Multiple sequence alignment - TraesCS3B01G264300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G264300 chr3B 100.000 3059 0 0 1 3059 423366196 423363138 0.000000e+00 5650.0
1 TraesCS3B01G264300 chr3D 96.447 1182 34 2 936 2109 325977807 325976626 0.000000e+00 1943.0
2 TraesCS3B01G264300 chr3D 91.138 835 35 12 2226 3059 325974396 325973600 0.000000e+00 1096.0
3 TraesCS3B01G264300 chr3D 84.615 416 40 8 509 916 325978193 325977794 2.860000e-105 392.0
4 TraesCS3B01G264300 chr3D 89.677 155 10 4 2086 2234 325976615 325976461 3.110000e-45 193.0
5 TraesCS3B01G264300 chr3A 95.920 1201 44 2 932 2127 439289930 439291130 0.000000e+00 1941.0
6 TraesCS3B01G264300 chr3A 93.172 454 28 2 2260 2713 439291194 439291644 0.000000e+00 664.0
7 TraesCS3B01G264300 chr3A 93.910 312 15 2 2749 3059 439291973 439292281 4.620000e-128 468.0
8 TraesCS3B01G264300 chr3A 86.919 344 27 5 555 895 439289593 439289921 1.340000e-98 370.0
9 TraesCS3B01G264300 chr3A 97.143 70 2 0 2158 2227 439291130 439291199 5.360000e-23 119.0
10 TraesCS3B01G264300 chr4D 84.440 482 65 10 3 479 374159825 374159349 1.660000e-127 466.0
11 TraesCS3B01G264300 chr4D 83.711 485 68 11 1 479 374154262 374153783 6.020000e-122 448.0
12 TraesCS3B01G264300 chr2B 84.746 472 63 9 12 480 655723235 655723700 5.970000e-127 464.0
13 TraesCS3B01G264300 chr2B 79.391 427 73 8 2345 2760 383644457 383644035 1.390000e-73 287.0
14 TraesCS3B01G264300 chr2D 84.681 470 65 7 12 478 222795863 222795398 2.150000e-126 462.0
15 TraesCS3B01G264300 chr2D 75.758 495 95 10 2345 2826 315981831 315981349 3.070000e-55 226.0
16 TraesCS3B01G264300 chr6D 84.501 471 66 7 12 479 108197588 108197122 2.780000e-125 459.0
17 TraesCS3B01G264300 chr6D 83.507 479 72 7 2 477 465242911 465243385 1.010000e-119 440.0
18 TraesCS3B01G264300 chr7A 84.289 471 67 6 12 479 349019567 349020033 1.290000e-123 453.0
19 TraesCS3B01G264300 chr4A 84.322 472 65 9 12 479 572247659 572248125 1.290000e-123 453.0
20 TraesCS3B01G264300 chr7B 84.076 471 69 6 12 479 226154088 226153621 1.670000e-122 449.0
21 TraesCS3B01G264300 chr5B 81.439 264 43 3 2345 2606 214260587 214260328 8.590000e-51 211.0
22 TraesCS3B01G264300 chr5D 75.298 336 68 13 2320 2650 446684436 446684761 2.460000e-31 147.0
23 TraesCS3B01G264300 chr5D 83.562 73 11 1 2572 2644 446743308 446743379 1.970000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G264300 chr3B 423363138 423366196 3058 True 5650.0 5650 100.00000 1 3059 1 chr3B.!!$R1 3058
1 TraesCS3B01G264300 chr3D 325973600 325978193 4593 True 906.0 1943 90.46925 509 3059 4 chr3D.!!$R1 2550
2 TraesCS3B01G264300 chr3A 439289593 439292281 2688 False 712.4 1941 93.41280 555 3059 5 chr3A.!!$F1 2504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.030235 GTGGTTTGCTTTCGTCCCAC 59.970 55.0 0.00 0.0 35.99 4.61 F
50 51 0.034337 TCCCACTGAGTTAACGTGCC 59.966 55.0 0.00 0.0 0.00 5.01 F
51 52 0.034896 CCCACTGAGTTAACGTGCCT 59.965 55.0 0.00 0.0 0.00 4.75 F
124 125 0.036671 GGTCGGTCCGAAATGGTTCT 60.037 55.0 17.32 0.0 37.72 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1344 1364 0.254178 CAGAATGGCTGGTAGGCTGT 59.746 55.000 0.00 0.00 41.96 4.40 R
1958 1978 1.854743 CCTGAATCATACGCACGTCTG 59.145 52.381 0.00 0.00 0.00 3.51 R
1997 2017 2.435410 CGACGGCCCTAACCAACC 60.435 66.667 0.00 0.00 0.00 3.77 R
2074 2097 3.557595 CCGAAATATCCTGACAGCTGAAC 59.442 47.826 23.35 14.31 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.317230 CCGAGTGGTTTGCTTTCGT 58.683 52.632 0.00 0.00 0.00 3.85
32 33 0.234884 CCGAGTGGTTTGCTTTCGTC 59.765 55.000 0.00 0.00 0.00 4.20
33 34 0.234884 CGAGTGGTTTGCTTTCGTCC 59.765 55.000 0.00 0.00 0.00 4.79
34 35 0.591659 GAGTGGTTTGCTTTCGTCCC 59.408 55.000 0.00 0.00 0.00 4.46
35 36 0.106918 AGTGGTTTGCTTTCGTCCCA 60.107 50.000 0.00 0.00 0.00 4.37
36 37 0.030235 GTGGTTTGCTTTCGTCCCAC 59.970 55.000 0.00 0.00 35.99 4.61
37 38 0.106918 TGGTTTGCTTTCGTCCCACT 60.107 50.000 0.00 0.00 0.00 4.00
38 39 0.310854 GGTTTGCTTTCGTCCCACTG 59.689 55.000 0.00 0.00 0.00 3.66
39 40 1.305201 GTTTGCTTTCGTCCCACTGA 58.695 50.000 0.00 0.00 0.00 3.41
40 41 1.264288 GTTTGCTTTCGTCCCACTGAG 59.736 52.381 0.00 0.00 0.00 3.35
41 42 0.468226 TTGCTTTCGTCCCACTGAGT 59.532 50.000 0.00 0.00 0.00 3.41
42 43 0.468226 TGCTTTCGTCCCACTGAGTT 59.532 50.000 0.00 0.00 0.00 3.01
43 44 1.689813 TGCTTTCGTCCCACTGAGTTA 59.310 47.619 0.00 0.00 0.00 2.24
44 45 2.103432 TGCTTTCGTCCCACTGAGTTAA 59.897 45.455 0.00 0.00 0.00 2.01
45 46 2.479275 GCTTTCGTCCCACTGAGTTAAC 59.521 50.000 0.00 0.00 0.00 2.01
46 47 2.427232 TTCGTCCCACTGAGTTAACG 57.573 50.000 0.00 5.18 0.00 3.18
47 48 1.321474 TCGTCCCACTGAGTTAACGT 58.679 50.000 9.89 0.00 0.00 3.99
48 49 1.001048 TCGTCCCACTGAGTTAACGTG 60.001 52.381 9.89 2.71 0.00 4.49
49 50 1.145803 GTCCCACTGAGTTAACGTGC 58.854 55.000 0.00 0.00 0.00 5.34
50 51 0.034337 TCCCACTGAGTTAACGTGCC 59.966 55.000 0.00 0.00 0.00 5.01
51 52 0.034896 CCCACTGAGTTAACGTGCCT 59.965 55.000 0.00 0.00 0.00 4.75
52 53 1.148310 CCACTGAGTTAACGTGCCTG 58.852 55.000 0.00 0.00 0.00 4.85
53 54 1.270094 CCACTGAGTTAACGTGCCTGA 60.270 52.381 0.00 0.00 0.00 3.86
54 55 1.792949 CACTGAGTTAACGTGCCTGAC 59.207 52.381 0.00 0.00 0.00 3.51
55 56 1.270147 ACTGAGTTAACGTGCCTGACC 60.270 52.381 0.00 0.00 0.00 4.02
56 57 1.000955 CTGAGTTAACGTGCCTGACCT 59.999 52.381 0.00 0.00 0.00 3.85
57 58 1.414919 TGAGTTAACGTGCCTGACCTT 59.585 47.619 0.00 0.00 0.00 3.50
58 59 2.067013 GAGTTAACGTGCCTGACCTTC 58.933 52.381 0.00 0.00 0.00 3.46
59 60 1.692519 AGTTAACGTGCCTGACCTTCT 59.307 47.619 0.00 0.00 0.00 2.85
60 61 2.895404 AGTTAACGTGCCTGACCTTCTA 59.105 45.455 0.00 0.00 0.00 2.10
61 62 3.514309 AGTTAACGTGCCTGACCTTCTAT 59.486 43.478 0.00 0.00 0.00 1.98
62 63 4.708421 AGTTAACGTGCCTGACCTTCTATA 59.292 41.667 0.00 0.00 0.00 1.31
63 64 5.186409 AGTTAACGTGCCTGACCTTCTATAA 59.814 40.000 0.00 0.00 0.00 0.98
64 65 4.755266 AACGTGCCTGACCTTCTATAAT 57.245 40.909 0.00 0.00 0.00 1.28
65 66 4.323553 ACGTGCCTGACCTTCTATAATC 57.676 45.455 0.00 0.00 0.00 1.75
66 67 3.961408 ACGTGCCTGACCTTCTATAATCT 59.039 43.478 0.00 0.00 0.00 2.40
67 68 4.406003 ACGTGCCTGACCTTCTATAATCTT 59.594 41.667 0.00 0.00 0.00 2.40
68 69 4.985409 CGTGCCTGACCTTCTATAATCTTC 59.015 45.833 0.00 0.00 0.00 2.87
69 70 5.221342 CGTGCCTGACCTTCTATAATCTTCT 60.221 44.000 0.00 0.00 0.00 2.85
70 71 6.016192 CGTGCCTGACCTTCTATAATCTTCTA 60.016 42.308 0.00 0.00 0.00 2.10
71 72 7.309499 CGTGCCTGACCTTCTATAATCTTCTAT 60.309 40.741 0.00 0.00 0.00 1.98
72 73 9.026121 GTGCCTGACCTTCTATAATCTTCTATA 57.974 37.037 0.00 0.00 0.00 1.31
73 74 9.775539 TGCCTGACCTTCTATAATCTTCTATAT 57.224 33.333 0.00 0.00 0.00 0.86
89 90 8.466617 TCTTCTATATCTAACTTGGTCTCACC 57.533 38.462 0.00 0.00 39.22 4.02
90 91 6.879276 TCTATATCTAACTTGGTCTCACCG 57.121 41.667 0.00 0.00 42.58 4.94
91 92 6.598503 TCTATATCTAACTTGGTCTCACCGA 58.401 40.000 0.00 0.00 42.58 4.69
97 98 2.526304 CTTGGTCTCACCGAGTCAAA 57.474 50.000 2.07 0.00 43.45 2.69
98 99 3.045601 CTTGGTCTCACCGAGTCAAAT 57.954 47.619 2.07 0.00 43.45 2.32
99 100 2.743636 TGGTCTCACCGAGTCAAATC 57.256 50.000 0.00 0.00 42.58 2.17
100 101 1.967779 TGGTCTCACCGAGTCAAATCA 59.032 47.619 0.00 0.00 42.58 2.57
101 102 2.367241 TGGTCTCACCGAGTCAAATCAA 59.633 45.455 0.00 0.00 42.58 2.57
102 103 2.737252 GGTCTCACCGAGTCAAATCAAC 59.263 50.000 0.00 0.00 0.00 3.18
103 104 3.555168 GGTCTCACCGAGTCAAATCAACT 60.555 47.826 0.00 0.00 0.00 3.16
104 105 3.675698 GTCTCACCGAGTCAAATCAACTC 59.324 47.826 0.00 0.00 39.82 3.01
110 111 1.993370 GAGTCAAATCAACTCGGTCGG 59.007 52.381 0.00 0.00 34.33 4.79
111 112 1.343465 AGTCAAATCAACTCGGTCGGT 59.657 47.619 0.00 0.00 0.00 4.69
112 113 1.725164 GTCAAATCAACTCGGTCGGTC 59.275 52.381 0.00 0.00 0.00 4.79
113 114 1.076332 CAAATCAACTCGGTCGGTCC 58.924 55.000 0.00 0.00 0.00 4.46
122 123 4.707791 GGTCGGTCCGAAATGGTT 57.292 55.556 17.32 0.00 37.72 3.67
123 124 2.463592 GGTCGGTCCGAAATGGTTC 58.536 57.895 17.32 0.91 37.72 3.62
124 125 0.036671 GGTCGGTCCGAAATGGTTCT 60.037 55.000 17.32 0.00 37.72 3.01
125 126 1.076332 GTCGGTCCGAAATGGTTCTG 58.924 55.000 17.32 0.00 37.72 3.02
126 127 0.672401 TCGGTCCGAAATGGTTCTGC 60.672 55.000 12.68 0.00 39.52 4.26
127 128 0.953471 CGGTCCGAAATGGTTCTGCA 60.953 55.000 4.91 0.00 39.52 4.41
128 129 0.804989 GGTCCGAAATGGTTCTGCAG 59.195 55.000 7.63 7.63 39.52 4.41
129 130 0.169009 GTCCGAAATGGTTCTGCAGC 59.831 55.000 9.47 0.00 39.52 5.25
130 131 0.036732 TCCGAAATGGTTCTGCAGCT 59.963 50.000 9.47 0.00 39.52 4.24
131 132 0.883833 CCGAAATGGTTCTGCAGCTT 59.116 50.000 9.47 0.00 0.00 3.74
132 133 1.135575 CCGAAATGGTTCTGCAGCTTC 60.136 52.381 9.47 1.34 0.00 3.86
133 134 1.808945 CGAAATGGTTCTGCAGCTTCT 59.191 47.619 9.47 0.00 0.00 2.85
134 135 2.413765 CGAAATGGTTCTGCAGCTTCTG 60.414 50.000 9.47 0.00 34.12 3.02
135 136 2.283145 AATGGTTCTGCAGCTTCTGT 57.717 45.000 9.47 0.00 33.43 3.41
136 137 2.283145 ATGGTTCTGCAGCTTCTGTT 57.717 45.000 9.47 0.00 33.43 3.16
137 138 2.057137 TGGTTCTGCAGCTTCTGTTT 57.943 45.000 9.47 0.00 33.43 2.83
138 139 1.949525 TGGTTCTGCAGCTTCTGTTTC 59.050 47.619 9.47 0.00 33.43 2.78
139 140 2.225467 GGTTCTGCAGCTTCTGTTTCT 58.775 47.619 9.47 0.00 33.43 2.52
140 141 2.031333 GGTTCTGCAGCTTCTGTTTCTG 60.031 50.000 9.47 0.00 33.43 3.02
141 142 2.874701 GTTCTGCAGCTTCTGTTTCTGA 59.125 45.455 9.47 0.00 33.43 3.27
142 143 3.413846 TCTGCAGCTTCTGTTTCTGAT 57.586 42.857 9.47 0.00 33.43 2.90
143 144 3.332919 TCTGCAGCTTCTGTTTCTGATC 58.667 45.455 9.47 0.00 33.43 2.92
144 145 3.007723 TCTGCAGCTTCTGTTTCTGATCT 59.992 43.478 9.47 0.00 33.43 2.75
145 146 3.748083 TGCAGCTTCTGTTTCTGATCTT 58.252 40.909 0.00 0.00 33.43 2.40
146 147 4.898320 TGCAGCTTCTGTTTCTGATCTTA 58.102 39.130 0.00 0.00 33.43 2.10
147 148 5.494724 TGCAGCTTCTGTTTCTGATCTTAT 58.505 37.500 0.00 0.00 33.43 1.73
148 149 5.942236 TGCAGCTTCTGTTTCTGATCTTATT 59.058 36.000 0.00 0.00 33.43 1.40
149 150 6.432162 TGCAGCTTCTGTTTCTGATCTTATTT 59.568 34.615 0.00 0.00 33.43 1.40
150 151 7.040201 TGCAGCTTCTGTTTCTGATCTTATTTT 60.040 33.333 0.00 0.00 33.43 1.82
151 152 7.272948 GCAGCTTCTGTTTCTGATCTTATTTTG 59.727 37.037 0.00 0.00 33.43 2.44
152 153 7.272948 CAGCTTCTGTTTCTGATCTTATTTTGC 59.727 37.037 0.00 0.00 0.00 3.68
153 154 6.529477 GCTTCTGTTTCTGATCTTATTTTGCC 59.471 38.462 0.00 0.00 0.00 4.52
154 155 7.576477 GCTTCTGTTTCTGATCTTATTTTGCCT 60.576 37.037 0.00 0.00 0.00 4.75
155 156 7.765695 TCTGTTTCTGATCTTATTTTGCCTT 57.234 32.000 0.00 0.00 0.00 4.35
156 157 7.820648 TCTGTTTCTGATCTTATTTTGCCTTC 58.179 34.615 0.00 0.00 0.00 3.46
157 158 7.448161 TCTGTTTCTGATCTTATTTTGCCTTCA 59.552 33.333 0.00 0.00 0.00 3.02
158 159 7.370383 TGTTTCTGATCTTATTTTGCCTTCAC 58.630 34.615 0.00 0.00 0.00 3.18
159 160 7.014134 TGTTTCTGATCTTATTTTGCCTTCACA 59.986 33.333 0.00 0.00 0.00 3.58
160 161 7.707624 TTCTGATCTTATTTTGCCTTCACAT 57.292 32.000 0.00 0.00 0.00 3.21
161 162 7.092137 TCTGATCTTATTTTGCCTTCACATG 57.908 36.000 0.00 0.00 0.00 3.21
162 163 6.660521 TCTGATCTTATTTTGCCTTCACATGT 59.339 34.615 0.00 0.00 0.00 3.21
163 164 7.177216 TCTGATCTTATTTTGCCTTCACATGTT 59.823 33.333 0.00 0.00 0.00 2.71
164 165 7.092079 TGATCTTATTTTGCCTTCACATGTTG 58.908 34.615 0.00 0.00 0.00 3.33
165 166 5.229423 TCTTATTTTGCCTTCACATGTTGC 58.771 37.500 0.00 0.00 0.00 4.17
166 167 2.975732 TTTTGCCTTCACATGTTGCA 57.024 40.000 0.00 0.00 0.00 4.08
167 168 3.472283 TTTTGCCTTCACATGTTGCAT 57.528 38.095 0.00 0.00 0.00 3.96
168 169 4.597404 TTTTGCCTTCACATGTTGCATA 57.403 36.364 0.00 0.00 0.00 3.14
169 170 3.574284 TTGCCTTCACATGTTGCATAC 57.426 42.857 0.00 0.00 0.00 2.39
170 171 1.468127 TGCCTTCACATGTTGCATACG 59.532 47.619 0.00 0.00 0.00 3.06
171 172 1.737236 GCCTTCACATGTTGCATACGA 59.263 47.619 0.00 0.00 0.00 3.43
172 173 2.476185 GCCTTCACATGTTGCATACGAC 60.476 50.000 0.00 0.00 0.00 4.34
173 174 2.095853 CCTTCACATGTTGCATACGACC 59.904 50.000 0.00 0.00 0.00 4.79
174 175 2.760634 TCACATGTTGCATACGACCT 57.239 45.000 0.00 0.00 0.00 3.85
175 176 2.616960 TCACATGTTGCATACGACCTC 58.383 47.619 0.00 0.00 0.00 3.85
176 177 1.324435 CACATGTTGCATACGACCTCG 59.676 52.381 0.00 0.00 46.33 4.63
177 178 0.930310 CATGTTGCATACGACCTCGG 59.070 55.000 0.00 0.00 44.95 4.63
178 179 0.821517 ATGTTGCATACGACCTCGGA 59.178 50.000 0.00 0.00 44.95 4.55
179 180 0.821517 TGTTGCATACGACCTCGGAT 59.178 50.000 0.00 0.00 45.12 4.18
180 181 1.206132 TGTTGCATACGACCTCGGATT 59.794 47.619 0.00 0.00 40.60 3.01
181 182 2.427812 TGTTGCATACGACCTCGGATTA 59.572 45.455 0.00 0.00 40.60 1.75
182 183 3.119065 TGTTGCATACGACCTCGGATTAA 60.119 43.478 0.00 0.00 40.60 1.40
183 184 3.364889 TGCATACGACCTCGGATTAAG 57.635 47.619 0.00 0.00 40.60 1.85
184 185 2.953648 TGCATACGACCTCGGATTAAGA 59.046 45.455 0.00 0.00 40.60 2.10
185 186 3.243301 TGCATACGACCTCGGATTAAGAC 60.243 47.826 0.00 0.00 40.60 3.01
186 187 3.243301 GCATACGACCTCGGATTAAGACA 60.243 47.826 0.00 0.00 40.60 3.41
187 188 2.935481 ACGACCTCGGATTAAGACAC 57.065 50.000 0.00 0.00 44.95 3.67
188 189 2.444421 ACGACCTCGGATTAAGACACT 58.556 47.619 0.00 0.00 44.95 3.55
189 190 2.824341 ACGACCTCGGATTAAGACACTT 59.176 45.455 0.00 0.00 44.95 3.16
190 191 3.257624 ACGACCTCGGATTAAGACACTTT 59.742 43.478 0.00 0.00 44.95 2.66
191 192 4.243270 CGACCTCGGATTAAGACACTTTT 58.757 43.478 0.00 0.00 35.37 2.27
192 193 4.689345 CGACCTCGGATTAAGACACTTTTT 59.311 41.667 0.00 0.00 35.37 1.94
193 194 5.865552 CGACCTCGGATTAAGACACTTTTTA 59.134 40.000 0.00 0.00 35.37 1.52
194 195 6.534079 CGACCTCGGATTAAGACACTTTTTAT 59.466 38.462 0.00 0.00 35.37 1.40
195 196 7.703621 CGACCTCGGATTAAGACACTTTTTATA 59.296 37.037 0.00 0.00 35.37 0.98
196 197 9.543783 GACCTCGGATTAAGACACTTTTTATAT 57.456 33.333 0.00 0.00 0.00 0.86
197 198 9.543783 ACCTCGGATTAAGACACTTTTTATATC 57.456 33.333 0.00 0.00 0.00 1.63
198 199 9.542462 CCTCGGATTAAGACACTTTTTATATCA 57.458 33.333 0.00 0.00 0.00 2.15
208 209 8.504005 AGACACTTTTTATATCAAACTCAACCG 58.496 33.333 0.00 0.00 0.00 4.44
209 210 8.161699 ACACTTTTTATATCAAACTCAACCGT 57.838 30.769 0.00 0.00 0.00 4.83
210 211 8.626526 ACACTTTTTATATCAAACTCAACCGTT 58.373 29.630 0.00 0.00 0.00 4.44
211 212 9.458374 CACTTTTTATATCAAACTCAACCGTTT 57.542 29.630 0.00 0.00 37.58 3.60
212 213 9.673454 ACTTTTTATATCAAACTCAACCGTTTC 57.327 29.630 0.00 0.00 35.06 2.78
213 214 9.672086 CTTTTTATATCAAACTCAACCGTTTCA 57.328 29.630 0.00 0.00 35.06 2.69
215 216 9.453325 TTTTATATCAAACTCAACCGTTTCAAC 57.547 29.630 0.00 0.00 35.06 3.18
228 229 3.781341 GTTTCAACGAGACGCATAACA 57.219 42.857 0.00 0.00 0.00 2.41
229 230 4.322101 GTTTCAACGAGACGCATAACAT 57.678 40.909 0.00 0.00 0.00 2.71
230 231 4.708601 GTTTCAACGAGACGCATAACATT 58.291 39.130 0.00 0.00 0.00 2.71
231 232 4.577687 TTCAACGAGACGCATAACATTC 57.422 40.909 0.00 0.00 0.00 2.67
232 233 3.580731 TCAACGAGACGCATAACATTCA 58.419 40.909 0.00 0.00 0.00 2.57
233 234 4.180817 TCAACGAGACGCATAACATTCAT 58.819 39.130 0.00 0.00 0.00 2.57
234 235 4.032786 TCAACGAGACGCATAACATTCATG 59.967 41.667 0.00 0.00 0.00 3.07
235 236 3.521560 ACGAGACGCATAACATTCATGT 58.478 40.909 0.00 0.00 44.20 3.21
250 251 8.680039 AACATTCATGTTGAAACATTTTCCAT 57.320 26.923 5.94 0.00 46.95 3.41
251 252 8.314143 ACATTCATGTTGAAACATTTTCCATC 57.686 30.769 5.94 0.00 46.95 3.51
252 253 7.932491 ACATTCATGTTGAAACATTTTCCATCA 59.068 29.630 5.94 0.00 46.95 3.07
253 254 7.949903 TTCATGTTGAAACATTTTCCATCAG 57.050 32.000 5.94 0.00 46.95 2.90
254 255 7.287512 TCATGTTGAAACATTTTCCATCAGA 57.712 32.000 5.94 0.00 46.95 3.27
255 256 7.372714 TCATGTTGAAACATTTTCCATCAGAG 58.627 34.615 5.94 0.00 46.95 3.35
256 257 6.088016 TGTTGAAACATTTTCCATCAGAGG 57.912 37.500 0.00 0.00 33.17 3.69
257 258 4.789012 TGAAACATTTTCCATCAGAGGC 57.211 40.909 0.00 0.00 0.00 4.70
258 259 3.511146 TGAAACATTTTCCATCAGAGGCC 59.489 43.478 0.00 0.00 0.00 5.19
259 260 2.905415 ACATTTTCCATCAGAGGCCA 57.095 45.000 5.01 0.00 0.00 5.36
260 261 3.393426 ACATTTTCCATCAGAGGCCAT 57.607 42.857 5.01 0.00 0.00 4.40
261 262 4.524802 ACATTTTCCATCAGAGGCCATA 57.475 40.909 5.01 0.00 0.00 2.74
262 263 5.070823 ACATTTTCCATCAGAGGCCATAT 57.929 39.130 5.01 0.00 0.00 1.78
263 264 5.461327 ACATTTTCCATCAGAGGCCATATT 58.539 37.500 5.01 0.00 0.00 1.28
264 265 6.613699 ACATTTTCCATCAGAGGCCATATTA 58.386 36.000 5.01 0.00 0.00 0.98
265 266 7.068702 ACATTTTCCATCAGAGGCCATATTAA 58.931 34.615 5.01 0.00 0.00 1.40
266 267 7.731688 ACATTTTCCATCAGAGGCCATATTAAT 59.268 33.333 5.01 0.00 0.00 1.40
267 268 8.591072 CATTTTCCATCAGAGGCCATATTAATT 58.409 33.333 5.01 0.00 0.00 1.40
268 269 7.528996 TTTCCATCAGAGGCCATATTAATTG 57.471 36.000 5.01 0.00 0.00 2.32
269 270 6.452757 TCCATCAGAGGCCATATTAATTGA 57.547 37.500 5.01 0.00 0.00 2.57
270 271 6.479006 TCCATCAGAGGCCATATTAATTGAG 58.521 40.000 5.01 0.00 0.00 3.02
271 272 6.044754 TCCATCAGAGGCCATATTAATTGAGT 59.955 38.462 5.01 0.00 0.00 3.41
272 273 6.718454 CCATCAGAGGCCATATTAATTGAGTT 59.282 38.462 5.01 0.00 0.00 3.01
273 274 7.232127 CCATCAGAGGCCATATTAATTGAGTTT 59.768 37.037 5.01 0.00 0.00 2.66
274 275 7.807977 TCAGAGGCCATATTAATTGAGTTTC 57.192 36.000 5.01 0.00 0.00 2.78
275 276 7.345691 TCAGAGGCCATATTAATTGAGTTTCA 58.654 34.615 5.01 0.00 0.00 2.69
276 277 8.000709 TCAGAGGCCATATTAATTGAGTTTCAT 58.999 33.333 5.01 0.00 0.00 2.57
277 278 8.080417 CAGAGGCCATATTAATTGAGTTTCATG 58.920 37.037 5.01 0.00 0.00 3.07
278 279 7.781693 AGAGGCCATATTAATTGAGTTTCATGT 59.218 33.333 5.01 0.00 0.00 3.21
279 280 7.945134 AGGCCATATTAATTGAGTTTCATGTC 58.055 34.615 5.01 0.00 0.00 3.06
280 281 7.560991 AGGCCATATTAATTGAGTTTCATGTCA 59.439 33.333 5.01 0.00 0.00 3.58
281 282 8.362639 GGCCATATTAATTGAGTTTCATGTCAT 58.637 33.333 0.00 0.00 0.00 3.06
282 283 9.754382 GCCATATTAATTGAGTTTCATGTCATT 57.246 29.630 0.00 0.00 0.00 2.57
293 294 8.733458 TGAGTTTCATGTCATTCTTTAATCTGG 58.267 33.333 0.00 0.00 0.00 3.86
294 295 8.641498 AGTTTCATGTCATTCTTTAATCTGGT 57.359 30.769 0.00 0.00 0.00 4.00
295 296 8.517878 AGTTTCATGTCATTCTTTAATCTGGTG 58.482 33.333 0.00 0.00 0.00 4.17
296 297 8.299570 GTTTCATGTCATTCTTTAATCTGGTGT 58.700 33.333 0.00 0.00 0.00 4.16
297 298 7.615582 TCATGTCATTCTTTAATCTGGTGTC 57.384 36.000 0.00 0.00 0.00 3.67
298 299 7.167535 TCATGTCATTCTTTAATCTGGTGTCA 58.832 34.615 0.00 0.00 0.00 3.58
299 300 7.335171 TCATGTCATTCTTTAATCTGGTGTCAG 59.665 37.037 0.00 0.00 42.21 3.51
300 301 5.412594 TGTCATTCTTTAATCTGGTGTCAGC 59.587 40.000 0.00 0.00 40.69 4.26
301 302 5.412594 GTCATTCTTTAATCTGGTGTCAGCA 59.587 40.000 4.37 4.37 40.69 4.41
302 303 6.094603 GTCATTCTTTAATCTGGTGTCAGCAT 59.905 38.462 4.95 0.00 40.69 3.79
303 304 5.885230 TTCTTTAATCTGGTGTCAGCATG 57.115 39.130 4.95 0.51 40.69 4.06
316 317 2.902523 TCAGCATGAGCATCTCTGAAC 58.097 47.619 0.00 0.00 42.56 3.18
317 318 2.500504 TCAGCATGAGCATCTCTGAACT 59.499 45.455 0.00 0.00 42.56 3.01
318 319 3.055312 TCAGCATGAGCATCTCTGAACTT 60.055 43.478 0.00 0.00 42.56 2.66
319 320 3.064134 CAGCATGAGCATCTCTGAACTTG 59.936 47.826 0.00 0.00 45.49 3.16
320 321 3.008330 GCATGAGCATCTCTGAACTTGT 58.992 45.455 0.00 0.00 41.58 3.16
321 322 3.063725 GCATGAGCATCTCTGAACTTGTC 59.936 47.826 0.00 0.00 41.58 3.18
322 323 4.251268 CATGAGCATCTCTGAACTTGTCA 58.749 43.478 0.00 0.00 34.92 3.58
323 324 4.548451 TGAGCATCTCTGAACTTGTCAT 57.452 40.909 0.00 0.00 33.06 3.06
324 325 5.665916 TGAGCATCTCTGAACTTGTCATA 57.334 39.130 0.00 0.00 33.06 2.15
325 326 6.041423 TGAGCATCTCTGAACTTGTCATAA 57.959 37.500 0.00 0.00 33.06 1.90
326 327 5.871524 TGAGCATCTCTGAACTTGTCATAAC 59.128 40.000 0.00 0.00 33.06 1.89
327 328 6.047511 AGCATCTCTGAACTTGTCATAACT 57.952 37.500 0.00 0.00 35.07 2.24
328 329 6.471146 AGCATCTCTGAACTTGTCATAACTT 58.529 36.000 0.00 0.00 35.07 2.66
329 330 6.939163 AGCATCTCTGAACTTGTCATAACTTT 59.061 34.615 0.00 0.00 35.07 2.66
330 331 7.446625 AGCATCTCTGAACTTGTCATAACTTTT 59.553 33.333 0.00 0.00 35.07 2.27
331 332 7.536622 GCATCTCTGAACTTGTCATAACTTTTG 59.463 37.037 0.00 0.00 35.07 2.44
332 333 6.959361 TCTCTGAACTTGTCATAACTTTTGC 58.041 36.000 0.00 0.00 35.07 3.68
333 334 6.542005 TCTCTGAACTTGTCATAACTTTTGCA 59.458 34.615 0.00 0.00 35.07 4.08
334 335 7.229306 TCTCTGAACTTGTCATAACTTTTGCAT 59.771 33.333 0.00 0.00 35.07 3.96
335 336 7.362662 TCTGAACTTGTCATAACTTTTGCATC 58.637 34.615 0.00 0.00 35.07 3.91
336 337 6.446318 TGAACTTGTCATAACTTTTGCATCC 58.554 36.000 0.00 0.00 0.00 3.51
337 338 6.040278 TGAACTTGTCATAACTTTTGCATCCA 59.960 34.615 0.00 0.00 0.00 3.41
338 339 6.403866 ACTTGTCATAACTTTTGCATCCAA 57.596 33.333 0.00 0.00 0.00 3.53
339 340 6.449698 ACTTGTCATAACTTTTGCATCCAAG 58.550 36.000 0.00 0.00 31.52 3.61
340 341 6.040842 ACTTGTCATAACTTTTGCATCCAAGT 59.959 34.615 0.00 0.00 35.32 3.16
341 342 6.403866 TGTCATAACTTTTGCATCCAAGTT 57.596 33.333 18.14 18.14 43.91 2.66
342 343 6.446318 TGTCATAACTTTTGCATCCAAGTTC 58.554 36.000 17.78 8.40 41.37 3.01
343 344 6.265196 TGTCATAACTTTTGCATCCAAGTTCT 59.735 34.615 17.78 9.42 41.37 3.01
344 345 6.583806 GTCATAACTTTTGCATCCAAGTTCTG 59.416 38.462 17.78 17.55 41.37 3.02
345 346 6.265196 TCATAACTTTTGCATCCAAGTTCTGT 59.735 34.615 17.78 7.45 41.37 3.41
346 347 5.343307 AACTTTTGCATCCAAGTTCTGTT 57.657 34.783 11.52 0.00 38.59 3.16
347 348 5.343307 ACTTTTGCATCCAAGTTCTGTTT 57.657 34.783 0.00 0.00 28.27 2.83
348 349 5.733676 ACTTTTGCATCCAAGTTCTGTTTT 58.266 33.333 0.00 0.00 28.27 2.43
349 350 6.872920 ACTTTTGCATCCAAGTTCTGTTTTA 58.127 32.000 0.00 0.00 28.27 1.52
350 351 6.980397 ACTTTTGCATCCAAGTTCTGTTTTAG 59.020 34.615 0.00 0.00 28.27 1.85
351 352 6.707440 TTTGCATCCAAGTTCTGTTTTAGA 57.293 33.333 0.00 0.00 31.52 2.10
352 353 5.689383 TGCATCCAAGTTCTGTTTTAGAC 57.311 39.130 0.00 0.00 34.43 2.59
353 354 4.518970 TGCATCCAAGTTCTGTTTTAGACC 59.481 41.667 0.00 0.00 34.43 3.85
354 355 4.518970 GCATCCAAGTTCTGTTTTAGACCA 59.481 41.667 0.00 0.00 34.43 4.02
355 356 5.183904 GCATCCAAGTTCTGTTTTAGACCAT 59.816 40.000 0.00 0.00 34.43 3.55
356 357 6.623767 GCATCCAAGTTCTGTTTTAGACCATC 60.624 42.308 0.00 0.00 34.43 3.51
357 358 5.935945 TCCAAGTTCTGTTTTAGACCATCA 58.064 37.500 0.00 0.00 34.43 3.07
358 359 6.361433 TCCAAGTTCTGTTTTAGACCATCAA 58.639 36.000 0.00 0.00 34.43 2.57
359 360 6.262273 TCCAAGTTCTGTTTTAGACCATCAAC 59.738 38.462 0.00 0.00 34.43 3.18
360 361 6.039270 CCAAGTTCTGTTTTAGACCATCAACA 59.961 38.462 0.00 0.00 34.43 3.33
361 362 7.255590 CCAAGTTCTGTTTTAGACCATCAACAT 60.256 37.037 0.00 0.00 34.43 2.71
362 363 8.783093 CAAGTTCTGTTTTAGACCATCAACATA 58.217 33.333 0.00 0.00 34.43 2.29
363 364 9.520515 AAGTTCTGTTTTAGACCATCAACATAT 57.479 29.630 0.00 0.00 34.43 1.78
364 365 9.167311 AGTTCTGTTTTAGACCATCAACATATC 57.833 33.333 0.00 0.00 34.43 1.63
365 366 8.398665 GTTCTGTTTTAGACCATCAACATATCC 58.601 37.037 0.00 0.00 34.43 2.59
366 367 6.761242 TCTGTTTTAGACCATCAACATATCCG 59.239 38.462 0.00 0.00 0.00 4.18
367 368 6.411376 TGTTTTAGACCATCAACATATCCGT 58.589 36.000 0.00 0.00 0.00 4.69
368 369 6.882140 TGTTTTAGACCATCAACATATCCGTT 59.118 34.615 0.00 0.00 0.00 4.44
369 370 7.392113 TGTTTTAGACCATCAACATATCCGTTT 59.608 33.333 0.00 0.00 0.00 3.60
370 371 7.931578 TTTAGACCATCAACATATCCGTTTT 57.068 32.000 0.00 0.00 0.00 2.43
371 372 5.818136 AGACCATCAACATATCCGTTTTG 57.182 39.130 0.00 0.00 0.00 2.44
372 373 5.496556 AGACCATCAACATATCCGTTTTGA 58.503 37.500 0.00 0.00 32.71 2.69
373 374 6.122277 AGACCATCAACATATCCGTTTTGAT 58.878 36.000 0.00 0.00 38.87 2.57
374 375 6.260936 AGACCATCAACATATCCGTTTTGATC 59.739 38.462 0.00 0.00 36.72 2.92
375 376 6.122277 ACCATCAACATATCCGTTTTGATCT 58.878 36.000 0.00 0.00 36.72 2.75
376 377 6.603201 ACCATCAACATATCCGTTTTGATCTT 59.397 34.615 0.00 0.00 36.72 2.40
377 378 7.134815 CCATCAACATATCCGTTTTGATCTTC 58.865 38.462 0.00 0.00 36.72 2.87
378 379 7.012704 CCATCAACATATCCGTTTTGATCTTCT 59.987 37.037 0.00 0.00 36.72 2.85
379 380 7.921786 TCAACATATCCGTTTTGATCTTCTT 57.078 32.000 0.00 0.00 0.00 2.52
380 381 7.751732 TCAACATATCCGTTTTGATCTTCTTG 58.248 34.615 0.00 0.00 0.00 3.02
381 382 7.606073 TCAACATATCCGTTTTGATCTTCTTGA 59.394 33.333 0.00 0.00 0.00 3.02
382 383 7.921786 ACATATCCGTTTTGATCTTCTTGAA 57.078 32.000 0.00 0.00 0.00 2.69
383 384 7.978982 ACATATCCGTTTTGATCTTCTTGAAG 58.021 34.615 4.13 4.13 0.00 3.02
384 385 7.824289 ACATATCCGTTTTGATCTTCTTGAAGA 59.176 33.333 14.41 14.41 0.00 2.87
385 386 6.734104 ATCCGTTTTGATCTTCTTGAAGAG 57.266 37.500 16.66 3.69 31.48 2.85
386 387 5.853936 TCCGTTTTGATCTTCTTGAAGAGA 58.146 37.500 16.66 5.33 31.48 3.10
387 388 5.928839 TCCGTTTTGATCTTCTTGAAGAGAG 59.071 40.000 16.66 0.00 35.37 3.20
388 389 5.390356 CCGTTTTGATCTTCTTGAAGAGAGC 60.390 44.000 16.66 10.12 35.37 4.09
389 390 5.390356 CGTTTTGATCTTCTTGAAGAGAGCC 60.390 44.000 16.66 8.00 35.37 4.70
390 391 4.897509 TTGATCTTCTTGAAGAGAGCCA 57.102 40.909 16.66 9.94 35.37 4.75
391 392 5.432680 TTGATCTTCTTGAAGAGAGCCAT 57.567 39.130 16.66 1.30 35.37 4.40
392 393 5.432680 TGATCTTCTTGAAGAGAGCCATT 57.567 39.130 16.66 0.66 35.37 3.16
393 394 5.426504 TGATCTTCTTGAAGAGAGCCATTC 58.573 41.667 16.66 9.19 35.37 2.67
394 395 4.213564 TCTTCTTGAAGAGAGCCATTCC 57.786 45.455 8.80 0.00 35.37 3.01
395 396 3.584406 TCTTCTTGAAGAGAGCCATTCCA 59.416 43.478 8.80 0.00 35.37 3.53
396 397 4.226846 TCTTCTTGAAGAGAGCCATTCCAT 59.773 41.667 8.80 0.00 35.37 3.41
397 398 3.882444 TCTTGAAGAGAGCCATTCCATG 58.118 45.455 0.00 0.00 0.00 3.66
398 399 3.520721 TCTTGAAGAGAGCCATTCCATGA 59.479 43.478 0.00 0.00 0.00 3.07
399 400 4.165565 TCTTGAAGAGAGCCATTCCATGAT 59.834 41.667 0.00 0.00 0.00 2.45
400 401 3.816994 TGAAGAGAGCCATTCCATGATG 58.183 45.455 0.00 0.00 0.00 3.07
401 402 3.457012 TGAAGAGAGCCATTCCATGATGA 59.543 43.478 0.00 0.00 0.00 2.92
402 403 3.488778 AGAGAGCCATTCCATGATGAC 57.511 47.619 0.00 0.00 0.00 3.06
403 404 3.047115 AGAGAGCCATTCCATGATGACT 58.953 45.455 0.00 0.00 0.00 3.41
404 405 3.458857 AGAGAGCCATTCCATGATGACTT 59.541 43.478 0.00 0.00 0.00 3.01
405 406 4.079901 AGAGAGCCATTCCATGATGACTTT 60.080 41.667 0.00 0.00 0.00 2.66
406 407 4.205587 AGAGCCATTCCATGATGACTTTC 58.794 43.478 0.00 0.00 0.00 2.62
407 408 3.949754 GAGCCATTCCATGATGACTTTCA 59.050 43.478 0.00 0.00 0.00 2.69
408 409 3.952323 AGCCATTCCATGATGACTTTCAG 59.048 43.478 0.00 0.00 0.00 3.02
409 410 3.698040 GCCATTCCATGATGACTTTCAGT 59.302 43.478 0.00 0.00 0.00 3.41
410 411 4.201990 GCCATTCCATGATGACTTTCAGTC 60.202 45.833 0.00 0.00 45.26 3.51
426 427 9.548208 GACTTTCAGTCATAAGTTTGAATTAGC 57.452 33.333 0.00 0.00 44.45 3.09
427 428 9.289782 ACTTTCAGTCATAAGTTTGAATTAGCT 57.710 29.630 0.00 0.00 30.72 3.32
429 430 9.897744 TTTCAGTCATAAGTTTGAATTAGCTTG 57.102 29.630 0.00 0.00 30.45 4.01
430 431 8.846943 TCAGTCATAAGTTTGAATTAGCTTGA 57.153 30.769 0.00 0.00 0.00 3.02
431 432 8.721478 TCAGTCATAAGTTTGAATTAGCTTGAC 58.279 33.333 0.00 0.00 0.00 3.18
432 433 8.506437 CAGTCATAAGTTTGAATTAGCTTGACA 58.494 33.333 8.55 0.00 0.00 3.58
433 434 9.236006 AGTCATAAGTTTGAATTAGCTTGACAT 57.764 29.630 8.55 0.00 0.00 3.06
436 437 9.443283 CATAAGTTTGAATTAGCTTGACATAGC 57.557 33.333 0.00 0.00 41.53 2.97
447 448 5.302357 GCTTGACATAGCTTTTAGCAACT 57.698 39.130 0.00 0.00 45.56 3.16
448 449 5.703876 GCTTGACATAGCTTTTAGCAACTT 58.296 37.500 0.00 0.00 45.56 2.66
449 450 6.152379 GCTTGACATAGCTTTTAGCAACTTT 58.848 36.000 0.00 0.00 45.56 2.66
450 451 6.642540 GCTTGACATAGCTTTTAGCAACTTTT 59.357 34.615 0.00 0.00 45.56 2.27
451 452 7.807907 GCTTGACATAGCTTTTAGCAACTTTTA 59.192 33.333 0.00 0.00 45.56 1.52
452 453 9.118236 CTTGACATAGCTTTTAGCAACTTTTAC 57.882 33.333 0.00 0.00 45.56 2.01
453 454 7.295201 TGACATAGCTTTTAGCAACTTTTACG 58.705 34.615 0.00 0.00 45.56 3.18
454 455 7.171848 TGACATAGCTTTTAGCAACTTTTACGA 59.828 33.333 0.00 0.00 45.56 3.43
455 456 8.040716 ACATAGCTTTTAGCAACTTTTACGAT 57.959 30.769 0.00 0.00 45.56 3.73
456 457 8.512138 ACATAGCTTTTAGCAACTTTTACGATT 58.488 29.630 0.00 0.00 45.56 3.34
457 458 8.788813 CATAGCTTTTAGCAACTTTTACGATTG 58.211 33.333 0.00 0.00 45.56 2.67
458 459 6.735130 AGCTTTTAGCAACTTTTACGATTGT 58.265 32.000 1.09 0.00 45.56 2.71
459 460 6.636850 AGCTTTTAGCAACTTTTACGATTGTG 59.363 34.615 1.09 0.00 45.56 3.33
460 461 6.416750 GCTTTTAGCAACTTTTACGATTGTGT 59.583 34.615 0.00 0.00 41.89 3.72
461 462 7.357287 GCTTTTAGCAACTTTTACGATTGTGTC 60.357 37.037 0.00 0.00 41.89 3.67
462 463 6.606234 TTAGCAACTTTTACGATTGTGTCA 57.394 33.333 0.00 0.00 0.00 3.58
463 464 4.844267 AGCAACTTTTACGATTGTGTCAC 58.156 39.130 0.00 0.00 0.00 3.67
464 465 4.574828 AGCAACTTTTACGATTGTGTCACT 59.425 37.500 4.27 0.00 0.00 3.41
465 466 5.065988 AGCAACTTTTACGATTGTGTCACTT 59.934 36.000 4.27 0.00 0.00 3.16
466 467 5.741982 GCAACTTTTACGATTGTGTCACTTT 59.258 36.000 4.27 0.00 0.00 2.66
467 468 6.252655 GCAACTTTTACGATTGTGTCACTTTT 59.747 34.615 4.27 0.00 0.00 2.27
468 469 7.429920 GCAACTTTTACGATTGTGTCACTTTTA 59.570 33.333 4.27 0.00 0.00 1.52
469 470 9.279904 CAACTTTTACGATTGTGTCACTTTTAA 57.720 29.630 4.27 0.00 0.00 1.52
470 471 9.498307 AACTTTTACGATTGTGTCACTTTTAAG 57.502 29.630 4.27 0.91 0.00 1.85
471 472 8.671028 ACTTTTACGATTGTGTCACTTTTAAGT 58.329 29.630 4.27 0.41 40.60 2.24
485 486 6.767524 ACTTTTAAGTGTCAACATTGTGGA 57.232 33.333 0.00 0.00 37.98 4.02
486 487 7.164230 ACTTTTAAGTGTCAACATTGTGGAA 57.836 32.000 0.00 0.00 37.98 3.53
487 488 7.033185 ACTTTTAAGTGTCAACATTGTGGAAC 58.967 34.615 0.00 0.00 37.98 3.62
488 489 3.691049 AAGTGTCAACATTGTGGAACG 57.309 42.857 0.00 0.00 42.39 3.95
489 490 2.912771 AGTGTCAACATTGTGGAACGA 58.087 42.857 0.00 0.00 42.39 3.85
490 491 2.612212 AGTGTCAACATTGTGGAACGAC 59.388 45.455 0.00 0.00 42.39 4.34
491 492 1.595328 TGTCAACATTGTGGAACGACG 59.405 47.619 0.00 0.00 42.39 5.12
492 493 1.862201 GTCAACATTGTGGAACGACGA 59.138 47.619 0.00 0.00 42.39 4.20
493 494 2.478894 GTCAACATTGTGGAACGACGAT 59.521 45.455 0.00 0.00 42.39 3.73
494 495 2.734606 TCAACATTGTGGAACGACGATC 59.265 45.455 0.00 0.00 42.39 3.69
495 496 2.736721 CAACATTGTGGAACGACGATCT 59.263 45.455 0.00 0.00 42.39 2.75
496 497 2.607187 ACATTGTGGAACGACGATCTC 58.393 47.619 0.00 0.00 42.39 2.75
497 498 1.927174 CATTGTGGAACGACGATCTCC 59.073 52.381 0.00 5.15 42.39 3.71
498 499 1.254026 TTGTGGAACGACGATCTCCT 58.746 50.000 0.00 0.00 42.39 3.69
499 500 1.254026 TGTGGAACGACGATCTCCTT 58.746 50.000 0.00 0.00 42.39 3.36
500 501 1.616865 TGTGGAACGACGATCTCCTTT 59.383 47.619 0.00 0.00 42.39 3.11
501 502 2.036733 TGTGGAACGACGATCTCCTTTT 59.963 45.455 0.00 0.00 42.39 2.27
502 503 3.064931 GTGGAACGACGATCTCCTTTTT 58.935 45.455 0.00 0.00 0.00 1.94
503 504 3.123116 GTGGAACGACGATCTCCTTTTTC 59.877 47.826 0.00 0.00 0.00 2.29
504 505 2.344741 GGAACGACGATCTCCTTTTTCG 59.655 50.000 0.00 0.00 38.76 3.46
505 506 1.347320 ACGACGATCTCCTTTTTCGC 58.653 50.000 0.00 0.00 36.37 4.70
506 507 0.294887 CGACGATCTCCTTTTTCGCG 59.705 55.000 0.00 0.00 36.37 5.87
507 508 1.347320 GACGATCTCCTTTTTCGCGT 58.653 50.000 5.77 0.00 36.37 6.01
514 515 2.758979 TCTCCTTTTTCGCGTATCTCCT 59.241 45.455 5.77 0.00 0.00 3.69
517 518 3.000727 CCTTTTTCGCGTATCTCCTTGT 58.999 45.455 5.77 0.00 0.00 3.16
522 523 1.591863 GCGTATCTCCTTGTCCGCC 60.592 63.158 0.00 0.00 35.45 6.13
526 527 1.672854 TATCTCCTTGTCCGCCCGTG 61.673 60.000 0.00 0.00 0.00 4.94
528 529 4.308458 TCCTTGTCCGCCCGTGTG 62.308 66.667 0.00 0.00 0.00 3.82
529 530 4.619227 CCTTGTCCGCCCGTGTGT 62.619 66.667 0.00 0.00 0.00 3.72
565 566 4.988598 CCGTTGAGTGCACCGGCT 62.989 66.667 17.38 0.00 43.19 5.52
569 570 3.535629 TTGAGTGCACCGGCTGGAG 62.536 63.158 21.41 12.56 41.91 3.86
603 606 3.041940 CCACGAAGCGACCCACAC 61.042 66.667 0.00 0.00 0.00 3.82
641 644 2.019951 CGTGTCCGTTTGGGTCTCG 61.020 63.158 0.00 0.00 35.28 4.04
642 645 2.029964 TGTCCGTTTGGGTCTCGC 59.970 61.111 0.00 0.00 37.00 5.03
666 674 0.240145 GGAGTTGCCCTTACGTTTGC 59.760 55.000 0.00 0.00 0.00 3.68
679 687 0.161024 CGTTTGCGTCGTTTCTCCTC 59.839 55.000 0.00 0.00 0.00 3.71
698 707 1.669115 GTGGTCGTGCAGTGCAGAT 60.669 57.895 20.42 0.00 40.08 2.90
712 721 3.696051 AGTGCAGATGTCACAGTGTTTTT 59.304 39.130 0.00 0.00 36.93 1.94
724 733 2.869801 CAGTGTTTTTGTGAGCTCCGTA 59.130 45.455 12.15 0.00 0.00 4.02
728 737 4.909880 GTGTTTTTGTGAGCTCCGTAATTC 59.090 41.667 12.15 0.00 0.00 2.17
736 745 3.684305 TGAGCTCCGTAATTCATGTTGTG 59.316 43.478 12.15 0.00 0.00 3.33
741 750 2.415168 CCGTAATTCATGTTGTGCGAGT 59.585 45.455 0.00 0.00 0.00 4.18
798 807 0.804364 CACAATCCACATGACCCGTG 59.196 55.000 0.00 0.00 0.00 4.94
799 808 0.960364 ACAATCCACATGACCCGTGC 60.960 55.000 0.00 0.00 32.85 5.34
800 809 1.378514 AATCCACATGACCCGTGCC 60.379 57.895 0.00 0.00 32.85 5.01
801 810 3.680620 ATCCACATGACCCGTGCCG 62.681 63.158 0.00 0.00 32.85 5.69
874 883 5.928839 CCTATATAGCGCTTCATTCTGTTGT 59.071 40.000 18.68 0.00 0.00 3.32
880 889 3.372206 GCGCTTCATTCTGTTGTATCAGT 59.628 43.478 0.00 0.00 36.85 3.41
887 896 6.577103 TCATTCTGTTGTATCAGTCTGATCC 58.423 40.000 18.74 8.54 38.26 3.36
889 898 4.614475 TCTGTTGTATCAGTCTGATCCCT 58.386 43.478 18.74 0.00 38.26 4.20
895 904 1.763968 TCAGTCTGATCCCTACACGG 58.236 55.000 0.00 0.00 0.00 4.94
913 927 2.295885 CGGGTATACACGGACTTCTCT 58.704 52.381 19.93 0.00 39.49 3.10
916 930 4.381292 CGGGTATACACGGACTTCTCTTTT 60.381 45.833 19.93 0.00 39.49 2.27
917 931 5.485620 GGGTATACACGGACTTCTCTTTTT 58.514 41.667 5.01 0.00 0.00 1.94
946 960 8.610248 TTTTGAAATAATACACGGACTTCTCA 57.390 30.769 0.00 0.00 0.00 3.27
947 961 8.786826 TTTGAAATAATACACGGACTTCTCAT 57.213 30.769 0.00 0.00 0.00 2.90
948 962 8.786826 TTGAAATAATACACGGACTTCTCATT 57.213 30.769 0.00 0.00 0.00 2.57
949 963 8.196802 TGAAATAATACACGGACTTCTCATTG 57.803 34.615 0.00 0.00 0.00 2.82
950 964 8.038351 TGAAATAATACACGGACTTCTCATTGA 58.962 33.333 0.00 0.00 0.00 2.57
951 965 8.964476 AAATAATACACGGACTTCTCATTGAT 57.036 30.769 0.00 0.00 0.00 2.57
952 966 8.964476 AATAATACACGGACTTCTCATTGATT 57.036 30.769 0.00 0.00 0.00 2.57
953 967 6.668541 AATACACGGACTTCTCATTGATTG 57.331 37.500 0.00 0.00 0.00 2.67
954 968 4.271696 ACACGGACTTCTCATTGATTGA 57.728 40.909 0.00 0.00 0.00 2.57
955 969 3.997021 ACACGGACTTCTCATTGATTGAC 59.003 43.478 0.00 0.00 0.00 3.18
956 970 4.248859 CACGGACTTCTCATTGATTGACT 58.751 43.478 0.00 0.00 0.00 3.41
960 974 4.142730 GGACTTCTCATTGATTGACTGTGC 60.143 45.833 0.00 0.00 0.00 4.57
1017 1037 2.929483 ATGCAATCCCTCGGGCAT 59.071 55.556 0.00 0.00 41.81 4.40
1278 1298 4.821589 GACCTCGGCCCGCTCAAG 62.822 72.222 0.00 0.00 0.00 3.02
1312 1332 0.914644 CCTCCCATTTCTCCTCTGCA 59.085 55.000 0.00 0.00 0.00 4.41
1368 1388 1.148157 CTACCAGCCATTCTGCGTCG 61.148 60.000 0.00 0.00 41.50 5.12
1958 1978 2.456119 CGTTCATCAGAGCCGGCAC 61.456 63.158 31.54 24.27 0.00 5.01
1989 2009 4.162690 ATTCAGGAGGCCGCCGAC 62.163 66.667 20.86 0.55 0.00 4.79
2045 2065 1.411246 CATCGTCCGTCTATTTGGGGA 59.589 52.381 0.00 0.00 0.00 4.81
2048 2068 1.594331 GTCCGTCTATTTGGGGATGC 58.406 55.000 0.00 0.00 0.00 3.91
2074 2097 5.348179 TCGAGTTAGAGACAGAAGAGTAACG 59.652 44.000 0.00 0.00 0.00 3.18
2104 2127 3.945285 GTCAGGATATTTCGGGCTTTTCA 59.055 43.478 0.00 0.00 0.00 2.69
2129 2188 2.605257 AGGTATAATCTGTGGCCGCTA 58.395 47.619 18.96 6.09 0.00 4.26
2130 2189 3.173965 AGGTATAATCTGTGGCCGCTAT 58.826 45.455 18.96 9.32 0.00 2.97
2131 2190 3.055819 AGGTATAATCTGTGGCCGCTATG 60.056 47.826 18.96 7.97 0.00 2.23
2134 2193 0.107017 AATCTGTGGCCGCTATGCTT 60.107 50.000 18.96 3.06 0.00 3.91
2318 4454 5.504853 TGGTCCAAATAAGTATGTCATGCA 58.495 37.500 3.61 0.00 0.00 3.96
2323 4459 8.408601 GTCCAAATAAGTATGTCATGCATTTCT 58.591 33.333 0.00 5.34 38.94 2.52
2397 4533 8.073467 TCCTTTGTGAGAAAGGTTACAATTTT 57.927 30.769 19.08 0.00 45.37 1.82
2398 4534 7.978975 TCCTTTGTGAGAAAGGTTACAATTTTG 59.021 33.333 19.08 0.00 45.37 2.44
2510 4646 6.206634 ACAAATGCTCAAACGAAGAAATAGGA 59.793 34.615 0.00 0.00 0.00 2.94
2520 4656 6.743575 ACGAAGAAATAGGAAAATCACAGG 57.256 37.500 0.00 0.00 0.00 4.00
2547 4683 7.447374 AAATGATAACAGTCGTCAAAATCCA 57.553 32.000 0.00 0.00 0.00 3.41
2614 4750 6.148811 TCAATAACCTTCAAATTGTCCGAGTC 59.851 38.462 0.00 0.00 33.35 3.36
2656 4792 2.668457 GCGTCCTTTGTGTGATAGACAG 59.332 50.000 0.00 0.00 34.28 3.51
2684 4820 1.273327 GGGCCAAAGGTTCAGTCATTG 59.727 52.381 4.39 0.00 0.00 2.82
2709 4845 1.737838 TCAGCACACAAATCGATCCC 58.262 50.000 0.00 0.00 0.00 3.85
2757 5186 2.040412 GACTTTGTCATCCCCCAAGACT 59.960 50.000 0.00 0.00 33.56 3.24
2783 5212 1.853250 GCAGTGCCCCTAAGGAGGTT 61.853 60.000 2.85 0.00 41.95 3.50
2892 5321 8.677148 AGAAGAAGCAATTACAAAGTTAGTCA 57.323 30.769 0.00 0.00 0.00 3.41
2901 5330 3.323243 ACAAAGTTAGTCATAAGCGCGT 58.677 40.909 8.43 0.00 0.00 6.01
2959 5388 2.600470 TGGACCAGTTTACGACGTTT 57.400 45.000 5.50 0.00 0.00 3.60
3031 5460 6.923508 TCCACAATGTATAAATACTGCTCTCG 59.076 38.462 2.07 0.00 34.41 4.04
3043 5475 8.690680 AAATACTGCTCTCGTAAAAGAAGTAG 57.309 34.615 0.00 0.00 27.64 2.57
3044 5476 5.061920 ACTGCTCTCGTAAAAGAAGTAGG 57.938 43.478 0.00 0.00 0.00 3.18
3045 5477 4.765856 ACTGCTCTCGTAAAAGAAGTAGGA 59.234 41.667 0.00 0.00 0.00 2.94
3046 5478 5.243283 ACTGCTCTCGTAAAAGAAGTAGGAA 59.757 40.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.071471 ACTCGGTGGCTCCAAGTTG 59.929 57.895 6.39 0.00 35.57 3.16
1 2 1.071471 CACTCGGTGGCTCCAAGTT 59.929 57.895 6.39 0.00 35.57 2.66
2 3 2.743718 CACTCGGTGGCTCCAAGT 59.256 61.111 6.39 0.00 35.57 3.16
13 14 0.234884 GACGAAAGCAAACCACTCGG 59.765 55.000 0.00 0.00 33.89 4.63
14 15 0.234884 GGACGAAAGCAAACCACTCG 59.765 55.000 0.00 0.00 35.68 4.18
15 16 0.591659 GGGACGAAAGCAAACCACTC 59.408 55.000 0.00 0.00 0.00 3.51
16 17 0.106918 TGGGACGAAAGCAAACCACT 60.107 50.000 0.00 0.00 0.00 4.00
17 18 0.030235 GTGGGACGAAAGCAAACCAC 59.970 55.000 0.00 0.00 41.18 4.16
18 19 0.106918 AGTGGGACGAAAGCAAACCA 60.107 50.000 0.00 0.00 0.00 3.67
19 20 0.310854 CAGTGGGACGAAAGCAAACC 59.689 55.000 0.00 0.00 0.00 3.27
20 21 1.264288 CTCAGTGGGACGAAAGCAAAC 59.736 52.381 0.00 0.00 0.00 2.93
21 22 1.134220 ACTCAGTGGGACGAAAGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
22 23 0.468226 ACTCAGTGGGACGAAAGCAA 59.532 50.000 0.00 0.00 0.00 3.91
23 24 0.468226 AACTCAGTGGGACGAAAGCA 59.532 50.000 0.00 0.00 0.00 3.91
24 25 2.450609 TAACTCAGTGGGACGAAAGC 57.549 50.000 0.00 0.00 0.00 3.51
25 26 2.729882 CGTTAACTCAGTGGGACGAAAG 59.270 50.000 0.00 0.00 32.73 2.62
26 27 2.101249 ACGTTAACTCAGTGGGACGAAA 59.899 45.455 9.48 0.00 34.85 3.46
27 28 1.682854 ACGTTAACTCAGTGGGACGAA 59.317 47.619 9.48 0.00 34.85 3.85
28 29 1.001048 CACGTTAACTCAGTGGGACGA 60.001 52.381 9.48 0.00 34.85 4.20
29 30 1.415374 CACGTTAACTCAGTGGGACG 58.585 55.000 0.00 0.00 36.65 4.79
30 31 1.145803 GCACGTTAACTCAGTGGGAC 58.854 55.000 12.24 0.00 36.48 4.46
31 32 0.034337 GGCACGTTAACTCAGTGGGA 59.966 55.000 12.24 0.00 36.48 4.37
32 33 0.034896 AGGCACGTTAACTCAGTGGG 59.965 55.000 12.24 0.00 36.48 4.61
33 34 1.148310 CAGGCACGTTAACTCAGTGG 58.852 55.000 12.24 0.00 36.48 4.00
34 35 1.792949 GTCAGGCACGTTAACTCAGTG 59.207 52.381 3.71 5.94 38.77 3.66
35 36 1.270147 GGTCAGGCACGTTAACTCAGT 60.270 52.381 3.71 0.00 0.00 3.41
36 37 1.000955 AGGTCAGGCACGTTAACTCAG 59.999 52.381 3.71 0.00 0.00 3.35
37 38 1.045407 AGGTCAGGCACGTTAACTCA 58.955 50.000 3.71 0.00 0.00 3.41
38 39 2.067013 GAAGGTCAGGCACGTTAACTC 58.933 52.381 3.71 0.00 33.12 3.01
39 40 1.692519 AGAAGGTCAGGCACGTTAACT 59.307 47.619 3.71 0.00 33.12 2.24
40 41 2.165319 AGAAGGTCAGGCACGTTAAC 57.835 50.000 0.00 0.00 33.12 2.01
41 42 5.664294 TTATAGAAGGTCAGGCACGTTAA 57.336 39.130 0.00 0.00 33.12 2.01
42 43 5.597182 AGATTATAGAAGGTCAGGCACGTTA 59.403 40.000 0.00 0.00 33.12 3.18
43 44 4.406003 AGATTATAGAAGGTCAGGCACGTT 59.594 41.667 0.00 0.00 35.75 3.99
44 45 3.961408 AGATTATAGAAGGTCAGGCACGT 59.039 43.478 0.00 0.00 0.00 4.49
45 46 4.592485 AGATTATAGAAGGTCAGGCACG 57.408 45.455 0.00 0.00 0.00 5.34
46 47 6.168270 AGAAGATTATAGAAGGTCAGGCAC 57.832 41.667 0.00 0.00 0.00 5.01
47 48 9.775539 ATATAGAAGATTATAGAAGGTCAGGCA 57.224 33.333 0.00 0.00 0.00 4.75
63 64 9.084533 GGTGAGACCAAGTTAGATATAGAAGAT 57.915 37.037 0.00 0.00 38.42 2.40
64 65 7.228906 CGGTGAGACCAAGTTAGATATAGAAGA 59.771 40.741 0.00 0.00 38.47 2.87
65 66 7.228906 TCGGTGAGACCAAGTTAGATATAGAAG 59.771 40.741 0.00 0.00 38.47 2.85
66 67 7.058525 TCGGTGAGACCAAGTTAGATATAGAA 58.941 38.462 0.00 0.00 38.47 2.10
67 68 6.598503 TCGGTGAGACCAAGTTAGATATAGA 58.401 40.000 0.00 0.00 38.47 1.98
68 69 6.487331 ACTCGGTGAGACCAAGTTAGATATAG 59.513 42.308 0.00 0.00 38.47 1.31
69 70 6.363065 ACTCGGTGAGACCAAGTTAGATATA 58.637 40.000 0.00 0.00 38.47 0.86
70 71 5.202004 ACTCGGTGAGACCAAGTTAGATAT 58.798 41.667 0.00 0.00 38.47 1.63
71 72 4.597004 ACTCGGTGAGACCAAGTTAGATA 58.403 43.478 0.00 0.00 38.47 1.98
72 73 3.432378 ACTCGGTGAGACCAAGTTAGAT 58.568 45.455 0.00 0.00 38.47 1.98
73 74 2.818432 GACTCGGTGAGACCAAGTTAGA 59.182 50.000 0.00 0.00 38.47 2.10
74 75 2.557056 TGACTCGGTGAGACCAAGTTAG 59.443 50.000 0.00 0.00 38.47 2.34
75 76 2.589720 TGACTCGGTGAGACCAAGTTA 58.410 47.619 0.00 0.00 38.47 2.24
76 77 1.410004 TGACTCGGTGAGACCAAGTT 58.590 50.000 0.00 0.00 38.47 2.66
77 78 1.410004 TTGACTCGGTGAGACCAAGT 58.590 50.000 0.00 0.00 38.47 3.16
78 79 2.526304 TTTGACTCGGTGAGACCAAG 57.474 50.000 0.00 0.00 38.47 3.61
79 80 2.367241 TGATTTGACTCGGTGAGACCAA 59.633 45.455 0.00 2.24 38.47 3.67
80 81 1.967779 TGATTTGACTCGGTGAGACCA 59.032 47.619 0.00 0.00 38.47 4.02
81 82 2.737252 GTTGATTTGACTCGGTGAGACC 59.263 50.000 0.00 0.00 33.32 3.85
82 83 3.654414 AGTTGATTTGACTCGGTGAGAC 58.346 45.455 0.00 0.00 33.32 3.36
83 84 3.914312 GAGTTGATTTGACTCGGTGAGA 58.086 45.455 0.00 0.00 34.76 3.27
90 91 1.993370 CCGACCGAGTTGATTTGACTC 59.007 52.381 0.00 0.00 40.05 3.36
91 92 1.343465 ACCGACCGAGTTGATTTGACT 59.657 47.619 0.00 0.00 0.00 3.41
92 93 1.725164 GACCGACCGAGTTGATTTGAC 59.275 52.381 0.00 0.00 0.00 3.18
93 94 1.337447 GGACCGACCGAGTTGATTTGA 60.337 52.381 0.00 0.00 0.00 2.69
94 95 1.076332 GGACCGACCGAGTTGATTTG 58.924 55.000 0.00 0.00 0.00 2.32
95 96 3.527434 GGACCGACCGAGTTGATTT 57.473 52.632 0.00 0.00 0.00 2.17
105 106 0.036671 AGAACCATTTCGGACCGACC 60.037 55.000 18.12 0.17 38.63 4.79
106 107 1.076332 CAGAACCATTTCGGACCGAC 58.924 55.000 18.12 2.86 38.63 4.79
107 108 0.672401 GCAGAACCATTTCGGACCGA 60.672 55.000 13.88 13.88 38.63 4.69
108 109 0.953471 TGCAGAACCATTTCGGACCG 60.953 55.000 7.84 7.84 38.63 4.79
109 110 0.804989 CTGCAGAACCATTTCGGACC 59.195 55.000 8.42 0.00 38.63 4.46
110 111 0.169009 GCTGCAGAACCATTTCGGAC 59.831 55.000 20.43 0.00 38.63 4.79
111 112 0.036732 AGCTGCAGAACCATTTCGGA 59.963 50.000 20.43 0.00 38.63 4.55
112 113 0.883833 AAGCTGCAGAACCATTTCGG 59.116 50.000 20.43 0.00 42.50 4.30
113 114 1.808945 AGAAGCTGCAGAACCATTTCG 59.191 47.619 20.43 0.00 36.78 3.46
114 115 2.555757 ACAGAAGCTGCAGAACCATTTC 59.444 45.455 20.43 10.13 34.37 2.17
115 116 2.590821 ACAGAAGCTGCAGAACCATTT 58.409 42.857 20.43 0.72 34.37 2.32
116 117 2.283145 ACAGAAGCTGCAGAACCATT 57.717 45.000 20.43 2.96 34.37 3.16
117 118 2.283145 AACAGAAGCTGCAGAACCAT 57.717 45.000 20.43 0.00 34.37 3.55
118 119 1.949525 GAAACAGAAGCTGCAGAACCA 59.050 47.619 20.43 0.00 34.37 3.67
119 120 2.031333 CAGAAACAGAAGCTGCAGAACC 60.031 50.000 20.43 4.63 34.37 3.62
120 121 2.874701 TCAGAAACAGAAGCTGCAGAAC 59.125 45.455 20.43 7.52 34.37 3.01
121 122 3.198409 TCAGAAACAGAAGCTGCAGAA 57.802 42.857 20.43 0.00 34.37 3.02
122 123 2.916702 TCAGAAACAGAAGCTGCAGA 57.083 45.000 20.43 0.00 34.37 4.26
123 124 3.336468 AGATCAGAAACAGAAGCTGCAG 58.664 45.455 10.11 10.11 34.37 4.41
124 125 3.413846 AGATCAGAAACAGAAGCTGCA 57.586 42.857 1.02 0.00 34.37 4.41
125 126 6.434018 AATAAGATCAGAAACAGAAGCTGC 57.566 37.500 0.00 0.00 34.37 5.25
126 127 7.272948 GCAAAATAAGATCAGAAACAGAAGCTG 59.727 37.037 0.00 0.00 37.52 4.24
127 128 7.311408 GCAAAATAAGATCAGAAACAGAAGCT 58.689 34.615 0.00 0.00 0.00 3.74
128 129 6.529477 GGCAAAATAAGATCAGAAACAGAAGC 59.471 38.462 0.00 0.00 0.00 3.86
129 130 7.824672 AGGCAAAATAAGATCAGAAACAGAAG 58.175 34.615 0.00 0.00 0.00 2.85
130 131 7.765695 AGGCAAAATAAGATCAGAAACAGAA 57.234 32.000 0.00 0.00 0.00 3.02
131 132 7.448161 TGAAGGCAAAATAAGATCAGAAACAGA 59.552 33.333 0.00 0.00 0.00 3.41
132 133 7.540055 GTGAAGGCAAAATAAGATCAGAAACAG 59.460 37.037 0.00 0.00 0.00 3.16
133 134 7.014134 TGTGAAGGCAAAATAAGATCAGAAACA 59.986 33.333 0.00 0.00 0.00 2.83
134 135 7.370383 TGTGAAGGCAAAATAAGATCAGAAAC 58.630 34.615 0.00 0.00 0.00 2.78
135 136 7.523293 TGTGAAGGCAAAATAAGATCAGAAA 57.477 32.000 0.00 0.00 0.00 2.52
136 137 7.177216 ACATGTGAAGGCAAAATAAGATCAGAA 59.823 33.333 0.00 0.00 0.00 3.02
137 138 6.660521 ACATGTGAAGGCAAAATAAGATCAGA 59.339 34.615 0.00 0.00 0.00 3.27
138 139 6.860080 ACATGTGAAGGCAAAATAAGATCAG 58.140 36.000 0.00 0.00 0.00 2.90
139 140 6.839124 ACATGTGAAGGCAAAATAAGATCA 57.161 33.333 0.00 0.00 0.00 2.92
140 141 6.035327 GCAACATGTGAAGGCAAAATAAGATC 59.965 38.462 0.00 0.00 0.00 2.75
141 142 5.870978 GCAACATGTGAAGGCAAAATAAGAT 59.129 36.000 0.00 0.00 0.00 2.40
142 143 5.221402 TGCAACATGTGAAGGCAAAATAAGA 60.221 36.000 0.00 0.00 0.00 2.10
143 144 4.989797 TGCAACATGTGAAGGCAAAATAAG 59.010 37.500 0.00 0.00 0.00 1.73
144 145 4.953667 TGCAACATGTGAAGGCAAAATAA 58.046 34.783 0.00 0.00 0.00 1.40
145 146 4.597404 TGCAACATGTGAAGGCAAAATA 57.403 36.364 0.00 0.00 0.00 1.40
146 147 3.472283 TGCAACATGTGAAGGCAAAAT 57.528 38.095 0.00 0.00 0.00 1.82
147 148 2.975732 TGCAACATGTGAAGGCAAAA 57.024 40.000 0.00 0.00 0.00 2.44
148 149 3.611293 CGTATGCAACATGTGAAGGCAAA 60.611 43.478 15.63 0.00 38.08 3.68
149 150 2.095314 CGTATGCAACATGTGAAGGCAA 60.095 45.455 15.63 6.08 38.08 4.52
150 151 1.468127 CGTATGCAACATGTGAAGGCA 59.532 47.619 14.48 14.48 39.03 4.75
151 152 1.737236 TCGTATGCAACATGTGAAGGC 59.263 47.619 0.00 1.90 0.00 4.35
152 153 2.095853 GGTCGTATGCAACATGTGAAGG 59.904 50.000 0.00 0.00 0.00 3.46
153 154 3.002791 AGGTCGTATGCAACATGTGAAG 58.997 45.455 0.00 0.00 0.00 3.02
154 155 3.000041 GAGGTCGTATGCAACATGTGAA 59.000 45.455 0.00 0.00 0.00 3.18
155 156 2.616960 GAGGTCGTATGCAACATGTGA 58.383 47.619 0.00 0.00 0.00 3.58
156 157 1.324435 CGAGGTCGTATGCAACATGTG 59.676 52.381 0.00 0.00 34.11 3.21
157 158 1.640428 CGAGGTCGTATGCAACATGT 58.360 50.000 0.00 0.00 34.11 3.21
158 159 0.930310 CCGAGGTCGTATGCAACATG 59.070 55.000 0.00 0.00 37.74 3.21
159 160 0.821517 TCCGAGGTCGTATGCAACAT 59.178 50.000 0.00 0.00 37.74 2.71
160 161 0.821517 ATCCGAGGTCGTATGCAACA 59.178 50.000 0.00 0.00 37.74 3.33
161 162 1.935933 AATCCGAGGTCGTATGCAAC 58.064 50.000 0.00 0.00 37.74 4.17
162 163 3.382227 TCTTAATCCGAGGTCGTATGCAA 59.618 43.478 0.00 0.00 37.74 4.08
163 164 2.953648 TCTTAATCCGAGGTCGTATGCA 59.046 45.455 0.00 0.00 37.74 3.96
164 165 3.243301 TGTCTTAATCCGAGGTCGTATGC 60.243 47.826 0.00 0.00 37.74 3.14
165 166 4.036498 AGTGTCTTAATCCGAGGTCGTATG 59.964 45.833 0.00 0.00 37.74 2.39
166 167 4.205587 AGTGTCTTAATCCGAGGTCGTAT 58.794 43.478 0.00 0.00 37.74 3.06
167 168 3.614092 AGTGTCTTAATCCGAGGTCGTA 58.386 45.455 0.00 0.00 37.74 3.43
168 169 2.444421 AGTGTCTTAATCCGAGGTCGT 58.556 47.619 0.00 0.00 37.74 4.34
169 170 3.505464 AAGTGTCTTAATCCGAGGTCG 57.495 47.619 0.00 0.00 39.44 4.79
170 171 7.845066 ATAAAAAGTGTCTTAATCCGAGGTC 57.155 36.000 0.00 0.00 0.00 3.85
171 172 9.543783 GATATAAAAAGTGTCTTAATCCGAGGT 57.456 33.333 0.00 0.00 0.00 3.85
172 173 9.542462 TGATATAAAAAGTGTCTTAATCCGAGG 57.458 33.333 0.00 0.00 0.00 4.63
182 183 8.504005 CGGTTGAGTTTGATATAAAAAGTGTCT 58.496 33.333 0.00 0.00 0.00 3.41
183 184 8.287503 ACGGTTGAGTTTGATATAAAAAGTGTC 58.712 33.333 0.00 0.00 0.00 3.67
184 185 8.161699 ACGGTTGAGTTTGATATAAAAAGTGT 57.838 30.769 0.00 0.00 0.00 3.55
185 186 9.458374 AAACGGTTGAGTTTGATATAAAAAGTG 57.542 29.630 0.00 0.00 42.12 3.16
186 187 9.673454 GAAACGGTTGAGTTTGATATAAAAAGT 57.327 29.630 0.00 0.00 43.54 2.66
187 188 9.672086 TGAAACGGTTGAGTTTGATATAAAAAG 57.328 29.630 0.00 0.00 43.54 2.27
189 190 9.453325 GTTGAAACGGTTGAGTTTGATATAAAA 57.547 29.630 0.00 0.00 43.54 1.52
208 209 3.781341 TGTTATGCGTCTCGTTGAAAC 57.219 42.857 0.00 0.00 0.00 2.78
209 210 4.449405 TGAATGTTATGCGTCTCGTTGAAA 59.551 37.500 0.00 0.00 0.00 2.69
210 211 3.991121 TGAATGTTATGCGTCTCGTTGAA 59.009 39.130 0.00 0.00 0.00 2.69
211 212 3.580731 TGAATGTTATGCGTCTCGTTGA 58.419 40.909 0.00 0.00 0.00 3.18
212 213 3.989705 TGAATGTTATGCGTCTCGTTG 57.010 42.857 0.00 0.00 0.00 4.10
213 214 3.932710 ACATGAATGTTATGCGTCTCGTT 59.067 39.130 0.00 0.00 37.90 3.85
214 215 3.521560 ACATGAATGTTATGCGTCTCGT 58.478 40.909 0.00 0.00 37.90 4.18
233 234 5.509501 GCCTCTGATGGAAAATGTTTCAACA 60.510 40.000 3.35 0.00 44.06 3.33
234 235 4.925646 GCCTCTGATGGAAAATGTTTCAAC 59.074 41.667 3.35 0.00 0.00 3.18
235 236 4.021192 GGCCTCTGATGGAAAATGTTTCAA 60.021 41.667 0.00 0.00 0.00 2.69
236 237 3.511146 GGCCTCTGATGGAAAATGTTTCA 59.489 43.478 0.00 0.00 0.00 2.69
237 238 3.511146 TGGCCTCTGATGGAAAATGTTTC 59.489 43.478 3.32 0.00 0.00 2.78
238 239 3.509442 TGGCCTCTGATGGAAAATGTTT 58.491 40.909 3.32 0.00 0.00 2.83
239 240 3.173953 TGGCCTCTGATGGAAAATGTT 57.826 42.857 3.32 0.00 0.00 2.71
240 241 2.905415 TGGCCTCTGATGGAAAATGT 57.095 45.000 3.32 0.00 0.00 2.71
241 242 7.528996 TTAATATGGCCTCTGATGGAAAATG 57.471 36.000 3.32 0.00 0.00 2.32
242 243 8.591072 CAATTAATATGGCCTCTGATGGAAAAT 58.409 33.333 3.32 0.00 0.00 1.82
243 244 7.784073 TCAATTAATATGGCCTCTGATGGAAAA 59.216 33.333 3.32 0.00 0.00 2.29
244 245 7.296856 TCAATTAATATGGCCTCTGATGGAAA 58.703 34.615 3.32 0.00 0.00 3.13
245 246 6.851318 TCAATTAATATGGCCTCTGATGGAA 58.149 36.000 3.32 0.00 0.00 3.53
246 247 6.044754 ACTCAATTAATATGGCCTCTGATGGA 59.955 38.462 3.32 0.00 0.00 3.41
247 248 6.243900 ACTCAATTAATATGGCCTCTGATGG 58.756 40.000 3.32 0.00 0.00 3.51
248 249 7.756395 AACTCAATTAATATGGCCTCTGATG 57.244 36.000 3.32 0.00 0.00 3.07
249 250 8.000709 TGAAACTCAATTAATATGGCCTCTGAT 58.999 33.333 3.32 0.00 0.00 2.90
250 251 7.345691 TGAAACTCAATTAATATGGCCTCTGA 58.654 34.615 3.32 0.00 0.00 3.27
251 252 7.572523 TGAAACTCAATTAATATGGCCTCTG 57.427 36.000 3.32 0.00 0.00 3.35
252 253 7.781693 ACATGAAACTCAATTAATATGGCCTCT 59.218 33.333 3.32 0.00 0.00 3.69
253 254 7.945134 ACATGAAACTCAATTAATATGGCCTC 58.055 34.615 3.32 0.00 0.00 4.70
254 255 7.560991 TGACATGAAACTCAATTAATATGGCCT 59.439 33.333 3.32 0.00 0.00 5.19
255 256 7.715657 TGACATGAAACTCAATTAATATGGCC 58.284 34.615 0.00 0.00 0.00 5.36
256 257 9.754382 AATGACATGAAACTCAATTAATATGGC 57.246 29.630 0.00 0.00 0.00 4.40
267 268 8.733458 CCAGATTAAAGAATGACATGAAACTCA 58.267 33.333 0.00 0.00 0.00 3.41
268 269 8.734386 ACCAGATTAAAGAATGACATGAAACTC 58.266 33.333 0.00 0.00 0.00 3.01
269 270 8.517878 CACCAGATTAAAGAATGACATGAAACT 58.482 33.333 0.00 0.00 0.00 2.66
270 271 8.299570 ACACCAGATTAAAGAATGACATGAAAC 58.700 33.333 0.00 0.00 0.00 2.78
271 272 8.408043 ACACCAGATTAAAGAATGACATGAAA 57.592 30.769 0.00 0.00 0.00 2.69
272 273 7.665145 TGACACCAGATTAAAGAATGACATGAA 59.335 33.333 0.00 0.00 0.00 2.57
273 274 7.167535 TGACACCAGATTAAAGAATGACATGA 58.832 34.615 0.00 0.00 0.00 3.07
274 275 7.381766 TGACACCAGATTAAAGAATGACATG 57.618 36.000 0.00 0.00 0.00 3.21
275 276 6.094603 GCTGACACCAGATTAAAGAATGACAT 59.905 38.462 0.00 0.00 43.02 3.06
276 277 5.412594 GCTGACACCAGATTAAAGAATGACA 59.587 40.000 0.00 0.00 43.02 3.58
277 278 5.412594 TGCTGACACCAGATTAAAGAATGAC 59.587 40.000 0.00 0.00 43.02 3.06
278 279 5.559770 TGCTGACACCAGATTAAAGAATGA 58.440 37.500 0.00 0.00 43.02 2.57
279 280 5.885230 TGCTGACACCAGATTAAAGAATG 57.115 39.130 0.00 0.00 43.02 2.67
280 281 6.182627 TCATGCTGACACCAGATTAAAGAAT 58.817 36.000 0.00 0.00 43.02 2.40
281 282 5.559770 TCATGCTGACACCAGATTAAAGAA 58.440 37.500 0.00 0.00 43.02 2.52
282 283 5.164620 TCATGCTGACACCAGATTAAAGA 57.835 39.130 0.00 0.00 43.02 2.52
283 284 4.201891 GCTCATGCTGACACCAGATTAAAG 60.202 45.833 0.00 0.00 43.02 1.85
284 285 3.691118 GCTCATGCTGACACCAGATTAAA 59.309 43.478 0.00 0.00 43.02 1.52
285 286 3.273434 GCTCATGCTGACACCAGATTAA 58.727 45.455 0.00 0.00 43.02 1.40
286 287 2.236893 TGCTCATGCTGACACCAGATTA 59.763 45.455 0.00 0.00 43.02 1.75
287 288 1.003928 TGCTCATGCTGACACCAGATT 59.996 47.619 0.00 0.00 43.02 2.40
288 289 0.616891 TGCTCATGCTGACACCAGAT 59.383 50.000 0.00 0.00 43.02 2.90
289 290 0.616891 ATGCTCATGCTGACACCAGA 59.383 50.000 0.00 0.00 43.02 3.86
290 291 1.015109 GATGCTCATGCTGACACCAG 58.985 55.000 0.00 0.00 43.22 4.00
291 292 0.616891 AGATGCTCATGCTGACACCA 59.383 50.000 0.00 0.00 40.48 4.17
292 293 1.134461 AGAGATGCTCATGCTGACACC 60.134 52.381 0.00 0.00 40.48 4.16
293 294 1.934525 CAGAGATGCTCATGCTGACAC 59.065 52.381 0.00 0.00 40.48 3.67
294 295 1.829222 TCAGAGATGCTCATGCTGACA 59.171 47.619 7.51 0.00 40.48 3.58
295 296 2.598686 TCAGAGATGCTCATGCTGAC 57.401 50.000 7.51 0.00 40.48 3.51
296 297 2.500504 AGTTCAGAGATGCTCATGCTGA 59.499 45.455 7.51 7.51 40.48 4.26
297 298 2.907634 AGTTCAGAGATGCTCATGCTG 58.092 47.619 0.00 0.00 40.48 4.41
298 299 3.271729 CAAGTTCAGAGATGCTCATGCT 58.728 45.455 0.00 0.00 40.48 3.79
299 300 3.008330 ACAAGTTCAGAGATGCTCATGC 58.992 45.455 0.00 0.00 40.20 4.06
300 301 4.251268 TGACAAGTTCAGAGATGCTCATG 58.749 43.478 0.00 0.00 32.06 3.07
301 302 4.548451 TGACAAGTTCAGAGATGCTCAT 57.452 40.909 0.00 0.00 32.06 2.90
302 303 4.548451 ATGACAAGTTCAGAGATGCTCA 57.452 40.909 0.00 0.00 37.77 4.26
303 304 6.105333 AGTTATGACAAGTTCAGAGATGCTC 58.895 40.000 0.00 0.00 37.77 4.26
304 305 6.047511 AGTTATGACAAGTTCAGAGATGCT 57.952 37.500 0.00 0.00 37.77 3.79
305 306 6.734104 AAGTTATGACAAGTTCAGAGATGC 57.266 37.500 0.00 0.00 37.77 3.91
306 307 7.536622 GCAAAAGTTATGACAAGTTCAGAGATG 59.463 37.037 0.00 0.00 37.77 2.90
307 308 7.229306 TGCAAAAGTTATGACAAGTTCAGAGAT 59.771 33.333 0.00 0.00 37.77 2.75
308 309 6.542005 TGCAAAAGTTATGACAAGTTCAGAGA 59.458 34.615 0.00 0.00 37.77 3.10
309 310 6.728200 TGCAAAAGTTATGACAAGTTCAGAG 58.272 36.000 0.00 0.00 37.77 3.35
310 311 6.691754 TGCAAAAGTTATGACAAGTTCAGA 57.308 33.333 0.00 0.00 37.77 3.27
311 312 6.583806 GGATGCAAAAGTTATGACAAGTTCAG 59.416 38.462 0.00 0.00 37.77 3.02
312 313 6.040278 TGGATGCAAAAGTTATGACAAGTTCA 59.960 34.615 0.00 0.00 39.11 3.18
313 314 6.446318 TGGATGCAAAAGTTATGACAAGTTC 58.554 36.000 0.00 0.00 0.00 3.01
314 315 6.403866 TGGATGCAAAAGTTATGACAAGTT 57.596 33.333 0.00 0.00 0.00 2.66
315 316 6.040842 ACTTGGATGCAAAAGTTATGACAAGT 59.959 34.615 0.00 0.00 39.69 3.16
316 317 6.449698 ACTTGGATGCAAAAGTTATGACAAG 58.550 36.000 0.00 0.00 32.75 3.16
317 318 6.403866 ACTTGGATGCAAAAGTTATGACAA 57.596 33.333 0.00 0.00 32.75 3.18
318 319 6.265196 AGAACTTGGATGCAAAAGTTATGACA 59.735 34.615 19.52 0.00 44.53 3.58
319 320 6.681777 AGAACTTGGATGCAAAAGTTATGAC 58.318 36.000 19.52 11.06 44.53 3.06
320 321 6.899393 AGAACTTGGATGCAAAAGTTATGA 57.101 33.333 19.52 0.00 44.53 2.15
321 322 6.939551 CAGAACTTGGATGCAAAAGTTATG 57.060 37.500 22.28 22.28 44.53 1.90
322 323 6.655078 ACAGAACTTGGATGCAAAAGTTAT 57.345 33.333 19.52 15.77 44.53 1.89
323 324 6.463995 AACAGAACTTGGATGCAAAAGTTA 57.536 33.333 19.52 0.00 44.53 2.24
324 325 5.343307 AACAGAACTTGGATGCAAAAGTT 57.657 34.783 19.56 19.56 46.56 2.66
325 326 5.343307 AAACAGAACTTGGATGCAAAAGT 57.657 34.783 0.00 6.91 38.25 2.66
326 327 7.168135 GTCTAAAACAGAACTTGGATGCAAAAG 59.832 37.037 0.00 0.00 34.17 2.27
327 328 6.978080 GTCTAAAACAGAACTTGGATGCAAAA 59.022 34.615 0.00 0.00 34.17 2.44
328 329 6.460953 GGTCTAAAACAGAACTTGGATGCAAA 60.461 38.462 0.00 0.00 38.04 3.68
329 330 5.009610 GGTCTAAAACAGAACTTGGATGCAA 59.990 40.000 0.00 0.00 38.04 4.08
330 331 4.518970 GGTCTAAAACAGAACTTGGATGCA 59.481 41.667 0.00 0.00 38.04 3.96
331 332 4.518970 TGGTCTAAAACAGAACTTGGATGC 59.481 41.667 0.00 0.00 42.02 3.91
332 333 6.430925 TGATGGTCTAAAACAGAACTTGGATG 59.569 38.462 0.00 0.00 42.02 3.51
333 334 6.542821 TGATGGTCTAAAACAGAACTTGGAT 58.457 36.000 0.00 0.00 42.02 3.41
334 335 5.935945 TGATGGTCTAAAACAGAACTTGGA 58.064 37.500 0.00 0.00 42.02 3.53
335 336 6.039270 TGTTGATGGTCTAAAACAGAACTTGG 59.961 38.462 0.00 0.00 42.02 3.61
336 337 7.026631 TGTTGATGGTCTAAAACAGAACTTG 57.973 36.000 0.00 0.00 42.02 3.16
337 338 7.823745 ATGTTGATGGTCTAAAACAGAACTT 57.176 32.000 0.00 0.00 42.02 2.66
338 339 9.167311 GATATGTTGATGGTCTAAAACAGAACT 57.833 33.333 0.00 0.00 42.02 3.01
339 340 8.398665 GGATATGTTGATGGTCTAAAACAGAAC 58.601 37.037 0.00 0.00 41.84 3.01
340 341 7.279981 CGGATATGTTGATGGTCTAAAACAGAA 59.720 37.037 0.00 0.00 36.09 3.02
341 342 6.761242 CGGATATGTTGATGGTCTAAAACAGA 59.239 38.462 0.00 0.00 36.09 3.41
342 343 6.538742 ACGGATATGTTGATGGTCTAAAACAG 59.461 38.462 0.00 0.00 36.09 3.16
343 344 6.411376 ACGGATATGTTGATGGTCTAAAACA 58.589 36.000 0.00 0.00 36.98 2.83
344 345 6.920569 ACGGATATGTTGATGGTCTAAAAC 57.079 37.500 0.00 0.00 0.00 2.43
345 346 7.931578 AAACGGATATGTTGATGGTCTAAAA 57.068 32.000 0.00 0.00 31.10 1.52
346 347 7.608376 TCAAAACGGATATGTTGATGGTCTAAA 59.392 33.333 0.00 0.00 31.10 1.85
347 348 7.106890 TCAAAACGGATATGTTGATGGTCTAA 58.893 34.615 0.00 0.00 31.10 2.10
348 349 6.645306 TCAAAACGGATATGTTGATGGTCTA 58.355 36.000 0.00 0.00 31.10 2.59
349 350 5.496556 TCAAAACGGATATGTTGATGGTCT 58.503 37.500 0.00 0.00 31.10 3.85
350 351 5.811399 TCAAAACGGATATGTTGATGGTC 57.189 39.130 0.00 0.00 31.10 4.02
351 352 6.122277 AGATCAAAACGGATATGTTGATGGT 58.878 36.000 2.66 0.00 40.03 3.55
352 353 6.624352 AGATCAAAACGGATATGTTGATGG 57.376 37.500 2.66 0.00 40.03 3.51
353 354 7.923888 AGAAGATCAAAACGGATATGTTGATG 58.076 34.615 2.66 0.00 40.03 3.07
354 355 8.400947 CAAGAAGATCAAAACGGATATGTTGAT 58.599 33.333 0.00 0.00 42.05 2.57
355 356 7.606073 TCAAGAAGATCAAAACGGATATGTTGA 59.394 33.333 0.00 0.00 34.68 3.18
356 357 7.751732 TCAAGAAGATCAAAACGGATATGTTG 58.248 34.615 0.00 0.00 31.10 3.33
357 358 7.921786 TCAAGAAGATCAAAACGGATATGTT 57.078 32.000 0.00 0.00 0.00 2.71
358 359 7.824289 TCTTCAAGAAGATCAAAACGGATATGT 59.176 33.333 8.37 0.00 42.06 2.29
359 360 8.201554 TCTTCAAGAAGATCAAAACGGATATG 57.798 34.615 8.37 0.00 42.06 1.78
360 361 8.260818 TCTCTTCAAGAAGATCAAAACGGATAT 58.739 33.333 12.50 0.00 45.40 1.63
361 362 7.611770 TCTCTTCAAGAAGATCAAAACGGATA 58.388 34.615 12.50 0.00 45.40 2.59
362 363 6.467677 TCTCTTCAAGAAGATCAAAACGGAT 58.532 36.000 12.50 0.00 45.40 4.18
363 364 5.853936 TCTCTTCAAGAAGATCAAAACGGA 58.146 37.500 12.50 2.27 45.40 4.69
364 365 5.390356 GCTCTCTTCAAGAAGATCAAAACGG 60.390 44.000 12.50 0.06 45.40 4.44
365 366 5.390356 GGCTCTCTTCAAGAAGATCAAAACG 60.390 44.000 12.50 0.71 45.40 3.60
366 367 5.471456 TGGCTCTCTTCAAGAAGATCAAAAC 59.529 40.000 12.50 3.59 45.40 2.43
367 368 5.624159 TGGCTCTCTTCAAGAAGATCAAAA 58.376 37.500 12.50 0.00 45.40 2.44
368 369 5.233083 TGGCTCTCTTCAAGAAGATCAAA 57.767 39.130 12.50 0.10 45.40 2.69
369 370 4.897509 TGGCTCTCTTCAAGAAGATCAA 57.102 40.909 12.50 2.23 45.40 2.57
370 371 5.426504 GAATGGCTCTCTTCAAGAAGATCA 58.573 41.667 12.50 9.40 45.40 2.92
371 372 4.815846 GGAATGGCTCTCTTCAAGAAGATC 59.184 45.833 12.50 6.01 45.40 2.75
372 373 4.226846 TGGAATGGCTCTCTTCAAGAAGAT 59.773 41.667 12.50 0.00 45.40 2.40
373 374 3.584406 TGGAATGGCTCTCTTCAAGAAGA 59.416 43.478 11.66 11.66 44.47 2.87
374 375 3.947868 TGGAATGGCTCTCTTCAAGAAG 58.052 45.455 3.43 3.43 39.71 2.85
375 376 4.019051 TCATGGAATGGCTCTCTTCAAGAA 60.019 41.667 0.00 0.00 46.73 2.52
376 377 3.520721 TCATGGAATGGCTCTCTTCAAGA 59.479 43.478 0.00 0.00 46.73 3.02
377 378 3.882444 TCATGGAATGGCTCTCTTCAAG 58.118 45.455 0.00 0.00 46.73 3.02
378 379 4.080186 TCATCATGGAATGGCTCTCTTCAA 60.080 41.667 0.00 0.00 46.73 2.69
379 380 3.457012 TCATCATGGAATGGCTCTCTTCA 59.543 43.478 0.00 0.00 46.73 3.02
380 381 3.814283 GTCATCATGGAATGGCTCTCTTC 59.186 47.826 0.00 0.00 46.73 2.87
381 382 3.458857 AGTCATCATGGAATGGCTCTCTT 59.541 43.478 0.00 0.00 46.73 2.85
382 383 3.047115 AGTCATCATGGAATGGCTCTCT 58.953 45.455 0.00 0.00 46.73 3.10
383 384 3.488778 AGTCATCATGGAATGGCTCTC 57.511 47.619 0.00 0.00 46.73 3.20
384 385 3.947612 AAGTCATCATGGAATGGCTCT 57.052 42.857 2.29 0.00 46.73 4.09
385 386 3.949754 TGAAAGTCATCATGGAATGGCTC 59.050 43.478 2.29 0.00 46.73 4.70
386 387 3.952323 CTGAAAGTCATCATGGAATGGCT 59.048 43.478 0.00 0.00 46.73 4.75
387 388 4.303086 CTGAAAGTCATCATGGAATGGC 57.697 45.455 0.00 0.00 46.73 4.40
403 404 9.897744 CAAGCTAATTCAAACTTATGACTGAAA 57.102 29.630 0.00 0.00 31.94 2.69
404 405 9.283768 TCAAGCTAATTCAAACTTATGACTGAA 57.716 29.630 0.00 0.00 32.67 3.02
405 406 8.721478 GTCAAGCTAATTCAAACTTATGACTGA 58.279 33.333 0.00 0.00 0.00 3.41
406 407 8.506437 TGTCAAGCTAATTCAAACTTATGACTG 58.494 33.333 7.59 0.00 0.00 3.51
407 408 8.621532 TGTCAAGCTAATTCAAACTTATGACT 57.378 30.769 7.59 0.00 0.00 3.41
410 411 9.443283 GCTATGTCAAGCTAATTCAAACTTATG 57.557 33.333 0.00 0.00 39.50 1.90
425 426 5.302357 AGTTGCTAAAAGCTATGTCAAGC 57.698 39.130 0.03 0.00 42.97 4.01
426 427 9.118236 GTAAAAGTTGCTAAAAGCTATGTCAAG 57.882 33.333 0.03 0.00 42.97 3.02
427 428 7.801315 CGTAAAAGTTGCTAAAAGCTATGTCAA 59.199 33.333 0.03 0.00 42.97 3.18
428 429 7.171848 TCGTAAAAGTTGCTAAAAGCTATGTCA 59.828 33.333 0.03 0.00 42.97 3.58
429 430 7.515643 TCGTAAAAGTTGCTAAAAGCTATGTC 58.484 34.615 0.03 0.00 42.97 3.06
430 431 7.429636 TCGTAAAAGTTGCTAAAAGCTATGT 57.570 32.000 0.03 0.00 42.97 2.29
431 432 8.788813 CAATCGTAAAAGTTGCTAAAAGCTATG 58.211 33.333 0.03 0.00 42.97 2.23
432 433 8.512138 ACAATCGTAAAAGTTGCTAAAAGCTAT 58.488 29.630 0.03 0.00 42.97 2.97
433 434 7.801315 CACAATCGTAAAAGTTGCTAAAAGCTA 59.199 33.333 0.03 0.00 42.97 3.32
434 435 6.636850 CACAATCGTAAAAGTTGCTAAAAGCT 59.363 34.615 0.03 0.00 42.97 3.74
435 436 6.416750 ACACAATCGTAAAAGTTGCTAAAAGC 59.583 34.615 0.00 0.00 42.82 3.51
436 437 7.642194 TGACACAATCGTAAAAGTTGCTAAAAG 59.358 33.333 0.00 0.00 0.00 2.27
437 438 7.429920 GTGACACAATCGTAAAAGTTGCTAAAA 59.570 33.333 0.00 0.00 0.00 1.52
438 439 6.908284 GTGACACAATCGTAAAAGTTGCTAAA 59.092 34.615 0.00 0.00 0.00 1.85
439 440 6.259167 AGTGACACAATCGTAAAAGTTGCTAA 59.741 34.615 8.59 0.00 0.00 3.09
440 441 5.756347 AGTGACACAATCGTAAAAGTTGCTA 59.244 36.000 8.59 0.00 0.00 3.49
441 442 4.574828 AGTGACACAATCGTAAAAGTTGCT 59.425 37.500 8.59 0.00 0.00 3.91
442 443 4.844267 AGTGACACAATCGTAAAAGTTGC 58.156 39.130 8.59 0.00 0.00 4.17
443 444 7.734538 AAAAGTGACACAATCGTAAAAGTTG 57.265 32.000 8.59 0.00 0.00 3.16
444 445 9.498307 CTTAAAAGTGACACAATCGTAAAAGTT 57.502 29.630 8.59 0.00 0.00 2.66
445 446 8.671028 ACTTAAAAGTGACACAATCGTAAAAGT 58.329 29.630 8.59 3.87 37.98 2.66
462 463 6.767524 TCCACAATGTTGACACTTAAAAGT 57.232 33.333 0.00 0.00 40.60 2.66
463 464 6.196353 CGTTCCACAATGTTGACACTTAAAAG 59.804 38.462 0.00 0.00 0.00 2.27
464 465 6.030849 CGTTCCACAATGTTGACACTTAAAA 58.969 36.000 0.00 0.00 0.00 1.52
465 466 5.354513 TCGTTCCACAATGTTGACACTTAAA 59.645 36.000 0.00 0.00 0.00 1.52
466 467 4.876679 TCGTTCCACAATGTTGACACTTAA 59.123 37.500 0.00 0.00 0.00 1.85
467 468 4.271533 GTCGTTCCACAATGTTGACACTTA 59.728 41.667 0.00 0.00 0.00 2.24
468 469 3.064820 GTCGTTCCACAATGTTGACACTT 59.935 43.478 0.00 0.00 0.00 3.16
469 470 2.612212 GTCGTTCCACAATGTTGACACT 59.388 45.455 0.00 0.00 0.00 3.55
470 471 2.598907 CGTCGTTCCACAATGTTGACAC 60.599 50.000 0.00 0.00 0.00 3.67
471 472 1.595328 CGTCGTTCCACAATGTTGACA 59.405 47.619 0.00 0.00 0.00 3.58
472 473 1.862201 TCGTCGTTCCACAATGTTGAC 59.138 47.619 0.00 0.00 0.00 3.18
473 474 2.226602 TCGTCGTTCCACAATGTTGA 57.773 45.000 0.00 0.00 0.00 3.18
474 475 2.736721 AGATCGTCGTTCCACAATGTTG 59.263 45.455 0.00 0.00 0.00 3.33
475 476 2.993899 GAGATCGTCGTTCCACAATGTT 59.006 45.455 0.00 0.00 0.00 2.71
476 477 2.607187 GAGATCGTCGTTCCACAATGT 58.393 47.619 0.00 0.00 0.00 2.71
477 478 1.927174 GGAGATCGTCGTTCCACAATG 59.073 52.381 0.00 0.00 0.00 2.82
478 479 1.825474 AGGAGATCGTCGTTCCACAAT 59.175 47.619 13.05 0.00 33.32 2.71
479 480 1.254026 AGGAGATCGTCGTTCCACAA 58.746 50.000 13.05 0.00 33.32 3.33
480 481 1.254026 AAGGAGATCGTCGTTCCACA 58.746 50.000 13.05 0.00 33.32 4.17
481 482 2.365408 AAAGGAGATCGTCGTTCCAC 57.635 50.000 13.05 2.62 31.92 4.02
482 483 3.323243 GAAAAAGGAGATCGTCGTTCCA 58.677 45.455 13.05 0.00 31.92 3.53
483 484 2.344741 CGAAAAAGGAGATCGTCGTTCC 59.655 50.000 0.00 2.96 31.92 3.62
484 485 2.222530 GCGAAAAAGGAGATCGTCGTTC 60.223 50.000 0.00 0.00 38.75 3.95
485 486 1.725164 GCGAAAAAGGAGATCGTCGTT 59.275 47.619 0.00 0.00 38.75 3.85
486 487 1.347320 GCGAAAAAGGAGATCGTCGT 58.653 50.000 0.00 0.00 38.75 4.34
487 488 0.294887 CGCGAAAAAGGAGATCGTCG 59.705 55.000 0.00 0.00 38.75 5.12
488 489 1.347320 ACGCGAAAAAGGAGATCGTC 58.653 50.000 15.93 0.00 38.75 4.20
489 490 2.642139 TACGCGAAAAAGGAGATCGT 57.358 45.000 15.93 0.00 38.75 3.73
490 491 3.372954 AGATACGCGAAAAAGGAGATCG 58.627 45.455 15.93 0.00 39.47 3.69
491 492 3.736759 GGAGATACGCGAAAAAGGAGATC 59.263 47.826 15.93 1.16 0.00 2.75
492 493 3.385111 AGGAGATACGCGAAAAAGGAGAT 59.615 43.478 15.93 0.00 0.00 2.75
493 494 2.758979 AGGAGATACGCGAAAAAGGAGA 59.241 45.455 15.93 0.00 0.00 3.71
494 495 3.166489 AGGAGATACGCGAAAAAGGAG 57.834 47.619 15.93 0.00 0.00 3.69
495 496 3.259064 CAAGGAGATACGCGAAAAAGGA 58.741 45.455 15.93 0.00 0.00 3.36
496 497 3.000727 ACAAGGAGATACGCGAAAAAGG 58.999 45.455 15.93 0.00 0.00 3.11
497 498 3.062234 GGACAAGGAGATACGCGAAAAAG 59.938 47.826 15.93 0.00 0.00 2.27
498 499 2.997986 GGACAAGGAGATACGCGAAAAA 59.002 45.455 15.93 0.00 0.00 1.94
499 500 2.613691 GGACAAGGAGATACGCGAAAA 58.386 47.619 15.93 0.00 0.00 2.29
500 501 1.468565 CGGACAAGGAGATACGCGAAA 60.469 52.381 15.93 0.00 0.00 3.46
501 502 0.099968 CGGACAAGGAGATACGCGAA 59.900 55.000 15.93 0.00 0.00 4.70
502 503 1.725665 CGGACAAGGAGATACGCGA 59.274 57.895 15.93 0.00 0.00 5.87
503 504 1.944676 GCGGACAAGGAGATACGCG 60.945 63.158 3.53 3.53 37.60 6.01
504 505 1.591863 GGCGGACAAGGAGATACGC 60.592 63.158 0.00 0.00 45.53 4.42
505 506 1.067582 GGGCGGACAAGGAGATACG 59.932 63.158 0.00 0.00 0.00 3.06
506 507 1.067582 CGGGCGGACAAGGAGATAC 59.932 63.158 0.00 0.00 0.00 2.24
507 508 1.380785 ACGGGCGGACAAGGAGATA 60.381 57.895 0.00 0.00 0.00 1.98
514 515 4.164087 ACACACACGGGCGGACAA 62.164 61.111 0.00 0.00 0.00 3.18
517 518 4.595538 GACACACACACGGGCGGA 62.596 66.667 0.00 0.00 0.00 5.54
522 523 0.310543 CCATTTGGACACACACACGG 59.689 55.000 0.00 0.00 37.39 4.94
526 527 1.539827 GCTACCCATTTGGACACACAC 59.460 52.381 0.00 0.00 37.39 3.82
528 529 1.539827 GTGCTACCCATTTGGACACAC 59.460 52.381 0.00 0.00 36.57 3.82
529 530 1.546773 GGTGCTACCCATTTGGACACA 60.547 52.381 0.00 0.00 37.56 3.72
535 536 1.468520 CTCAACGGTGCTACCCATTTG 59.531 52.381 0.00 0.00 33.75 2.32
563 564 1.154150 GCAAACATGCGTCTCCAGC 60.154 57.895 0.00 0.00 0.00 4.85
565 566 1.971167 GGGCAAACATGCGTCTCCA 60.971 57.895 0.00 0.00 35.24 3.86
569 570 2.175811 GACGGGCAAACATGCGTC 59.824 61.111 5.71 5.71 35.24 5.19
572 573 2.258286 GTGGACGGGCAAACATGC 59.742 61.111 0.00 0.00 0.00 4.06
613 616 3.541711 CAAACGGACACGAAAGATGTTC 58.458 45.455 0.00 0.00 44.60 3.18
614 617 2.289547 CCAAACGGACACGAAAGATGTT 59.710 45.455 0.00 0.00 44.60 2.71
619 622 0.584876 GACCCAAACGGACACGAAAG 59.415 55.000 0.00 0.00 44.60 2.62
641 644 1.302993 TAAGGGCAACTCCAACCGC 60.303 57.895 0.00 0.00 36.21 5.68
642 645 1.296056 CGTAAGGGCAACTCCAACCG 61.296 60.000 0.00 0.00 36.21 4.44
666 674 0.728466 GACCACGAGGAGAAACGACG 60.728 60.000 5.68 0.00 38.69 5.12
673 681 2.596338 TGCACGACCACGAGGAGA 60.596 61.111 5.68 0.00 42.66 3.71
679 687 3.705638 CTGCACTGCACGACCACG 61.706 66.667 0.00 0.00 45.75 4.94
698 707 3.081061 AGCTCACAAAAACACTGTGACA 58.919 40.909 15.86 0.00 46.30 3.58
712 721 3.610040 ACATGAATTACGGAGCTCACA 57.390 42.857 17.19 4.10 0.00 3.58
724 733 6.292328 CGATATACACTCGCACAACATGAATT 60.292 38.462 0.00 0.00 0.00 2.17
728 737 3.796717 ACGATATACACTCGCACAACATG 59.203 43.478 0.00 0.00 39.71 3.21
736 745 3.364023 GCATAACCACGATATACACTCGC 59.636 47.826 0.00 0.00 39.71 5.03
741 750 3.659786 GCCTGCATAACCACGATATACA 58.340 45.455 0.00 0.00 0.00 2.29
851 860 8.694975 ATACAACAGAATGAAGCGCTATATAG 57.305 34.615 12.05 5.30 39.69 1.31
874 883 3.487372 CCGTGTAGGGATCAGACTGATA 58.513 50.000 17.96 0.00 37.20 2.15
887 896 1.334869 GTCCGTGTATACCCGTGTAGG 59.665 57.143 6.99 0.00 40.63 3.18
889 898 2.418368 AGTCCGTGTATACCCGTGTA 57.582 50.000 6.99 0.00 0.00 2.90
920 934 9.058174 TGAGAAGTCCGTGTATTATTTCAAAAA 57.942 29.630 0.00 0.00 0.00 1.94
921 935 8.610248 TGAGAAGTCCGTGTATTATTTCAAAA 57.390 30.769 0.00 0.00 0.00 2.44
922 936 8.786826 ATGAGAAGTCCGTGTATTATTTCAAA 57.213 30.769 0.00 0.00 0.00 2.69
924 938 8.038351 TCAATGAGAAGTCCGTGTATTATTTCA 58.962 33.333 0.00 0.00 0.00 2.69
925 939 8.420374 TCAATGAGAAGTCCGTGTATTATTTC 57.580 34.615 0.00 0.00 0.00 2.17
926 940 8.964476 ATCAATGAGAAGTCCGTGTATTATTT 57.036 30.769 0.00 0.00 0.00 1.40
927 941 8.830580 CAATCAATGAGAAGTCCGTGTATTATT 58.169 33.333 0.00 0.00 0.00 1.40
928 942 8.204160 TCAATCAATGAGAAGTCCGTGTATTAT 58.796 33.333 0.00 0.00 33.04 1.28
929 943 7.491372 GTCAATCAATGAGAAGTCCGTGTATTA 59.509 37.037 0.00 0.00 39.19 0.98
930 944 6.313905 GTCAATCAATGAGAAGTCCGTGTATT 59.686 38.462 0.00 0.00 39.19 1.89
931 945 5.812642 GTCAATCAATGAGAAGTCCGTGTAT 59.187 40.000 0.00 0.00 39.19 2.29
932 946 5.047306 AGTCAATCAATGAGAAGTCCGTGTA 60.047 40.000 0.00 0.00 39.19 2.90
933 947 3.997021 GTCAATCAATGAGAAGTCCGTGT 59.003 43.478 0.00 0.00 39.19 4.49
934 948 4.092529 CAGTCAATCAATGAGAAGTCCGTG 59.907 45.833 0.00 0.00 39.19 4.94
935 949 4.248859 CAGTCAATCAATGAGAAGTCCGT 58.751 43.478 0.00 0.00 39.19 4.69
936 950 4.092529 CACAGTCAATCAATGAGAAGTCCG 59.907 45.833 0.00 0.00 39.19 4.79
937 951 4.142730 GCACAGTCAATCAATGAGAAGTCC 60.143 45.833 0.00 0.00 39.19 3.85
938 952 4.142730 GGCACAGTCAATCAATGAGAAGTC 60.143 45.833 0.00 0.00 39.19 3.01
939 953 3.755378 GGCACAGTCAATCAATGAGAAGT 59.245 43.478 0.00 0.00 39.19 3.01
940 954 3.754850 TGGCACAGTCAATCAATGAGAAG 59.245 43.478 0.00 0.00 39.19 2.85
941 955 3.753815 TGGCACAGTCAATCAATGAGAA 58.246 40.909 0.00 0.00 39.19 2.87
942 956 3.421919 TGGCACAGTCAATCAATGAGA 57.578 42.857 0.00 0.00 39.19 3.27
960 974 3.781770 GAGACGAGCCTGCGGATGG 62.782 68.421 0.00 0.00 35.12 3.51
1017 1037 4.671590 TCCGACGCAGAGGTGGGA 62.672 66.667 0.00 0.00 41.73 4.37
1299 1319 1.078143 GCCGGTGCAGAGGAGAAAT 60.078 57.895 11.28 0.00 37.47 2.17
1344 1364 0.254178 CAGAATGGCTGGTAGGCTGT 59.746 55.000 0.00 0.00 41.96 4.40
1958 1978 1.854743 CCTGAATCATACGCACGTCTG 59.145 52.381 0.00 0.00 0.00 3.51
1989 2009 2.744709 CTAACCAACCCCACCGCG 60.745 66.667 0.00 0.00 0.00 6.46
1997 2017 2.435410 CGACGGCCCTAACCAACC 60.435 66.667 0.00 0.00 0.00 3.77
2045 2065 4.702612 TCTTCTGTCTCTAACTCGAAGCAT 59.297 41.667 0.00 0.00 36.70 3.79
2048 2068 5.873179 ACTCTTCTGTCTCTAACTCGAAG 57.127 43.478 0.00 0.00 37.41 3.79
2074 2097 3.557595 CCGAAATATCCTGACAGCTGAAC 59.442 47.826 23.35 14.31 0.00 3.18
2104 2127 4.159879 GCGGCCACAGATTATACCTAGTAT 59.840 45.833 2.24 0.00 33.05 2.12
2129 2188 5.990120 AATAGAAGAAACCAAGCAAGCAT 57.010 34.783 0.00 0.00 0.00 3.79
2130 2189 5.789643 AAATAGAAGAAACCAAGCAAGCA 57.210 34.783 0.00 0.00 0.00 3.91
2131 2190 5.635280 GGAAAATAGAAGAAACCAAGCAAGC 59.365 40.000 0.00 0.00 0.00 4.01
2134 2193 6.068010 TCAGGAAAATAGAAGAAACCAAGCA 58.932 36.000 0.00 0.00 0.00 3.91
2397 4533 2.708861 TGGTTTGAGGAGCCTTTAGACA 59.291 45.455 0.00 0.00 0.00 3.41
2398 4534 3.418684 TGGTTTGAGGAGCCTTTAGAC 57.581 47.619 0.00 0.00 0.00 2.59
2510 4646 7.444299 ACTGTTATCATTTTGCCTGTGATTTT 58.556 30.769 0.00 0.00 34.62 1.82
2520 4656 6.984740 TTTTGACGACTGTTATCATTTTGC 57.015 33.333 0.00 0.00 0.00 3.68
2588 4724 6.072673 ACTCGGACAATTTGAAGGTTATTGAC 60.073 38.462 2.79 0.00 34.28 3.18
2614 4750 2.286008 CCATGCAATCGTCTCGTCATTG 60.286 50.000 0.00 0.00 0.00 2.82
2656 4792 2.095461 GAACCTTTGGCCCTCAGATTC 58.905 52.381 0.00 0.00 0.00 2.52
2684 4820 2.938451 TCGATTTGTGTGCTGATGGATC 59.062 45.455 0.00 0.00 0.00 3.36
2715 4851 3.583882 ATTCACTGCGGGTTGGGGG 62.584 63.158 0.00 0.00 0.00 5.40
2716 4852 1.606313 AATTCACTGCGGGTTGGGG 60.606 57.895 0.00 0.00 0.00 4.96
2717 4853 1.586028 CAATTCACTGCGGGTTGGG 59.414 57.895 0.00 0.00 0.00 4.12
2718 4854 0.893270 TCCAATTCACTGCGGGTTGG 60.893 55.000 12.42 12.42 40.45 3.77
2719 4855 0.240945 GTCCAATTCACTGCGGGTTG 59.759 55.000 0.00 0.00 0.00 3.77
2720 4856 0.110486 AGTCCAATTCACTGCGGGTT 59.890 50.000 0.00 0.00 0.00 4.11
2728 4864 3.193479 GGGGATGACAAAGTCCAATTCAC 59.807 47.826 0.00 0.00 36.19 3.18
2783 5212 5.180367 TGTTGACGCATCTTTTGATCAAA 57.820 34.783 16.91 16.91 36.97 2.69
2892 5321 3.983988 CACATCTCTATTCACGCGCTTAT 59.016 43.478 5.73 0.00 0.00 1.73
2901 5330 5.901853 AGAATGACCTCCACATCTCTATTCA 59.098 40.000 0.00 0.00 0.00 2.57
2959 5388 2.180086 ACTGCTAGATATCTGGGGTGGA 59.820 50.000 15.79 1.41 0.00 4.02
3031 5460 9.368674 GTAGTTCCAGATTCCTACTTCTTTTAC 57.631 37.037 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.