
10 TraesCS3B01G264600 chr3A 92.627 217 13 1 3309 3525 438781598 438781811 3.690000e-80 309.0
11 TraesCS3B01G264600 chr3A 100.000 33 0 0 2123 2155 438780591 438780623 1.140000e-05 62.1
12 TraesCS3B01G264600 chr2D 87.143 280 13 5 3527 3805 565150273 565150530 2.870000e-76 296.0
13 TraesCS3B01G264600 chr2D 86.957 161 12 3 3150 3310 67422414 67422565 5.050000e-39 172.0
14 TraesCS3B01G264600 chr2D 90.566 53 3 2 3258 3308 567966493 567966545 6.820000e-08 69.4
15 TraesCS3B01G264600 chr1D 93.125 160 3 2 3150 3309 67228099 67227948 1.060000e-55 228.0
16 TraesCS3B01G264600 chr2B 95.868 121 5 0 3685 3805 101080926 101080806 3.000000e-46 196.0
17 TraesCS3B01G264600 chr2B 96.491 114 4 0 3527 3640 101081550 101081437 5.020000e-44 189.0
18 TraesCS3B01G264600 chr2B 96.154 52 2 0 3634 3685 101081252 101081201 6.770000e-13 86.1
19 TraesCS3B01G264600 chr4B 88.125 160 10 4 3150 3309 482775966 482775816 8.400000e-42 182.0
20 TraesCS3B01G264600 chr6A 82.530 166 19 5 3150 3313 122816708 122816865 1.840000e-28 137.0
21 TraesCS3B01G264600 chr6A 78.095 210 38 7 3517 3725 8387221 8387019 3.990000e-25 126.0
22 TraesCS3B01G264600 chr7D 78.500 200 35 7 3527 3725 597994972 597994780 1.440000e-24 124.0
23 TraesCS3B01G264600 chr6B 80.488 164 26 5 3527 3688 184034073 184033914 1.860000e-23 121.0
24 TraesCS3B01G264600 chr5D 80.982 163 18 8 3150 3308 551335469 551335316 2.400000e-22 117.0
25 TraesCS3B01G264600 chr7A 90.909 66 4 2 3529 3592 323483744 323483809 1.880000e-13 87.9
26 TraesCS3B01G264600 chr7B 89.706 68 5 2 3529 3594 524040293 524040360 6.770000e-13 86.1
27 TraesCS3B01G264600 chr5B 81.132 106 17 2 3527 3629 337980947 337980842 8.760000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G264600 chr3B 423533663 423537467 3804 True 7027.000000 7027 100.000000 1 3805 1 chr3B.!!$R3 3804
1 TraesCS3B01G264600 chr3D 326125239 326128648 3409 True 1887.333333 4564 96.033667 2 3525 3 chr3D.!!$R1 3523
2 TraesCS3B01G264600 chr3A 438778904 438781811 2907 False 1008.620000 2536 97.619000 389 3525 5 chr3A.!!$F1 3136

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
865 902 0.324275 GAGAGTGACAGGGGAGCTCT 60.324 60.0 14.64 0.0 39.00 4.09 F
1389 1428 1.664321 CCACCGACGAGGGTAAGGAG 61.664 65.0 0.00 0.0 46.96 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2363 2434 0.600255 CAAACACGAAGGCCGAGACT 60.600 55.0 0.0 0.0 41.76 3.24 R
3230 3304 0.038890 AGAAGCCAAAGAAGCCCCTC 59.961 55.0 0.0 0.0 0.00 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
144 145 0.397941 GGCAGATGCTGGGCTGTATA 59.602 55.000 4.59 0.00 41.70 1.47
158 159 6.354130 TGGGCTGTATACAGATAAGAAAACC 58.646 40.000 32.39 20.36 46.59 3.27
208 209 9.892130 CATCTAGACCTGTCTTAACCTAAAATT 57.108 33.333 4.94 0.00 40.93 1.82
214 215 6.045106 ACCTGTCTTAACCTAAAATTGAGGGA 59.955 38.462 0.71 0.00 38.52 4.20
230 231 6.901615 TTGAGGGAATCTTTAGGTGGAATA 57.098 37.500 0.00 0.00 0.00 1.75
233 234 6.851836 TGAGGGAATCTTTAGGTGGAATAGAT 59.148 38.462 0.00 0.00 0.00 1.98
248 249 6.986817 GTGGAATAGATTTACTGCTAAGCTCA 59.013 38.462 0.00 0.00 0.00 4.26
249 250 6.986817 TGGAATAGATTTACTGCTAAGCTCAC 59.013 38.462 0.00 0.00 0.00 3.51
250 251 6.425417 GGAATAGATTTACTGCTAAGCTCACC 59.575 42.308 0.00 0.00 0.00 4.02
251 252 6.739331 ATAGATTTACTGCTAAGCTCACCT 57.261 37.500 0.00 0.00 0.00 4.00
306 307 4.627035 GGTTTGCCATCTTTTTCATACAGC 59.373 41.667 0.00 0.00 34.09 4.40
349 350 6.078456 TCTCAATAACAGGGAAATGATGGT 57.922 37.500 0.00 0.00 0.00 3.55
379 380 3.751518 ACACTGGTGGTTATGTCTTTCC 58.248 45.455 5.70 0.00 34.19 3.13
434 435 8.589338 AGTGTCACTATCTGTAATTCTTCTGTT 58.411 33.333 2.87 0.00 0.00 3.16
531 566 3.006430 TGGCATGATTTGATGGATGCATC 59.994 43.478 19.45 19.45 42.50 3.91
581 618 3.462982 TGTGTACACAATCACTGGTGTC 58.537 45.455 26.07 0.00 44.46 3.67
654 691 2.512692 TGATGATTGGTGAACCCCTG 57.487 50.000 0.00 0.00 34.29 4.45
865 902 0.324275 GAGAGTGACAGGGGAGCTCT 60.324 60.000 14.64 0.00 39.00 4.09
1093 1132 2.501723 GGGCTACTTGATCCTCTTGACA 59.498 50.000 0.00 0.00 0.00 3.58
1179 1218 4.941713 ACAGAGAGAGAAGGTCAAGGTAT 58.058 43.478 0.00 0.00 0.00 2.73
1389 1428 1.664321 CCACCGACGAGGGTAAGGAG 61.664 65.000 0.00 0.00 46.96 3.69
1542 1581 2.644299 TGTTCATGGAGGATGGTTGTCT 59.356 45.455 0.00 0.00 32.26 3.41
1593 1632 3.124636 GGTACAATAAACAGAGTGCACGG 59.875 47.826 12.01 7.93 0.00 4.94
1632 1671 8.523523 TTGTTATTCTTGATTCAGCATTTGTG 57.476 30.769 0.00 0.00 0.00 3.33
2155 2194 2.355756 GTCATGCATATTTGACGTGGCT 59.644 45.455 0.00 0.00 33.57 4.75
2156 2195 3.016031 TCATGCATATTTGACGTGGCTT 58.984 40.909 0.00 0.00 0.00 4.35
2157 2196 3.443329 TCATGCATATTTGACGTGGCTTT 59.557 39.130 0.00 0.00 0.00 3.51
2158 2197 3.932545 TGCATATTTGACGTGGCTTTT 57.067 38.095 0.00 0.00 0.00 2.27
2159 2198 4.250116 TGCATATTTGACGTGGCTTTTT 57.750 36.364 0.00 0.00 0.00 1.94
2160 2199 5.378292 TGCATATTTGACGTGGCTTTTTA 57.622 34.783 0.00 0.00 0.00 1.52
2161 2200 5.398169 TGCATATTTGACGTGGCTTTTTAG 58.602 37.500 0.00 0.00 0.00 1.85
2162 2201 5.048364 TGCATATTTGACGTGGCTTTTTAGT 60.048 36.000 0.00 0.00 0.00 2.24
2163 2202 5.861787 GCATATTTGACGTGGCTTTTTAGTT 59.138 36.000 0.00 0.00 0.00 2.24
2164 2203 6.364976 GCATATTTGACGTGGCTTTTTAGTTT 59.635 34.615 0.00 0.00 0.00 2.66
2165 2204 7.095816 GCATATTTGACGTGGCTTTTTAGTTTT 60.096 33.333 0.00 0.00 0.00 2.43
2166 2205 6.582437 ATTTGACGTGGCTTTTTAGTTTTG 57.418 33.333 0.00 0.00 0.00 2.44
2167 2206 3.440228 TGACGTGGCTTTTTAGTTTTGC 58.560 40.909 0.00 0.00 0.00 3.68
2168 2207 3.129638 TGACGTGGCTTTTTAGTTTTGCT 59.870 39.130 0.00 0.00 0.00 3.91
2169 2208 3.702330 ACGTGGCTTTTTAGTTTTGCTC 58.298 40.909 0.00 0.00 0.00 4.26
2170 2209 3.129638 ACGTGGCTTTTTAGTTTTGCTCA 59.870 39.130 0.00 0.00 0.00 4.26
2171 2210 4.202111 ACGTGGCTTTTTAGTTTTGCTCAT 60.202 37.500 0.00 0.00 0.00 2.90
2172 2211 4.382754 CGTGGCTTTTTAGTTTTGCTCATC 59.617 41.667 0.00 0.00 0.00 2.92
2173 2212 5.288804 GTGGCTTTTTAGTTTTGCTCATCA 58.711 37.500 0.00 0.00 0.00 3.07
2174 2213 5.928264 GTGGCTTTTTAGTTTTGCTCATCAT 59.072 36.000 0.00 0.00 0.00 2.45
2175 2214 5.927689 TGGCTTTTTAGTTTTGCTCATCATG 59.072 36.000 0.00 0.00 0.00 3.07
2176 2215 5.349543 GGCTTTTTAGTTTTGCTCATCATGG 59.650 40.000 0.00 0.00 0.00 3.66
2177 2216 5.349543 GCTTTTTAGTTTTGCTCATCATGGG 59.650 40.000 0.00 0.00 0.00 4.00
2178 2217 5.404466 TTTTAGTTTTGCTCATCATGGGG 57.596 39.130 0.00 0.00 0.00 4.96
2179 2218 2.905415 AGTTTTGCTCATCATGGGGA 57.095 45.000 0.00 0.00 0.00 4.81
2180 2219 3.173953 AGTTTTGCTCATCATGGGGAA 57.826 42.857 0.00 0.00 0.00 3.97
2181 2220 3.509442 AGTTTTGCTCATCATGGGGAAA 58.491 40.909 0.00 0.00 36.36 3.13
2182 2221 4.098894 AGTTTTGCTCATCATGGGGAAAT 58.901 39.130 4.84 0.00 37.98 2.17
2183 2222 4.081309 AGTTTTGCTCATCATGGGGAAATG 60.081 41.667 4.84 0.00 37.98 2.32
2184 2223 3.385314 TTGCTCATCATGGGGAAATGA 57.615 42.857 0.00 0.00 40.73 2.57
2185 2224 3.605726 TGCTCATCATGGGGAAATGAT 57.394 42.857 0.00 0.00 46.02 2.45
2186 2225 3.493334 TGCTCATCATGGGGAAATGATC 58.507 45.455 0.00 0.00 43.83 2.92
2363 2434 0.250727 GCTACAACAAGACCTGCCCA 60.251 55.000 0.00 0.00 0.00 5.36
2663 2734 2.168458 TGGAGGTTGATCGGGACATA 57.832 50.000 0.00 0.00 0.00 2.29
2697 2768 1.800805 ACACGAAGATGCACTGAAGG 58.199 50.000 0.00 0.00 0.00 3.46
2903 2975 7.833682 TGGGAAATATTCTGCATGTCTTCTTTA 59.166 33.333 0.00 0.00 0.00 1.85
2944 3016 5.359009 AGAAATGCATCCTGTTATGTTCCAG 59.641 40.000 0.00 0.00 0.00 3.86
2994 3066 3.675698 GCTTTCGAGACCAGTGAGTTTAG 59.324 47.826 0.00 0.00 0.00 1.85
3015 3087 3.068024 AGAGAACTCTGATCGATCTTGCC 59.932 47.826 25.02 10.15 38.75 4.52
3078 3150 0.887247 TCCCCGCATGAACAATGTTG 59.113 50.000 2.20 0.00 38.65 3.33
3154 3228 2.866156 CACATAGTCGCATGTTAGGTGG 59.134 50.000 0.00 0.00 37.02 4.61
3155 3229 2.158957 ACATAGTCGCATGTTAGGTGGG 60.159 50.000 0.00 0.00 35.60 4.61
3159 3233 0.908910 TCGCATGTTAGGTGGGTCAT 59.091 50.000 0.00 0.00 0.00 3.06
3160 3234 1.016627 CGCATGTTAGGTGGGTCATG 58.983 55.000 0.00 0.00 40.09 3.07
3162 3236 1.016627 CATGTTAGGTGGGTCATGCG 58.983 55.000 0.00 0.00 32.83 4.73
3163 3237 0.107214 ATGTTAGGTGGGTCATGCGG 60.107 55.000 0.00 0.00 0.00 5.69
3164 3238 2.112815 GTTAGGTGGGTCATGCGGC 61.113 63.158 0.00 0.00 0.00 6.53
3165 3239 3.673956 TTAGGTGGGTCATGCGGCG 62.674 63.158 0.51 0.51 0.00 6.46
3168 3242 4.760047 GTGGGTCATGCGGCGAGT 62.760 66.667 12.98 0.00 0.00 4.18
3169 3243 3.071837 TGGGTCATGCGGCGAGTA 61.072 61.111 12.98 0.00 0.00 2.59
3170 3244 2.279517 GGGTCATGCGGCGAGTAG 60.280 66.667 12.98 0.00 0.00 2.57
3171 3245 2.494918 GGTCATGCGGCGAGTAGT 59.505 61.111 12.98 0.00 0.00 2.73
3172 3246 1.153628 GGTCATGCGGCGAGTAGTT 60.154 57.895 12.98 0.00 0.00 2.24
3173 3247 0.101759 GGTCATGCGGCGAGTAGTTA 59.898 55.000 12.98 0.00 0.00 2.24
3174 3248 1.478137 GTCATGCGGCGAGTAGTTAG 58.522 55.000 12.98 0.00 0.00 2.34
3175 3249 0.248907 TCATGCGGCGAGTAGTTAGC 60.249 55.000 12.98 0.00 0.00 3.09
3176 3250 1.299165 ATGCGGCGAGTAGTTAGCG 60.299 57.895 12.98 0.00 0.00 4.26
3177 3251 2.001361 ATGCGGCGAGTAGTTAGCGT 62.001 55.000 12.98 0.00 0.00 5.07
3178 3252 2.222217 GCGGCGAGTAGTTAGCGTG 61.222 63.158 12.98 0.00 0.00 5.34
3179 3253 1.136147 CGGCGAGTAGTTAGCGTGT 59.864 57.895 0.00 0.00 0.00 4.49
3180 3254 1.132199 CGGCGAGTAGTTAGCGTGTG 61.132 60.000 0.00 0.00 0.00 3.82
3181 3255 0.169672 GGCGAGTAGTTAGCGTGTGA 59.830 55.000 0.00 0.00 0.00 3.58
3182 3256 1.536149 GCGAGTAGTTAGCGTGTGAG 58.464 55.000 0.00 0.00 0.00 3.51
3183 3257 1.129998 GCGAGTAGTTAGCGTGTGAGA 59.870 52.381 0.00 0.00 0.00 3.27
3184 3258 2.413765 GCGAGTAGTTAGCGTGTGAGAA 60.414 50.000 0.00 0.00 0.00 2.87
3185 3259 3.818387 CGAGTAGTTAGCGTGTGAGAAA 58.182 45.455 0.00 0.00 0.00 2.52
3186 3260 3.602915 CGAGTAGTTAGCGTGTGAGAAAC 59.397 47.826 0.00 0.00 0.00 2.78
3187 3261 4.613167 CGAGTAGTTAGCGTGTGAGAAACT 60.613 45.833 0.00 0.00 34.86 2.66
3188 3262 4.547532 AGTAGTTAGCGTGTGAGAAACTG 58.452 43.478 0.00 0.00 32.85 3.16
3189 3263 2.755650 AGTTAGCGTGTGAGAAACTGG 58.244 47.619 0.00 0.00 0.00 4.00
3190 3264 1.798813 GTTAGCGTGTGAGAAACTGGG 59.201 52.381 0.00 0.00 0.00 4.45
3191 3265 1.045407 TAGCGTGTGAGAAACTGGGT 58.955 50.000 0.00 0.00 0.00 4.51
3192 3266 0.532862 AGCGTGTGAGAAACTGGGTG 60.533 55.000 0.00 0.00 0.00 4.61
3193 3267 1.507141 GCGTGTGAGAAACTGGGTGG 61.507 60.000 0.00 0.00 0.00 4.61
3194 3268 0.105964 CGTGTGAGAAACTGGGTGGA 59.894 55.000 0.00 0.00 0.00 4.02
3195 3269 1.873903 CGTGTGAGAAACTGGGTGGAG 60.874 57.143 0.00 0.00 0.00 3.86
3196 3270 1.141053 GTGTGAGAAACTGGGTGGAGT 59.859 52.381 0.00 0.00 0.00 3.85
3197 3271 1.843851 TGTGAGAAACTGGGTGGAGTT 59.156 47.619 0.00 0.00 37.81 3.01
3198 3272 2.222027 GTGAGAAACTGGGTGGAGTTG 58.778 52.381 0.00 0.00 36.28 3.16
3199 3273 1.142870 TGAGAAACTGGGTGGAGTTGG 59.857 52.381 0.00 0.00 36.28 3.77
3200 3274 0.478507 AGAAACTGGGTGGAGTTGGG 59.521 55.000 0.00 0.00 36.28 4.12
3201 3275 0.539669 GAAACTGGGTGGAGTTGGGG 60.540 60.000 0.00 0.00 36.28 4.96
3202 3276 1.293683 AAACTGGGTGGAGTTGGGGT 61.294 55.000 0.00 0.00 36.28 4.95
3203 3277 1.293683 AACTGGGTGGAGTTGGGGTT 61.294 55.000 0.00 0.00 34.79 4.11
3204 3278 0.402272 ACTGGGTGGAGTTGGGGTTA 60.402 55.000 0.00 0.00 0.00 2.85
3205 3279 0.999712 CTGGGTGGAGTTGGGGTTAT 59.000 55.000 0.00 0.00 0.00 1.89
3206 3280 0.701731 TGGGTGGAGTTGGGGTTATG 59.298 55.000 0.00 0.00 0.00 1.90
3207 3281 0.702316 GGGTGGAGTTGGGGTTATGT 59.298 55.000 0.00 0.00 0.00 2.29
3208 3282 1.917568 GGGTGGAGTTGGGGTTATGTA 59.082 52.381 0.00 0.00 0.00 2.29
3209 3283 2.309458 GGGTGGAGTTGGGGTTATGTAA 59.691 50.000 0.00 0.00 0.00 2.41
3210 3284 3.349927 GGTGGAGTTGGGGTTATGTAAC 58.650 50.000 0.00 0.00 35.50 2.50
3211 3285 3.009805 GGTGGAGTTGGGGTTATGTAACT 59.990 47.826 3.22 0.00 36.47 2.24
3212 3286 4.507869 GGTGGAGTTGGGGTTATGTAACTT 60.508 45.833 3.22 0.00 36.47 2.66
3213 3287 5.074804 GTGGAGTTGGGGTTATGTAACTTT 58.925 41.667 3.22 0.00 36.47 2.66
3214 3288 5.537295 GTGGAGTTGGGGTTATGTAACTTTT 59.463 40.000 3.22 0.00 36.47 2.27
3215 3289 5.536916 TGGAGTTGGGGTTATGTAACTTTTG 59.463 40.000 3.22 0.00 36.47 2.44
3216 3290 5.537295 GGAGTTGGGGTTATGTAACTTTTGT 59.463 40.000 3.22 0.00 36.47 2.83
3217 3291 6.716173 GGAGTTGGGGTTATGTAACTTTTGTA 59.284 38.462 3.22 0.00 36.47 2.41
3218 3292 7.231115 GGAGTTGGGGTTATGTAACTTTTGTAA 59.769 37.037 3.22 0.00 36.47 2.41
3219 3293 7.944061 AGTTGGGGTTATGTAACTTTTGTAAC 58.056 34.615 3.22 0.00 36.47 2.50
3220 3294 6.897706 TGGGGTTATGTAACTTTTGTAACC 57.102 37.500 4.46 4.46 42.12 2.85
3221 3295 5.472820 TGGGGTTATGTAACTTTTGTAACCG 59.527 40.000 0.00 0.00 43.19 4.44
3222 3296 5.393124 GGGTTATGTAACTTTTGTAACCGC 58.607 41.667 0.00 0.00 43.19 5.68
3223 3297 5.393124 GGTTATGTAACTTTTGTAACCGCC 58.607 41.667 3.22 0.00 36.17 6.13
3224 3298 5.048852 GGTTATGTAACTTTTGTAACCGCCA 60.049 40.000 3.22 0.00 36.17 5.69
3225 3299 6.437094 GTTATGTAACTTTTGTAACCGCCAA 58.563 36.000 0.00 0.00 33.52 4.52
3226 3300 4.290104 TGTAACTTTTGTAACCGCCAAC 57.710 40.909 0.00 0.00 0.00 3.77
3227 3301 2.478547 AACTTTTGTAACCGCCAACG 57.521 45.000 0.00 0.00 39.67 4.10
3228 3302 1.381522 ACTTTTGTAACCGCCAACGT 58.618 45.000 0.00 0.00 37.70 3.99
3229 3303 1.064357 ACTTTTGTAACCGCCAACGTG 59.936 47.619 0.00 0.00 37.70 4.49
3230 3304 0.381089 TTTTGTAACCGCCAACGTGG 59.619 50.000 0.00 0.00 45.89 4.94
3231 3305 0.463295 TTTGTAACCGCCAACGTGGA 60.463 50.000 8.04 0.00 42.83 4.02
3232 3306 0.881159 TTGTAACCGCCAACGTGGAG 60.881 55.000 8.04 4.80 42.83 3.86
3238 3312 4.660938 GCCAACGTGGAGGGGCTT 62.661 66.667 8.04 0.00 40.96 4.35
3239 3313 2.359975 CCAACGTGGAGGGGCTTC 60.360 66.667 0.00 0.00 40.96 3.86
3240 3314 2.750350 CAACGTGGAGGGGCTTCT 59.250 61.111 0.00 0.00 0.00 2.85
3241 3315 1.073199 CAACGTGGAGGGGCTTCTT 59.927 57.895 0.00 0.00 0.00 2.52
3242 3316 0.537371 CAACGTGGAGGGGCTTCTTT 60.537 55.000 0.00 0.00 0.00 2.52
3243 3317 0.537371 AACGTGGAGGGGCTTCTTTG 60.537 55.000 0.00 0.00 0.00 2.77
3244 3318 1.675641 CGTGGAGGGGCTTCTTTGG 60.676 63.158 0.00 0.00 0.00 3.28
3245 3319 1.979155 GTGGAGGGGCTTCTTTGGC 60.979 63.158 0.00 0.00 0.00 4.52
3246 3320 2.162906 TGGAGGGGCTTCTTTGGCT 61.163 57.895 0.00 0.00 0.00 4.75
3247 3321 1.077445 GGAGGGGCTTCTTTGGCTT 59.923 57.895 0.00 0.00 0.00 4.35
3248 3322 0.967887 GGAGGGGCTTCTTTGGCTTC 60.968 60.000 0.00 0.00 0.00 3.86
3249 3323 0.038890 GAGGGGCTTCTTTGGCTTCT 59.961 55.000 0.00 0.00 0.00 2.85
3250 3324 0.484655 AGGGGCTTCTTTGGCTTCTT 59.515 50.000 0.00 0.00 0.00 2.52
3251 3325 1.133041 AGGGGCTTCTTTGGCTTCTTT 60.133 47.619 0.00 0.00 0.00 2.52
3252 3326 1.694150 GGGGCTTCTTTGGCTTCTTTT 59.306 47.619 0.00 0.00 0.00 2.27
3253 3327 2.289072 GGGGCTTCTTTGGCTTCTTTTC 60.289 50.000 0.00 0.00 0.00 2.29
3254 3328 2.289072 GGGCTTCTTTGGCTTCTTTTCC 60.289 50.000 0.00 0.00 0.00 3.13
3255 3329 2.289072 GGCTTCTTTGGCTTCTTTTCCC 60.289 50.000 0.00 0.00 0.00 3.97
3256 3330 2.365293 GCTTCTTTGGCTTCTTTTCCCA 59.635 45.455 0.00 0.00 0.00 4.37
3257 3331 3.007290 GCTTCTTTGGCTTCTTTTCCCAT 59.993 43.478 0.00 0.00 0.00 4.00
3258 3332 4.814147 CTTCTTTGGCTTCTTTTCCCATC 58.186 43.478 0.00 0.00 0.00 3.51
3259 3333 3.165071 TCTTTGGCTTCTTTTCCCATCC 58.835 45.455 0.00 0.00 0.00 3.51
3260 3334 2.999185 TTGGCTTCTTTTCCCATCCT 57.001 45.000 0.00 0.00 0.00 3.24
3261 3335 2.514458 TGGCTTCTTTTCCCATCCTC 57.486 50.000 0.00 0.00 0.00 3.71
3262 3336 1.005924 TGGCTTCTTTTCCCATCCTCC 59.994 52.381 0.00 0.00 0.00 4.30
3263 3337 1.286257 GGCTTCTTTTCCCATCCTCCT 59.714 52.381 0.00 0.00 0.00 3.69
3264 3338 2.649190 GCTTCTTTTCCCATCCTCCTC 58.351 52.381 0.00 0.00 0.00 3.71
3265 3339 2.240921 GCTTCTTTTCCCATCCTCCTCT 59.759 50.000 0.00 0.00 0.00 3.69
3266 3340 3.308760 GCTTCTTTTCCCATCCTCCTCTT 60.309 47.826 0.00 0.00 0.00 2.85
3267 3341 4.812442 GCTTCTTTTCCCATCCTCCTCTTT 60.812 45.833 0.00 0.00 0.00 2.52
3268 3342 5.573707 GCTTCTTTTCCCATCCTCCTCTTTA 60.574 44.000 0.00 0.00 0.00 1.85
3269 3343 6.463053 TTCTTTTCCCATCCTCCTCTTTAA 57.537 37.500 0.00 0.00 0.00 1.52
3270 3344 6.658555 TCTTTTCCCATCCTCCTCTTTAAT 57.341 37.500 0.00 0.00 0.00 1.40
3271 3345 7.765149 TCTTTTCCCATCCTCCTCTTTAATA 57.235 36.000 0.00 0.00 0.00 0.98
3272 3346 7.574607 TCTTTTCCCATCCTCCTCTTTAATAC 58.425 38.462 0.00 0.00 0.00 1.89
3273 3347 6.901615 TTTCCCATCCTCCTCTTTAATACA 57.098 37.500 0.00 0.00 0.00 2.29
3274 3348 7.465900 TTTCCCATCCTCCTCTTTAATACAT 57.534 36.000 0.00 0.00 0.00 2.29
3275 3349 8.575736 TTTCCCATCCTCCTCTTTAATACATA 57.424 34.615 0.00 0.00 0.00 2.29
3276 3350 7.798710 TCCCATCCTCCTCTTTAATACATAG 57.201 40.000 0.00 0.00 0.00 2.23
3277 3351 7.313731 TCCCATCCTCCTCTTTAATACATAGT 58.686 38.462 0.00 0.00 0.00 2.12
3278 3352 8.461854 TCCCATCCTCCTCTTTAATACATAGTA 58.538 37.037 0.00 0.00 0.00 1.82
3279 3353 9.273137 CCCATCCTCCTCTTTAATACATAGTAT 57.727 37.037 0.00 0.00 0.00 2.12
3281 3355 9.593134 CATCCTCCTCTTTAATACATAGTATGC 57.407 37.037 10.16 0.00 0.00 3.14
3282 3356 8.721133 TCCTCCTCTTTAATACATAGTATGCA 57.279 34.615 10.16 0.00 0.00 3.96
3283 3357 8.585881 TCCTCCTCTTTAATACATAGTATGCAC 58.414 37.037 10.16 0.00 0.00 4.57
3284 3358 8.367911 CCTCCTCTTTAATACATAGTATGCACA 58.632 37.037 10.16 0.00 0.00 4.57
3285 3359 9.197694 CTCCTCTTTAATACATAGTATGCACAC 57.802 37.037 10.16 0.00 0.00 3.82
3286 3360 8.924303 TCCTCTTTAATACATAGTATGCACACT 58.076 33.333 1.85 1.85 0.00 3.55
3287 3361 9.197694 CCTCTTTAATACATAGTATGCACACTC 57.802 37.037 0.00 0.00 0.00 3.51
3288 3362 8.797266 TCTTTAATACATAGTATGCACACTCG 57.203 34.615 0.00 0.00 0.00 4.18
3289 3363 8.410912 TCTTTAATACATAGTATGCACACTCGT 58.589 33.333 0.00 2.84 0.00 4.18
3290 3364 7.924103 TTAATACATAGTATGCACACTCGTG 57.076 36.000 0.00 4.82 46.56 4.35
3291 3365 3.868757 ACATAGTATGCACACTCGTGT 57.131 42.857 0.00 5.53 45.50 4.49
3378 3452 2.465097 TATTGCCCGTGCGTTGCAAC 62.465 55.000 19.89 19.89 46.60 4.17
3468 3542 3.670627 CGAAAATGGACTTAGCTGCCAAC 60.671 47.826 0.00 0.00 34.95 3.77
3525 3599 2.039879 GGTCACCCAATAAGTGAGGTGT 59.960 50.000 7.82 0.00 44.57 4.16
3526 3600 3.262405 GGTCACCCAATAAGTGAGGTGTA 59.738 47.826 7.82 0.00 44.57 2.90
3527 3601 4.504858 GTCACCCAATAAGTGAGGTGTAG 58.495 47.826 7.82 0.00 44.57 2.74
3528 3602 3.055385 TCACCCAATAAGTGAGGTGTAGC 60.055 47.826 7.82 0.00 43.61 3.58
3529 3603 2.093658 ACCCAATAAGTGAGGTGTAGCG 60.094 50.000 0.00 0.00 31.68 4.26
3530 3604 1.933853 CCAATAAGTGAGGTGTAGCGC 59.066 52.381 0.00 0.00 0.00 5.92
3531 3605 2.418746 CCAATAAGTGAGGTGTAGCGCT 60.419 50.000 17.26 17.26 0.00 5.92
3532 3606 3.181479 CCAATAAGTGAGGTGTAGCGCTA 60.181 47.826 14.45 14.45 0.00 4.26
3533 3607 3.992260 ATAAGTGAGGTGTAGCGCTAG 57.008 47.619 19.48 0.00 0.00 3.42
3534 3608 0.818296 AAGTGAGGTGTAGCGCTAGG 59.182 55.000 19.48 0.00 0.00 3.02
3535 3609 1.038130 AGTGAGGTGTAGCGCTAGGG 61.038 60.000 19.48 1.65 0.00 3.53
3536 3610 1.035932 GTGAGGTGTAGCGCTAGGGA 61.036 60.000 19.48 1.54 0.00 4.20
3537 3611 0.106167 TGAGGTGTAGCGCTAGGGAT 60.106 55.000 19.48 6.93 0.00 3.85
3538 3612 0.599060 GAGGTGTAGCGCTAGGGATC 59.401 60.000 19.48 10.42 0.00 3.36
3539 3613 0.106167 AGGTGTAGCGCTAGGGATCA 60.106 55.000 19.48 9.12 0.00 2.92
3540 3614 0.315568 GGTGTAGCGCTAGGGATCAG 59.684 60.000 19.48 0.00 0.00 2.90
3541 3615 1.319541 GTGTAGCGCTAGGGATCAGA 58.680 55.000 19.48 0.00 0.00 3.27
3542 3616 1.001158 GTGTAGCGCTAGGGATCAGAC 60.001 57.143 19.48 5.73 0.00 3.51
3543 3617 1.133761 TGTAGCGCTAGGGATCAGACT 60.134 52.381 19.48 0.00 0.00 3.24
3544 3618 2.105993 TGTAGCGCTAGGGATCAGACTA 59.894 50.000 19.48 0.00 0.00 2.59
3545 3619 1.611519 AGCGCTAGGGATCAGACTAC 58.388 55.000 8.99 0.00 0.00 2.73
3546 3620 1.144093 AGCGCTAGGGATCAGACTACT 59.856 52.381 8.99 0.00 0.00 2.57
3547 3621 1.268352 GCGCTAGGGATCAGACTACTG 59.732 57.143 11.61 0.00 44.66 2.74
3557 3631 3.107402 TCAGACTACTGATCCCTTGCT 57.893 47.619 0.00 0.00 46.55 3.91
3558 3632 3.027412 TCAGACTACTGATCCCTTGCTC 58.973 50.000 0.00 0.00 46.55 4.26
3559 3633 3.030291 CAGACTACTGATCCCTTGCTCT 58.970 50.000 0.00 0.00 46.03 4.09
3560 3634 3.450457 CAGACTACTGATCCCTTGCTCTT 59.550 47.826 0.00 0.00 46.03 2.85
3561 3635 4.646945 CAGACTACTGATCCCTTGCTCTTA 59.353 45.833 0.00 0.00 46.03 2.10
3562 3636 5.304101 CAGACTACTGATCCCTTGCTCTTAT 59.696 44.000 0.00 0.00 46.03 1.73
3563 3637 5.538433 AGACTACTGATCCCTTGCTCTTATC 59.462 44.000 0.00 0.00 0.00 1.75
3564 3638 5.211973 ACTACTGATCCCTTGCTCTTATCA 58.788 41.667 0.00 0.00 0.00 2.15
3565 3639 4.686191 ACTGATCCCTTGCTCTTATCAG 57.314 45.455 8.65 8.65 45.78 2.90
3566 3640 4.293494 ACTGATCCCTTGCTCTTATCAGA 58.707 43.478 15.44 0.00 44.01 3.27
3567 3641 4.100808 ACTGATCCCTTGCTCTTATCAGAC 59.899 45.833 15.44 0.00 44.01 3.51
3568 3642 4.293494 TGATCCCTTGCTCTTATCAGACT 58.707 43.478 0.00 0.00 0.00 3.24
3569 3643 5.458595 TGATCCCTTGCTCTTATCAGACTA 58.541 41.667 0.00 0.00 0.00 2.59
3570 3644 5.538053 TGATCCCTTGCTCTTATCAGACTAG 59.462 44.000 0.00 0.00 0.00 2.57
3571 3645 4.873010 TCCCTTGCTCTTATCAGACTAGT 58.127 43.478 0.00 0.00 0.00 2.57
3572 3646 5.273208 TCCCTTGCTCTTATCAGACTAGTT 58.727 41.667 0.00 0.00 0.00 2.24
3573 3647 5.361285 TCCCTTGCTCTTATCAGACTAGTTC 59.639 44.000 0.00 0.00 0.00 3.01
3574 3648 5.127845 CCCTTGCTCTTATCAGACTAGTTCA 59.872 44.000 0.00 0.00 0.00 3.18
3575 3649 6.351371 CCCTTGCTCTTATCAGACTAGTTCAA 60.351 42.308 0.00 0.00 0.00 2.69
3576 3650 6.756074 CCTTGCTCTTATCAGACTAGTTCAAG 59.244 42.308 0.00 0.00 0.00 3.02
3577 3651 7.363355 CCTTGCTCTTATCAGACTAGTTCAAGA 60.363 40.741 0.00 1.70 0.00 3.02
3578 3652 6.857956 TGCTCTTATCAGACTAGTTCAAGAC 58.142 40.000 0.00 0.00 0.00 3.01
3579 3653 6.127591 TGCTCTTATCAGACTAGTTCAAGACC 60.128 42.308 0.00 0.00 0.00 3.85
3580 3654 6.438259 TCTTATCAGACTAGTTCAAGACCG 57.562 41.667 0.00 0.00 0.00 4.79
3581 3655 5.944599 TCTTATCAGACTAGTTCAAGACCGT 59.055 40.000 0.00 0.00 0.00 4.83
3582 3656 7.108194 TCTTATCAGACTAGTTCAAGACCGTA 58.892 38.462 0.00 0.00 0.00 4.02
3583 3657 5.821516 ATCAGACTAGTTCAAGACCGTAG 57.178 43.478 0.00 0.00 0.00 3.51
3600 3674 3.891324 CGTAGGATAGAAGCACAGTAGC 58.109 50.000 0.00 0.00 0.00 3.58
3601 3675 3.304794 CGTAGGATAGAAGCACAGTAGCC 60.305 52.174 0.00 0.00 34.23 3.93
3602 3676 1.683917 AGGATAGAAGCACAGTAGCCG 59.316 52.381 0.00 0.00 34.23 5.52
3603 3677 1.409427 GGATAGAAGCACAGTAGCCGT 59.591 52.381 0.00 0.00 34.23 5.68
3604 3678 2.544069 GGATAGAAGCACAGTAGCCGTC 60.544 54.545 0.00 0.00 34.23 4.79
3605 3679 0.815734 TAGAAGCACAGTAGCCGTCC 59.184 55.000 0.00 0.00 34.23 4.79
3606 3680 1.805945 GAAGCACAGTAGCCGTCCG 60.806 63.158 0.00 0.00 34.23 4.79
3607 3681 2.209064 GAAGCACAGTAGCCGTCCGA 62.209 60.000 0.00 0.00 34.23 4.55
3608 3682 1.605058 AAGCACAGTAGCCGTCCGAT 61.605 55.000 0.00 0.00 34.23 4.18
3609 3683 1.589196 GCACAGTAGCCGTCCGATC 60.589 63.158 0.00 0.00 0.00 3.69
3610 3684 2.005960 GCACAGTAGCCGTCCGATCT 62.006 60.000 0.00 0.00 0.00 2.75
3611 3685 0.456221 CACAGTAGCCGTCCGATCTT 59.544 55.000 0.00 0.00 0.00 2.40
3612 3686 0.739561 ACAGTAGCCGTCCGATCTTC 59.260 55.000 0.00 0.00 0.00 2.87
3613 3687 1.025812 CAGTAGCCGTCCGATCTTCT 58.974 55.000 0.00 0.00 0.00 2.85
3614 3688 2.219458 CAGTAGCCGTCCGATCTTCTA 58.781 52.381 0.00 0.00 0.00 2.10
3615 3689 2.224549 CAGTAGCCGTCCGATCTTCTAG 59.775 54.545 0.00 0.00 0.00 2.43
3616 3690 1.069091 GTAGCCGTCCGATCTTCTAGC 60.069 57.143 0.00 0.00 0.00 3.42
3617 3691 0.752009 AGCCGTCCGATCTTCTAGCA 60.752 55.000 0.00 0.00 0.00 3.49
3618 3692 0.315568 GCCGTCCGATCTTCTAGCAT 59.684 55.000 0.00 0.00 0.00 3.79
3619 3693 1.932604 GCCGTCCGATCTTCTAGCATG 60.933 57.143 0.00 0.00 0.00 4.06
3620 3694 1.336332 CCGTCCGATCTTCTAGCATGG 60.336 57.143 0.00 0.00 0.00 3.66
3621 3695 1.789506 GTCCGATCTTCTAGCATGGC 58.210 55.000 0.00 0.00 0.00 4.40
3622 3696 0.681733 TCCGATCTTCTAGCATGGCC 59.318 55.000 0.00 0.00 0.00 5.36
3623 3697 0.321122 CCGATCTTCTAGCATGGCCC 60.321 60.000 0.00 0.00 0.00 5.80
3624 3698 0.668706 CGATCTTCTAGCATGGCCCG 60.669 60.000 0.00 0.00 0.00 6.13
3625 3699 0.952984 GATCTTCTAGCATGGCCCGC 60.953 60.000 0.00 2.40 0.00 6.13
3626 3700 1.699054 ATCTTCTAGCATGGCCCGCA 61.699 55.000 15.96 2.38 0.00 5.69
3627 3701 2.124736 TTCTAGCATGGCCCGCAC 60.125 61.111 15.96 0.00 0.00 5.34
3628 3702 2.874648 CTTCTAGCATGGCCCGCACA 62.875 60.000 15.96 3.21 0.00 4.57
3629 3703 2.203252 CTAGCATGGCCCGCACAT 60.203 61.111 15.96 0.00 0.00 3.21
3630 3704 2.516695 TAGCATGGCCCGCACATG 60.517 61.111 15.96 6.35 46.45 3.21
3631 3705 2.946172 CTAGCATGGCCCGCACATGA 62.946 60.000 15.96 0.00 46.60 3.07
3632 3706 2.342073 TAGCATGGCCCGCACATGAT 62.342 55.000 15.96 14.41 46.60 2.45
3633 3707 2.788640 GCATGGCCCGCACATGATT 61.789 57.895 17.13 0.00 46.60 2.57
3634 3708 1.817881 CATGGCCCGCACATGATTT 59.182 52.632 0.00 0.00 46.60 2.17
3635 3709 0.528901 CATGGCCCGCACATGATTTG 60.529 55.000 0.00 0.00 46.60 2.32
3636 3710 2.202783 GGCCCGCACATGATTTGC 60.203 61.111 0.00 0.00 36.57 3.68
3637 3711 2.713967 GGCCCGCACATGATTTGCT 61.714 57.895 0.00 0.00 37.87 3.91
3638 3712 1.517694 GCCCGCACATGATTTGCTG 60.518 57.895 0.00 0.00 37.87 4.41
3639 3713 1.936436 GCCCGCACATGATTTGCTGA 61.936 55.000 0.00 0.00 37.87 4.26
3640 3714 0.527113 CCCGCACATGATTTGCTGAA 59.473 50.000 0.00 0.00 37.87 3.02
3641 3715 1.135527 CCCGCACATGATTTGCTGAAT 59.864 47.619 0.00 0.00 37.87 2.57
3642 3716 2.417651 CCCGCACATGATTTGCTGAATT 60.418 45.455 0.00 0.00 37.87 2.17
3643 3717 2.601314 CCGCACATGATTTGCTGAATTG 59.399 45.455 0.00 0.00 37.87 2.32
3644 3718 3.503891 CGCACATGATTTGCTGAATTGA 58.496 40.909 0.00 0.00 37.87 2.57
3645 3719 4.109766 CGCACATGATTTGCTGAATTGAT 58.890 39.130 0.00 0.00 37.87 2.57
3646 3720 4.565166 CGCACATGATTTGCTGAATTGATT 59.435 37.500 0.00 0.00 37.87 2.57
3647 3721 5.276207 CGCACATGATTTGCTGAATTGATTC 60.276 40.000 0.00 0.00 37.87 2.52
3648 3722 5.276207 GCACATGATTTGCTGAATTGATTCG 60.276 40.000 0.00 0.00 39.62 3.34
3649 3723 5.803461 CACATGATTTGCTGAATTGATTCGT 59.197 36.000 0.00 0.00 39.62 3.85
3650 3724 6.309494 CACATGATTTGCTGAATTGATTCGTT 59.691 34.615 0.00 0.00 39.62 3.85
3651 3725 6.309494 ACATGATTTGCTGAATTGATTCGTTG 59.691 34.615 0.00 0.00 39.62 4.10
3652 3726 5.771469 TGATTTGCTGAATTGATTCGTTGT 58.229 33.333 0.00 0.00 39.62 3.32
3653 3727 6.907741 TGATTTGCTGAATTGATTCGTTGTA 58.092 32.000 0.00 0.00 39.62 2.41
3654 3728 7.366513 TGATTTGCTGAATTGATTCGTTGTAA 58.633 30.769 0.00 0.00 39.62 2.41
3655 3729 7.538334 TGATTTGCTGAATTGATTCGTTGTAAG 59.462 33.333 0.00 0.00 39.62 2.34
3656 3730 5.940192 TGCTGAATTGATTCGTTGTAAGT 57.060 34.783 0.00 0.00 39.62 2.24
3657 3731 5.688823 TGCTGAATTGATTCGTTGTAAGTG 58.311 37.500 0.00 0.00 39.62 3.16
3658 3732 5.468409 TGCTGAATTGATTCGTTGTAAGTGA 59.532 36.000 0.00 0.00 39.62 3.41
3659 3733 6.149308 TGCTGAATTGATTCGTTGTAAGTGAT 59.851 34.615 0.00 0.00 39.62 3.06
3660 3734 7.023575 GCTGAATTGATTCGTTGTAAGTGATT 58.976 34.615 0.00 0.00 39.62 2.57
3661 3735 7.007725 GCTGAATTGATTCGTTGTAAGTGATTG 59.992 37.037 0.00 0.00 39.62 2.67
3662 3736 6.801377 TGAATTGATTCGTTGTAAGTGATTGC 59.199 34.615 0.00 0.00 39.62 3.56
3663 3737 5.940192 TTGATTCGTTGTAAGTGATTGCT 57.060 34.783 0.00 0.00 0.00 3.91
3664 3738 5.940192 TGATTCGTTGTAAGTGATTGCTT 57.060 34.783 0.00 0.00 0.00 3.91
3665 3739 5.927030 TGATTCGTTGTAAGTGATTGCTTC 58.073 37.500 0.00 0.00 0.00 3.86
3666 3740 4.742438 TTCGTTGTAAGTGATTGCTTCC 57.258 40.909 0.00 0.00 0.00 3.46
3667 3741 4.002906 TCGTTGTAAGTGATTGCTTCCT 57.997 40.909 0.00 0.00 0.00 3.36
3668 3742 3.745975 TCGTTGTAAGTGATTGCTTCCTG 59.254 43.478 0.00 0.00 0.00 3.86
3669 3743 3.498397 CGTTGTAAGTGATTGCTTCCTGT 59.502 43.478 0.00 0.00 0.00 4.00
3670 3744 4.688879 CGTTGTAAGTGATTGCTTCCTGTA 59.311 41.667 0.00 0.00 0.00 2.74
3671 3745 5.178623 CGTTGTAAGTGATTGCTTCCTGTAA 59.821 40.000 0.00 0.00 0.00 2.41
3672 3746 6.371389 GTTGTAAGTGATTGCTTCCTGTAAC 58.629 40.000 0.00 0.00 0.00 2.50
3673 3747 5.865085 TGTAAGTGATTGCTTCCTGTAACT 58.135 37.500 0.00 0.00 0.00 2.24
3674 3748 5.700832 TGTAAGTGATTGCTTCCTGTAACTG 59.299 40.000 0.00 0.00 0.00 3.16
3675 3749 3.077359 AGTGATTGCTTCCTGTAACTGC 58.923 45.455 0.00 0.00 0.00 4.40
3676 3750 3.077359 GTGATTGCTTCCTGTAACTGCT 58.923 45.455 0.00 0.00 0.00 4.24
3677 3751 3.503748 GTGATTGCTTCCTGTAACTGCTT 59.496 43.478 0.00 0.00 0.00 3.91
3678 3752 3.753272 TGATTGCTTCCTGTAACTGCTTC 59.247 43.478 0.00 0.00 0.00 3.86
3679 3753 2.185004 TGCTTCCTGTAACTGCTTCC 57.815 50.000 0.00 0.00 0.00 3.46
3680 3754 1.419762 TGCTTCCTGTAACTGCTTCCA 59.580 47.619 0.00 0.00 0.00 3.53
3681 3755 1.807142 GCTTCCTGTAACTGCTTCCAC 59.193 52.381 0.00 0.00 0.00 4.02
3682 3756 2.551071 GCTTCCTGTAACTGCTTCCACT 60.551 50.000 0.00 0.00 0.00 4.00
3683 3757 3.306780 GCTTCCTGTAACTGCTTCCACTA 60.307 47.826 0.00 0.00 0.00 2.74
3684 3758 4.802918 GCTTCCTGTAACTGCTTCCACTAA 60.803 45.833 0.00 0.00 0.00 2.24
3685 3759 4.967084 TCCTGTAACTGCTTCCACTAAA 57.033 40.909 0.00 0.00 0.00 1.85
3686 3760 4.638304 TCCTGTAACTGCTTCCACTAAAC 58.362 43.478 0.00 0.00 0.00 2.01
3687 3761 4.101898 TCCTGTAACTGCTTCCACTAAACA 59.898 41.667 0.00 0.00 0.00 2.83
3688 3762 4.213482 CCTGTAACTGCTTCCACTAAACAC 59.787 45.833 0.00 0.00 0.00 3.32
3689 3763 3.805422 TGTAACTGCTTCCACTAAACACG 59.195 43.478 0.00 0.00 0.00 4.49
3690 3764 1.226746 ACTGCTTCCACTAAACACGC 58.773 50.000 0.00 0.00 0.00 5.34
3691 3765 0.517316 CTGCTTCCACTAAACACGCC 59.483 55.000 0.00 0.00 0.00 5.68
3692 3766 1.225376 TGCTTCCACTAAACACGCCG 61.225 55.000 0.00 0.00 0.00 6.46
3693 3767 1.908066 GCTTCCACTAAACACGCCGG 61.908 60.000 0.00 0.00 0.00 6.13
3694 3768 1.908066 CTTCCACTAAACACGCCGGC 61.908 60.000 19.07 19.07 0.00 6.13
3695 3769 2.358247 CCACTAAACACGCCGGCT 60.358 61.111 26.68 7.77 0.00 5.52
3696 3770 1.079681 CCACTAAACACGCCGGCTA 60.080 57.895 26.68 8.66 0.00 3.93
3697 3771 1.356527 CCACTAAACACGCCGGCTAC 61.357 60.000 26.68 0.00 0.00 3.58
3698 3772 0.668096 CACTAAACACGCCGGCTACA 60.668 55.000 26.68 2.25 0.00 2.74
3699 3773 0.248289 ACTAAACACGCCGGCTACAT 59.752 50.000 26.68 9.35 0.00 2.29
3700 3774 1.338389 ACTAAACACGCCGGCTACATT 60.338 47.619 26.68 16.33 0.00 2.71
3701 3775 1.326548 CTAAACACGCCGGCTACATTC 59.673 52.381 26.68 0.00 0.00 2.67
3702 3776 1.632046 AAACACGCCGGCTACATTCG 61.632 55.000 26.68 9.51 0.00 3.34
3703 3777 3.925238 CACGCCGGCTACATTCGC 61.925 66.667 26.68 0.00 0.00 4.70
3709 3783 3.724494 GGCTACATTCGCCAGCTC 58.276 61.111 0.00 0.00 46.77 4.09
3710 3784 1.889573 GGCTACATTCGCCAGCTCC 60.890 63.158 0.00 0.00 46.77 4.70
3711 3785 1.144936 GCTACATTCGCCAGCTCCT 59.855 57.895 0.00 0.00 32.46 3.69
3712 3786 0.462759 GCTACATTCGCCAGCTCCTT 60.463 55.000 0.00 0.00 32.46 3.36
3713 3787 1.576356 CTACATTCGCCAGCTCCTTC 58.424 55.000 0.00 0.00 0.00 3.46
3714 3788 0.178068 TACATTCGCCAGCTCCTTCC 59.822 55.000 0.00 0.00 0.00 3.46
3715 3789 1.222936 CATTCGCCAGCTCCTTCCT 59.777 57.895 0.00 0.00 0.00 3.36
3716 3790 0.393537 CATTCGCCAGCTCCTTCCTT 60.394 55.000 0.00 0.00 0.00 3.36
3717 3791 0.329596 ATTCGCCAGCTCCTTCCTTT 59.670 50.000 0.00 0.00 0.00 3.11
3718 3792 0.606401 TTCGCCAGCTCCTTCCTTTG 60.606 55.000 0.00 0.00 0.00 2.77
3719 3793 2.694760 CGCCAGCTCCTTCCTTTGC 61.695 63.158 0.00 0.00 0.00 3.68
3720 3794 1.303970 GCCAGCTCCTTCCTTTGCT 60.304 57.895 0.00 0.00 36.04 3.91
3721 3795 0.897401 GCCAGCTCCTTCCTTTGCTT 60.897 55.000 0.00 0.00 33.03 3.91
3722 3796 1.172175 CCAGCTCCTTCCTTTGCTTC 58.828 55.000 0.00 0.00 33.03 3.86
3723 3797 1.172175 CAGCTCCTTCCTTTGCTTCC 58.828 55.000 0.00 0.00 33.03 3.46
3724 3798 1.071434 AGCTCCTTCCTTTGCTTCCT 58.929 50.000 0.00 0.00 30.96 3.36
3725 3799 1.004161 AGCTCCTTCCTTTGCTTCCTC 59.996 52.381 0.00 0.00 30.96 3.71
3726 3800 1.952839 GCTCCTTCCTTTGCTTCCTCC 60.953 57.143 0.00 0.00 0.00 4.30
3727 3801 1.632920 CTCCTTCCTTTGCTTCCTCCT 59.367 52.381 0.00 0.00 0.00 3.69
3728 3802 2.840651 CTCCTTCCTTTGCTTCCTCCTA 59.159 50.000 0.00 0.00 0.00 2.94
3729 3803 2.840651 TCCTTCCTTTGCTTCCTCCTAG 59.159 50.000 0.00 0.00 0.00 3.02
3730 3804 2.573915 CCTTCCTTTGCTTCCTCCTAGT 59.426 50.000 0.00 0.00 0.00 2.57
3731 3805 3.775316 CCTTCCTTTGCTTCCTCCTAGTA 59.225 47.826 0.00 0.00 0.00 1.82
3732 3806 4.225267 CCTTCCTTTGCTTCCTCCTAGTAA 59.775 45.833 0.00 0.00 0.00 2.24
3733 3807 5.104318 CCTTCCTTTGCTTCCTCCTAGTAAT 60.104 44.000 0.00 0.00 0.00 1.89
3734 3808 6.388619 TTCCTTTGCTTCCTCCTAGTAATT 57.611 37.500 0.00 0.00 0.00 1.40
3735 3809 5.745227 TCCTTTGCTTCCTCCTAGTAATTG 58.255 41.667 0.00 0.00 0.00 2.32
3736 3810 5.487488 TCCTTTGCTTCCTCCTAGTAATTGA 59.513 40.000 0.00 0.00 0.00 2.57
3737 3811 5.586643 CCTTTGCTTCCTCCTAGTAATTGAC 59.413 44.000 0.00 0.00 0.00 3.18
3738 3812 6.374417 TTTGCTTCCTCCTAGTAATTGACT 57.626 37.500 0.00 0.00 42.69 3.41
3739 3813 5.344743 TGCTTCCTCCTAGTAATTGACTG 57.655 43.478 0.00 0.00 39.39 3.51
3740 3814 4.123506 GCTTCCTCCTAGTAATTGACTGC 58.876 47.826 0.00 0.00 39.39 4.40
3741 3815 4.141824 GCTTCCTCCTAGTAATTGACTGCT 60.142 45.833 0.00 0.00 39.39 4.24
3742 3816 5.627968 GCTTCCTCCTAGTAATTGACTGCTT 60.628 44.000 0.00 0.00 39.39 3.91
3743 3817 5.599999 TCCTCCTAGTAATTGACTGCTTC 57.400 43.478 0.00 0.00 39.39 3.86
3744 3818 4.406003 TCCTCCTAGTAATTGACTGCTTCC 59.594 45.833 0.00 0.00 39.39 3.46
3745 3819 4.443598 CCTCCTAGTAATTGACTGCTTCCC 60.444 50.000 0.00 0.00 39.39 3.97
3746 3820 4.101114 TCCTAGTAATTGACTGCTTCCCA 58.899 43.478 0.00 0.00 39.39 4.37
3747 3821 4.721776 TCCTAGTAATTGACTGCTTCCCAT 59.278 41.667 0.00 0.00 39.39 4.00
3748 3822 5.903010 TCCTAGTAATTGACTGCTTCCCATA 59.097 40.000 0.00 0.00 39.39 2.74
3749 3823 6.385759 TCCTAGTAATTGACTGCTTCCCATAA 59.614 38.462 0.00 0.00 39.39 1.90
3750 3824 7.054124 CCTAGTAATTGACTGCTTCCCATAAA 58.946 38.462 0.00 0.00 39.39 1.40
3751 3825 7.721399 CCTAGTAATTGACTGCTTCCCATAAAT 59.279 37.037 0.00 0.00 39.39 1.40
3752 3826 7.573968 AGTAATTGACTGCTTCCCATAAATC 57.426 36.000 0.00 0.00 36.87 2.17
3753 3827 7.118723 AGTAATTGACTGCTTCCCATAAATCA 58.881 34.615 0.00 0.00 36.87 2.57
3754 3828 5.841957 ATTGACTGCTTCCCATAAATCAC 57.158 39.130 0.00 0.00 0.00 3.06
3755 3829 3.270027 TGACTGCTTCCCATAAATCACG 58.730 45.455 0.00 0.00 0.00 4.35
3756 3830 2.017049 ACTGCTTCCCATAAATCACGC 58.983 47.619 0.00 0.00 0.00 5.34
3757 3831 2.292267 CTGCTTCCCATAAATCACGCT 58.708 47.619 0.00 0.00 0.00 5.07
3758 3832 3.118408 ACTGCTTCCCATAAATCACGCTA 60.118 43.478 0.00 0.00 0.00 4.26
3759 3833 3.202906 TGCTTCCCATAAATCACGCTAC 58.797 45.455 0.00 0.00 0.00 3.58
3760 3834 3.118408 TGCTTCCCATAAATCACGCTACT 60.118 43.478 0.00 0.00 0.00 2.57
3761 3835 4.100344 TGCTTCCCATAAATCACGCTACTA 59.900 41.667 0.00 0.00 0.00 1.82
3762 3836 5.054477 GCTTCCCATAAATCACGCTACTAA 58.946 41.667 0.00 0.00 0.00 2.24
3763 3837 5.701290 GCTTCCCATAAATCACGCTACTAAT 59.299 40.000 0.00 0.00 0.00 1.73
3764 3838 6.204882 GCTTCCCATAAATCACGCTACTAATT 59.795 38.462 0.00 0.00 0.00 1.40
3765 3839 7.490962 TTCCCATAAATCACGCTACTAATTG 57.509 36.000 0.00 0.00 0.00 2.32
3766 3840 6.822442 TCCCATAAATCACGCTACTAATTGA 58.178 36.000 0.00 0.00 0.00 2.57
3767 3841 6.704493 TCCCATAAATCACGCTACTAATTGAC 59.296 38.462 0.00 0.00 0.00 3.18
3768 3842 6.706270 CCCATAAATCACGCTACTAATTGACT 59.294 38.462 0.00 0.00 0.00 3.41
3769 3843 7.307396 CCCATAAATCACGCTACTAATTGACTG 60.307 40.741 0.00 0.00 0.00 3.51
3770 3844 5.470845 AAATCACGCTACTAATTGACTGC 57.529 39.130 0.00 0.00 0.00 4.40
3771 3845 3.868757 TCACGCTACTAATTGACTGCT 57.131 42.857 0.00 0.00 0.00 4.24
3772 3846 4.188247 TCACGCTACTAATTGACTGCTT 57.812 40.909 0.00 0.00 0.00 3.91
3773 3847 4.174009 TCACGCTACTAATTGACTGCTTC 58.826 43.478 0.00 0.00 0.00 3.86
3774 3848 3.307242 CACGCTACTAATTGACTGCTTCC 59.693 47.826 0.00 0.00 0.00 3.46
3775 3849 3.195825 ACGCTACTAATTGACTGCTTCCT 59.804 43.478 0.00 0.00 0.00 3.36
3776 3850 3.553511 CGCTACTAATTGACTGCTTCCTG 59.446 47.826 0.00 0.00 0.00 3.86
3777 3851 4.508662 GCTACTAATTGACTGCTTCCTGT 58.491 43.478 0.00 0.00 0.00 4.00
3778 3852 5.661458 GCTACTAATTGACTGCTTCCTGTA 58.339 41.667 0.00 0.00 0.00 2.74
3779 3853 6.106673 GCTACTAATTGACTGCTTCCTGTAA 58.893 40.000 0.00 0.00 0.00 2.41
3780 3854 6.036191 GCTACTAATTGACTGCTTCCTGTAAC 59.964 42.308 0.00 0.00 0.00 2.50
3781 3855 5.865085 ACTAATTGACTGCTTCCTGTAACA 58.135 37.500 0.00 0.00 0.00 2.41
3782 3856 6.296026 ACTAATTGACTGCTTCCTGTAACAA 58.704 36.000 0.00 0.00 0.00 2.83
3783 3857 5.438761 AATTGACTGCTTCCTGTAACAAC 57.561 39.130 0.00 0.00 0.00 3.32
3784 3858 3.838244 TGACTGCTTCCTGTAACAACT 57.162 42.857 0.00 0.00 0.00 3.16
3785 3859 3.466836 TGACTGCTTCCTGTAACAACTG 58.533 45.455 0.00 0.00 0.00 3.16
3786 3860 2.222027 ACTGCTTCCTGTAACAACTGC 58.778 47.619 0.00 0.00 0.00 4.40
3787 3861 2.221169 CTGCTTCCTGTAACAACTGCA 58.779 47.619 0.00 0.00 0.00 4.41
3788 3862 2.816087 CTGCTTCCTGTAACAACTGCAT 59.184 45.455 0.00 0.00 0.00 3.96
3789 3863 2.813754 TGCTTCCTGTAACAACTGCATC 59.186 45.455 0.00 0.00 0.00 3.91
3790 3864 2.159653 GCTTCCTGTAACAACTGCATCG 60.160 50.000 0.00 0.00 0.00 3.84
3791 3865 2.093306 TCCTGTAACAACTGCATCGG 57.907 50.000 0.00 0.00 0.00 4.18
3792 3866 1.621317 TCCTGTAACAACTGCATCGGA 59.379 47.619 0.00 0.00 0.00 4.55
3793 3867 2.037902 TCCTGTAACAACTGCATCGGAA 59.962 45.455 0.00 0.00 0.00 4.30
3794 3868 3.009723 CCTGTAACAACTGCATCGGAAT 58.990 45.455 0.00 0.00 0.00 3.01
3795 3869 3.440173 CCTGTAACAACTGCATCGGAATT 59.560 43.478 0.00 0.00 0.00 2.17
3796 3870 4.437390 CCTGTAACAACTGCATCGGAATTC 60.437 45.833 0.00 0.00 0.00 2.17
3797 3871 2.900122 AACAACTGCATCGGAATTCG 57.100 45.000 0.00 0.00 40.90 3.34
3798 3872 1.086696 ACAACTGCATCGGAATTCGG 58.913 50.000 6.67 6.67 39.77 4.30
3799 3873 0.248215 CAACTGCATCGGAATTCGGC 60.248 55.000 8.09 5.75 39.77 5.54
3800 3874 0.392998 AACTGCATCGGAATTCGGCT 60.393 50.000 8.09 0.00 39.77 5.52
3801 3875 0.464036 ACTGCATCGGAATTCGGCTA 59.536 50.000 8.09 0.00 39.77 3.93
3802 3876 1.143305 CTGCATCGGAATTCGGCTAG 58.857 55.000 8.09 2.33 39.77 3.42
3803 3877 0.464036 TGCATCGGAATTCGGCTAGT 59.536 50.000 8.09 0.00 39.77 2.57
3804 3878 1.134521 TGCATCGGAATTCGGCTAGTT 60.135 47.619 8.09 0.00 39.77 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.598882 GCCTACTAATTCCCAGCAGC 58.401 55.000 0.00 0.00 0.00 5.25
158 159 8.055279 TGGCTCAAGGTTTTTCAATTATAGAG 57.945 34.615 0.00 0.00 0.00 2.43
208 209 6.209774 TCTATTCCACCTAAAGATTCCCTCA 58.790 40.000 0.00 0.00 0.00 3.86
214 215 9.343539 GCAGTAAATCTATTCCACCTAAAGATT 57.656 33.333 0.00 0.00 38.27 2.40
230 231 5.428184 AAGGTGAGCTTAGCAGTAAATCT 57.572 39.130 10.55 0.00 0.00 2.40
233 234 7.996098 AAAATAAGGTGAGCTTAGCAGTAAA 57.004 32.000 10.55 0.00 0.00 2.01
248 249 9.271828 CAGGTAAGAAAATTGCAAAAATAAGGT 57.728 29.630 1.71 0.00 0.00 3.50
249 250 9.487790 TCAGGTAAGAAAATTGCAAAAATAAGG 57.512 29.630 1.71 0.00 0.00 2.69
306 307 0.109132 GCATGCTTCCCGGAAAGTTG 60.109 55.000 11.37 1.53 0.00 3.16
349 350 2.038863 ACCACCAGTGTAGGATCCAA 57.961 50.000 15.82 0.00 0.00 3.53
531 566 3.963665 TGCAAGACATTTTCCAAACGAG 58.036 40.909 0.00 0.00 0.00 4.18
581 618 5.639082 GCCCAAAATTTTACTCTGACCAATG 59.361 40.000 2.44 0.00 0.00 2.82
654 691 6.863126 CCATATCTTTGTGTGGTTCAAAAGAC 59.137 38.462 0.00 0.00 34.96 3.01
865 902 5.688823 CAGTTTGATATGCGTGTTGAAGAA 58.311 37.500 0.00 0.00 0.00 2.52
1179 1218 1.376466 GAAGAGGCAAGACCCAGCA 59.624 57.895 0.00 0.00 40.58 4.41
1542 1581 2.224597 TGGGTCAGTACTCGTGTAGACA 60.225 50.000 14.92 1.30 30.21 3.41
1699 1738 5.219633 GGTTTAACACGCACAAAGATCAAT 58.780 37.500 0.00 0.00 0.00 2.57
2155 2194 5.541868 TCCCCATGATGAGCAAAACTAAAAA 59.458 36.000 0.00 0.00 0.00 1.94
2156 2195 5.083122 TCCCCATGATGAGCAAAACTAAAA 58.917 37.500 0.00 0.00 0.00 1.52
2157 2196 4.671831 TCCCCATGATGAGCAAAACTAAA 58.328 39.130 0.00 0.00 0.00 1.85
2158 2197 4.314522 TCCCCATGATGAGCAAAACTAA 57.685 40.909 0.00 0.00 0.00 2.24
2159 2198 4.314522 TTCCCCATGATGAGCAAAACTA 57.685 40.909 0.00 0.00 0.00 2.24
2160 2199 2.905415 TCCCCATGATGAGCAAAACT 57.095 45.000 0.00 0.00 0.00 2.66
2161 2200 3.959535 TTTCCCCATGATGAGCAAAAC 57.040 42.857 0.00 0.00 0.00 2.43
2162 2201 4.095211 TCATTTCCCCATGATGAGCAAAA 58.905 39.130 0.00 0.00 0.00 2.44
2163 2202 3.710724 TCATTTCCCCATGATGAGCAAA 58.289 40.909 0.00 0.00 0.00 3.68
2164 2203 3.385314 TCATTTCCCCATGATGAGCAA 57.615 42.857 0.00 0.00 0.00 3.91
2165 2204 3.493334 GATCATTTCCCCATGATGAGCA 58.507 45.455 0.00 0.00 42.85 4.26
2166 2205 2.824341 GGATCATTTCCCCATGATGAGC 59.176 50.000 0.00 0.00 42.85 4.26
2167 2206 4.383931 AGGATCATTTCCCCATGATGAG 57.616 45.455 0.00 0.00 46.81 2.90
2168 2207 4.733165 GAAGGATCATTTCCCCATGATGA 58.267 43.478 0.00 0.00 46.81 2.92
2169 2208 3.504906 CGAAGGATCATTTCCCCATGATG 59.495 47.826 0.00 0.00 46.81 3.07
2170 2209 3.759581 CGAAGGATCATTTCCCCATGAT 58.240 45.455 0.00 0.00 46.81 2.45
2171 2210 3.213206 CGAAGGATCATTTCCCCATGA 57.787 47.619 0.00 0.00 46.81 3.07
2246 2317 4.159506 GTCTCCTCTTGCTTGTACAGATCT 59.840 45.833 0.00 0.00 0.00 2.75
2363 2434 0.600255 CAAACACGAAGGCCGAGACT 60.600 55.000 0.00 0.00 41.76 3.24
2663 2734 2.485903 TCGTGTTTATTCACCAACGCT 58.514 42.857 0.00 0.00 35.18 5.07
2697 2768 2.361438 ACGGTGGAATCGAATACTCCTC 59.639 50.000 2.45 2.02 0.00 3.71
2903 2975 7.771183 TGCATTTCTTTACTCTCAAACAGTTT 58.229 30.769 0.00 0.00 0.00 2.66
2944 3016 9.846248 AATAACACTTCACTGAAAAATATGAGC 57.154 29.630 0.00 0.00 0.00 4.26
2971 3043 1.040646 ACTCACTGGTCTCGAAAGCA 58.959 50.000 0.00 0.00 0.00 3.91
2994 3066 3.380142 GGCAAGATCGATCAGAGTTCTC 58.620 50.000 26.47 6.74 0.00 2.87
3078 3150 1.268743 GCACAAGCACACAAGTTCCTC 60.269 52.381 0.00 0.00 41.58 3.71
3154 3228 0.101759 TAACTACTCGCCGCATGACC 59.898 55.000 0.00 0.00 0.00 4.02
3155 3229 1.478137 CTAACTACTCGCCGCATGAC 58.522 55.000 0.00 0.00 0.00 3.06
3159 3233 2.101575 CGCTAACTACTCGCCGCA 59.898 61.111 0.00 0.00 0.00 5.69
3160 3234 2.101770 ACGCTAACTACTCGCCGC 59.898 61.111 0.00 0.00 0.00 6.53
3161 3235 1.132199 CACACGCTAACTACTCGCCG 61.132 60.000 0.00 0.00 0.00 6.46
3162 3236 0.169672 TCACACGCTAACTACTCGCC 59.830 55.000 0.00 0.00 0.00 5.54
3163 3237 1.129998 TCTCACACGCTAACTACTCGC 59.870 52.381 0.00 0.00 0.00 5.03
3164 3238 3.466712 TTCTCACACGCTAACTACTCG 57.533 47.619 0.00 0.00 0.00 4.18
3165 3239 4.617645 CAGTTTCTCACACGCTAACTACTC 59.382 45.833 0.00 0.00 0.00 2.59
3166 3240 4.547532 CAGTTTCTCACACGCTAACTACT 58.452 43.478 0.00 0.00 0.00 2.57
3167 3241 3.673809 CCAGTTTCTCACACGCTAACTAC 59.326 47.826 0.00 0.00 0.00 2.73
3168 3242 3.305813 CCCAGTTTCTCACACGCTAACTA 60.306 47.826 0.00 0.00 0.00 2.24
3169 3243 2.548067 CCCAGTTTCTCACACGCTAACT 60.548 50.000 0.00 0.00 0.00 2.24
3170 3244 1.798813 CCCAGTTTCTCACACGCTAAC 59.201 52.381 0.00 0.00 0.00 2.34
3171 3245 1.414919 ACCCAGTTTCTCACACGCTAA 59.585 47.619 0.00 0.00 0.00 3.09
3172 3246 1.045407 ACCCAGTTTCTCACACGCTA 58.955 50.000 0.00 0.00 0.00 4.26
3173 3247 0.532862 CACCCAGTTTCTCACACGCT 60.533 55.000 0.00 0.00 0.00 5.07
3174 3248 1.507141 CCACCCAGTTTCTCACACGC 61.507 60.000 0.00 0.00 0.00 5.34
3175 3249 0.105964 TCCACCCAGTTTCTCACACG 59.894 55.000 0.00 0.00 0.00 4.49
3176 3250 1.141053 ACTCCACCCAGTTTCTCACAC 59.859 52.381 0.00 0.00 0.00 3.82
3177 3251 1.507140 ACTCCACCCAGTTTCTCACA 58.493 50.000 0.00 0.00 0.00 3.58
3178 3252 2.222027 CAACTCCACCCAGTTTCTCAC 58.778 52.381 0.00 0.00 34.17 3.51
3179 3253 1.142870 CCAACTCCACCCAGTTTCTCA 59.857 52.381 0.00 0.00 34.17 3.27
3180 3254 1.545651 CCCAACTCCACCCAGTTTCTC 60.546 57.143 0.00 0.00 34.17 2.87
3181 3255 0.478507 CCCAACTCCACCCAGTTTCT 59.521 55.000 0.00 0.00 34.17 2.52
3182 3256 0.539669 CCCCAACTCCACCCAGTTTC 60.540 60.000 0.00 0.00 34.17 2.78
3183 3257 1.293683 ACCCCAACTCCACCCAGTTT 61.294 55.000 0.00 0.00 34.17 2.66
3184 3258 1.293683 AACCCCAACTCCACCCAGTT 61.294 55.000 0.00 0.00 37.05 3.16
3185 3259 0.402272 TAACCCCAACTCCACCCAGT 60.402 55.000 0.00 0.00 0.00 4.00
3186 3260 0.999712 ATAACCCCAACTCCACCCAG 59.000 55.000 0.00 0.00 0.00 4.45
3187 3261 0.701731 CATAACCCCAACTCCACCCA 59.298 55.000 0.00 0.00 0.00 4.51
3188 3262 0.702316 ACATAACCCCAACTCCACCC 59.298 55.000 0.00 0.00 0.00 4.61
3189 3263 3.009805 AGTTACATAACCCCAACTCCACC 59.990 47.826 0.00 0.00 36.88 4.61
3190 3264 4.296621 AGTTACATAACCCCAACTCCAC 57.703 45.455 0.00 0.00 36.88 4.02
3191 3265 5.327737 AAAGTTACATAACCCCAACTCCA 57.672 39.130 0.00 0.00 36.88 3.86
3192 3266 5.537295 ACAAAAGTTACATAACCCCAACTCC 59.463 40.000 0.00 0.00 36.88 3.85
3193 3267 6.644248 ACAAAAGTTACATAACCCCAACTC 57.356 37.500 0.00 0.00 36.88 3.01
3194 3268 7.014518 GGTTACAAAAGTTACATAACCCCAACT 59.985 37.037 9.47 0.00 39.15 3.16
3195 3269 7.147312 GGTTACAAAAGTTACATAACCCCAAC 58.853 38.462 9.47 0.00 39.15 3.77
3196 3270 6.016443 CGGTTACAAAAGTTACATAACCCCAA 60.016 38.462 12.89 0.00 41.09 4.12
3197 3271 5.472820 CGGTTACAAAAGTTACATAACCCCA 59.527 40.000 12.89 0.00 41.09 4.96
3198 3272 5.619757 GCGGTTACAAAAGTTACATAACCCC 60.620 44.000 12.89 4.71 41.09 4.95
3199 3273 5.393124 GCGGTTACAAAAGTTACATAACCC 58.607 41.667 12.89 6.04 41.09 4.11
3200 3274 5.048852 TGGCGGTTACAAAAGTTACATAACC 60.049 40.000 10.19 10.19 40.86 2.85
3201 3275 5.999721 TGGCGGTTACAAAAGTTACATAAC 58.000 37.500 0.00 0.00 36.46 1.89
3202 3276 6.437094 GTTGGCGGTTACAAAAGTTACATAA 58.563 36.000 0.00 0.00 0.00 1.90
3203 3277 5.333952 CGTTGGCGGTTACAAAAGTTACATA 60.334 40.000 0.00 0.00 0.00 2.29
3204 3278 4.555116 CGTTGGCGGTTACAAAAGTTACAT 60.555 41.667 0.00 0.00 0.00 2.29
3205 3279 3.242673 CGTTGGCGGTTACAAAAGTTACA 60.243 43.478 0.00 0.00 0.00 2.41
3206 3280 3.242706 ACGTTGGCGGTTACAAAAGTTAC 60.243 43.478 0.00 0.00 43.45 2.50
3207 3281 2.941720 ACGTTGGCGGTTACAAAAGTTA 59.058 40.909 0.00 0.00 43.45 2.24
3208 3282 1.744522 ACGTTGGCGGTTACAAAAGTT 59.255 42.857 0.00 0.00 43.45 2.66
3209 3283 1.064357 CACGTTGGCGGTTACAAAAGT 59.936 47.619 0.00 0.00 43.45 2.66
3210 3284 1.598430 CCACGTTGGCGGTTACAAAAG 60.598 52.381 0.00 0.00 43.45 2.27
3211 3285 0.381089 CCACGTTGGCGGTTACAAAA 59.619 50.000 0.00 0.00 43.45 2.44
3212 3286 0.463295 TCCACGTTGGCGGTTACAAA 60.463 50.000 0.00 0.00 43.45 2.83
3213 3287 0.881159 CTCCACGTTGGCGGTTACAA 60.881 55.000 0.00 0.00 43.45 2.41
3214 3288 1.301087 CTCCACGTTGGCGGTTACA 60.301 57.895 0.00 0.00 43.45 2.41
3215 3289 2.030958 CCTCCACGTTGGCGGTTAC 61.031 63.158 5.25 0.00 37.62 2.50
3216 3290 2.344500 CCTCCACGTTGGCGGTTA 59.656 61.111 5.25 0.00 37.62 2.85
3217 3291 4.636435 CCCTCCACGTTGGCGGTT 62.636 66.667 10.75 0.00 40.78 4.44
3221 3295 4.660938 AAGCCCCTCCACGTTGGC 62.661 66.667 0.00 0.00 44.35 4.52
3222 3296 2.359975 GAAGCCCCTCCACGTTGG 60.360 66.667 0.00 0.00 39.43 3.77
3223 3297 0.537371 AAAGAAGCCCCTCCACGTTG 60.537 55.000 0.00 0.00 0.00 4.10
3224 3298 0.537371 CAAAGAAGCCCCTCCACGTT 60.537 55.000 0.00 0.00 0.00 3.99
3225 3299 1.073199 CAAAGAAGCCCCTCCACGT 59.927 57.895 0.00 0.00 0.00 4.49
3226 3300 1.675641 CCAAAGAAGCCCCTCCACG 60.676 63.158 0.00 0.00 0.00 4.94
3227 3301 1.979155 GCCAAAGAAGCCCCTCCAC 60.979 63.158 0.00 0.00 0.00 4.02
3228 3302 1.729267 AAGCCAAAGAAGCCCCTCCA 61.729 55.000 0.00 0.00 0.00 3.86
3229 3303 0.967887 GAAGCCAAAGAAGCCCCTCC 60.968 60.000 0.00 0.00 0.00 4.30
3230 3304 0.038890 AGAAGCCAAAGAAGCCCCTC 59.961 55.000 0.00 0.00 0.00 4.30
3231 3305 0.484655 AAGAAGCCAAAGAAGCCCCT 59.515 50.000 0.00 0.00 0.00 4.79
3232 3306 1.342074 AAAGAAGCCAAAGAAGCCCC 58.658 50.000 0.00 0.00 0.00 5.80
3233 3307 2.289072 GGAAAAGAAGCCAAAGAAGCCC 60.289 50.000 0.00 0.00 0.00 5.19
3234 3308 2.289072 GGGAAAAGAAGCCAAAGAAGCC 60.289 50.000 0.00 0.00 0.00 4.35
3235 3309 2.365293 TGGGAAAAGAAGCCAAAGAAGC 59.635 45.455 0.00 0.00 0.00 3.86
3236 3310 4.322273 GGATGGGAAAAGAAGCCAAAGAAG 60.322 45.833 0.00 0.00 0.00 2.85
3237 3311 3.578282 GGATGGGAAAAGAAGCCAAAGAA 59.422 43.478 0.00 0.00 0.00 2.52
3238 3312 3.165071 GGATGGGAAAAGAAGCCAAAGA 58.835 45.455 0.00 0.00 0.00 2.52
3239 3313 3.168292 AGGATGGGAAAAGAAGCCAAAG 58.832 45.455 0.00 0.00 0.00 2.77
3240 3314 3.165071 GAGGATGGGAAAAGAAGCCAAA 58.835 45.455 0.00 0.00 0.00 3.28
3241 3315 2.557452 GGAGGATGGGAAAAGAAGCCAA 60.557 50.000 0.00 0.00 0.00 4.52
3242 3316 1.005924 GGAGGATGGGAAAAGAAGCCA 59.994 52.381 0.00 0.00 0.00 4.75
3243 3317 1.286257 AGGAGGATGGGAAAAGAAGCC 59.714 52.381 0.00 0.00 0.00 4.35
3244 3318 2.240921 AGAGGAGGATGGGAAAAGAAGC 59.759 50.000 0.00 0.00 0.00 3.86
3245 3319 4.582973 AAGAGGAGGATGGGAAAAGAAG 57.417 45.455 0.00 0.00 0.00 2.85
3246 3320 6.463053 TTAAAGAGGAGGATGGGAAAAGAA 57.537 37.500 0.00 0.00 0.00 2.52
3247 3321 6.658555 ATTAAAGAGGAGGATGGGAAAAGA 57.341 37.500 0.00 0.00 0.00 2.52
3248 3322 7.346471 TGTATTAAAGAGGAGGATGGGAAAAG 58.654 38.462 0.00 0.00 0.00 2.27
3249 3323 7.278724 TGTATTAAAGAGGAGGATGGGAAAA 57.721 36.000 0.00 0.00 0.00 2.29
3250 3324 6.901615 TGTATTAAAGAGGAGGATGGGAAA 57.098 37.500 0.00 0.00 0.00 3.13
3251 3325 7.794683 ACTATGTATTAAAGAGGAGGATGGGAA 59.205 37.037 0.00 0.00 0.00 3.97
3252 3326 7.313731 ACTATGTATTAAAGAGGAGGATGGGA 58.686 38.462 0.00 0.00 0.00 4.37
3253 3327 7.560796 ACTATGTATTAAAGAGGAGGATGGG 57.439 40.000 0.00 0.00 0.00 4.00
3255 3329 9.593134 GCATACTATGTATTAAAGAGGAGGATG 57.407 37.037 0.00 0.00 0.00 3.51
3256 3330 9.326489 TGCATACTATGTATTAAAGAGGAGGAT 57.674 33.333 0.00 0.00 0.00 3.24
3257 3331 8.585881 GTGCATACTATGTATTAAAGAGGAGGA 58.414 37.037 0.00 0.00 0.00 3.71
3258 3332 8.367911 TGTGCATACTATGTATTAAAGAGGAGG 58.632 37.037 0.00 0.00 0.00 4.30
3259 3333 9.197694 GTGTGCATACTATGTATTAAAGAGGAG 57.802 37.037 6.31 0.00 0.00 3.69
3260 3334 8.924303 AGTGTGCATACTATGTATTAAAGAGGA 58.076 33.333 15.19 0.00 0.00 3.71
3261 3335 9.197694 GAGTGTGCATACTATGTATTAAAGAGG 57.802 37.037 16.78 0.00 0.00 3.69
3262 3336 8.906693 CGAGTGTGCATACTATGTATTAAAGAG 58.093 37.037 16.78 0.00 0.00 2.85
3263 3337 8.410912 ACGAGTGTGCATACTATGTATTAAAGA 58.589 33.333 16.78 0.00 0.00 2.52
3264 3338 8.480066 CACGAGTGTGCATACTATGTATTAAAG 58.520 37.037 16.78 2.21 39.67 1.85
3265 3339 8.347729 CACGAGTGTGCATACTATGTATTAAA 57.652 34.615 16.78 0.00 39.67 1.52
3266 3340 7.924103 CACGAGTGTGCATACTATGTATTAA 57.076 36.000 16.78 0.00 39.67 1.40
3303 3377 4.836175 ACACCTTTGATACCGGGAATTTTT 59.164 37.500 6.32 0.00 0.00 1.94
3304 3378 4.412843 ACACCTTTGATACCGGGAATTTT 58.587 39.130 6.32 0.00 0.00 1.82
3305 3379 4.042271 ACACCTTTGATACCGGGAATTT 57.958 40.909 6.32 0.00 0.00 1.82
3306 3380 3.732048 ACACCTTTGATACCGGGAATT 57.268 42.857 6.32 0.00 0.00 2.17
3307 3381 3.732048 AACACCTTTGATACCGGGAAT 57.268 42.857 6.32 0.00 0.00 3.01
3378 3452 5.303747 TGTACAAAATATTTGTGGCCTCG 57.696 39.130 16.47 0.00 34.11 4.63
3507 3581 3.270877 GCTACACCTCACTTATTGGGTG 58.729 50.000 9.10 9.10 45.35 4.61
3509 3583 2.550978 CGCTACACCTCACTTATTGGG 58.449 52.381 0.00 0.00 0.00 4.12
3525 3599 2.372504 AGTAGTCTGATCCCTAGCGCTA 59.627 50.000 17.75 17.75 0.00 4.26
3526 3600 1.144093 AGTAGTCTGATCCCTAGCGCT 59.856 52.381 17.26 17.26 0.00 5.92
3527 3601 1.268352 CAGTAGTCTGATCCCTAGCGC 59.732 57.143 0.00 0.00 43.76 5.92
3528 3602 2.852449 TCAGTAGTCTGATCCCTAGCG 58.148 52.381 0.00 0.00 44.58 4.26
3538 3612 3.030291 AGAGCAAGGGATCAGTAGTCTG 58.970 50.000 0.00 0.00 42.54 3.51
3539 3613 3.396685 AGAGCAAGGGATCAGTAGTCT 57.603 47.619 0.00 0.00 0.00 3.24
3540 3614 5.303078 TGATAAGAGCAAGGGATCAGTAGTC 59.697 44.000 0.00 0.00 0.00 2.59
3541 3615 5.211973 TGATAAGAGCAAGGGATCAGTAGT 58.788 41.667 0.00 0.00 0.00 2.73
3542 3616 5.538053 TCTGATAAGAGCAAGGGATCAGTAG 59.462 44.000 9.36 0.00 42.63 2.57
3543 3617 5.303078 GTCTGATAAGAGCAAGGGATCAGTA 59.697 44.000 9.36 0.00 42.63 2.74
3544 3618 4.100808 GTCTGATAAGAGCAAGGGATCAGT 59.899 45.833 9.36 0.00 42.63 3.41
3545 3619 4.344679 AGTCTGATAAGAGCAAGGGATCAG 59.655 45.833 4.20 4.20 43.16 2.90
3546 3620 4.293494 AGTCTGATAAGAGCAAGGGATCA 58.707 43.478 0.00 0.00 0.00 2.92
3547 3621 4.953940 AGTCTGATAAGAGCAAGGGATC 57.046 45.455 0.00 0.00 0.00 3.36
3548 3622 5.463154 ACTAGTCTGATAAGAGCAAGGGAT 58.537 41.667 0.00 0.00 0.00 3.85
3549 3623 4.873010 ACTAGTCTGATAAGAGCAAGGGA 58.127 43.478 0.00 0.00 0.00 4.20
3550 3624 5.127845 TGAACTAGTCTGATAAGAGCAAGGG 59.872 44.000 0.00 0.00 0.00 3.95
3551 3625 6.214191 TGAACTAGTCTGATAAGAGCAAGG 57.786 41.667 0.00 0.00 0.00 3.61
3552 3626 7.487829 GTCTTGAACTAGTCTGATAAGAGCAAG 59.512 40.741 0.00 0.00 0.00 4.01
3553 3627 7.316640 GTCTTGAACTAGTCTGATAAGAGCAA 58.683 38.462 0.00 0.00 0.00 3.91
3554 3628 6.127591 GGTCTTGAACTAGTCTGATAAGAGCA 60.128 42.308 20.01 0.00 39.57 4.26
3555 3629 6.270064 GGTCTTGAACTAGTCTGATAAGAGC 58.730 44.000 14.85 14.85 35.13 4.09
3556 3630 6.094325 ACGGTCTTGAACTAGTCTGATAAGAG 59.906 42.308 0.00 0.00 0.00 2.85
3557 3631 5.944599 ACGGTCTTGAACTAGTCTGATAAGA 59.055 40.000 0.00 0.00 0.00 2.10
3558 3632 6.197364 ACGGTCTTGAACTAGTCTGATAAG 57.803 41.667 0.00 0.00 0.00 1.73
3559 3633 6.318144 CCTACGGTCTTGAACTAGTCTGATAA 59.682 42.308 0.00 0.00 0.00 1.75
3560 3634 5.821470 CCTACGGTCTTGAACTAGTCTGATA 59.179 44.000 0.00 0.00 0.00 2.15
3561 3635 4.641094 CCTACGGTCTTGAACTAGTCTGAT 59.359 45.833 0.00 0.00 0.00 2.90
3562 3636 4.008330 CCTACGGTCTTGAACTAGTCTGA 58.992 47.826 0.00 0.00 0.00 3.27
3563 3637 4.008330 TCCTACGGTCTTGAACTAGTCTG 58.992 47.826 0.00 0.00 0.00 3.51
3564 3638 4.298103 TCCTACGGTCTTGAACTAGTCT 57.702 45.455 0.00 0.00 0.00 3.24
3565 3639 6.054295 TCTATCCTACGGTCTTGAACTAGTC 58.946 44.000 0.00 0.00 0.00 2.59
3566 3640 5.999044 TCTATCCTACGGTCTTGAACTAGT 58.001 41.667 0.00 0.00 0.00 2.57
3567 3641 6.513720 GCTTCTATCCTACGGTCTTGAACTAG 60.514 46.154 0.00 0.00 0.00 2.57
3568 3642 5.298777 GCTTCTATCCTACGGTCTTGAACTA 59.701 44.000 0.00 0.00 0.00 2.24
3569 3643 4.098196 GCTTCTATCCTACGGTCTTGAACT 59.902 45.833 0.00 0.00 0.00 3.01
3570 3644 4.142227 TGCTTCTATCCTACGGTCTTGAAC 60.142 45.833 0.00 0.00 0.00 3.18
3571 3645 4.021229 TGCTTCTATCCTACGGTCTTGAA 58.979 43.478 0.00 0.00 0.00 2.69
3572 3646 3.380637 GTGCTTCTATCCTACGGTCTTGA 59.619 47.826 0.00 0.00 0.00 3.02
3573 3647 3.130516 TGTGCTTCTATCCTACGGTCTTG 59.869 47.826 0.00 0.00 0.00 3.02
3574 3648 3.362706 TGTGCTTCTATCCTACGGTCTT 58.637 45.455 0.00 0.00 0.00 3.01
3575 3649 2.952978 CTGTGCTTCTATCCTACGGTCT 59.047 50.000 0.00 0.00 0.00 3.85
3576 3650 2.688958 ACTGTGCTTCTATCCTACGGTC 59.311 50.000 0.00 0.00 0.00 4.79
3577 3651 2.736347 ACTGTGCTTCTATCCTACGGT 58.264 47.619 0.00 0.00 0.00 4.83
3578 3652 3.304794 GCTACTGTGCTTCTATCCTACGG 60.305 52.174 0.00 0.00 0.00 4.02
3579 3653 3.304794 GGCTACTGTGCTTCTATCCTACG 60.305 52.174 0.00 0.00 0.00 3.51
3580 3654 3.304794 CGGCTACTGTGCTTCTATCCTAC 60.305 52.174 0.00 0.00 0.00 3.18
3581 3655 2.885266 CGGCTACTGTGCTTCTATCCTA 59.115 50.000 0.00 0.00 0.00 2.94
3582 3656 1.683917 CGGCTACTGTGCTTCTATCCT 59.316 52.381 0.00 0.00 0.00 3.24
3583 3657 1.409427 ACGGCTACTGTGCTTCTATCC 59.591 52.381 0.00 0.00 0.00 2.59
3584 3658 2.544069 GGACGGCTACTGTGCTTCTATC 60.544 54.545 0.00 0.00 0.00 2.08
3585 3659 1.409427 GGACGGCTACTGTGCTTCTAT 59.591 52.381 0.00 0.00 0.00 1.98
3586 3660 0.815734 GGACGGCTACTGTGCTTCTA 59.184 55.000 0.00 0.00 0.00 2.10
3587 3661 1.592223 GGACGGCTACTGTGCTTCT 59.408 57.895 0.00 0.00 0.00 2.85
3588 3662 1.805945 CGGACGGCTACTGTGCTTC 60.806 63.158 0.00 0.00 0.00 3.86
3589 3663 1.605058 ATCGGACGGCTACTGTGCTT 61.605 55.000 0.00 0.00 0.00 3.91
3590 3664 2.005960 GATCGGACGGCTACTGTGCT 62.006 60.000 0.00 0.00 0.00 4.40
3591 3665 1.589196 GATCGGACGGCTACTGTGC 60.589 63.158 0.00 0.00 0.00 4.57
3592 3666 0.456221 AAGATCGGACGGCTACTGTG 59.544 55.000 0.00 0.00 0.00 3.66
3593 3667 0.739561 GAAGATCGGACGGCTACTGT 59.260 55.000 0.00 0.00 0.00 3.55
3594 3668 1.025812 AGAAGATCGGACGGCTACTG 58.974 55.000 0.00 0.00 0.00 2.74
3595 3669 2.496111 CTAGAAGATCGGACGGCTACT 58.504 52.381 0.00 0.00 0.00 2.57
3596 3670 1.069091 GCTAGAAGATCGGACGGCTAC 60.069 57.143 0.00 0.00 0.00 3.58
3597 3671 1.236628 GCTAGAAGATCGGACGGCTA 58.763 55.000 0.00 0.00 0.00 3.93
3598 3672 0.752009 TGCTAGAAGATCGGACGGCT 60.752 55.000 0.00 0.00 0.00 5.52
3599 3673 0.315568 ATGCTAGAAGATCGGACGGC 59.684 55.000 0.00 0.00 0.00 5.68
3600 3674 1.336332 CCATGCTAGAAGATCGGACGG 60.336 57.143 0.00 0.00 0.00 4.79
3601 3675 1.932604 GCCATGCTAGAAGATCGGACG 60.933 57.143 0.00 0.00 0.00 4.79
3602 3676 1.606737 GGCCATGCTAGAAGATCGGAC 60.607 57.143 0.00 0.00 0.00 4.79
3603 3677 0.681733 GGCCATGCTAGAAGATCGGA 59.318 55.000 0.00 0.00 0.00 4.55
3604 3678 0.321122 GGGCCATGCTAGAAGATCGG 60.321 60.000 4.39 0.00 0.00 4.18
3605 3679 0.668706 CGGGCCATGCTAGAAGATCG 60.669 60.000 4.39 0.00 0.00 3.69
3606 3680 0.952984 GCGGGCCATGCTAGAAGATC 60.953 60.000 4.39 0.00 0.00 2.75
3607 3681 1.072159 GCGGGCCATGCTAGAAGAT 59.928 57.895 4.39 0.00 0.00 2.40
3608 3682 2.366393 TGCGGGCCATGCTAGAAGA 61.366 57.895 18.68 0.00 0.00 2.87
3609 3683 2.182842 GTGCGGGCCATGCTAGAAG 61.183 63.158 18.68 0.00 0.00 2.85
3610 3684 2.124736 GTGCGGGCCATGCTAGAA 60.125 61.111 18.68 0.00 0.00 2.10
3611 3685 2.745308 ATGTGCGGGCCATGCTAGA 61.745 57.895 18.68 6.00 0.00 2.43
3612 3686 2.203252 ATGTGCGGGCCATGCTAG 60.203 61.111 18.68 0.00 0.00 3.42
3613 3687 2.342073 ATCATGTGCGGGCCATGCTA 62.342 55.000 18.68 9.37 39.60 3.49
3614 3688 3.726558 ATCATGTGCGGGCCATGCT 62.727 57.895 18.68 0.00 39.60 3.79
3615 3689 2.300850 AAATCATGTGCGGGCCATGC 62.301 55.000 4.39 8.98 39.60 4.06
3616 3690 0.528901 CAAATCATGTGCGGGCCATG 60.529 55.000 4.39 12.84 40.82 3.66
3617 3691 1.817881 CAAATCATGTGCGGGCCAT 59.182 52.632 4.39 0.00 0.00 4.40
3618 3692 3.004326 GCAAATCATGTGCGGGCCA 62.004 57.895 4.39 0.00 31.20 5.36
3619 3693 2.202783 GCAAATCATGTGCGGGCC 60.203 61.111 0.00 0.00 31.20 5.80
3620 3694 1.517694 CAGCAAATCATGTGCGGGC 60.518 57.895 0.00 0.00 46.86 6.13
3621 3695 0.527113 TTCAGCAAATCATGTGCGGG 59.473 50.000 0.00 0.00 46.86 6.13
3622 3696 2.572191 ATTCAGCAAATCATGTGCGG 57.428 45.000 0.00 0.00 46.86 5.69
3623 3697 3.503891 TCAATTCAGCAAATCATGTGCG 58.496 40.909 0.00 0.00 46.86 5.34
3624 3698 5.276207 CGAATCAATTCAGCAAATCATGTGC 60.276 40.000 0.00 0.00 42.55 4.57
3625 3699 5.803461 ACGAATCAATTCAGCAAATCATGTG 59.197 36.000 3.81 0.00 36.61 3.21
3626 3700 5.957798 ACGAATCAATTCAGCAAATCATGT 58.042 33.333 3.81 0.00 36.61 3.21
3627 3701 6.309494 ACAACGAATCAATTCAGCAAATCATG 59.691 34.615 3.81 0.00 36.61 3.07
3628 3702 6.392354 ACAACGAATCAATTCAGCAAATCAT 58.608 32.000 3.81 0.00 36.61 2.45
3629 3703 5.771469 ACAACGAATCAATTCAGCAAATCA 58.229 33.333 3.81 0.00 36.61 2.57
3630 3704 7.538678 ACTTACAACGAATCAATTCAGCAAATC 59.461 33.333 3.81 0.00 36.61 2.17
3631 3705 7.326789 CACTTACAACGAATCAATTCAGCAAAT 59.673 33.333 3.81 0.00 36.61 2.32
3632 3706 6.636447 CACTTACAACGAATCAATTCAGCAAA 59.364 34.615 3.81 0.00 36.61 3.68
3633 3707 6.017523 TCACTTACAACGAATCAATTCAGCAA 60.018 34.615 3.81 0.00 36.61 3.91
3634 3708 5.468409 TCACTTACAACGAATCAATTCAGCA 59.532 36.000 3.81 0.00 36.61 4.41
3635 3709 5.927030 TCACTTACAACGAATCAATTCAGC 58.073 37.500 3.81 0.00 36.61 4.26
3636 3710 7.007725 GCAATCACTTACAACGAATCAATTCAG 59.992 37.037 3.81 0.00 36.61 3.02
3637 3711 6.801377 GCAATCACTTACAACGAATCAATTCA 59.199 34.615 3.81 0.00 36.61 2.57
3638 3712 7.023575 AGCAATCACTTACAACGAATCAATTC 58.976 34.615 0.00 0.00 0.00 2.17
3639 3713 6.913170 AGCAATCACTTACAACGAATCAATT 58.087 32.000 0.00 0.00 0.00 2.32
3640 3714 6.500684 AGCAATCACTTACAACGAATCAAT 57.499 33.333 0.00 0.00 0.00 2.57
3641 3715 5.940192 AGCAATCACTTACAACGAATCAA 57.060 34.783 0.00 0.00 0.00 2.57
3642 3716 5.106712 GGAAGCAATCACTTACAACGAATCA 60.107 40.000 0.00 0.00 30.24 2.57
3643 3717 5.122396 AGGAAGCAATCACTTACAACGAATC 59.878 40.000 0.00 0.00 32.46 2.52
3644 3718 5.003804 AGGAAGCAATCACTTACAACGAAT 58.996 37.500 0.00 0.00 32.46 3.34
3645 3719 4.213270 CAGGAAGCAATCACTTACAACGAA 59.787 41.667 0.00 0.00 32.46 3.85
3646 3720 3.745975 CAGGAAGCAATCACTTACAACGA 59.254 43.478 0.00 0.00 32.46 3.85
3647 3721 3.498397 ACAGGAAGCAATCACTTACAACG 59.502 43.478 0.00 0.00 32.46 4.10
3648 3722 6.204882 AGTTACAGGAAGCAATCACTTACAAC 59.795 38.462 0.00 0.00 32.46 3.32
3649 3723 6.204688 CAGTTACAGGAAGCAATCACTTACAA 59.795 38.462 0.00 0.00 32.46 2.41
3650 3724 5.700832 CAGTTACAGGAAGCAATCACTTACA 59.299 40.000 0.00 0.00 32.46 2.41
3651 3725 5.390991 GCAGTTACAGGAAGCAATCACTTAC 60.391 44.000 0.00 0.00 0.00 2.34
3652 3726 4.695455 GCAGTTACAGGAAGCAATCACTTA 59.305 41.667 0.00 0.00 0.00 2.24
3653 3727 3.503748 GCAGTTACAGGAAGCAATCACTT 59.496 43.478 0.00 0.00 0.00 3.16
3654 3728 3.077359 GCAGTTACAGGAAGCAATCACT 58.923 45.455 0.00 0.00 0.00 3.41
3655 3729 3.077359 AGCAGTTACAGGAAGCAATCAC 58.923 45.455 0.00 0.00 0.00 3.06
3656 3730 3.423539 AGCAGTTACAGGAAGCAATCA 57.576 42.857 0.00 0.00 0.00 2.57
3657 3731 3.127721 GGAAGCAGTTACAGGAAGCAATC 59.872 47.826 0.00 0.00 0.00 2.67
3658 3732 3.084786 GGAAGCAGTTACAGGAAGCAAT 58.915 45.455 0.00 0.00 0.00 3.56
3659 3733 2.158682 TGGAAGCAGTTACAGGAAGCAA 60.159 45.455 0.00 0.00 0.00 3.91
3660 3734 1.419762 TGGAAGCAGTTACAGGAAGCA 59.580 47.619 0.00 0.00 0.00 3.91
3661 3735 1.807142 GTGGAAGCAGTTACAGGAAGC 59.193 52.381 0.00 0.00 0.00 3.86
3662 3736 3.409026 AGTGGAAGCAGTTACAGGAAG 57.591 47.619 0.00 0.00 0.00 3.46
3663 3737 4.967084 TTAGTGGAAGCAGTTACAGGAA 57.033 40.909 0.00 0.00 0.00 3.36
3664 3738 4.101898 TGTTTAGTGGAAGCAGTTACAGGA 59.898 41.667 0.00 0.00 0.00 3.86
3665 3739 4.213482 GTGTTTAGTGGAAGCAGTTACAGG 59.787 45.833 0.00 0.00 0.00 4.00
3666 3740 4.084537 CGTGTTTAGTGGAAGCAGTTACAG 60.085 45.833 0.00 0.00 0.00 2.74
3667 3741 3.805422 CGTGTTTAGTGGAAGCAGTTACA 59.195 43.478 0.00 0.00 0.00 2.41
3668 3742 3.363673 GCGTGTTTAGTGGAAGCAGTTAC 60.364 47.826 0.00 0.00 0.00 2.50
3669 3743 2.803956 GCGTGTTTAGTGGAAGCAGTTA 59.196 45.455 0.00 0.00 0.00 2.24
3670 3744 1.602377 GCGTGTTTAGTGGAAGCAGTT 59.398 47.619 0.00 0.00 0.00 3.16
3671 3745 1.226746 GCGTGTTTAGTGGAAGCAGT 58.773 50.000 0.00 0.00 0.00 4.40
3672 3746 0.517316 GGCGTGTTTAGTGGAAGCAG 59.483 55.000 0.00 0.00 0.00 4.24
3673 3747 1.225376 CGGCGTGTTTAGTGGAAGCA 61.225 55.000 0.00 0.00 0.00 3.91
3674 3748 1.495951 CGGCGTGTTTAGTGGAAGC 59.504 57.895 0.00 0.00 0.00 3.86
3675 3749 1.908066 GCCGGCGTGTTTAGTGGAAG 61.908 60.000 12.58 0.00 0.00 3.46
3676 3750 1.962306 GCCGGCGTGTTTAGTGGAA 60.962 57.895 12.58 0.00 0.00 3.53
3677 3751 1.534336 TAGCCGGCGTGTTTAGTGGA 61.534 55.000 23.20 0.00 0.00 4.02
3678 3752 1.079681 TAGCCGGCGTGTTTAGTGG 60.080 57.895 23.20 0.00 0.00 4.00
3679 3753 0.668096 TGTAGCCGGCGTGTTTAGTG 60.668 55.000 23.20 0.00 0.00 2.74
3680 3754 0.248289 ATGTAGCCGGCGTGTTTAGT 59.752 50.000 23.20 2.71 0.00 2.24
3681 3755 1.326548 GAATGTAGCCGGCGTGTTTAG 59.673 52.381 23.20 0.00 0.00 1.85
3682 3756 1.361793 GAATGTAGCCGGCGTGTTTA 58.638 50.000 23.20 4.16 0.00 2.01
3683 3757 1.632046 CGAATGTAGCCGGCGTGTTT 61.632 55.000 23.20 14.08 0.00 2.83
3684 3758 2.098233 CGAATGTAGCCGGCGTGTT 61.098 57.895 23.20 14.80 0.00 3.32
3685 3759 2.508439 CGAATGTAGCCGGCGTGT 60.508 61.111 23.20 6.30 0.00 4.49
3686 3760 3.925238 GCGAATGTAGCCGGCGTG 61.925 66.667 23.20 7.96 0.00 5.34
3693 3767 0.462759 AAGGAGCTGGCGAATGTAGC 60.463 55.000 0.00 0.00 37.71 3.58
3694 3768 1.576356 GAAGGAGCTGGCGAATGTAG 58.424 55.000 0.00 0.00 0.00 2.74
3695 3769 0.178068 GGAAGGAGCTGGCGAATGTA 59.822 55.000 0.00 0.00 0.00 2.29
3696 3770 1.078143 GGAAGGAGCTGGCGAATGT 60.078 57.895 0.00 0.00 0.00 2.71
3697 3771 0.393537 AAGGAAGGAGCTGGCGAATG 60.394 55.000 0.00 0.00 0.00 2.67
3698 3772 0.329596 AAAGGAAGGAGCTGGCGAAT 59.670 50.000 0.00 0.00 0.00 3.34
3699 3773 0.606401 CAAAGGAAGGAGCTGGCGAA 60.606 55.000 0.00 0.00 0.00 4.70
3700 3774 1.003355 CAAAGGAAGGAGCTGGCGA 60.003 57.895 0.00 0.00 0.00 5.54
3701 3775 2.694760 GCAAAGGAAGGAGCTGGCG 61.695 63.158 0.00 0.00 0.00 5.69
3702 3776 0.897401 AAGCAAAGGAAGGAGCTGGC 60.897 55.000 0.00 0.00 37.41 4.85
3703 3777 1.172175 GAAGCAAAGGAAGGAGCTGG 58.828 55.000 0.00 0.00 37.41 4.85
3704 3778 1.172175 GGAAGCAAAGGAAGGAGCTG 58.828 55.000 0.00 0.00 37.41 4.24
3705 3779 1.004161 GAGGAAGCAAAGGAAGGAGCT 59.996 52.381 0.00 0.00 39.37 4.09
3706 3780 1.458398 GAGGAAGCAAAGGAAGGAGC 58.542 55.000 0.00 0.00 0.00 4.70
3707 3781 1.632920 AGGAGGAAGCAAAGGAAGGAG 59.367 52.381 0.00 0.00 0.00 3.69
3708 3782 1.747444 AGGAGGAAGCAAAGGAAGGA 58.253 50.000 0.00 0.00 0.00 3.36
3709 3783 2.573915 ACTAGGAGGAAGCAAAGGAAGG 59.426 50.000 0.00 0.00 0.00 3.46
3710 3784 3.990959 ACTAGGAGGAAGCAAAGGAAG 57.009 47.619 0.00 0.00 0.00 3.46
3711 3785 6.012858 TCAATTACTAGGAGGAAGCAAAGGAA 60.013 38.462 0.00 0.00 0.00 3.36
3712 3786 5.487488 TCAATTACTAGGAGGAAGCAAAGGA 59.513 40.000 0.00 0.00 0.00 3.36
3713 3787 5.586643 GTCAATTACTAGGAGGAAGCAAAGG 59.413 44.000 0.00 0.00 0.00 3.11
3714 3788 6.314896 CAGTCAATTACTAGGAGGAAGCAAAG 59.685 42.308 0.00 0.00 35.76 2.77
3715 3789 6.173339 CAGTCAATTACTAGGAGGAAGCAAA 58.827 40.000 0.00 0.00 35.76 3.68
3716 3790 5.734720 CAGTCAATTACTAGGAGGAAGCAA 58.265 41.667 0.00 0.00 35.76 3.91
3717 3791 4.383118 GCAGTCAATTACTAGGAGGAAGCA 60.383 45.833 0.00 0.00 35.76 3.91
3718 3792 4.123506 GCAGTCAATTACTAGGAGGAAGC 58.876 47.826 0.00 0.00 35.76 3.86
3719 3793 5.606348 AGCAGTCAATTACTAGGAGGAAG 57.394 43.478 0.00 0.00 35.76 3.46
3720 3794 5.104900 GGAAGCAGTCAATTACTAGGAGGAA 60.105 44.000 0.00 0.00 35.76 3.36
3721 3795 4.406003 GGAAGCAGTCAATTACTAGGAGGA 59.594 45.833 0.00 0.00 35.76 3.71
3722 3796 4.443598 GGGAAGCAGTCAATTACTAGGAGG 60.444 50.000 0.00 0.00 35.76 4.30
3723 3797 4.162320 TGGGAAGCAGTCAATTACTAGGAG 59.838 45.833 0.00 0.00 35.76 3.69
3724 3798 4.101114 TGGGAAGCAGTCAATTACTAGGA 58.899 43.478 0.00 0.00 35.76 2.94
3725 3799 4.487714 TGGGAAGCAGTCAATTACTAGG 57.512 45.455 0.00 0.00 35.76 3.02
3726 3800 8.682936 ATTTATGGGAAGCAGTCAATTACTAG 57.317 34.615 0.00 0.00 35.76 2.57
3727 3801 8.271458 TGATTTATGGGAAGCAGTCAATTACTA 58.729 33.333 0.00 0.00 35.76 1.82
3728 3802 7.067494 GTGATTTATGGGAAGCAGTCAATTACT 59.933 37.037 0.00 0.00 39.81 2.24
3729 3803 7.196331 GTGATTTATGGGAAGCAGTCAATTAC 58.804 38.462 0.00 0.00 0.00 1.89
3730 3804 6.038161 CGTGATTTATGGGAAGCAGTCAATTA 59.962 38.462 0.00 0.00 0.00 1.40
3731 3805 5.163622 CGTGATTTATGGGAAGCAGTCAATT 60.164 40.000 0.00 0.00 0.00 2.32
3732 3806 4.336433 CGTGATTTATGGGAAGCAGTCAAT 59.664 41.667 0.00 0.00 0.00 2.57
3733 3807 3.689161 CGTGATTTATGGGAAGCAGTCAA 59.311 43.478 0.00 0.00 0.00 3.18
3734 3808 3.270027 CGTGATTTATGGGAAGCAGTCA 58.730 45.455 0.00 0.00 0.00 3.41
3735 3809 2.032178 GCGTGATTTATGGGAAGCAGTC 59.968 50.000 0.00 0.00 0.00 3.51
3736 3810 2.017049 GCGTGATTTATGGGAAGCAGT 58.983 47.619 0.00 0.00 0.00 4.40
3737 3811 2.292267 AGCGTGATTTATGGGAAGCAG 58.708 47.619 0.00 0.00 0.00 4.24
3738 3812 2.418368 AGCGTGATTTATGGGAAGCA 57.582 45.000 0.00 0.00 0.00 3.91
3739 3813 3.467803 AGTAGCGTGATTTATGGGAAGC 58.532 45.455 0.00 0.00 0.00 3.86
3740 3814 7.441157 TCAATTAGTAGCGTGATTTATGGGAAG 59.559 37.037 0.00 0.00 0.00 3.46
3741 3815 7.225931 GTCAATTAGTAGCGTGATTTATGGGAA 59.774 37.037 0.00 0.00 0.00 3.97
3742 3816 6.704493 GTCAATTAGTAGCGTGATTTATGGGA 59.296 38.462 0.00 0.00 0.00 4.37
3743 3817 6.706270 AGTCAATTAGTAGCGTGATTTATGGG 59.294 38.462 0.00 0.00 0.00 4.00
3744 3818 7.567571 CAGTCAATTAGTAGCGTGATTTATGG 58.432 38.462 0.00 0.00 0.00 2.74
3745 3819 7.042456 AGCAGTCAATTAGTAGCGTGATTTATG 60.042 37.037 0.00 0.00 0.00 1.90
3746 3820 6.986817 AGCAGTCAATTAGTAGCGTGATTTAT 59.013 34.615 0.00 0.00 0.00 1.40
3747 3821 6.338146 AGCAGTCAATTAGTAGCGTGATTTA 58.662 36.000 0.00 0.00 0.00 1.40
3748 3822 5.178797 AGCAGTCAATTAGTAGCGTGATTT 58.821 37.500 0.00 0.00 0.00 2.17
3749 3823 4.759782 AGCAGTCAATTAGTAGCGTGATT 58.240 39.130 0.00 0.00 0.00 2.57
3750 3824 4.392921 AGCAGTCAATTAGTAGCGTGAT 57.607 40.909 0.00 0.00 0.00 3.06
3751 3825 3.868757 AGCAGTCAATTAGTAGCGTGA 57.131 42.857 0.00 0.00 0.00 4.35
3752 3826 3.307242 GGAAGCAGTCAATTAGTAGCGTG 59.693 47.826 0.00 0.00 0.00 5.34
3753 3827 3.195825 AGGAAGCAGTCAATTAGTAGCGT 59.804 43.478 0.00 0.00 0.00 5.07
3754 3828 3.553511 CAGGAAGCAGTCAATTAGTAGCG 59.446 47.826 0.00 0.00 0.00 4.26
3755 3829 4.508662 ACAGGAAGCAGTCAATTAGTAGC 58.491 43.478 0.00 0.00 0.00 3.58
3756 3830 7.097192 TGTTACAGGAAGCAGTCAATTAGTAG 58.903 38.462 0.00 0.00 0.00 2.57
3757 3831 6.999950 TGTTACAGGAAGCAGTCAATTAGTA 58.000 36.000 0.00 0.00 0.00 1.82
3758 3832 5.865085 TGTTACAGGAAGCAGTCAATTAGT 58.135 37.500 0.00 0.00 0.00 2.24
3759 3833 6.428159 AGTTGTTACAGGAAGCAGTCAATTAG 59.572 38.462 0.00 0.00 0.00 1.73
3760 3834 6.204688 CAGTTGTTACAGGAAGCAGTCAATTA 59.795 38.462 0.00 0.00 0.00 1.40
3761 3835 5.009010 CAGTTGTTACAGGAAGCAGTCAATT 59.991 40.000 0.00 0.00 0.00 2.32
3762 3836 4.516698 CAGTTGTTACAGGAAGCAGTCAAT 59.483 41.667 0.00 0.00 0.00 2.57
3763 3837 3.876914 CAGTTGTTACAGGAAGCAGTCAA 59.123 43.478 0.00 0.00 0.00 3.18
3764 3838 3.466836 CAGTTGTTACAGGAAGCAGTCA 58.533 45.455 0.00 0.00 0.00 3.41
3765 3839 2.224314 GCAGTTGTTACAGGAAGCAGTC 59.776 50.000 0.00 0.00 0.00 3.51
3766 3840 2.222027 GCAGTTGTTACAGGAAGCAGT 58.778 47.619 0.00 0.00 0.00 4.40
3767 3841 2.221169 TGCAGTTGTTACAGGAAGCAG 58.779 47.619 0.00 0.00 0.00 4.24
3768 3842 2.340210 TGCAGTTGTTACAGGAAGCA 57.660 45.000 0.00 0.00 0.00 3.91
3769 3843 2.159653 CGATGCAGTTGTTACAGGAAGC 60.160 50.000 0.00 0.00 0.00 3.86
3770 3844 2.416547 CCGATGCAGTTGTTACAGGAAG 59.583 50.000 0.00 0.00 0.00 3.46
3771 3845 2.037902 TCCGATGCAGTTGTTACAGGAA 59.962 45.455 0.00 0.00 0.00 3.36
3772 3846 1.621317 TCCGATGCAGTTGTTACAGGA 59.379 47.619 0.00 0.00 0.00 3.86
3773 3847 2.093306 TCCGATGCAGTTGTTACAGG 57.907 50.000 0.00 0.00 0.00 4.00
3774 3848 4.651994 GAATTCCGATGCAGTTGTTACAG 58.348 43.478 0.00 0.00 0.00 2.74
3775 3849 3.124466 CGAATTCCGATGCAGTTGTTACA 59.876 43.478 0.00 0.00 41.76 2.41
3776 3850 3.485216 CCGAATTCCGATGCAGTTGTTAC 60.485 47.826 0.00 0.00 41.76 2.50
3777 3851 2.675844 CCGAATTCCGATGCAGTTGTTA 59.324 45.455 0.00 0.00 41.76 2.41
3778 3852 1.468520 CCGAATTCCGATGCAGTTGTT 59.531 47.619 0.00 0.00 41.76 2.83
3779 3853 1.086696 CCGAATTCCGATGCAGTTGT 58.913 50.000 0.00 0.00 41.76 3.32
3780 3854 0.248215 GCCGAATTCCGATGCAGTTG 60.248 55.000 0.00 0.00 41.76 3.16
3781 3855 0.392998 AGCCGAATTCCGATGCAGTT 60.393 50.000 0.00 0.00 41.76 3.16
3782 3856 0.464036 TAGCCGAATTCCGATGCAGT 59.536 50.000 0.00 0.00 41.76 4.40
3783 3857 1.143305 CTAGCCGAATTCCGATGCAG 58.857 55.000 0.00 0.00 41.76 4.41
3784 3858 0.464036 ACTAGCCGAATTCCGATGCA 59.536 50.000 0.00 0.00 41.76 3.96
3785 3859 1.583054 AACTAGCCGAATTCCGATGC 58.417 50.000 0.00 0.00 41.76 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.