Multiple sequence alignment - TraesCS3B01G263600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G263600 chr3B 100.000 3314 0 0 1 3314 422309550 422312863 0.000000e+00 6120
1 TraesCS3B01G263600 chr3B 91.972 436 20 3 1 422 680419235 680419669 6.120000e-167 597
2 TraesCS3B01G263600 chr3B 92.308 429 17 4 1 415 823510519 823510945 2.200000e-166 595
3 TraesCS3B01G263600 chr3B 88.194 432 31 8 1 414 166678920 166679349 6.390000e-137 497
4 TraesCS3B01G263600 chr3D 90.536 2927 103 67 416 3273 327522073 327519252 0.000000e+00 3711
5 TraesCS3B01G263600 chr3A 92.026 2019 97 38 604 2594 441156211 441154229 0.000000e+00 2778
6 TraesCS3B01G263600 chr3A 85.874 446 17 16 2586 3026 441154206 441153802 1.830000e-117 433
7 TraesCS3B01G263600 chr3A 92.045 176 8 3 416 586 441192057 441191883 3.300000e-60 243
8 TraesCS3B01G263600 chr3A 84.861 251 18 6 3042 3273 441153652 441153403 5.530000e-58 235
9 TraesCS3B01G263600 chr1B 93.458 428 13 4 1 415 28492166 28492591 3.630000e-174 621
10 TraesCS3B01G263600 chr1B 95.013 381 17 2 37 415 656572788 656572408 6.120000e-167 597
11 TraesCS3B01G263600 chr1B 85.082 429 41 16 1 412 649197317 649196895 1.840000e-112 416
12 TraesCS3B01G263600 chr2B 92.593 432 13 5 1 415 799411306 799411735 1.320000e-168 603
13 TraesCS3B01G263600 chr2B 89.461 427 27 6 1 415 379784556 379784976 1.050000e-144 523
14 TraesCS3B01G263600 chr4B 92.558 430 15 6 1 415 166767832 166767405 4.730000e-168 601
15 TraesCS3B01G263600 chr6B 92.361 432 15 3 1 415 654179818 654180248 1.700000e-167 599
16 TraesCS3B01G263600 chr6B 91.142 429 23 3 1 415 702362073 702362500 4.800000e-158 568
17 TraesCS3B01G263600 chr6B 93.088 217 3 1 1 205 664631039 664631255 1.160000e-79 307
18 TraesCS3B01G263600 chr5B 94.226 381 19 2 37 415 368714625 368714246 2.220000e-161 579
19 TraesCS3B01G263600 chr5A 89.535 430 30 6 1 415 672025409 672025838 6.300000e-147 531
20 TraesCS3B01G263600 chr5D 85.106 423 43 8 1 408 168228118 168228535 6.620000e-112 414


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G263600 chr3B 422309550 422312863 3313 False 6120.000000 6120 100.000 1 3314 1 chr3B.!!$F2 3313
1 TraesCS3B01G263600 chr3D 327519252 327522073 2821 True 3711.000000 3711 90.536 416 3273 1 chr3D.!!$R1 2857
2 TraesCS3B01G263600 chr3A 441153403 441156211 2808 True 1148.666667 2778 87.587 604 3273 3 chr3A.!!$R2 2669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
266 267 0.028902 GCGCTGACGTGGAAAAGTTT 59.971 50.0 0.0 0.0 42.83 2.66 F
312 313 0.098376 GCTATACGATCCTACCGCCG 59.902 60.0 0.0 0.0 0.00 6.46 F
339 340 0.111639 TGGTGGTAGGCAAAAGGGTC 59.888 55.0 0.0 0.0 0.00 4.46 F
836 847 0.252057 TCATCCCCTTCCTCGTGTGA 60.252 55.0 0.0 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1077 1105 0.033504 AGTACTGTGCGTTGGTCAGG 59.966 55.0 0.00 0.00 34.02 3.86 R
1493 1530 0.035317 TCCAGTGCGCAAACATCTCT 59.965 50.0 14.00 0.00 0.00 3.10 R
1548 1593 0.389391 AGATGTCCTTGGGATACGCG 59.611 55.0 3.53 3.53 32.73 6.01 R
2658 2760 0.394192 CAGAACTCAGAGCCACCACA 59.606 55.0 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.924019 TCGATCCGCAAAATCCGT 57.076 50.000 0.00 0.00 0.00 4.69
18 19 2.673074 TCGATCCGCAAAATCCGTC 58.327 52.632 0.00 0.00 0.00 4.79
19 20 0.108567 TCGATCCGCAAAATCCGTCA 60.109 50.000 0.00 0.00 0.00 4.35
20 21 0.724549 CGATCCGCAAAATCCGTCAA 59.275 50.000 0.00 0.00 0.00 3.18
21 22 1.267532 CGATCCGCAAAATCCGTCAAG 60.268 52.381 0.00 0.00 0.00 3.02
22 23 2.006888 GATCCGCAAAATCCGTCAAGA 58.993 47.619 0.00 0.00 0.00 3.02
23 24 1.885560 TCCGCAAAATCCGTCAAGAA 58.114 45.000 0.00 0.00 0.00 2.52
24 25 2.222886 TCCGCAAAATCCGTCAAGAAA 58.777 42.857 0.00 0.00 0.00 2.52
25 26 2.031508 TCCGCAAAATCCGTCAAGAAAC 60.032 45.455 0.00 0.00 0.00 2.78
26 27 1.969256 CGCAAAATCCGTCAAGAAACG 59.031 47.619 0.00 0.00 42.24 3.60
27 28 2.349060 CGCAAAATCCGTCAAGAAACGA 60.349 45.455 0.00 0.00 45.37 3.85
28 29 3.226347 GCAAAATCCGTCAAGAAACGAG 58.774 45.455 0.00 0.00 45.37 4.18
29 30 3.810373 CAAAATCCGTCAAGAAACGAGG 58.190 45.455 0.00 0.00 45.37 4.63
30 31 3.396260 AAATCCGTCAAGAAACGAGGA 57.604 42.857 0.00 0.00 45.37 3.71
31 32 3.396260 AATCCGTCAAGAAACGAGGAA 57.604 42.857 0.00 0.00 45.37 3.36
32 33 2.433868 TCCGTCAAGAAACGAGGAAG 57.566 50.000 0.00 0.00 45.37 3.46
33 34 1.958579 TCCGTCAAGAAACGAGGAAGA 59.041 47.619 0.00 0.00 45.37 2.87
34 35 2.561419 TCCGTCAAGAAACGAGGAAGAT 59.439 45.455 0.00 0.00 45.37 2.40
35 36 2.924290 CCGTCAAGAAACGAGGAAGATC 59.076 50.000 0.00 0.00 45.37 2.75
36 37 2.594654 CGTCAAGAAACGAGGAAGATCG 59.405 50.000 0.00 0.00 45.37 3.69
37 38 2.924290 GTCAAGAAACGAGGAAGATCGG 59.076 50.000 0.91 0.00 46.91 4.18
38 39 2.823747 TCAAGAAACGAGGAAGATCGGA 59.176 45.455 0.91 0.00 46.91 4.55
39 40 3.119459 TCAAGAAACGAGGAAGATCGGAG 60.119 47.826 0.91 0.00 46.91 4.63
40 41 1.751924 AGAAACGAGGAAGATCGGAGG 59.248 52.381 0.91 0.00 46.91 4.30
41 42 0.824759 AAACGAGGAAGATCGGAGGG 59.175 55.000 0.91 0.00 46.91 4.30
42 43 1.043673 AACGAGGAAGATCGGAGGGG 61.044 60.000 0.91 0.00 46.91 4.79
43 44 1.152735 CGAGGAAGATCGGAGGGGA 60.153 63.158 0.00 0.00 39.04 4.81
44 45 0.540830 CGAGGAAGATCGGAGGGGAT 60.541 60.000 0.00 0.00 39.04 3.85
45 46 0.972883 GAGGAAGATCGGAGGGGATG 59.027 60.000 0.00 0.00 0.00 3.51
46 47 0.563173 AGGAAGATCGGAGGGGATGA 59.437 55.000 0.00 0.00 0.00 2.92
47 48 0.972883 GGAAGATCGGAGGGGATGAG 59.027 60.000 0.00 0.00 0.00 2.90
48 49 1.481428 GGAAGATCGGAGGGGATGAGA 60.481 57.143 0.00 0.00 0.00 3.27
49 50 1.892474 GAAGATCGGAGGGGATGAGAG 59.108 57.143 0.00 0.00 0.00 3.20
50 51 1.153539 AGATCGGAGGGGATGAGAGA 58.846 55.000 0.00 0.00 0.00 3.10
51 52 1.075374 AGATCGGAGGGGATGAGAGAG 59.925 57.143 0.00 0.00 0.00 3.20
52 53 0.114168 ATCGGAGGGGATGAGAGAGG 59.886 60.000 0.00 0.00 0.00 3.69
53 54 1.532794 CGGAGGGGATGAGAGAGGG 60.533 68.421 0.00 0.00 0.00 4.30
54 55 1.841103 GGAGGGGATGAGAGAGGGC 60.841 68.421 0.00 0.00 0.00 5.19
55 56 2.123077 AGGGGATGAGAGAGGGCG 60.123 66.667 0.00 0.00 0.00 6.13
56 57 2.123251 GGGGATGAGAGAGGGCGA 60.123 66.667 0.00 0.00 0.00 5.54
57 58 2.503382 GGGGATGAGAGAGGGCGAC 61.503 68.421 0.00 0.00 0.00 5.19
58 59 1.456705 GGGATGAGAGAGGGCGACT 60.457 63.158 0.00 0.00 0.00 4.18
59 60 1.045911 GGGATGAGAGAGGGCGACTT 61.046 60.000 0.00 0.00 0.00 3.01
60 61 0.827368 GGATGAGAGAGGGCGACTTT 59.173 55.000 0.00 0.00 0.00 2.66
61 62 1.472376 GGATGAGAGAGGGCGACTTTG 60.472 57.143 0.00 0.00 0.00 2.77
62 63 1.478510 GATGAGAGAGGGCGACTTTGA 59.521 52.381 0.00 0.00 0.00 2.69
63 64 0.891373 TGAGAGAGGGCGACTTTGAG 59.109 55.000 0.00 0.00 0.00 3.02
64 65 0.459411 GAGAGAGGGCGACTTTGAGC 60.459 60.000 0.00 0.00 0.00 4.26
65 66 1.188219 AGAGAGGGCGACTTTGAGCA 61.188 55.000 0.00 0.00 34.54 4.26
66 67 0.739112 GAGAGGGCGACTTTGAGCAG 60.739 60.000 0.00 0.00 34.54 4.24
67 68 1.004440 GAGGGCGACTTTGAGCAGT 60.004 57.895 0.00 0.00 34.54 4.40
68 69 0.603975 GAGGGCGACTTTGAGCAGTT 60.604 55.000 0.00 0.00 34.54 3.16
69 70 0.179018 AGGGCGACTTTGAGCAGTTT 60.179 50.000 0.00 0.00 34.54 2.66
70 71 0.668535 GGGCGACTTTGAGCAGTTTT 59.331 50.000 0.00 0.00 34.54 2.43
71 72 1.600413 GGGCGACTTTGAGCAGTTTTG 60.600 52.381 0.00 0.00 34.54 2.44
83 84 2.644078 GCAGTTTTGCTCTGTTCTTCG 58.356 47.619 0.00 0.00 46.95 3.79
84 85 2.032178 GCAGTTTTGCTCTGTTCTTCGT 59.968 45.455 0.00 0.00 46.95 3.85
85 86 3.611517 CAGTTTTGCTCTGTTCTTCGTG 58.388 45.455 0.00 0.00 0.00 4.35
86 87 2.614057 AGTTTTGCTCTGTTCTTCGTGG 59.386 45.455 0.00 0.00 0.00 4.94
87 88 2.325583 TTTGCTCTGTTCTTCGTGGT 57.674 45.000 0.00 0.00 0.00 4.16
88 89 1.581934 TTGCTCTGTTCTTCGTGGTG 58.418 50.000 0.00 0.00 0.00 4.17
89 90 0.249868 TGCTCTGTTCTTCGTGGTGG 60.250 55.000 0.00 0.00 0.00 4.61
90 91 0.951040 GCTCTGTTCTTCGTGGTGGG 60.951 60.000 0.00 0.00 0.00 4.61
91 92 0.320771 CTCTGTTCTTCGTGGTGGGG 60.321 60.000 0.00 0.00 0.00 4.96
92 93 1.302511 CTGTTCTTCGTGGTGGGGG 60.303 63.158 0.00 0.00 0.00 5.40
112 113 3.264845 GGCTGGGTGGGGGAGAAA 61.265 66.667 0.00 0.00 0.00 2.52
113 114 2.626467 GGCTGGGTGGGGGAGAAAT 61.626 63.158 0.00 0.00 0.00 2.17
114 115 1.380380 GCTGGGTGGGGGAGAAATG 60.380 63.158 0.00 0.00 0.00 2.32
115 116 1.307647 CTGGGTGGGGGAGAAATGG 59.692 63.158 0.00 0.00 0.00 3.16
116 117 2.228841 CTGGGTGGGGGAGAAATGGG 62.229 65.000 0.00 0.00 0.00 4.00
117 118 2.246126 GGGTGGGGGAGAAATGGGT 61.246 63.158 0.00 0.00 0.00 4.51
118 119 1.000359 GGTGGGGGAGAAATGGGTG 60.000 63.158 0.00 0.00 0.00 4.61
119 120 1.000359 GTGGGGGAGAAATGGGTGG 60.000 63.158 0.00 0.00 0.00 4.61
120 121 2.245379 TGGGGGAGAAATGGGTGGG 61.245 63.158 0.00 0.00 0.00 4.61
121 122 2.689813 GGGGAGAAATGGGTGGGG 59.310 66.667 0.00 0.00 0.00 4.96
122 123 2.689813 GGGAGAAATGGGTGGGGG 59.310 66.667 0.00 0.00 0.00 5.40
123 124 2.042944 GGAGAAATGGGTGGGGGC 60.043 66.667 0.00 0.00 0.00 5.80
124 125 2.440247 GAGAAATGGGTGGGGGCG 60.440 66.667 0.00 0.00 0.00 6.13
125 126 4.060667 AGAAATGGGTGGGGGCGG 62.061 66.667 0.00 0.00 0.00 6.13
142 143 4.914388 GCCGGCCCGCGGTTTATA 62.914 66.667 26.12 0.00 0.00 0.98
143 144 2.031465 CCGGCCCGCGGTTTATAT 59.969 61.111 26.12 0.00 0.00 0.86
144 145 1.292860 CCGGCCCGCGGTTTATATA 59.707 57.895 26.12 0.00 0.00 0.86
145 146 0.108041 CCGGCCCGCGGTTTATATAT 60.108 55.000 26.12 0.00 0.00 0.86
146 147 1.003851 CGGCCCGCGGTTTATATATG 58.996 55.000 26.12 6.10 0.00 1.78
147 148 1.673626 CGGCCCGCGGTTTATATATGT 60.674 52.381 26.12 0.00 0.00 2.29
148 149 2.004733 GGCCCGCGGTTTATATATGTC 58.995 52.381 26.12 2.18 0.00 3.06
149 150 2.004733 GCCCGCGGTTTATATATGTCC 58.995 52.381 26.12 0.00 0.00 4.02
150 151 2.613474 GCCCGCGGTTTATATATGTCCA 60.613 50.000 26.12 0.00 0.00 4.02
151 152 2.997986 CCCGCGGTTTATATATGTCCAC 59.002 50.000 26.12 0.00 0.00 4.02
152 153 3.555377 CCCGCGGTTTATATATGTCCACA 60.555 47.826 26.12 0.00 0.00 4.17
153 154 3.430895 CCGCGGTTTATATATGTCCACAC 59.569 47.826 19.50 0.00 0.00 3.82
154 155 3.430895 CGCGGTTTATATATGTCCACACC 59.569 47.826 0.00 0.00 0.00 4.16
155 156 3.749609 GCGGTTTATATATGTCCACACCC 59.250 47.826 0.00 0.00 0.00 4.61
156 157 4.504340 GCGGTTTATATATGTCCACACCCT 60.504 45.833 0.00 0.00 0.00 4.34
157 158 5.279607 GCGGTTTATATATGTCCACACCCTA 60.280 44.000 0.00 0.00 0.00 3.53
158 159 6.161381 CGGTTTATATATGTCCACACCCTAC 58.839 44.000 0.00 0.00 0.00 3.18
159 160 6.470278 GGTTTATATATGTCCACACCCTACC 58.530 44.000 0.00 0.00 0.00 3.18
160 161 5.988310 TTATATATGTCCACACCCTACCG 57.012 43.478 0.00 0.00 0.00 4.02
161 162 0.756903 ATATGTCCACACCCTACCGC 59.243 55.000 0.00 0.00 0.00 5.68
162 163 1.332144 TATGTCCACACCCTACCGCC 61.332 60.000 0.00 0.00 0.00 6.13
163 164 4.446413 GTCCACACCCTACCGCCG 62.446 72.222 0.00 0.00 0.00 6.46
166 167 4.143333 CACACCCTACCGCCGGAG 62.143 72.222 11.71 0.00 0.00 4.63
167 168 4.371417 ACACCCTACCGCCGGAGA 62.371 66.667 11.71 0.00 0.00 3.71
168 169 3.834799 CACCCTACCGCCGGAGAC 61.835 72.222 11.71 0.00 0.00 3.36
169 170 4.057943 ACCCTACCGCCGGAGACT 62.058 66.667 11.71 0.00 0.00 3.24
170 171 3.217743 CCCTACCGCCGGAGACTC 61.218 72.222 11.71 0.00 0.00 3.36
171 172 2.124236 CCTACCGCCGGAGACTCT 60.124 66.667 11.71 0.00 0.00 3.24
172 173 2.482333 CCTACCGCCGGAGACTCTG 61.482 68.421 11.71 4.11 0.00 3.35
173 174 1.451567 CTACCGCCGGAGACTCTGA 60.452 63.158 11.71 0.00 0.00 3.27
174 175 1.716826 CTACCGCCGGAGACTCTGAC 61.717 65.000 11.71 0.00 0.00 3.51
175 176 4.180946 CCGCCGGAGACTCTGACG 62.181 72.222 13.17 12.86 0.00 4.35
178 179 4.631773 CCGGAGACTCTGACGGTA 57.368 61.111 13.17 0.00 41.34 4.02
179 180 2.395651 CCGGAGACTCTGACGGTAG 58.604 63.158 13.17 0.00 41.34 3.18
180 181 1.096386 CCGGAGACTCTGACGGTAGG 61.096 65.000 13.17 0.00 41.34 3.18
181 182 0.392729 CGGAGACTCTGACGGTAGGT 60.393 60.000 5.24 0.00 0.00 3.08
182 183 1.836802 GGAGACTCTGACGGTAGGTT 58.163 55.000 1.74 0.00 0.00 3.50
183 184 1.744522 GGAGACTCTGACGGTAGGTTC 59.255 57.143 1.74 0.00 0.00 3.62
184 185 2.434428 GAGACTCTGACGGTAGGTTCA 58.566 52.381 0.00 0.00 0.00 3.18
185 186 2.420722 GAGACTCTGACGGTAGGTTCAG 59.579 54.545 0.00 0.00 0.00 3.02
186 187 2.040012 AGACTCTGACGGTAGGTTCAGA 59.960 50.000 1.58 1.58 37.61 3.27
187 188 2.161030 ACTCTGACGGTAGGTTCAGAC 58.839 52.381 0.00 0.00 35.64 3.51
188 189 2.160205 CTCTGACGGTAGGTTCAGACA 58.840 52.381 0.00 0.00 35.64 3.41
189 190 2.557056 CTCTGACGGTAGGTTCAGACAA 59.443 50.000 0.00 0.00 35.64 3.18
190 191 2.295349 TCTGACGGTAGGTTCAGACAAC 59.705 50.000 0.00 0.00 34.70 3.32
191 192 1.342174 TGACGGTAGGTTCAGACAACC 59.658 52.381 0.00 0.00 40.58 3.77
197 198 2.836944 GGTTCAGACAACCTACCGC 58.163 57.895 0.00 0.00 37.34 5.68
198 199 0.672711 GGTTCAGACAACCTACCGCC 60.673 60.000 0.00 0.00 37.34 6.13
199 200 1.012486 GTTCAGACAACCTACCGCCG 61.012 60.000 0.00 0.00 0.00 6.46
200 201 2.125673 CAGACAACCTACCGCCGG 60.126 66.667 0.00 0.00 0.00 6.13
201 202 3.387947 AGACAACCTACCGCCGGG 61.388 66.667 8.57 0.00 40.11 5.73
224 225 4.789075 CGGCGGTAGGGTGTGACG 62.789 72.222 0.00 0.00 0.00 4.35
225 226 4.446413 GGCGGTAGGGTGTGACGG 62.446 72.222 0.00 0.00 0.00 4.79
226 227 4.446413 GCGGTAGGGTGTGACGGG 62.446 72.222 0.00 0.00 0.00 5.28
227 228 3.766691 CGGTAGGGTGTGACGGGG 61.767 72.222 0.00 0.00 0.00 5.73
228 229 3.396570 GGTAGGGTGTGACGGGGG 61.397 72.222 0.00 0.00 0.00 5.40
243 244 4.397832 GGGGAACGGCGGCAGTTA 62.398 66.667 18.14 0.00 31.14 2.24
244 245 2.124860 GGGAACGGCGGCAGTTAT 60.125 61.111 18.14 0.00 31.14 1.89
245 246 2.178235 GGGAACGGCGGCAGTTATC 61.178 63.158 18.14 12.96 31.14 1.75
246 247 2.522638 GGAACGGCGGCAGTTATCG 61.523 63.158 18.14 5.52 31.14 2.92
247 248 2.510691 AACGGCGGCAGTTATCGG 60.511 61.111 16.75 0.00 0.00 4.18
252 253 3.630148 CGGCAGTTATCGGCGCTG 61.630 66.667 10.86 10.86 45.66 5.18
253 254 2.202878 GGCAGTTATCGGCGCTGA 60.203 61.111 23.40 23.40 35.70 4.26
254 255 2.526120 GGCAGTTATCGGCGCTGAC 61.526 63.158 23.67 10.03 35.70 3.51
255 256 2.860628 GCAGTTATCGGCGCTGACG 61.861 63.158 23.67 10.02 44.07 4.35
256 257 1.516386 CAGTTATCGGCGCTGACGT 60.516 57.895 23.67 9.62 42.83 4.34
257 258 1.516386 AGTTATCGGCGCTGACGTG 60.516 57.895 23.67 0.00 42.83 4.49
258 259 2.202690 TTATCGGCGCTGACGTGG 60.203 61.111 23.67 0.00 42.83 4.94
259 260 2.702788 TTATCGGCGCTGACGTGGA 61.703 57.895 23.67 2.78 42.83 4.02
260 261 2.215465 TTATCGGCGCTGACGTGGAA 62.215 55.000 23.67 8.10 42.83 3.53
261 262 2.215465 TATCGGCGCTGACGTGGAAA 62.215 55.000 23.67 0.00 42.83 3.13
262 263 3.342627 CGGCGCTGACGTGGAAAA 61.343 61.111 11.90 0.00 42.83 2.29
263 264 2.556287 GGCGCTGACGTGGAAAAG 59.444 61.111 7.64 0.00 42.83 2.27
264 265 2.251642 GGCGCTGACGTGGAAAAGT 61.252 57.895 7.64 0.00 42.83 2.66
265 266 1.647084 GCGCTGACGTGGAAAAGTT 59.353 52.632 0.00 0.00 42.83 2.66
266 267 0.028902 GCGCTGACGTGGAAAAGTTT 59.971 50.000 0.00 0.00 42.83 2.66
267 268 1.741993 CGCTGACGTGGAAAAGTTTG 58.258 50.000 0.00 0.00 33.53 2.93
268 269 1.477105 GCTGACGTGGAAAAGTTTGC 58.523 50.000 0.00 0.00 0.00 3.68
269 270 1.065551 GCTGACGTGGAAAAGTTTGCT 59.934 47.619 0.00 0.00 0.00 3.91
270 271 2.289547 GCTGACGTGGAAAAGTTTGCTA 59.710 45.455 0.00 0.00 0.00 3.49
271 272 3.848554 GCTGACGTGGAAAAGTTTGCTAC 60.849 47.826 0.00 0.00 0.00 3.58
272 273 2.614983 TGACGTGGAAAAGTTTGCTACC 59.385 45.455 4.60 0.58 0.00 3.18
273 274 1.600485 ACGTGGAAAAGTTTGCTACCG 59.400 47.619 4.60 3.17 0.00 4.02
274 275 1.662026 CGTGGAAAAGTTTGCTACCGC 60.662 52.381 4.60 5.11 0.00 5.68
275 276 0.955905 TGGAAAAGTTTGCTACCGCC 59.044 50.000 0.00 0.00 34.43 6.13
276 277 0.109919 GGAAAAGTTTGCTACCGCCG 60.110 55.000 0.00 0.00 34.43 6.46
277 278 0.728129 GAAAAGTTTGCTACCGCCGC 60.728 55.000 0.00 0.00 34.43 6.53
278 279 1.448922 AAAAGTTTGCTACCGCCGCA 61.449 50.000 0.00 0.00 35.22 5.69
279 280 1.448922 AAAGTTTGCTACCGCCGCAA 61.449 50.000 0.00 0.00 44.83 4.85
280 281 1.241315 AAGTTTGCTACCGCCGCAAT 61.241 50.000 5.33 0.00 45.67 3.56
281 282 1.514014 GTTTGCTACCGCCGCAATG 60.514 57.895 5.33 0.00 45.67 2.82
282 283 1.969064 TTTGCTACCGCCGCAATGT 60.969 52.632 5.33 0.00 45.67 2.71
283 284 1.519751 TTTGCTACCGCCGCAATGTT 61.520 50.000 5.33 0.00 45.67 2.71
284 285 1.917782 TTGCTACCGCCGCAATGTTC 61.918 55.000 0.00 0.00 41.97 3.18
285 286 2.701006 CTACCGCCGCAATGTTCG 59.299 61.111 0.00 0.00 0.00 3.95
291 292 4.287580 CCGCAATGTTCGGTGGTA 57.712 55.556 0.00 0.00 41.85 3.25
292 293 2.086510 CCGCAATGTTCGGTGGTAG 58.913 57.895 0.00 0.00 41.85 3.18
293 294 1.366111 CCGCAATGTTCGGTGGTAGG 61.366 60.000 0.00 0.00 41.85 3.18
294 295 1.800681 GCAATGTTCGGTGGTAGGC 59.199 57.895 0.00 0.00 0.00 3.93
295 296 0.676782 GCAATGTTCGGTGGTAGGCT 60.677 55.000 0.00 0.00 0.00 4.58
296 297 1.406341 GCAATGTTCGGTGGTAGGCTA 60.406 52.381 0.00 0.00 0.00 3.93
297 298 2.745152 GCAATGTTCGGTGGTAGGCTAT 60.745 50.000 0.00 0.00 0.00 2.97
298 299 3.493699 GCAATGTTCGGTGGTAGGCTATA 60.494 47.826 0.00 0.00 0.00 1.31
299 300 4.056050 CAATGTTCGGTGGTAGGCTATAC 58.944 47.826 0.00 0.25 0.00 1.47
300 301 1.677576 TGTTCGGTGGTAGGCTATACG 59.322 52.381 0.00 0.75 0.00 3.06
301 302 1.949525 GTTCGGTGGTAGGCTATACGA 59.050 52.381 0.00 3.24 0.00 3.43
302 303 2.555757 GTTCGGTGGTAGGCTATACGAT 59.444 50.000 0.00 0.00 0.00 3.73
303 304 2.430465 TCGGTGGTAGGCTATACGATC 58.570 52.381 0.00 0.00 0.00 3.69
304 305 1.471684 CGGTGGTAGGCTATACGATCC 59.528 57.143 0.00 0.00 0.00 3.36
305 306 2.805194 GGTGGTAGGCTATACGATCCT 58.195 52.381 0.00 0.00 0.00 3.24
306 307 3.620719 CGGTGGTAGGCTATACGATCCTA 60.621 52.174 0.00 0.00 0.00 2.94
310 311 1.461559 AGGCTATACGATCCTACCGC 58.538 55.000 0.00 0.00 0.00 5.68
311 312 0.455005 GGCTATACGATCCTACCGCC 59.545 60.000 0.00 0.00 0.00 6.13
312 313 0.098376 GCTATACGATCCTACCGCCG 59.902 60.000 0.00 0.00 0.00 6.46
313 314 0.731417 CTATACGATCCTACCGCCGG 59.269 60.000 0.00 0.00 0.00 6.13
314 315 0.677731 TATACGATCCTACCGCCGGG 60.678 60.000 8.57 0.00 40.11 5.73
321 322 4.530857 CTACCGCCGGGCCTCTTG 62.531 72.222 14.55 0.00 36.48 3.02
327 328 3.006728 CCGGGCCTCTTGGTGGTA 61.007 66.667 0.84 0.00 35.27 3.25
328 329 2.584608 CGGGCCTCTTGGTGGTAG 59.415 66.667 0.84 0.00 35.27 3.18
329 330 2.998949 GGGCCTCTTGGTGGTAGG 59.001 66.667 0.84 0.00 35.27 3.18
334 335 2.286365 CCTCTTGGTGGTAGGCAAAA 57.714 50.000 0.00 0.00 0.00 2.44
335 336 2.162681 CCTCTTGGTGGTAGGCAAAAG 58.837 52.381 0.00 0.00 0.00 2.27
336 337 2.162681 CTCTTGGTGGTAGGCAAAAGG 58.837 52.381 0.00 0.00 0.00 3.11
337 338 1.203001 TCTTGGTGGTAGGCAAAAGGG 60.203 52.381 0.00 0.00 0.00 3.95
338 339 0.558712 TTGGTGGTAGGCAAAAGGGT 59.441 50.000 0.00 0.00 0.00 4.34
339 340 0.111639 TGGTGGTAGGCAAAAGGGTC 59.888 55.000 0.00 0.00 0.00 4.46
340 341 0.111639 GGTGGTAGGCAAAAGGGTCA 59.888 55.000 0.00 0.00 0.00 4.02
341 342 1.479757 GGTGGTAGGCAAAAGGGTCAA 60.480 52.381 0.00 0.00 0.00 3.18
342 343 2.312390 GTGGTAGGCAAAAGGGTCAAA 58.688 47.619 0.00 0.00 0.00 2.69
343 344 2.897326 GTGGTAGGCAAAAGGGTCAAAT 59.103 45.455 0.00 0.00 0.00 2.32
344 345 3.056821 GTGGTAGGCAAAAGGGTCAAATC 60.057 47.826 0.00 0.00 0.00 2.17
345 346 2.496070 GGTAGGCAAAAGGGTCAAATCC 59.504 50.000 0.00 0.00 0.00 3.01
346 347 2.702270 AGGCAAAAGGGTCAAATCCT 57.298 45.000 0.00 0.00 35.88 3.24
347 348 2.250924 AGGCAAAAGGGTCAAATCCTG 58.749 47.619 0.00 0.00 34.34 3.86
348 349 2.158325 AGGCAAAAGGGTCAAATCCTGA 60.158 45.455 0.00 0.00 34.34 3.86
349 350 2.632512 GGCAAAAGGGTCAAATCCTGAA 59.367 45.455 0.00 0.00 35.22 3.02
350 351 3.070878 GGCAAAAGGGTCAAATCCTGAAA 59.929 43.478 0.00 0.00 35.22 2.69
351 352 4.263025 GGCAAAAGGGTCAAATCCTGAAAT 60.263 41.667 0.00 0.00 35.22 2.17
352 353 5.046663 GGCAAAAGGGTCAAATCCTGAAATA 60.047 40.000 0.00 0.00 35.22 1.40
353 354 6.352137 GGCAAAAGGGTCAAATCCTGAAATAT 60.352 38.462 0.00 0.00 35.22 1.28
354 355 7.105588 GCAAAAGGGTCAAATCCTGAAATATT 58.894 34.615 0.00 0.00 35.22 1.28
355 356 7.607607 GCAAAAGGGTCAAATCCTGAAATATTT 59.392 33.333 0.00 0.00 35.22 1.40
356 357 9.506018 CAAAAGGGTCAAATCCTGAAATATTTT 57.494 29.630 1.43 0.00 35.22 1.82
357 358 9.725019 AAAAGGGTCAAATCCTGAAATATTTTC 57.275 29.630 1.43 0.00 35.22 2.29
358 359 8.434589 AAGGGTCAAATCCTGAAATATTTTCA 57.565 30.769 1.43 2.96 35.22 2.69
359 360 8.071177 AGGGTCAAATCCTGAAATATTTTCAG 57.929 34.615 18.63 18.63 44.05 3.02
360 361 7.895429 AGGGTCAAATCCTGAAATATTTTCAGA 59.105 33.333 24.46 14.34 46.57 3.27
361 362 7.976175 GGGTCAAATCCTGAAATATTTTCAGAC 59.024 37.037 24.46 15.82 46.57 3.51
362 363 8.743714 GGTCAAATCCTGAAATATTTTCAGACT 58.256 33.333 24.46 12.45 46.57 3.24
363 364 9.565213 GTCAAATCCTGAAATATTTTCAGACTG 57.435 33.333 24.46 16.67 46.57 3.51
364 365 8.742777 TCAAATCCTGAAATATTTTCAGACTGG 58.257 33.333 24.46 13.10 46.57 4.00
365 366 7.651027 AATCCTGAAATATTTTCAGACTGGG 57.349 36.000 24.46 12.81 46.57 4.45
366 367 5.509498 TCCTGAAATATTTTCAGACTGGGG 58.491 41.667 24.46 12.25 46.57 4.96
367 368 5.015178 TCCTGAAATATTTTCAGACTGGGGT 59.985 40.000 24.46 0.00 46.57 4.95
368 369 5.358160 CCTGAAATATTTTCAGACTGGGGTC 59.642 44.000 24.46 0.00 46.57 4.46
369 370 5.886609 TGAAATATTTTCAGACTGGGGTCA 58.113 37.500 1.43 0.00 44.36 4.02
370 371 5.945784 TGAAATATTTTCAGACTGGGGTCAG 59.054 40.000 1.43 0.00 44.36 3.51
371 372 5.779241 AATATTTTCAGACTGGGGTCAGA 57.221 39.130 1.81 0.00 44.36 3.27
372 373 5.983333 ATATTTTCAGACTGGGGTCAGAT 57.017 39.130 1.81 0.00 44.36 2.90
373 374 3.703001 TTTTCAGACTGGGGTCAGATC 57.297 47.619 1.81 0.00 44.36 2.75
374 375 2.630889 TTCAGACTGGGGTCAGATCT 57.369 50.000 1.81 0.00 44.36 2.75
375 376 2.151502 TCAGACTGGGGTCAGATCTC 57.848 55.000 1.81 0.00 44.36 2.75
376 377 0.743688 CAGACTGGGGTCAGATCTCG 59.256 60.000 0.00 0.00 44.36 4.04
377 378 0.626382 AGACTGGGGTCAGATCTCGA 59.374 55.000 0.00 0.00 44.36 4.04
378 379 1.216678 AGACTGGGGTCAGATCTCGAT 59.783 52.381 0.00 0.00 44.36 3.59
379 380 2.035632 GACTGGGGTCAGATCTCGATT 58.964 52.381 0.00 0.00 43.49 3.34
380 381 2.432510 GACTGGGGTCAGATCTCGATTT 59.567 50.000 0.00 0.00 43.49 2.17
381 382 2.840651 ACTGGGGTCAGATCTCGATTTT 59.159 45.455 0.00 0.00 43.49 1.82
382 383 3.201290 CTGGGGTCAGATCTCGATTTTG 58.799 50.000 0.00 0.00 43.49 2.44
383 384 2.571653 TGGGGTCAGATCTCGATTTTGT 59.428 45.455 0.00 0.00 0.00 2.83
384 385 3.009033 TGGGGTCAGATCTCGATTTTGTT 59.991 43.478 0.00 0.00 0.00 2.83
385 386 4.010349 GGGGTCAGATCTCGATTTTGTTT 58.990 43.478 0.00 0.00 0.00 2.83
386 387 4.095036 GGGGTCAGATCTCGATTTTGTTTC 59.905 45.833 0.00 0.00 0.00 2.78
387 388 4.695455 GGGTCAGATCTCGATTTTGTTTCA 59.305 41.667 0.00 0.00 0.00 2.69
388 389 5.390991 GGGTCAGATCTCGATTTTGTTTCAC 60.391 44.000 0.00 0.00 0.00 3.18
389 390 5.308927 GTCAGATCTCGATTTTGTTTCACG 58.691 41.667 0.00 0.00 0.00 4.35
390 391 5.118664 GTCAGATCTCGATTTTGTTTCACGA 59.881 40.000 0.00 0.00 0.00 4.35
391 392 5.694458 TCAGATCTCGATTTTGTTTCACGAA 59.306 36.000 0.00 0.00 32.85 3.85
392 393 6.201997 TCAGATCTCGATTTTGTTTCACGAAA 59.798 34.615 0.00 0.00 36.06 3.46
393 394 6.517714 CAGATCTCGATTTTGTTTCACGAAAG 59.482 38.462 0.00 0.00 35.17 2.62
394 395 5.090652 TCTCGATTTTGTTTCACGAAAGG 57.909 39.130 0.00 0.00 35.17 3.11
395 396 4.024387 TCTCGATTTTGTTTCACGAAAGGG 60.024 41.667 0.00 0.00 35.17 3.95
396 397 3.628487 TCGATTTTGTTTCACGAAAGGGT 59.372 39.130 0.00 0.00 35.17 4.34
397 398 3.972502 CGATTTTGTTTCACGAAAGGGTC 59.027 43.478 0.00 0.00 35.17 4.46
398 399 4.496673 CGATTTTGTTTCACGAAAGGGTCA 60.497 41.667 0.00 0.00 35.17 4.02
399 400 4.785511 TTTTGTTTCACGAAAGGGTCAA 57.214 36.364 0.00 0.00 34.73 3.18
400 401 4.785511 TTTGTTTCACGAAAGGGTCAAA 57.214 36.364 0.00 0.00 34.73 2.69
401 402 4.785511 TTGTTTCACGAAAGGGTCAAAA 57.214 36.364 0.00 0.00 34.73 2.44
402 403 4.099380 TGTTTCACGAAAGGGTCAAAAC 57.901 40.909 0.00 0.00 34.73 2.43
403 404 3.506455 TGTTTCACGAAAGGGTCAAAACA 59.494 39.130 0.00 0.00 33.58 2.83
404 405 3.768468 TTCACGAAAGGGTCAAAACAC 57.232 42.857 0.00 0.00 34.73 3.32
405 406 1.666700 TCACGAAAGGGTCAAAACACG 59.333 47.619 0.00 0.00 32.44 4.49
406 407 1.666700 CACGAAAGGGTCAAAACACGA 59.333 47.619 0.00 0.00 32.44 4.35
407 408 2.096174 CACGAAAGGGTCAAAACACGAA 59.904 45.455 0.00 0.00 32.44 3.85
408 409 2.748532 ACGAAAGGGTCAAAACACGAAA 59.251 40.909 0.00 0.00 32.44 3.46
409 410 3.379057 ACGAAAGGGTCAAAACACGAAAT 59.621 39.130 0.00 0.00 32.44 2.17
410 411 4.142337 ACGAAAGGGTCAAAACACGAAATT 60.142 37.500 0.00 0.00 32.44 1.82
411 412 4.801516 CGAAAGGGTCAAAACACGAAATTT 59.198 37.500 0.00 0.00 32.44 1.82
412 413 5.289917 CGAAAGGGTCAAAACACGAAATTTT 59.710 36.000 0.00 0.00 32.44 1.82
413 414 6.415798 AAAGGGTCAAAACACGAAATTTTG 57.584 33.333 3.73 3.73 44.74 2.44
414 415 3.868661 AGGGTCAAAACACGAAATTTTGC 59.131 39.130 5.27 11.02 43.62 3.68
470 475 0.810031 CGTCCATGACATCCCGGTTC 60.810 60.000 0.00 0.00 32.09 3.62
530 535 1.445410 TCATGCGAGTACGTGGTGC 60.445 57.895 0.00 0.00 41.98 5.01
565 571 3.303066 GCATAATCAATAGTCGCACGCAA 60.303 43.478 0.00 0.00 0.00 4.85
576 582 2.353839 CACGCAACACAAGGCAGC 60.354 61.111 0.00 0.00 0.00 5.25
593 599 2.097466 GCAGCGTTAGGTTACATTGCAT 59.903 45.455 0.00 0.00 31.27 3.96
594 600 3.427503 GCAGCGTTAGGTTACATTGCATT 60.428 43.478 0.00 0.00 31.27 3.56
595 601 4.097714 CAGCGTTAGGTTACATTGCATTG 58.902 43.478 7.04 7.04 0.00 2.82
596 602 2.851824 GCGTTAGGTTACATTGCATTGC 59.148 45.455 8.48 0.46 0.00 3.56
597 603 3.097910 CGTTAGGTTACATTGCATTGCG 58.902 45.455 8.48 0.00 0.00 4.85
612 618 3.244345 GCATTGCGTTGCGAGTAAGTATA 59.756 43.478 0.00 0.00 32.06 1.47
618 624 7.786305 TGCGTTGCGAGTAAGTATATAATAC 57.214 36.000 0.00 0.00 0.00 1.89
758 764 0.886938 CCGCAGAGATAGCCGAGAGA 60.887 60.000 0.00 0.00 0.00 3.10
759 765 0.516877 CGCAGAGATAGCCGAGAGAG 59.483 60.000 0.00 0.00 0.00 3.20
834 845 0.833287 CATCATCCCCTTCCTCGTGT 59.167 55.000 0.00 0.00 0.00 4.49
836 847 0.252057 TCATCCCCTTCCTCGTGTGA 60.252 55.000 0.00 0.00 0.00 3.58
842 853 1.364626 CCTTCCTCGTGTGATGCTGC 61.365 60.000 0.00 0.00 0.00 5.25
843 854 1.364626 CTTCCTCGTGTGATGCTGCC 61.365 60.000 0.00 0.00 0.00 4.85
844 855 1.830587 TTCCTCGTGTGATGCTGCCT 61.831 55.000 0.00 0.00 0.00 4.75
845 856 1.812922 CCTCGTGTGATGCTGCCTC 60.813 63.158 0.00 0.00 0.00 4.70
846 857 1.217511 CTCGTGTGATGCTGCCTCT 59.782 57.895 6.49 0.00 0.00 3.69
847 858 0.390866 CTCGTGTGATGCTGCCTCTT 60.391 55.000 6.49 0.00 0.00 2.85
848 859 0.390340 TCGTGTGATGCTGCCTCTTC 60.390 55.000 6.49 1.24 0.00 2.87
883 899 5.779529 TTCTTCTTCGTGTAGTACCAAGT 57.220 39.130 0.00 0.00 30.59 3.16
902 924 8.140112 ACCAAGTTAGATAGATATCCATGGTC 57.860 38.462 12.58 1.67 33.17 4.02
943 965 2.606795 GCGAATTGCTGCAGGTTGTAAA 60.607 45.455 17.12 0.00 41.73 2.01
965 987 7.928307 AAAGTAGATAGGTGTTGTACGTAGA 57.072 36.000 0.00 0.00 33.57 2.59
966 988 7.551035 AAGTAGATAGGTGTTGTACGTAGAG 57.449 40.000 0.00 0.00 33.57 2.43
1077 1105 1.072852 GCTGGCCATCCTCATCCTC 59.927 63.158 5.51 0.00 0.00 3.71
1089 1117 1.191489 TCATCCTCCTGACCAACGCA 61.191 55.000 0.00 0.00 0.00 5.24
1098 1126 2.210116 CTGACCAACGCACAGTACTTT 58.790 47.619 0.00 0.00 0.00 2.66
1451 1479 0.409876 TGCCTCCTCTCACAGGTACT 59.590 55.000 0.00 0.00 43.95 2.73
1452 1480 1.107945 GCCTCCTCTCACAGGTACTC 58.892 60.000 0.00 0.00 43.95 2.59
1453 1481 1.617263 GCCTCCTCTCACAGGTACTCA 60.617 57.143 0.00 0.00 43.95 3.41
1454 1482 2.096248 CCTCCTCTCACAGGTACTCAC 58.904 57.143 0.00 0.00 43.95 3.51
1455 1483 2.291282 CCTCCTCTCACAGGTACTCACT 60.291 54.545 0.00 0.00 43.95 3.41
1456 1484 3.013921 CTCCTCTCACAGGTACTCACTC 58.986 54.545 0.00 0.00 43.95 3.51
1457 1485 2.096248 CCTCTCACAGGTACTCACTCC 58.904 57.143 0.00 0.00 34.60 3.85
1458 1486 2.291282 CCTCTCACAGGTACTCACTCCT 60.291 54.545 0.00 0.00 34.60 3.69
1459 1487 3.054287 CCTCTCACAGGTACTCACTCCTA 60.054 52.174 0.00 0.00 34.60 2.94
1460 1488 3.942748 CTCTCACAGGTACTCACTCCTAC 59.057 52.174 0.00 0.00 34.60 3.18
1461 1489 2.678836 CTCACAGGTACTCACTCCTACG 59.321 54.545 0.00 0.00 34.60 3.51
1462 1490 2.039480 TCACAGGTACTCACTCCTACGT 59.961 50.000 0.00 0.00 34.60 3.57
1463 1491 2.818432 CACAGGTACTCACTCCTACGTT 59.182 50.000 0.00 0.00 34.60 3.99
1464 1492 3.255149 CACAGGTACTCACTCCTACGTTT 59.745 47.826 0.00 0.00 34.60 3.60
1466 1494 4.343239 ACAGGTACTCACTCCTACGTTTTT 59.657 41.667 0.00 0.00 34.60 1.94
1471 1499 6.090493 GGTACTCACTCCTACGTTTTTCATTC 59.910 42.308 0.00 0.00 0.00 2.67
1476 1504 5.120830 CACTCCTACGTTTTTCATTCTCCTG 59.879 44.000 0.00 0.00 0.00 3.86
1477 1505 5.221661 ACTCCTACGTTTTTCATTCTCCTGT 60.222 40.000 0.00 0.00 0.00 4.00
1482 1519 4.065088 CGTTTTTCATTCTCCTGTCCTGA 58.935 43.478 0.00 0.00 0.00 3.86
1483 1520 4.153117 CGTTTTTCATTCTCCTGTCCTGAG 59.847 45.833 0.00 0.00 0.00 3.35
1484 1521 4.982241 TTTTCATTCTCCTGTCCTGAGT 57.018 40.909 0.00 0.00 0.00 3.41
1485 1522 3.969287 TTCATTCTCCTGTCCTGAGTG 57.031 47.619 0.00 0.00 0.00 3.51
1486 1523 3.175438 TCATTCTCCTGTCCTGAGTGA 57.825 47.619 0.00 0.00 0.00 3.41
1487 1524 3.510459 TCATTCTCCTGTCCTGAGTGAA 58.490 45.455 0.00 0.00 0.00 3.18
1488 1525 3.513119 TCATTCTCCTGTCCTGAGTGAAG 59.487 47.826 0.00 0.00 0.00 3.02
1489 1526 2.685106 TCTCCTGTCCTGAGTGAAGT 57.315 50.000 0.00 0.00 0.00 3.01
1490 1527 2.242926 TCTCCTGTCCTGAGTGAAGTG 58.757 52.381 0.00 0.00 0.00 3.16
1491 1528 2.158460 TCTCCTGTCCTGAGTGAAGTGA 60.158 50.000 0.00 0.00 0.00 3.41
1492 1529 2.230992 CTCCTGTCCTGAGTGAAGTGAG 59.769 54.545 0.00 0.00 0.00 3.51
1493 1530 2.158460 TCCTGTCCTGAGTGAAGTGAGA 60.158 50.000 0.00 0.00 0.00 3.27
1494 1531 2.230992 CCTGTCCTGAGTGAAGTGAGAG 59.769 54.545 0.00 0.00 0.00 3.20
1495 1532 3.153130 CTGTCCTGAGTGAAGTGAGAGA 58.847 50.000 0.00 0.00 0.00 3.10
1496 1533 3.153130 TGTCCTGAGTGAAGTGAGAGAG 58.847 50.000 0.00 0.00 0.00 3.20
1527 1572 1.089920 CTGGATTGACCTTTGAGGCG 58.910 55.000 0.00 0.00 39.63 5.52
1537 1582 1.067635 CCTTTGAGGCGGAACAAATGG 60.068 52.381 0.00 0.00 35.84 3.16
1548 1593 2.094026 GGAACAAATGGGATTGCAGGTC 60.094 50.000 0.00 0.00 33.52 3.85
1600 1645 1.343465 CGGACCAGAACAAGGTGTACT 59.657 52.381 0.00 0.00 40.09 2.73
1611 1656 0.396278 AGGTGTACTACTACCGGGCC 60.396 60.000 6.32 0.00 41.85 5.80
1953 2001 2.124695 GTCAAGGGGCGGGTGATC 60.125 66.667 0.00 0.00 0.00 2.92
1992 2040 3.347168 TCGCACTTCGAGAACGGA 58.653 55.556 0.00 0.00 43.16 4.69
2307 2355 3.776969 ACCTCTTGTTCCAGATGATGCTA 59.223 43.478 0.00 0.00 0.00 3.49
2429 2486 5.431073 TCATCTCATCTCCCTCCTTTCATTT 59.569 40.000 0.00 0.00 0.00 2.32
2436 2493 3.766051 CTCCCTCCTTTCATTTTTCCCTG 59.234 47.826 0.00 0.00 0.00 4.45
2463 2523 0.529773 TCGATCCGCTTTCCATTCCG 60.530 55.000 0.00 0.00 0.00 4.30
2485 2545 1.988846 TGATTGATGGGTGTGGTGGTA 59.011 47.619 0.00 0.00 0.00 3.25
2491 2551 1.058284 TGGGTGTGGTGGTAGTAACC 58.942 55.000 0.00 0.00 46.98 2.85
2532 2595 0.109412 GTCGGTCGTCACGGAAAGAT 60.109 55.000 0.00 0.00 33.92 2.40
2606 2703 2.131972 TCGTATTGGATTCCATTCGCG 58.868 47.619 6.15 0.00 31.53 5.87
2751 2853 4.996434 AGTCCAGCTGCACACCGC 62.996 66.667 11.11 0.00 42.89 5.68
2884 2994 2.991250 GCCCATAGCTTTCAACTCTCA 58.009 47.619 0.00 0.00 38.99 3.27
2885 2995 3.347216 GCCCATAGCTTTCAACTCTCAA 58.653 45.455 0.00 0.00 38.99 3.02
2886 2996 3.376546 GCCCATAGCTTTCAACTCTCAAG 59.623 47.826 0.00 0.00 38.99 3.02
2887 2997 4.583871 CCCATAGCTTTCAACTCTCAAGT 58.416 43.478 0.00 0.00 37.32 3.16
2888 2998 4.633565 CCCATAGCTTTCAACTCTCAAGTC 59.366 45.833 0.00 0.00 33.48 3.01
2889 2999 5.486526 CCATAGCTTTCAACTCTCAAGTCT 58.513 41.667 0.00 0.00 33.48 3.24
2890 3000 5.580297 CCATAGCTTTCAACTCTCAAGTCTC 59.420 44.000 0.00 0.00 33.48 3.36
2891 3001 4.679373 AGCTTTCAACTCTCAAGTCTCA 57.321 40.909 0.00 0.00 33.48 3.27
2932 3043 0.108945 GGAGTACGTTCCGGAACCTG 60.109 60.000 35.50 26.31 38.03 4.00
2933 3044 0.883833 GAGTACGTTCCGGAACCTGA 59.116 55.000 35.50 21.05 38.03 3.86
2934 3045 0.600057 AGTACGTTCCGGAACCTGAC 59.400 55.000 35.50 28.87 38.03 3.51
2935 3046 0.389037 GTACGTTCCGGAACCTGACC 60.389 60.000 35.50 18.42 38.03 4.02
2936 3047 0.540365 TACGTTCCGGAACCTGACCT 60.540 55.000 35.50 16.63 38.03 3.85
2937 3048 0.540365 ACGTTCCGGAACCTGACCTA 60.540 55.000 35.50 1.74 38.03 3.08
2938 3049 0.822164 CGTTCCGGAACCTGACCTAT 59.178 55.000 35.50 0.00 38.03 2.57
2939 3050 2.026641 CGTTCCGGAACCTGACCTATA 58.973 52.381 35.50 0.33 38.03 1.31
2940 3051 2.626743 CGTTCCGGAACCTGACCTATAT 59.373 50.000 35.50 0.00 38.03 0.86
2941 3052 3.552273 CGTTCCGGAACCTGACCTATATG 60.552 52.174 35.50 16.87 38.03 1.78
2942 3053 2.605257 TCCGGAACCTGACCTATATGG 58.395 52.381 0.00 0.00 42.93 2.74
2943 3054 1.002087 CCGGAACCTGACCTATATGGC 59.998 57.143 0.00 0.00 40.22 4.40
2944 3055 1.971357 CGGAACCTGACCTATATGGCT 59.029 52.381 0.00 0.00 40.22 4.75
2980 3091 2.496470 ACTTACTGCTGCTACCAGTACC 59.504 50.000 0.00 0.00 43.36 3.34
2990 3101 2.015587 CTACCAGTACCAGGACTCGAC 58.984 57.143 8.83 0.00 0.00 4.20
2995 3106 3.610619 TACCAGGACTCGACGGCGA 62.611 63.158 15.22 15.22 45.71 5.54
3110 3358 1.143183 AGCCACTTGTTCACGACGT 59.857 52.632 0.00 0.00 0.00 4.34
3150 3398 4.987912 CGACTAGGTAGCAGGTAGTAGTAC 59.012 50.000 0.00 0.00 0.00 2.73
3180 3435 0.753262 GCCACGACTCCATGATAGGT 59.247 55.000 0.00 0.00 0.00 3.08
3188 3444 2.329267 CTCCATGATAGGTGGGCTACA 58.671 52.381 2.66 0.00 37.34 2.74
3195 3451 2.189521 GGTGGGCTACATCACCGG 59.810 66.667 0.00 0.00 43.11 5.28
3196 3452 2.189521 GTGGGCTACATCACCGGG 59.810 66.667 6.32 0.00 0.00 5.73
3228 3499 2.384309 CCAACGCGGCGACACATTA 61.384 57.895 30.94 0.00 0.00 1.90
3233 3504 1.198178 ACGCGGCGACACATTATTTTT 59.802 42.857 30.94 0.00 0.00 1.94
3234 3505 1.577134 CGCGGCGACACATTATTTTTG 59.423 47.619 19.16 0.00 0.00 2.44
3263 3538 0.447801 GGCGACGCAAATGAACATCT 59.552 50.000 23.09 0.00 0.00 2.90
3268 3543 1.464608 ACGCAAATGAACATCTGTCCG 59.535 47.619 0.00 0.00 0.00 4.79
3273 3548 4.382754 GCAAATGAACATCTGTCCGTTTTC 59.617 41.667 0.00 0.00 0.00 2.29
3274 3549 5.762045 CAAATGAACATCTGTCCGTTTTCT 58.238 37.500 0.00 0.00 0.00 2.52
3275 3550 6.208644 CAAATGAACATCTGTCCGTTTTCTT 58.791 36.000 0.00 0.00 0.00 2.52
3276 3551 5.613358 ATGAACATCTGTCCGTTTTCTTC 57.387 39.130 0.00 0.00 0.00 2.87
3277 3552 4.703897 TGAACATCTGTCCGTTTTCTTCT 58.296 39.130 0.00 0.00 0.00 2.85
3278 3553 5.123227 TGAACATCTGTCCGTTTTCTTCTT 58.877 37.500 0.00 0.00 0.00 2.52
3279 3554 5.236478 TGAACATCTGTCCGTTTTCTTCTTC 59.764 40.000 0.00 0.00 0.00 2.87
3280 3555 3.741344 ACATCTGTCCGTTTTCTTCTTCG 59.259 43.478 0.00 0.00 0.00 3.79
3281 3556 3.720949 TCTGTCCGTTTTCTTCTTCGA 57.279 42.857 0.00 0.00 0.00 3.71
3282 3557 4.252971 TCTGTCCGTTTTCTTCTTCGAT 57.747 40.909 0.00 0.00 0.00 3.59
3283 3558 4.235360 TCTGTCCGTTTTCTTCTTCGATC 58.765 43.478 0.00 0.00 0.00 3.69
3284 3559 2.984471 TGTCCGTTTTCTTCTTCGATCG 59.016 45.455 9.36 9.36 0.00 3.69
3285 3560 2.344741 GTCCGTTTTCTTCTTCGATCGG 59.655 50.000 16.41 0.00 38.36 4.18
3286 3561 2.029649 TCCGTTTTCTTCTTCGATCGGT 60.030 45.455 16.41 0.00 38.21 4.69
3287 3562 2.735134 CCGTTTTCTTCTTCGATCGGTT 59.265 45.455 16.41 0.00 33.39 4.44
3288 3563 3.185797 CCGTTTTCTTCTTCGATCGGTTT 59.814 43.478 16.41 0.00 33.39 3.27
3289 3564 4.141680 CGTTTTCTTCTTCGATCGGTTTG 58.858 43.478 16.41 3.40 0.00 2.93
3290 3565 4.084745 CGTTTTCTTCTTCGATCGGTTTGA 60.085 41.667 16.41 5.78 0.00 2.69
3291 3566 5.557514 CGTTTTCTTCTTCGATCGGTTTGAA 60.558 40.000 16.41 12.71 0.00 2.69
3292 3567 4.985044 TTCTTCTTCGATCGGTTTGAAC 57.015 40.909 16.41 0.00 0.00 3.18
3293 3568 3.323243 TCTTCTTCGATCGGTTTGAACC 58.677 45.455 16.41 2.75 45.76 3.62
3294 3569 2.088950 TCTTCGATCGGTTTGAACCC 57.911 50.000 16.41 0.00 46.53 4.11
3295 3570 1.345089 TCTTCGATCGGTTTGAACCCA 59.655 47.619 16.41 0.00 46.53 4.51
3296 3571 2.027561 TCTTCGATCGGTTTGAACCCAT 60.028 45.455 16.41 0.00 46.53 4.00
3297 3572 2.483014 TCGATCGGTTTGAACCCATT 57.517 45.000 16.41 0.00 46.53 3.16
3298 3573 2.785562 TCGATCGGTTTGAACCCATTT 58.214 42.857 16.41 0.00 46.53 2.32
3299 3574 3.150767 TCGATCGGTTTGAACCCATTTT 58.849 40.909 16.41 0.00 46.53 1.82
3300 3575 3.057876 TCGATCGGTTTGAACCCATTTTG 60.058 43.478 16.41 0.00 46.53 2.44
3301 3576 3.584834 GATCGGTTTGAACCCATTTTGG 58.415 45.455 7.30 0.00 46.53 3.28
3302 3577 1.069358 TCGGTTTGAACCCATTTTGGC 59.931 47.619 7.30 0.00 46.53 4.52
3303 3578 1.875996 CGGTTTGAACCCATTTTGGCC 60.876 52.381 7.30 0.00 46.53 5.36
3304 3579 1.419762 GGTTTGAACCCATTTTGGCCT 59.580 47.619 3.32 0.00 43.43 5.19
3305 3580 2.635427 GGTTTGAACCCATTTTGGCCTA 59.365 45.455 3.32 0.00 43.43 3.93
3306 3581 3.071747 GGTTTGAACCCATTTTGGCCTAA 59.928 43.478 3.32 0.00 43.43 2.69
3307 3582 4.314961 GTTTGAACCCATTTTGGCCTAAG 58.685 43.478 3.32 0.00 35.79 2.18
3308 3583 3.252554 TGAACCCATTTTGGCCTAAGT 57.747 42.857 3.32 0.00 35.79 2.24
3309 3584 3.582164 TGAACCCATTTTGGCCTAAGTT 58.418 40.909 3.32 2.93 35.79 2.66
3310 3585 3.970640 TGAACCCATTTTGGCCTAAGTTT 59.029 39.130 3.32 0.00 35.79 2.66
3311 3586 4.202305 TGAACCCATTTTGGCCTAAGTTTG 60.202 41.667 3.32 2.09 35.79 2.93
3312 3587 2.637382 ACCCATTTTGGCCTAAGTTTGG 59.363 45.455 3.32 10.97 35.79 3.28
3313 3588 2.027285 CCCATTTTGGCCTAAGTTTGGG 60.027 50.000 21.41 21.41 35.79 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.108567 TGACGGATTTTGCGGATCGA 60.109 50.000 0.00 0.00 34.75 3.59
1 2 0.724549 TTGACGGATTTTGCGGATCG 59.275 50.000 0.00 0.00 34.75 3.69
2 3 2.006888 TCTTGACGGATTTTGCGGATC 58.993 47.619 0.00 0.00 34.75 3.36
4 5 1.885560 TTCTTGACGGATTTTGCGGA 58.114 45.000 0.00 0.00 34.75 5.54
5 6 2.315901 GTTTCTTGACGGATTTTGCGG 58.684 47.619 0.00 0.00 34.75 5.69
6 7 1.969256 CGTTTCTTGACGGATTTTGCG 59.031 47.619 0.00 0.00 39.27 4.85
7 8 3.226347 CTCGTTTCTTGACGGATTTTGC 58.774 45.455 0.00 0.00 42.98 3.68
8 9 3.496884 TCCTCGTTTCTTGACGGATTTTG 59.503 43.478 0.00 0.00 42.98 2.44
9 10 3.735591 TCCTCGTTTCTTGACGGATTTT 58.264 40.909 0.00 0.00 42.98 1.82
10 11 3.396260 TCCTCGTTTCTTGACGGATTT 57.604 42.857 0.00 0.00 42.98 2.17
11 12 3.006537 TCTTCCTCGTTTCTTGACGGATT 59.993 43.478 0.00 0.00 42.98 3.01
12 13 2.561419 TCTTCCTCGTTTCTTGACGGAT 59.439 45.455 0.00 0.00 42.98 4.18
13 14 1.958579 TCTTCCTCGTTTCTTGACGGA 59.041 47.619 0.00 0.00 42.98 4.69
14 15 2.433868 TCTTCCTCGTTTCTTGACGG 57.566 50.000 0.00 0.00 42.98 4.79
15 16 2.594654 CGATCTTCCTCGTTTCTTGACG 59.405 50.000 0.00 0.00 44.06 4.35
16 17 2.924290 CCGATCTTCCTCGTTTCTTGAC 59.076 50.000 0.00 0.00 36.93 3.18
17 18 2.823747 TCCGATCTTCCTCGTTTCTTGA 59.176 45.455 0.00 0.00 36.93 3.02
18 19 3.182967 CTCCGATCTTCCTCGTTTCTTG 58.817 50.000 0.00 0.00 36.93 3.02
19 20 2.166664 CCTCCGATCTTCCTCGTTTCTT 59.833 50.000 0.00 0.00 36.93 2.52
20 21 1.751924 CCTCCGATCTTCCTCGTTTCT 59.248 52.381 0.00 0.00 36.93 2.52
21 22 1.202428 CCCTCCGATCTTCCTCGTTTC 60.202 57.143 0.00 0.00 36.93 2.78
22 23 0.824759 CCCTCCGATCTTCCTCGTTT 59.175 55.000 0.00 0.00 36.93 3.60
23 24 1.043673 CCCCTCCGATCTTCCTCGTT 61.044 60.000 0.00 0.00 36.93 3.85
24 25 1.455959 CCCCTCCGATCTTCCTCGT 60.456 63.158 0.00 0.00 36.93 4.18
25 26 0.540830 ATCCCCTCCGATCTTCCTCG 60.541 60.000 0.00 0.00 38.37 4.63
26 27 0.972883 CATCCCCTCCGATCTTCCTC 59.027 60.000 0.00 0.00 0.00 3.71
27 28 0.563173 TCATCCCCTCCGATCTTCCT 59.437 55.000 0.00 0.00 0.00 3.36
28 29 0.972883 CTCATCCCCTCCGATCTTCC 59.027 60.000 0.00 0.00 0.00 3.46
29 30 1.892474 CTCTCATCCCCTCCGATCTTC 59.108 57.143 0.00 0.00 0.00 2.87
30 31 1.501170 TCTCTCATCCCCTCCGATCTT 59.499 52.381 0.00 0.00 0.00 2.40
31 32 1.075374 CTCTCTCATCCCCTCCGATCT 59.925 57.143 0.00 0.00 0.00 2.75
32 33 1.544724 CTCTCTCATCCCCTCCGATC 58.455 60.000 0.00 0.00 0.00 3.69
33 34 0.114168 CCTCTCTCATCCCCTCCGAT 59.886 60.000 0.00 0.00 0.00 4.18
34 35 1.539165 CCTCTCTCATCCCCTCCGA 59.461 63.158 0.00 0.00 0.00 4.55
35 36 1.532794 CCCTCTCTCATCCCCTCCG 60.533 68.421 0.00 0.00 0.00 4.63
36 37 1.841103 GCCCTCTCTCATCCCCTCC 60.841 68.421 0.00 0.00 0.00 4.30
37 38 2.206536 CGCCCTCTCTCATCCCCTC 61.207 68.421 0.00 0.00 0.00 4.30
38 39 2.123077 CGCCCTCTCTCATCCCCT 60.123 66.667 0.00 0.00 0.00 4.79
39 40 2.123251 TCGCCCTCTCTCATCCCC 60.123 66.667 0.00 0.00 0.00 4.81
40 41 1.045911 AAGTCGCCCTCTCTCATCCC 61.046 60.000 0.00 0.00 0.00 3.85
41 42 0.827368 AAAGTCGCCCTCTCTCATCC 59.173 55.000 0.00 0.00 0.00 3.51
42 43 1.478510 TCAAAGTCGCCCTCTCTCATC 59.521 52.381 0.00 0.00 0.00 2.92
43 44 1.480137 CTCAAAGTCGCCCTCTCTCAT 59.520 52.381 0.00 0.00 0.00 2.90
44 45 0.891373 CTCAAAGTCGCCCTCTCTCA 59.109 55.000 0.00 0.00 0.00 3.27
45 46 0.459411 GCTCAAAGTCGCCCTCTCTC 60.459 60.000 0.00 0.00 0.00 3.20
46 47 1.188219 TGCTCAAAGTCGCCCTCTCT 61.188 55.000 0.00 0.00 0.00 3.10
47 48 0.739112 CTGCTCAAAGTCGCCCTCTC 60.739 60.000 0.00 0.00 0.00 3.20
48 49 1.294780 CTGCTCAAAGTCGCCCTCT 59.705 57.895 0.00 0.00 0.00 3.69
49 50 0.603975 AACTGCTCAAAGTCGCCCTC 60.604 55.000 0.00 0.00 0.00 4.30
50 51 0.179018 AAACTGCTCAAAGTCGCCCT 60.179 50.000 0.00 0.00 0.00 5.19
51 52 0.668535 AAAACTGCTCAAAGTCGCCC 59.331 50.000 0.00 0.00 0.00 6.13
52 53 1.758783 CAAAACTGCTCAAAGTCGCC 58.241 50.000 0.00 0.00 0.00 5.54
53 54 1.123655 GCAAAACTGCTCAAAGTCGC 58.876 50.000 0.00 0.00 0.00 5.19
54 55 2.763249 AGCAAAACTGCTCAAAGTCG 57.237 45.000 0.00 0.00 42.12 4.18
63 64 2.032178 ACGAAGAACAGAGCAAAACTGC 59.968 45.455 0.00 0.00 38.74 4.40
64 65 3.546815 CCACGAAGAACAGAGCAAAACTG 60.547 47.826 0.00 0.00 40.68 3.16
65 66 2.614057 CCACGAAGAACAGAGCAAAACT 59.386 45.455 0.00 0.00 0.00 2.66
66 67 2.354821 ACCACGAAGAACAGAGCAAAAC 59.645 45.455 0.00 0.00 0.00 2.43
67 68 2.354510 CACCACGAAGAACAGAGCAAAA 59.645 45.455 0.00 0.00 0.00 2.44
68 69 1.939934 CACCACGAAGAACAGAGCAAA 59.060 47.619 0.00 0.00 0.00 3.68
69 70 1.581934 CACCACGAAGAACAGAGCAA 58.418 50.000 0.00 0.00 0.00 3.91
70 71 0.249868 CCACCACGAAGAACAGAGCA 60.250 55.000 0.00 0.00 0.00 4.26
71 72 0.951040 CCCACCACGAAGAACAGAGC 60.951 60.000 0.00 0.00 0.00 4.09
72 73 0.320771 CCCCACCACGAAGAACAGAG 60.321 60.000 0.00 0.00 0.00 3.35
73 74 1.752198 CCCCACCACGAAGAACAGA 59.248 57.895 0.00 0.00 0.00 3.41
74 75 1.302511 CCCCCACCACGAAGAACAG 60.303 63.158 0.00 0.00 0.00 3.16
75 76 2.833227 CCCCCACCACGAAGAACA 59.167 61.111 0.00 0.00 0.00 3.18
95 96 2.626467 ATTTCTCCCCCACCCAGCC 61.626 63.158 0.00 0.00 0.00 4.85
96 97 1.380380 CATTTCTCCCCCACCCAGC 60.380 63.158 0.00 0.00 0.00 4.85
97 98 1.307647 CCATTTCTCCCCCACCCAG 59.692 63.158 0.00 0.00 0.00 4.45
98 99 2.245379 CCCATTTCTCCCCCACCCA 61.245 63.158 0.00 0.00 0.00 4.51
99 100 2.246126 ACCCATTTCTCCCCCACCC 61.246 63.158 0.00 0.00 0.00 4.61
100 101 1.000359 CACCCATTTCTCCCCCACC 60.000 63.158 0.00 0.00 0.00 4.61
101 102 1.000359 CCACCCATTTCTCCCCCAC 60.000 63.158 0.00 0.00 0.00 4.61
102 103 2.245379 CCCACCCATTTCTCCCCCA 61.245 63.158 0.00 0.00 0.00 4.96
103 104 2.689813 CCCACCCATTTCTCCCCC 59.310 66.667 0.00 0.00 0.00 5.40
104 105 2.689813 CCCCACCCATTTCTCCCC 59.310 66.667 0.00 0.00 0.00 4.81
105 106 2.689813 CCCCCACCCATTTCTCCC 59.310 66.667 0.00 0.00 0.00 4.30
106 107 2.042944 GCCCCCACCCATTTCTCC 60.043 66.667 0.00 0.00 0.00 3.71
107 108 2.440247 CGCCCCCACCCATTTCTC 60.440 66.667 0.00 0.00 0.00 2.87
108 109 4.060667 CCGCCCCCACCCATTTCT 62.061 66.667 0.00 0.00 0.00 2.52
127 128 1.003851 CATATATAAACCGCGGGCCG 58.996 55.000 31.76 24.35 0.00 6.13
128 129 2.004733 GACATATATAAACCGCGGGCC 58.995 52.381 31.76 0.00 0.00 5.80
129 130 2.004733 GGACATATATAAACCGCGGGC 58.995 52.381 31.76 0.00 0.00 6.13
130 131 2.997986 GTGGACATATATAAACCGCGGG 59.002 50.000 31.76 11.88 0.00 6.13
131 132 3.430895 GTGTGGACATATATAAACCGCGG 59.569 47.826 26.86 26.86 34.39 6.46
132 133 3.430895 GGTGTGGACATATATAAACCGCG 59.569 47.826 0.00 0.00 34.39 6.46
133 134 3.749609 GGGTGTGGACATATATAAACCGC 59.250 47.826 0.00 0.00 0.00 5.68
134 135 5.223449 AGGGTGTGGACATATATAAACCG 57.777 43.478 0.00 0.00 0.00 4.44
135 136 6.470278 GGTAGGGTGTGGACATATATAAACC 58.530 44.000 0.00 0.00 0.00 3.27
136 137 6.161381 CGGTAGGGTGTGGACATATATAAAC 58.839 44.000 0.00 0.00 0.00 2.01
137 138 5.279607 GCGGTAGGGTGTGGACATATATAAA 60.280 44.000 0.00 0.00 0.00 1.40
138 139 4.221262 GCGGTAGGGTGTGGACATATATAA 59.779 45.833 0.00 0.00 0.00 0.98
139 140 3.765511 GCGGTAGGGTGTGGACATATATA 59.234 47.826 0.00 0.00 0.00 0.86
140 141 2.565834 GCGGTAGGGTGTGGACATATAT 59.434 50.000 0.00 0.00 0.00 0.86
141 142 1.965643 GCGGTAGGGTGTGGACATATA 59.034 52.381 0.00 0.00 0.00 0.86
142 143 0.756903 GCGGTAGGGTGTGGACATAT 59.243 55.000 0.00 0.00 0.00 1.78
143 144 1.332144 GGCGGTAGGGTGTGGACATA 61.332 60.000 0.00 0.00 0.00 2.29
144 145 2.666098 GGCGGTAGGGTGTGGACAT 61.666 63.158 0.00 0.00 0.00 3.06
145 146 3.315949 GGCGGTAGGGTGTGGACA 61.316 66.667 0.00 0.00 0.00 4.02
146 147 4.446413 CGGCGGTAGGGTGTGGAC 62.446 72.222 0.00 0.00 0.00 4.02
149 150 4.143333 CTCCGGCGGTAGGGTGTG 62.143 72.222 27.32 0.00 0.00 3.82
150 151 4.371417 TCTCCGGCGGTAGGGTGT 62.371 66.667 27.32 0.00 0.00 4.16
151 152 3.834799 GTCTCCGGCGGTAGGGTG 61.835 72.222 27.32 10.22 0.00 4.61
152 153 4.057943 AGTCTCCGGCGGTAGGGT 62.058 66.667 27.32 9.69 0.00 4.34
153 154 3.217743 GAGTCTCCGGCGGTAGGG 61.218 72.222 27.32 14.36 0.00 3.53
154 155 2.124236 AGAGTCTCCGGCGGTAGG 60.124 66.667 27.32 16.86 0.00 3.18
155 156 1.451567 TCAGAGTCTCCGGCGGTAG 60.452 63.158 27.32 20.80 0.00 3.18
156 157 1.748122 GTCAGAGTCTCCGGCGGTA 60.748 63.158 27.32 12.96 0.00 4.02
157 158 3.063084 GTCAGAGTCTCCGGCGGT 61.063 66.667 27.32 6.05 0.00 5.68
158 159 4.180946 CGTCAGAGTCTCCGGCGG 62.181 72.222 22.51 22.51 0.00 6.13
159 160 4.180946 CCGTCAGAGTCTCCGGCG 62.181 72.222 13.31 3.00 33.20 6.46
160 161 1.716826 CTACCGTCAGAGTCTCCGGC 61.717 65.000 21.97 0.35 44.14 6.13
161 162 1.096386 CCTACCGTCAGAGTCTCCGG 61.096 65.000 20.91 20.91 45.72 5.14
162 163 0.392729 ACCTACCGTCAGAGTCTCCG 60.393 60.000 0.00 0.00 0.00 4.63
163 164 1.744522 GAACCTACCGTCAGAGTCTCC 59.255 57.143 0.00 0.00 0.00 3.71
164 165 2.420722 CTGAACCTACCGTCAGAGTCTC 59.579 54.545 0.00 0.00 32.38 3.36
165 166 2.040012 TCTGAACCTACCGTCAGAGTCT 59.960 50.000 0.00 0.00 34.70 3.24
166 167 2.162008 GTCTGAACCTACCGTCAGAGTC 59.838 54.545 3.68 0.00 39.53 3.36
167 168 2.161030 GTCTGAACCTACCGTCAGAGT 58.839 52.381 3.68 0.00 39.53 3.24
168 169 2.160205 TGTCTGAACCTACCGTCAGAG 58.840 52.381 3.68 0.00 39.53 3.35
169 170 2.281539 TGTCTGAACCTACCGTCAGA 57.718 50.000 0.00 0.00 36.95 3.27
170 171 2.609737 GGTTGTCTGAACCTACCGTCAG 60.610 54.545 0.00 0.00 37.34 3.51
171 172 1.342174 GGTTGTCTGAACCTACCGTCA 59.658 52.381 0.00 0.00 37.34 4.35
172 173 2.075979 GGTTGTCTGAACCTACCGTC 57.924 55.000 0.00 0.00 37.34 4.79
179 180 0.672711 GGCGGTAGGTTGTCTGAACC 60.673 60.000 0.00 0.00 40.58 3.62
180 181 1.012486 CGGCGGTAGGTTGTCTGAAC 61.012 60.000 0.00 0.00 0.00 3.18
181 182 1.290955 CGGCGGTAGGTTGTCTGAA 59.709 57.895 0.00 0.00 0.00 3.02
182 183 2.642254 CCGGCGGTAGGTTGTCTGA 61.642 63.158 19.97 0.00 0.00 3.27
183 184 2.125673 CCGGCGGTAGGTTGTCTG 60.126 66.667 19.97 0.00 0.00 3.51
184 185 3.387947 CCCGGCGGTAGGTTGTCT 61.388 66.667 26.32 0.00 0.00 3.41
207 208 4.789075 CGTCACACCCTACCGCCG 62.789 72.222 0.00 0.00 0.00 6.46
208 209 4.446413 CCGTCACACCCTACCGCC 62.446 72.222 0.00 0.00 0.00 6.13
209 210 4.446413 CCCGTCACACCCTACCGC 62.446 72.222 0.00 0.00 0.00 5.68
210 211 3.766691 CCCCGTCACACCCTACCG 61.767 72.222 0.00 0.00 0.00 4.02
211 212 3.396570 CCCCCGTCACACCCTACC 61.397 72.222 0.00 0.00 0.00 3.18
226 227 3.692370 ATAACTGCCGCCGTTCCCC 62.692 63.158 3.18 0.00 0.00 4.81
227 228 2.124860 ATAACTGCCGCCGTTCCC 60.125 61.111 3.18 0.00 0.00 3.97
228 229 2.522638 CGATAACTGCCGCCGTTCC 61.523 63.158 3.18 0.00 0.00 3.62
229 230 2.522638 CCGATAACTGCCGCCGTTC 61.523 63.158 3.18 0.00 0.00 3.95
230 231 2.510691 CCGATAACTGCCGCCGTT 60.511 61.111 5.47 5.47 0.00 4.44
235 236 3.630148 CAGCGCCGATAACTGCCG 61.630 66.667 2.29 0.00 0.00 5.69
236 237 2.202878 TCAGCGCCGATAACTGCC 60.203 61.111 2.29 0.00 0.00 4.85
237 238 2.860628 CGTCAGCGCCGATAACTGC 61.861 63.158 2.29 0.00 0.00 4.40
238 239 1.516386 ACGTCAGCGCCGATAACTG 60.516 57.895 11.49 0.00 42.83 3.16
239 240 1.516386 CACGTCAGCGCCGATAACT 60.516 57.895 11.49 0.00 42.83 2.24
240 241 2.514013 CCACGTCAGCGCCGATAAC 61.514 63.158 11.49 0.00 42.83 1.89
241 242 2.202690 CCACGTCAGCGCCGATAA 60.203 61.111 11.49 0.00 42.83 1.75
242 243 2.215465 TTTCCACGTCAGCGCCGATA 62.215 55.000 11.49 0.00 42.83 2.92
243 244 3.583276 TTTCCACGTCAGCGCCGAT 62.583 57.895 11.49 0.00 42.83 4.18
244 245 3.793775 TTTTCCACGTCAGCGCCGA 62.794 57.895 11.49 0.00 42.83 5.54
245 246 3.295228 CTTTTCCACGTCAGCGCCG 62.295 63.158 2.29 2.67 42.83 6.46
246 247 1.782028 AACTTTTCCACGTCAGCGCC 61.782 55.000 2.29 0.00 42.83 6.53
247 248 0.028902 AAACTTTTCCACGTCAGCGC 59.971 50.000 0.00 0.00 42.83 5.92
248 249 1.741993 CAAACTTTTCCACGTCAGCG 58.258 50.000 0.00 0.00 44.93 5.18
249 250 1.065551 AGCAAACTTTTCCACGTCAGC 59.934 47.619 0.00 0.00 0.00 4.26
250 251 3.303791 GGTAGCAAACTTTTCCACGTCAG 60.304 47.826 0.00 0.00 0.00 3.51
251 252 2.614983 GGTAGCAAACTTTTCCACGTCA 59.385 45.455 0.00 0.00 0.00 4.35
252 253 2.349155 CGGTAGCAAACTTTTCCACGTC 60.349 50.000 0.00 0.00 0.00 4.34
253 254 1.600485 CGGTAGCAAACTTTTCCACGT 59.400 47.619 0.00 0.00 0.00 4.49
254 255 1.662026 GCGGTAGCAAACTTTTCCACG 60.662 52.381 0.00 0.00 44.35 4.94
255 256 2.046283 GCGGTAGCAAACTTTTCCAC 57.954 50.000 0.00 0.00 44.35 4.02
267 268 2.403586 GAACATTGCGGCGGTAGC 59.596 61.111 9.78 0.00 44.18 3.58
268 269 2.701006 CGAACATTGCGGCGGTAG 59.299 61.111 9.78 0.00 0.00 3.18
269 270 2.816083 CCGAACATTGCGGCGGTA 60.816 61.111 9.78 0.00 42.55 4.02
275 276 1.977594 GCCTACCACCGAACATTGCG 61.978 60.000 0.00 0.00 0.00 4.85
276 277 0.676782 AGCCTACCACCGAACATTGC 60.677 55.000 0.00 0.00 0.00 3.56
277 278 2.684001 TAGCCTACCACCGAACATTG 57.316 50.000 0.00 0.00 0.00 2.82
278 279 3.243636 CGTATAGCCTACCACCGAACATT 60.244 47.826 0.00 0.00 0.00 2.71
279 280 2.295349 CGTATAGCCTACCACCGAACAT 59.705 50.000 0.00 0.00 0.00 2.71
280 281 1.677576 CGTATAGCCTACCACCGAACA 59.322 52.381 0.00 0.00 0.00 3.18
281 282 1.949525 TCGTATAGCCTACCACCGAAC 59.050 52.381 0.00 0.00 0.00 3.95
282 283 2.346766 TCGTATAGCCTACCACCGAA 57.653 50.000 0.00 0.00 0.00 4.30
283 284 2.430465 GATCGTATAGCCTACCACCGA 58.570 52.381 0.00 0.00 0.00 4.69
284 285 1.471684 GGATCGTATAGCCTACCACCG 59.528 57.143 0.00 0.00 0.00 4.94
285 286 2.805194 AGGATCGTATAGCCTACCACC 58.195 52.381 0.00 0.00 44.19 4.61
290 291 2.636830 GCGGTAGGATCGTATAGCCTA 58.363 52.381 11.58 0.00 44.19 3.93
292 293 0.455005 GGCGGTAGGATCGTATAGCC 59.545 60.000 20.52 20.52 36.32 3.93
293 294 0.098376 CGGCGGTAGGATCGTATAGC 59.902 60.000 0.00 13.31 0.00 2.97
294 295 0.731417 CCGGCGGTAGGATCGTATAG 59.269 60.000 19.97 0.00 0.00 1.31
295 296 0.677731 CCCGGCGGTAGGATCGTATA 60.678 60.000 26.32 0.00 0.00 1.47
296 297 1.975407 CCCGGCGGTAGGATCGTAT 60.975 63.158 26.32 0.00 0.00 3.06
297 298 2.595463 CCCGGCGGTAGGATCGTA 60.595 66.667 26.32 0.00 0.00 3.43
304 305 4.530857 CAAGAGGCCCGGCGGTAG 62.531 72.222 26.32 11.84 0.00 3.18
310 311 3.006728 TACCACCAAGAGGCCCGG 61.007 66.667 0.00 0.00 39.06 5.73
311 312 2.584608 CTACCACCAAGAGGCCCG 59.415 66.667 0.00 0.00 39.06 6.13
312 313 2.998949 CCTACCACCAAGAGGCCC 59.001 66.667 0.00 0.00 39.06 5.80
315 316 2.162681 CTTTTGCCTACCACCAAGAGG 58.837 52.381 0.00 0.00 42.21 3.69
316 317 2.162681 CCTTTTGCCTACCACCAAGAG 58.837 52.381 0.00 0.00 0.00 2.85
317 318 1.203001 CCCTTTTGCCTACCACCAAGA 60.203 52.381 0.00 0.00 0.00 3.02
318 319 1.256812 CCCTTTTGCCTACCACCAAG 58.743 55.000 0.00 0.00 0.00 3.61
319 320 0.558712 ACCCTTTTGCCTACCACCAA 59.441 50.000 0.00 0.00 0.00 3.67
320 321 0.111639 GACCCTTTTGCCTACCACCA 59.888 55.000 0.00 0.00 0.00 4.17
321 322 0.111639 TGACCCTTTTGCCTACCACC 59.888 55.000 0.00 0.00 0.00 4.61
322 323 1.989706 TTGACCCTTTTGCCTACCAC 58.010 50.000 0.00 0.00 0.00 4.16
323 324 2.757894 TTTGACCCTTTTGCCTACCA 57.242 45.000 0.00 0.00 0.00 3.25
324 325 2.496070 GGATTTGACCCTTTTGCCTACC 59.504 50.000 0.00 0.00 0.00 3.18
325 326 3.193479 CAGGATTTGACCCTTTTGCCTAC 59.807 47.826 0.00 0.00 0.00 3.18
326 327 3.075283 TCAGGATTTGACCCTTTTGCCTA 59.925 43.478 0.00 0.00 0.00 3.93
327 328 2.158325 TCAGGATTTGACCCTTTTGCCT 60.158 45.455 0.00 0.00 0.00 4.75
328 329 2.247358 TCAGGATTTGACCCTTTTGCC 58.753 47.619 0.00 0.00 0.00 4.52
329 330 4.335400 TTTCAGGATTTGACCCTTTTGC 57.665 40.909 0.00 0.00 34.94 3.68
330 331 9.506018 AAAATATTTCAGGATTTGACCCTTTTG 57.494 29.630 0.10 0.00 34.94 2.44
331 332 9.725019 GAAAATATTTCAGGATTTGACCCTTTT 57.275 29.630 0.10 0.00 34.94 2.27
332 333 8.879227 TGAAAATATTTCAGGATTTGACCCTTT 58.121 29.630 0.10 0.00 34.94 3.11
333 334 8.434589 TGAAAATATTTCAGGATTTGACCCTT 57.565 30.769 0.10 0.00 34.94 3.95
334 335 7.895429 TCTGAAAATATTTCAGGATTTGACCCT 59.105 33.333 24.73 0.00 44.43 4.34
335 336 7.976175 GTCTGAAAATATTTCAGGATTTGACCC 59.024 37.037 24.73 6.10 44.43 4.46
336 337 8.743714 AGTCTGAAAATATTTCAGGATTTGACC 58.256 33.333 24.73 9.21 44.43 4.02
337 338 9.565213 CAGTCTGAAAATATTTCAGGATTTGAC 57.435 33.333 24.73 17.17 44.43 3.18
338 339 8.742777 CCAGTCTGAAAATATTTCAGGATTTGA 58.257 33.333 24.73 8.77 44.43 2.69
339 340 7.977853 CCCAGTCTGAAAATATTTCAGGATTTG 59.022 37.037 24.73 18.32 44.43 2.32
340 341 7.124750 CCCCAGTCTGAAAATATTTCAGGATTT 59.875 37.037 24.73 11.00 44.43 2.17
341 342 6.608808 CCCCAGTCTGAAAATATTTCAGGATT 59.391 38.462 24.73 12.82 44.43 3.01
342 343 6.131961 CCCCAGTCTGAAAATATTTCAGGAT 58.868 40.000 24.73 14.96 44.43 3.24
343 344 5.015178 ACCCCAGTCTGAAAATATTTCAGGA 59.985 40.000 24.73 13.57 44.43 3.86
344 345 5.264395 ACCCCAGTCTGAAAATATTTCAGG 58.736 41.667 24.73 15.14 44.43 3.86
345 346 5.945784 TGACCCCAGTCTGAAAATATTTCAG 59.054 40.000 21.22 21.22 45.38 3.02
346 347 5.886609 TGACCCCAGTCTGAAAATATTTCA 58.113 37.500 0.00 5.50 43.91 2.69
347 348 6.180472 TCTGACCCCAGTCTGAAAATATTTC 58.820 40.000 0.00 0.00 44.95 2.17
348 349 6.139679 TCTGACCCCAGTCTGAAAATATTT 57.860 37.500 0.00 0.00 44.95 1.40
349 350 5.779241 TCTGACCCCAGTCTGAAAATATT 57.221 39.130 0.00 0.00 44.95 1.28
357 358 0.743688 CGAGATCTGACCCCAGTCTG 59.256 60.000 0.00 0.00 43.91 3.51
358 359 0.626382 TCGAGATCTGACCCCAGTCT 59.374 55.000 0.00 0.00 43.91 3.24
359 360 1.698506 ATCGAGATCTGACCCCAGTC 58.301 55.000 0.00 0.00 43.83 3.51
360 361 2.166907 AATCGAGATCTGACCCCAGT 57.833 50.000 0.00 0.00 41.16 4.00
361 362 3.201290 CAAAATCGAGATCTGACCCCAG 58.799 50.000 0.00 0.00 41.74 4.45
362 363 2.571653 ACAAAATCGAGATCTGACCCCA 59.428 45.455 0.00 0.00 0.00 4.96
363 364 3.268023 ACAAAATCGAGATCTGACCCC 57.732 47.619 0.00 0.00 0.00 4.95
364 365 4.695455 TGAAACAAAATCGAGATCTGACCC 59.305 41.667 0.00 0.00 0.00 4.46
365 366 5.622378 GTGAAACAAAATCGAGATCTGACC 58.378 41.667 0.00 0.00 36.32 4.02
366 367 5.118664 TCGTGAAACAAAATCGAGATCTGAC 59.881 40.000 0.00 0.00 35.74 3.51
367 368 5.227152 TCGTGAAACAAAATCGAGATCTGA 58.773 37.500 0.00 0.00 35.74 3.27
368 369 5.515548 TCGTGAAACAAAATCGAGATCTG 57.484 39.130 0.00 0.00 35.74 2.90
369 370 6.347725 CCTTTCGTGAAACAAAATCGAGATCT 60.348 38.462 0.00 0.00 35.74 2.75
370 371 5.790495 CCTTTCGTGAAACAAAATCGAGATC 59.210 40.000 0.00 0.00 35.74 2.75
371 372 5.334879 CCCTTTCGTGAAACAAAATCGAGAT 60.335 40.000 0.00 0.00 35.74 2.75
372 373 4.024387 CCCTTTCGTGAAACAAAATCGAGA 60.024 41.667 0.00 0.00 35.74 4.04
373 374 4.219033 CCCTTTCGTGAAACAAAATCGAG 58.781 43.478 0.00 0.00 35.74 4.04
374 375 3.628487 ACCCTTTCGTGAAACAAAATCGA 59.372 39.130 0.00 0.00 35.74 3.59
375 376 3.959943 ACCCTTTCGTGAAACAAAATCG 58.040 40.909 0.00 0.00 35.74 3.34
376 377 4.927422 TGACCCTTTCGTGAAACAAAATC 58.073 39.130 0.00 0.00 35.74 2.17
377 378 4.993029 TGACCCTTTCGTGAAACAAAAT 57.007 36.364 0.00 0.00 35.74 1.82
378 379 4.785511 TTGACCCTTTCGTGAAACAAAA 57.214 36.364 0.00 0.00 35.74 2.44
379 380 4.785511 TTTGACCCTTTCGTGAAACAAA 57.214 36.364 5.32 5.32 35.74 2.83
380 381 4.022242 TGTTTTGACCCTTTCGTGAAACAA 60.022 37.500 0.00 0.00 34.16 2.83
381 382 3.506455 TGTTTTGACCCTTTCGTGAAACA 59.494 39.130 0.00 0.00 35.74 2.83
382 383 3.855379 GTGTTTTGACCCTTTCGTGAAAC 59.145 43.478 0.00 0.00 0.00 2.78
383 384 3.426426 CGTGTTTTGACCCTTTCGTGAAA 60.426 43.478 0.00 0.00 0.00 2.69
384 385 2.096174 CGTGTTTTGACCCTTTCGTGAA 59.904 45.455 0.00 0.00 0.00 3.18
385 386 1.666700 CGTGTTTTGACCCTTTCGTGA 59.333 47.619 0.00 0.00 0.00 4.35
386 387 1.666700 TCGTGTTTTGACCCTTTCGTG 59.333 47.619 0.00 0.00 0.00 4.35
387 388 2.027003 TCGTGTTTTGACCCTTTCGT 57.973 45.000 0.00 0.00 0.00 3.85
388 389 3.408288 TTTCGTGTTTTGACCCTTTCG 57.592 42.857 0.00 0.00 0.00 3.46
389 390 6.474364 CAAAATTTCGTGTTTTGACCCTTTC 58.526 36.000 13.46 0.00 45.02 2.62
390 391 5.163804 GCAAAATTTCGTGTTTTGACCCTTT 60.164 36.000 19.19 0.00 45.02 3.11
391 392 4.331443 GCAAAATTTCGTGTTTTGACCCTT 59.669 37.500 19.19 0.00 45.02 3.95
392 393 3.868661 GCAAAATTTCGTGTTTTGACCCT 59.131 39.130 19.19 0.00 45.02 4.34
393 394 3.302156 CGCAAAATTTCGTGTTTTGACCC 60.302 43.478 19.19 7.32 45.02 4.46
394 395 3.304826 ACGCAAAATTTCGTGTTTTGACC 59.695 39.130 19.19 7.79 45.02 4.02
395 396 4.493074 ACGCAAAATTTCGTGTTTTGAC 57.507 36.364 19.19 12.53 45.02 3.18
403 404 0.932585 CGGTGCACGCAAAATTTCGT 60.933 50.000 11.45 0.00 39.79 3.85
404 405 1.766176 CGGTGCACGCAAAATTTCG 59.234 52.632 11.45 1.05 34.82 3.46
470 475 0.167470 CATTTGCCAGTCGAGCTGTG 59.833 55.000 0.00 6.67 43.55 3.66
502 507 0.036952 ACTCGCATGACCTCTGTTGG 60.037 55.000 0.00 0.00 0.00 3.77
565 571 0.179029 AACCTAACGCTGCCTTGTGT 60.179 50.000 0.00 0.00 0.00 3.72
576 582 3.097910 CGCAATGCAATGTAACCTAACG 58.902 45.455 5.91 0.00 0.00 3.18
593 599 7.059831 CGTATTATATACTTACTCGCAACGCAA 59.940 37.037 0.00 0.00 0.00 4.85
594 600 6.520790 CGTATTATATACTTACTCGCAACGCA 59.479 38.462 0.00 0.00 0.00 5.24
595 601 6.021939 CCGTATTATATACTTACTCGCAACGC 60.022 42.308 0.00 0.00 0.00 4.84
596 602 6.467047 CCCGTATTATATACTTACTCGCAACG 59.533 42.308 0.00 0.00 0.00 4.10
597 603 7.530010 TCCCGTATTATATACTTACTCGCAAC 58.470 38.462 0.00 0.00 0.00 4.17
612 618 6.650120 ACATGTCTGTCTTTTCCCGTATTAT 58.350 36.000 0.00 0.00 0.00 1.28
618 624 2.484264 GGAACATGTCTGTCTTTTCCCG 59.516 50.000 0.00 0.00 33.36 5.14
758 764 1.674057 CTTTGCGGACCCTGTCTCT 59.326 57.895 0.00 0.00 32.47 3.10
759 765 2.035442 GCTTTGCGGACCCTGTCTC 61.035 63.158 0.00 0.00 32.47 3.36
804 810 1.076677 GGGGATGATGGATGAATGGCT 59.923 52.381 0.00 0.00 0.00 4.75
805 811 1.076677 AGGGGATGATGGATGAATGGC 59.923 52.381 0.00 0.00 0.00 4.40
810 821 2.342659 GAGGAAGGGGATGATGGATGA 58.657 52.381 0.00 0.00 0.00 2.92
834 845 0.619832 AGAGGGAAGAGGCAGCATCA 60.620 55.000 10.23 0.00 0.00 3.07
836 847 0.255318 CAAGAGGGAAGAGGCAGCAT 59.745 55.000 0.00 0.00 0.00 3.79
842 853 3.008923 AGAAAGAAGCAAGAGGGAAGAGG 59.991 47.826 0.00 0.00 0.00 3.69
843 854 4.284829 AGAAAGAAGCAAGAGGGAAGAG 57.715 45.455 0.00 0.00 0.00 2.85
844 855 4.349342 AGAAGAAAGAAGCAAGAGGGAAGA 59.651 41.667 0.00 0.00 0.00 2.87
845 856 4.650734 AGAAGAAAGAAGCAAGAGGGAAG 58.349 43.478 0.00 0.00 0.00 3.46
846 857 4.713792 AGAAGAAAGAAGCAAGAGGGAA 57.286 40.909 0.00 0.00 0.00 3.97
847 858 4.646572 GAAGAAGAAAGAAGCAAGAGGGA 58.353 43.478 0.00 0.00 0.00 4.20
848 859 3.434984 CGAAGAAGAAAGAAGCAAGAGGG 59.565 47.826 0.00 0.00 0.00 4.30
902 924 2.351544 GCAAGCAAGCAAGGAGAGAAAG 60.352 50.000 0.00 0.00 0.00 2.62
943 965 6.648192 ACTCTACGTACAACACCTATCTACT 58.352 40.000 0.00 0.00 0.00 2.57
965 987 2.802719 GCTGCCTATCTAGCTCCTACT 58.197 52.381 0.00 0.00 36.99 2.57
966 988 1.470890 CGCTGCCTATCTAGCTCCTAC 59.529 57.143 0.00 0.00 37.78 3.18
1038 1066 1.139095 CGAGAAGTAGACCGGCACC 59.861 63.158 0.00 0.00 0.00 5.01
1077 1105 0.033504 AGTACTGTGCGTTGGTCAGG 59.966 55.000 0.00 0.00 34.02 3.86
1089 1117 1.003718 GCCGAGCCCAAAGTACTGT 60.004 57.895 0.00 0.00 0.00 3.55
1451 1479 5.011738 AGGAGAATGAAAAACGTAGGAGTGA 59.988 40.000 0.00 0.00 0.00 3.41
1452 1480 5.120830 CAGGAGAATGAAAAACGTAGGAGTG 59.879 44.000 0.00 0.00 0.00 3.51
1453 1481 5.221661 ACAGGAGAATGAAAAACGTAGGAGT 60.222 40.000 0.00 0.00 0.00 3.85
1454 1482 5.238583 ACAGGAGAATGAAAAACGTAGGAG 58.761 41.667 0.00 0.00 0.00 3.69
1455 1483 5.223449 ACAGGAGAATGAAAAACGTAGGA 57.777 39.130 0.00 0.00 0.00 2.94
1456 1484 4.392138 GGACAGGAGAATGAAAAACGTAGG 59.608 45.833 0.00 0.00 0.00 3.18
1457 1485 5.120830 CAGGACAGGAGAATGAAAAACGTAG 59.879 44.000 0.00 0.00 0.00 3.51
1458 1486 4.994852 CAGGACAGGAGAATGAAAAACGTA 59.005 41.667 0.00 0.00 0.00 3.57
1459 1487 3.815401 CAGGACAGGAGAATGAAAAACGT 59.185 43.478 0.00 0.00 0.00 3.99
1460 1488 4.065088 TCAGGACAGGAGAATGAAAAACG 58.935 43.478 0.00 0.00 0.00 3.60
1461 1489 5.049129 CACTCAGGACAGGAGAATGAAAAAC 60.049 44.000 0.00 0.00 36.26 2.43
1462 1490 5.065914 CACTCAGGACAGGAGAATGAAAAA 58.934 41.667 0.00 0.00 36.26 1.94
1463 1491 4.347876 TCACTCAGGACAGGAGAATGAAAA 59.652 41.667 0.00 0.00 36.26 2.29
1464 1492 3.903714 TCACTCAGGACAGGAGAATGAAA 59.096 43.478 0.00 0.00 36.26 2.69
1466 1494 3.175438 TCACTCAGGACAGGAGAATGA 57.825 47.619 0.00 0.00 36.26 2.57
1471 1499 2.230992 CTCACTTCACTCAGGACAGGAG 59.769 54.545 0.00 0.00 38.36 3.69
1476 1504 3.417101 TCTCTCTCACTTCACTCAGGAC 58.583 50.000 0.00 0.00 0.00 3.85
1477 1505 3.797559 TCTCTCTCACTTCACTCAGGA 57.202 47.619 0.00 0.00 0.00 3.86
1482 1519 4.314121 GCAAACATCTCTCTCACTTCACT 58.686 43.478 0.00 0.00 0.00 3.41
1483 1520 3.122613 CGCAAACATCTCTCTCACTTCAC 59.877 47.826 0.00 0.00 0.00 3.18
1484 1521 3.320626 CGCAAACATCTCTCTCACTTCA 58.679 45.455 0.00 0.00 0.00 3.02
1485 1522 2.093467 GCGCAAACATCTCTCTCACTTC 59.907 50.000 0.30 0.00 0.00 3.01
1486 1523 2.072298 GCGCAAACATCTCTCTCACTT 58.928 47.619 0.30 0.00 0.00 3.16
1487 1524 1.001293 TGCGCAAACATCTCTCTCACT 59.999 47.619 8.16 0.00 0.00 3.41
1488 1525 1.127582 GTGCGCAAACATCTCTCTCAC 59.872 52.381 14.00 0.00 0.00 3.51
1489 1526 1.001293 AGTGCGCAAACATCTCTCTCA 59.999 47.619 14.00 0.00 0.00 3.27
1490 1527 1.392853 CAGTGCGCAAACATCTCTCTC 59.607 52.381 14.00 0.00 0.00 3.20
1491 1528 1.436600 CAGTGCGCAAACATCTCTCT 58.563 50.000 14.00 0.00 0.00 3.10
1492 1529 0.445436 CCAGTGCGCAAACATCTCTC 59.555 55.000 14.00 0.00 0.00 3.20
1493 1530 0.035317 TCCAGTGCGCAAACATCTCT 59.965 50.000 14.00 0.00 0.00 3.10
1494 1531 1.089920 ATCCAGTGCGCAAACATCTC 58.910 50.000 14.00 0.00 0.00 2.75
1495 1532 1.200716 CAATCCAGTGCGCAAACATCT 59.799 47.619 14.00 0.23 0.00 2.90
1496 1533 1.199789 TCAATCCAGTGCGCAAACATC 59.800 47.619 14.00 0.00 0.00 3.06
1527 1572 1.901833 ACCTGCAATCCCATTTGTTCC 59.098 47.619 0.00 0.00 0.00 3.62
1537 1582 1.222115 GGATACGCGACCTGCAATCC 61.222 60.000 15.93 9.20 46.97 3.01
1548 1593 0.389391 AGATGTCCTTGGGATACGCG 59.611 55.000 3.53 3.53 32.73 6.01
1600 1645 2.102578 GAAGTTGTAGGCCCGGTAGTA 58.897 52.381 0.00 0.00 0.00 1.82
1611 1656 5.947228 ACATGTTGATGGTGAAGTTGTAG 57.053 39.130 0.00 0.00 33.39 2.74
1938 1986 4.096003 ACGATCACCCGCCCCTTG 62.096 66.667 0.00 0.00 0.00 3.61
2271 2319 2.223803 AGAGGTCGTTCCAGATGTCT 57.776 50.000 2.77 0.00 39.02 3.41
2307 2355 1.001145 AACGGGACTCGGCTAGACT 60.001 57.895 0.00 0.00 44.45 3.24
2429 2486 0.974010 ATCGACCGGTAGCAGGGAAA 60.974 55.000 7.34 0.00 0.00 3.13
2463 2523 1.545582 CCACCACACCCATCAATCAAC 59.454 52.381 0.00 0.00 0.00 3.18
2485 2545 1.217244 GGCGTCGTCCATGGTTACT 59.783 57.895 12.58 0.00 0.00 2.24
2491 2551 0.591170 AAAAGTTGGCGTCGTCCATG 59.409 50.000 8.83 0.00 35.77 3.66
2656 2758 0.394565 GAACTCAGAGCCACCACAGT 59.605 55.000 0.00 0.00 0.00 3.55
2657 2759 0.683973 AGAACTCAGAGCCACCACAG 59.316 55.000 0.00 0.00 0.00 3.66
2658 2760 0.394192 CAGAACTCAGAGCCACCACA 59.606 55.000 0.00 0.00 0.00 4.17
2659 2761 0.681733 TCAGAACTCAGAGCCACCAC 59.318 55.000 0.00 0.00 0.00 4.16
2660 2762 0.681733 GTCAGAACTCAGAGCCACCA 59.318 55.000 0.00 0.00 0.00 4.17
2694 2796 1.016130 GCGATCCATCCATACGCAGG 61.016 60.000 0.00 0.00 46.75 4.85
2751 2853 0.886490 AGTGCACCGCCTCTTCTTTG 60.886 55.000 14.63 0.00 0.00 2.77
2756 2858 4.254709 TGCAGTGCACCGCCTCTT 62.255 61.111 21.86 0.00 31.71 2.85
2797 2899 1.357334 GGCGCGAGAGTAAGAGAGG 59.643 63.158 12.10 0.00 0.00 3.69
2825 2927 6.757947 CCAACACAAACAAATTCATTCACTCT 59.242 34.615 0.00 0.00 0.00 3.24
2878 2988 2.298729 GCAGAGGTTGAGACTTGAGAGT 59.701 50.000 0.00 0.00 39.32 3.24
2879 2989 2.298446 TGCAGAGGTTGAGACTTGAGAG 59.702 50.000 0.00 0.00 0.00 3.20
2880 2990 2.036475 GTGCAGAGGTTGAGACTTGAGA 59.964 50.000 0.00 0.00 0.00 3.27
2881 2991 2.411904 GTGCAGAGGTTGAGACTTGAG 58.588 52.381 0.00 0.00 0.00 3.02
2882 2992 1.269778 CGTGCAGAGGTTGAGACTTGA 60.270 52.381 0.00 0.00 0.00 3.02
2883 2993 1.143305 CGTGCAGAGGTTGAGACTTG 58.857 55.000 0.00 0.00 0.00 3.16
2884 2994 0.601311 GCGTGCAGAGGTTGAGACTT 60.601 55.000 0.00 0.00 0.00 3.01
2885 2995 1.005630 GCGTGCAGAGGTTGAGACT 60.006 57.895 0.00 0.00 0.00 3.24
2886 2996 1.005630 AGCGTGCAGAGGTTGAGAC 60.006 57.895 0.00 0.00 0.00 3.36
2887 2997 1.005748 CAGCGTGCAGAGGTTGAGA 60.006 57.895 0.00 0.00 0.00 3.27
2888 2998 2.675056 GCAGCGTGCAGAGGTTGAG 61.675 63.158 5.30 0.00 44.26 3.02
2889 2999 2.666190 GCAGCGTGCAGAGGTTGA 60.666 61.111 5.30 0.00 44.26 3.18
2932 3043 1.376037 GCCGGCAGCCATATAGGTC 60.376 63.158 24.80 0.00 40.61 3.85
2933 3044 1.843376 AGCCGGCAGCCATATAGGT 60.843 57.895 31.54 0.00 45.47 3.08
2934 3045 1.376424 CAGCCGGCAGCCATATAGG 60.376 63.158 31.54 4.96 45.47 2.57
2935 3046 1.376424 CCAGCCGGCAGCCATATAG 60.376 63.158 31.54 1.31 45.47 1.31
2936 3047 2.749682 CCAGCCGGCAGCCATATA 59.250 61.111 31.54 0.00 45.47 0.86
2995 3106 2.508439 CGTTACGGAGCGTGCCAT 60.508 61.111 0.00 0.00 41.39 4.40
3032 3273 2.101770 GGCCGTACGTTCTCTCCG 59.898 66.667 15.21 0.00 0.00 4.63
3033 3274 2.101770 CGGCCGTACGTTCTCTCC 59.898 66.667 19.50 4.45 0.00 3.71
3034 3275 2.101770 CCGGCCGTACGTTCTCTC 59.898 66.667 26.12 0.00 0.00 3.20
3110 3358 4.338710 GTGCGCCACCCACCCTAA 62.339 66.667 4.18 0.00 0.00 2.69
3150 3398 2.034879 GTCGTGGCTGTGGTGATGG 61.035 63.158 0.00 0.00 0.00 3.51
3180 3435 2.533037 TACCCCGGTGATGTAGCCCA 62.533 60.000 0.00 0.00 0.00 5.36
3188 3444 1.502527 TTGGCCTTTACCCCGGTGAT 61.503 55.000 3.32 0.00 0.00 3.06
3195 3451 1.254026 GTTGGAGTTGGCCTTTACCC 58.746 55.000 3.32 4.35 0.00 3.69
3196 3452 0.879090 CGTTGGAGTTGGCCTTTACC 59.121 55.000 3.32 3.35 0.00 2.85
3228 3499 3.665848 CGTCGCCGAACACATACAAAAAT 60.666 43.478 0.00 0.00 35.63 1.82
3233 3504 2.089936 GCGTCGCCGAACACATACA 61.090 57.895 5.75 0.00 35.63 2.29
3234 3505 1.619526 TTGCGTCGCCGAACACATAC 61.620 55.000 15.88 0.00 35.63 2.39
3241 3516 1.205568 GTTCATTTGCGTCGCCGAA 59.794 52.632 15.88 10.12 35.63 4.30
3242 3517 1.295357 ATGTTCATTTGCGTCGCCGA 61.295 50.000 15.88 3.15 35.63 5.54
3257 3532 4.211374 CGAAGAAGAAAACGGACAGATGTT 59.789 41.667 0.00 0.00 0.00 2.71
3263 3538 2.984471 CGATCGAAGAAGAAAACGGACA 59.016 45.455 10.26 0.00 43.58 4.02
3268 3543 5.338614 TCAAACCGATCGAAGAAGAAAAC 57.661 39.130 18.66 0.00 43.58 2.43
3273 3548 3.724295 GGTTCAAACCGATCGAAGAAG 57.276 47.619 18.66 1.10 38.98 2.85
3285 3560 2.928801 AGGCCAAAATGGGTTCAAAC 57.071 45.000 5.01 0.00 38.19 2.93
3286 3561 3.970640 ACTTAGGCCAAAATGGGTTCAAA 59.029 39.130 5.01 0.00 38.19 2.69
3287 3562 3.582164 ACTTAGGCCAAAATGGGTTCAA 58.418 40.909 5.01 0.00 38.19 2.69
3288 3563 3.252554 ACTTAGGCCAAAATGGGTTCA 57.747 42.857 5.01 0.00 38.19 3.18
3289 3564 4.314961 CAAACTTAGGCCAAAATGGGTTC 58.685 43.478 5.01 0.00 38.19 3.62
3290 3565 3.072330 CCAAACTTAGGCCAAAATGGGTT 59.928 43.478 5.01 0.00 38.19 4.11
3291 3566 2.637382 CCAAACTTAGGCCAAAATGGGT 59.363 45.455 5.01 0.00 38.19 4.51
3292 3567 2.027285 CCCAAACTTAGGCCAAAATGGG 60.027 50.000 5.01 11.24 40.23 4.00
3293 3568 3.333029 CCCAAACTTAGGCCAAAATGG 57.667 47.619 5.01 5.38 41.55 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.