Multiple sequence alignment - TraesCS3B01G263400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G263400 chr3B 100.000 3346 0 0 1 3346 422156300 422159645 0.000000e+00 6180.0
1 TraesCS3B01G263400 chr3B 91.525 59 5 0 910 968 422157153 422157211 7.690000e-12 82.4
2 TraesCS3B01G263400 chr3B 91.525 59 5 0 854 912 422157209 422157267 7.690000e-12 82.4
3 TraesCS3B01G263400 chr3D 95.469 2450 75 14 910 3346 327576111 327573685 0.000000e+00 3877.0
4 TraesCS3B01G263400 chr3D 92.265 181 13 1 918 1098 327577055 327576876 4.280000e-64 255.0
5 TraesCS3B01G263400 chr3D 97.101 69 2 0 1080 1148 327576861 327576793 2.110000e-22 117.0
6 TraesCS3B01G263400 chr3A 95.666 1569 48 10 962 2517 441571169 441569608 0.000000e+00 2503.0
7 TraesCS3B01G263400 chr3A 81.919 542 83 9 2620 3146 441569189 441568648 8.520000e-121 444.0
8 TraesCS3B01G263400 chr3A 90.909 77 2 2 2529 2605 441569427 441569356 7.640000e-17 99.0
9 TraesCS3B01G263400 chr3A 93.182 44 3 0 2933 2976 343162009 343162052 7.750000e-07 65.8
10 TraesCS3B01G263400 chr7B 78.596 285 49 12 1235 1513 137027078 137026800 9.540000e-41 178.0
11 TraesCS3B01G263400 chr7B 79.699 133 20 5 3052 3178 99133101 99132970 4.600000e-14 89.8
12 TraesCS3B01G263400 chr7A 77.544 285 52 12 1235 1513 173638880 173638602 9.610000e-36 161.0
13 TraesCS3B01G263400 chr7A 85.246 61 6 2 3040 3098 434731713 434731772 3.610000e-05 60.2
14 TraesCS3B01G263400 chr7D 77.193 285 53 12 1235 1513 170730877 170730599 4.470000e-34 156.0
15 TraesCS3B01G263400 chr7D 81.013 79 11 3 2948 3024 594146438 594146362 3.610000e-05 60.2
16 TraesCS3B01G263400 chr6A 79.167 144 24 4 3040 3177 582438658 582438515 9.880000e-16 95.3
17 TraesCS3B01G263400 chr1A 90.385 52 5 0 3075 3126 372168450 372168399 5.990000e-08 69.4
18 TraesCS3B01G263400 chr1A 100.000 33 0 0 3224 3256 9987199 9987167 1.000000e-05 62.1
19 TraesCS3B01G263400 chr4B 100.000 28 0 0 3068 3095 599788127 599788100 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G263400 chr3B 422156300 422159645 3345 False 2114.933333 6180 94.350 1 3346 3 chr3B.!!$F1 3345
1 TraesCS3B01G263400 chr3D 327573685 327577055 3370 True 1416.333333 3877 94.945 910 3346 3 chr3D.!!$R1 2436
2 TraesCS3B01G263400 chr3A 441568648 441571169 2521 True 1015.333333 2503 89.498 962 3146 3 chr3A.!!$R1 2184

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
563 564 0.030235 CATCGGAATCAGTCGGCGTA 59.970 55.0 6.85 0.0 0.0 4.42 F
687 688 0.100682 CGGACATGAGTGGACGGTAG 59.899 60.0 0.00 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 2387 2.357034 GCGAGCGTCTTGTTCCCA 60.357 61.111 0.00 0.00 0.00 4.37 R
2677 3979 1.226974 CAGATCAGTGGCGGTACCG 60.227 63.158 30.06 30.06 43.94 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.331098 CAGGCGCGAACAAAGCAA 59.669 55.556 12.10 0.00 34.19 3.91
18 19 2.010817 CAGGCGCGAACAAAGCAAC 61.011 57.895 12.10 0.00 34.19 4.17
19 20 2.025441 GGCGCGAACAAAGCAACA 59.975 55.556 12.10 0.00 34.19 3.33
20 21 2.292916 GGCGCGAACAAAGCAACAC 61.293 57.895 12.10 0.00 34.19 3.32
21 22 2.292916 GCGCGAACAAAGCAACACC 61.293 57.895 12.10 0.00 34.19 4.16
22 23 1.063327 CGCGAACAAAGCAACACCA 59.937 52.632 0.00 0.00 34.19 4.17
23 24 1.199852 CGCGAACAAAGCAACACCAC 61.200 55.000 0.00 0.00 34.19 4.16
24 25 0.179150 GCGAACAAAGCAACACCACA 60.179 50.000 0.00 0.00 34.19 4.17
25 26 1.544686 CGAACAAAGCAACACCACAC 58.455 50.000 0.00 0.00 0.00 3.82
26 27 1.135546 CGAACAAAGCAACACCACACA 60.136 47.619 0.00 0.00 0.00 3.72
27 28 2.669670 CGAACAAAGCAACACCACACAA 60.670 45.455 0.00 0.00 0.00 3.33
28 29 2.652941 ACAAAGCAACACCACACAAG 57.347 45.000 0.00 0.00 0.00 3.16
29 30 1.280066 CAAAGCAACACCACACAAGC 58.720 50.000 0.00 0.00 0.00 4.01
30 31 0.894141 AAAGCAACACCACACAAGCA 59.106 45.000 0.00 0.00 0.00 3.91
31 32 0.173255 AAGCAACACCACACAAGCAC 59.827 50.000 0.00 0.00 0.00 4.40
32 33 1.226945 GCAACACCACACAAGCACC 60.227 57.895 0.00 0.00 0.00 5.01
33 34 1.666209 GCAACACCACACAAGCACCT 61.666 55.000 0.00 0.00 0.00 4.00
34 35 0.817013 CAACACCACACAAGCACCTT 59.183 50.000 0.00 0.00 0.00 3.50
35 36 1.102978 AACACCACACAAGCACCTTC 58.897 50.000 0.00 0.00 0.00 3.46
36 37 0.255890 ACACCACACAAGCACCTTCT 59.744 50.000 0.00 0.00 0.00 2.85
37 38 0.947244 CACCACACAAGCACCTTCTC 59.053 55.000 0.00 0.00 0.00 2.87
38 39 0.839946 ACCACACAAGCACCTTCTCT 59.160 50.000 0.00 0.00 0.00 3.10
39 40 1.233019 CCACACAAGCACCTTCTCTG 58.767 55.000 0.00 0.00 0.00 3.35
40 41 0.590195 CACACAAGCACCTTCTCTGC 59.410 55.000 0.00 0.00 34.63 4.26
41 42 0.181114 ACACAAGCACCTTCTCTGCA 59.819 50.000 0.00 0.00 37.08 4.41
42 43 0.590195 CACAAGCACCTTCTCTGCAC 59.410 55.000 0.00 0.00 37.08 4.57
43 44 0.882042 ACAAGCACCTTCTCTGCACG 60.882 55.000 0.00 0.00 37.08 5.34
44 45 1.963338 AAGCACCTTCTCTGCACGC 60.963 57.895 0.00 0.00 37.08 5.34
45 46 3.782244 GCACCTTCTCTGCACGCG 61.782 66.667 3.53 3.53 34.56 6.01
46 47 3.782244 CACCTTCTCTGCACGCGC 61.782 66.667 5.73 0.00 39.24 6.86
65 66 3.068691 CCGTCTCCTCCGCCTCAA 61.069 66.667 0.00 0.00 0.00 3.02
66 67 2.182030 CGTCTCCTCCGCCTCAAC 59.818 66.667 0.00 0.00 0.00 3.18
67 68 2.182030 GTCTCCTCCGCCTCAACG 59.818 66.667 0.00 0.00 0.00 4.10
68 69 3.760035 TCTCCTCCGCCTCAACGC 61.760 66.667 0.00 0.00 0.00 4.84
69 70 4.821589 CTCCTCCGCCTCAACGCC 62.822 72.222 0.00 0.00 0.00 5.68
137 138 4.749310 CCGCTGTGCCTCTTCGCT 62.749 66.667 0.00 0.00 0.00 4.93
138 139 3.184683 CGCTGTGCCTCTTCGCTC 61.185 66.667 0.00 0.00 0.00 5.03
139 140 2.817396 GCTGTGCCTCTTCGCTCC 60.817 66.667 0.00 0.00 0.00 4.70
140 141 2.125350 CTGTGCCTCTTCGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
141 142 3.672295 CTGTGCCTCTTCGCTCCCC 62.672 68.421 0.00 0.00 0.00 4.81
142 143 3.706373 GTGCCTCTTCGCTCCCCA 61.706 66.667 0.00 0.00 0.00 4.96
143 144 2.688666 TGCCTCTTCGCTCCCCAT 60.689 61.111 0.00 0.00 0.00 4.00
144 145 2.110006 GCCTCTTCGCTCCCCATC 59.890 66.667 0.00 0.00 0.00 3.51
145 146 2.419198 CCTCTTCGCTCCCCATCG 59.581 66.667 0.00 0.00 0.00 3.84
146 147 2.279784 CTCTTCGCTCCCCATCGC 60.280 66.667 0.00 0.00 0.00 4.58
147 148 3.798954 CTCTTCGCTCCCCATCGCC 62.799 68.421 0.00 0.00 0.00 5.54
208 209 3.845259 GGGCGTGCCGACATAGGA 61.845 66.667 4.53 0.00 36.10 2.94
209 210 2.585247 GGCGTGCCGACATAGGAC 60.585 66.667 0.00 0.00 33.63 3.85
210 211 2.183300 GCGTGCCGACATAGGACA 59.817 61.111 0.00 0.00 0.00 4.02
211 212 2.165301 GCGTGCCGACATAGGACAC 61.165 63.158 0.00 0.00 36.03 3.67
212 213 1.872234 CGTGCCGACATAGGACACG 60.872 63.158 14.55 14.55 46.39 4.49
213 214 2.165301 GTGCCGACATAGGACACGC 61.165 63.158 0.00 0.00 32.08 5.34
214 215 2.183300 GCCGACATAGGACACGCA 59.817 61.111 0.00 0.00 0.00 5.24
215 216 1.878522 GCCGACATAGGACACGCAG 60.879 63.158 0.00 0.00 0.00 5.18
216 217 1.226974 CCGACATAGGACACGCAGG 60.227 63.158 0.00 0.00 0.00 4.85
217 218 1.511305 CGACATAGGACACGCAGGT 59.489 57.895 0.00 0.00 0.00 4.00
226 227 2.807045 CACGCAGGTGTCGAGCTC 60.807 66.667 2.73 2.73 39.38 4.09
227 228 4.057428 ACGCAGGTGTCGAGCTCC 62.057 66.667 8.47 0.00 0.00 4.70
228 229 4.056125 CGCAGGTGTCGAGCTCCA 62.056 66.667 8.47 0.00 33.35 3.86
229 230 2.125753 GCAGGTGTCGAGCTCCAG 60.126 66.667 8.47 0.00 33.35 3.86
230 231 2.125753 CAGGTGTCGAGCTCCAGC 60.126 66.667 8.47 10.94 42.49 4.85
231 232 3.386237 AGGTGTCGAGCTCCAGCC 61.386 66.667 15.72 9.94 43.38 4.85
232 233 4.803426 GGTGTCGAGCTCCAGCCG 62.803 72.222 8.47 0.00 43.38 5.52
250 251 4.717629 CCGCCGCAGAACACGAGA 62.718 66.667 0.00 0.00 0.00 4.04
251 252 2.507102 CGCCGCAGAACACGAGAT 60.507 61.111 0.00 0.00 0.00 2.75
252 253 2.508891 CGCCGCAGAACACGAGATC 61.509 63.158 0.00 0.00 0.00 2.75
253 254 2.167861 GCCGCAGAACACGAGATCC 61.168 63.158 0.00 0.00 0.00 3.36
254 255 1.215382 CCGCAGAACACGAGATCCA 59.785 57.895 0.00 0.00 0.00 3.41
255 256 0.803768 CCGCAGAACACGAGATCCAG 60.804 60.000 0.00 0.00 0.00 3.86
256 257 0.109086 CGCAGAACACGAGATCCAGT 60.109 55.000 0.00 0.00 0.00 4.00
257 258 1.132453 CGCAGAACACGAGATCCAGTA 59.868 52.381 0.00 0.00 0.00 2.74
258 259 2.415491 CGCAGAACACGAGATCCAGTAA 60.415 50.000 0.00 0.00 0.00 2.24
259 260 3.182967 GCAGAACACGAGATCCAGTAAG 58.817 50.000 0.00 0.00 0.00 2.34
260 261 3.119459 GCAGAACACGAGATCCAGTAAGA 60.119 47.826 0.00 0.00 0.00 2.10
261 262 4.440802 GCAGAACACGAGATCCAGTAAGAT 60.441 45.833 0.00 0.00 0.00 2.40
262 263 5.655488 CAGAACACGAGATCCAGTAAGATT 58.345 41.667 0.00 0.00 0.00 2.40
263 264 5.518128 CAGAACACGAGATCCAGTAAGATTG 59.482 44.000 0.00 0.00 0.00 2.67
264 265 5.419155 AGAACACGAGATCCAGTAAGATTGA 59.581 40.000 0.00 0.00 0.00 2.57
265 266 5.860941 ACACGAGATCCAGTAAGATTGAT 57.139 39.130 0.00 0.00 0.00 2.57
266 267 5.595885 ACACGAGATCCAGTAAGATTGATG 58.404 41.667 0.00 0.00 0.00 3.07
267 268 4.447054 CACGAGATCCAGTAAGATTGATGC 59.553 45.833 0.00 0.00 0.00 3.91
268 269 4.100035 ACGAGATCCAGTAAGATTGATGCA 59.900 41.667 0.00 0.00 0.00 3.96
269 270 4.685165 CGAGATCCAGTAAGATTGATGCAG 59.315 45.833 0.00 0.00 0.00 4.41
270 271 5.609423 GAGATCCAGTAAGATTGATGCAGT 58.391 41.667 0.00 0.00 0.00 4.40
271 272 5.999044 AGATCCAGTAAGATTGATGCAGTT 58.001 37.500 0.00 0.00 0.00 3.16
272 273 5.821470 AGATCCAGTAAGATTGATGCAGTTG 59.179 40.000 0.00 0.00 0.00 3.16
273 274 5.164620 TCCAGTAAGATTGATGCAGTTGA 57.835 39.130 0.00 0.00 0.00 3.18
274 275 5.559770 TCCAGTAAGATTGATGCAGTTGAA 58.440 37.500 0.00 0.00 0.00 2.69
275 276 5.645067 TCCAGTAAGATTGATGCAGTTGAAG 59.355 40.000 0.00 0.00 0.00 3.02
276 277 5.330295 CAGTAAGATTGATGCAGTTGAAGC 58.670 41.667 0.00 0.00 0.00 3.86
277 278 3.863142 AAGATTGATGCAGTTGAAGCC 57.137 42.857 0.00 0.00 0.00 4.35
278 279 2.799017 AGATTGATGCAGTTGAAGCCA 58.201 42.857 0.00 0.00 0.00 4.75
279 280 2.490903 AGATTGATGCAGTTGAAGCCAC 59.509 45.455 0.00 0.00 0.00 5.01
280 281 0.961019 TTGATGCAGTTGAAGCCACC 59.039 50.000 0.00 0.00 0.00 4.61
281 282 0.178995 TGATGCAGTTGAAGCCACCA 60.179 50.000 0.00 0.00 0.00 4.17
282 283 0.524862 GATGCAGTTGAAGCCACCAG 59.475 55.000 0.00 0.00 0.00 4.00
283 284 1.530013 ATGCAGTTGAAGCCACCAGC 61.530 55.000 0.00 0.00 44.25 4.85
284 285 2.924105 GCAGTTGAAGCCACCAGCC 61.924 63.158 0.00 0.00 45.47 4.85
285 286 1.529010 CAGTTGAAGCCACCAGCCA 60.529 57.895 0.00 0.00 45.47 4.75
286 287 1.108727 CAGTTGAAGCCACCAGCCAA 61.109 55.000 0.00 0.00 45.47 4.52
287 288 0.825010 AGTTGAAGCCACCAGCCAAG 60.825 55.000 0.00 0.00 45.47 3.61
288 289 2.202395 TTGAAGCCACCAGCCAAGC 61.202 57.895 0.00 0.00 45.47 4.01
289 290 3.376918 GAAGCCACCAGCCAAGCC 61.377 66.667 0.00 0.00 45.47 4.35
293 294 3.072468 CCACCAGCCAAGCCCATG 61.072 66.667 0.00 0.00 0.00 3.66
294 295 2.036098 CACCAGCCAAGCCCATGA 59.964 61.111 0.00 0.00 0.00 3.07
295 296 2.036256 ACCAGCCAAGCCCATGAC 59.964 61.111 0.00 0.00 0.00 3.06
296 297 2.757099 CCAGCCAAGCCCATGACC 60.757 66.667 0.00 0.00 0.00 4.02
297 298 2.036098 CAGCCAAGCCCATGACCA 59.964 61.111 0.00 0.00 0.00 4.02
298 299 2.036256 AGCCAAGCCCATGACCAC 59.964 61.111 0.00 0.00 0.00 4.16
299 300 3.070576 GCCAAGCCCATGACCACC 61.071 66.667 0.00 0.00 0.00 4.61
300 301 2.765969 CCAAGCCCATGACCACCT 59.234 61.111 0.00 0.00 0.00 4.00
301 302 1.679977 CCAAGCCCATGACCACCTG 60.680 63.158 0.00 0.00 0.00 4.00
302 303 1.075482 CAAGCCCATGACCACCTGT 59.925 57.895 0.00 0.00 0.00 4.00
303 304 0.327924 CAAGCCCATGACCACCTGTA 59.672 55.000 0.00 0.00 0.00 2.74
304 305 0.328258 AAGCCCATGACCACCTGTAC 59.672 55.000 0.00 0.00 0.00 2.90
305 306 0.840288 AGCCCATGACCACCTGTACA 60.840 55.000 0.00 0.00 0.00 2.90
306 307 0.676782 GCCCATGACCACCTGTACAC 60.677 60.000 0.00 0.00 0.00 2.90
307 308 0.391130 CCCATGACCACCTGTACACG 60.391 60.000 0.00 0.00 0.00 4.49
308 309 0.391130 CCATGACCACCTGTACACGG 60.391 60.000 9.12 9.12 0.00 4.94
310 311 0.543410 ATGACCACCTGTACACGGGA 60.543 55.000 14.23 0.00 45.36 5.14
311 312 1.183030 TGACCACCTGTACACGGGAG 61.183 60.000 14.23 5.97 45.36 4.30
312 313 2.978824 CCACCTGTACACGGGAGG 59.021 66.667 14.23 11.48 45.36 4.30
313 314 2.264794 CACCTGTACACGGGAGGC 59.735 66.667 14.23 0.00 45.36 4.70
314 315 3.001406 ACCTGTACACGGGAGGCC 61.001 66.667 14.23 0.00 45.36 5.19
315 316 3.000819 CCTGTACACGGGAGGCCA 61.001 66.667 5.01 0.00 45.36 5.36
316 317 2.367202 CCTGTACACGGGAGGCCAT 61.367 63.158 5.01 0.00 45.36 4.40
317 318 1.153369 CTGTACACGGGAGGCCATG 60.153 63.158 5.01 0.00 0.00 3.66
318 319 1.899437 CTGTACACGGGAGGCCATGT 61.899 60.000 5.01 3.57 0.00 3.21
319 320 1.153429 GTACACGGGAGGCCATGTC 60.153 63.158 5.01 0.00 0.00 3.06
320 321 2.363975 TACACGGGAGGCCATGTCC 61.364 63.158 5.01 2.48 0.00 4.02
321 322 4.838152 CACGGGAGGCCATGTCCG 62.838 72.222 19.59 19.59 46.95 4.79
323 324 4.530857 CGGGAGGCCATGTCCGAC 62.531 72.222 17.35 0.00 44.69 4.79
324 325 3.399181 GGGAGGCCATGTCCGACA 61.399 66.667 5.01 3.10 34.56 4.35
325 326 2.668632 GGAGGCCATGTCCGACAA 59.331 61.111 5.01 0.00 0.00 3.18
326 327 1.745489 GGAGGCCATGTCCGACAAC 60.745 63.158 5.01 0.00 0.00 3.32
327 328 1.745489 GAGGCCATGTCCGACAACC 60.745 63.158 5.01 7.80 0.00 3.77
328 329 3.124921 GGCCATGTCCGACAACCG 61.125 66.667 5.07 0.00 38.18 4.44
329 330 3.799755 GCCATGTCCGACAACCGC 61.800 66.667 5.07 3.86 36.84 5.68
330 331 3.124921 CCATGTCCGACAACCGCC 61.125 66.667 5.07 0.00 36.84 6.13
331 332 3.487202 CATGTCCGACAACCGCCG 61.487 66.667 5.07 0.00 36.84 6.46
337 338 4.147322 CGACAACCGCCGCATCAC 62.147 66.667 0.00 0.00 0.00 3.06
338 339 3.799755 GACAACCGCCGCATCACC 61.800 66.667 0.00 0.00 0.00 4.02
339 340 4.634703 ACAACCGCCGCATCACCA 62.635 61.111 0.00 0.00 0.00 4.17
340 341 3.133464 CAACCGCCGCATCACCAT 61.133 61.111 0.00 0.00 0.00 3.55
341 342 3.133464 AACCGCCGCATCACCATG 61.133 61.111 0.00 0.00 0.00 3.66
346 347 2.520020 CCGCATCACCATGGCCAT 60.520 61.111 14.09 14.09 0.00 4.40
347 348 2.558286 CCGCATCACCATGGCCATC 61.558 63.158 17.61 1.13 0.00 3.51
348 349 2.900167 CGCATCACCATGGCCATCG 61.900 63.158 17.61 13.01 0.00 3.84
349 350 1.526686 GCATCACCATGGCCATCGA 60.527 57.895 17.61 13.37 0.00 3.59
350 351 1.789078 GCATCACCATGGCCATCGAC 61.789 60.000 17.61 0.00 0.00 4.20
351 352 1.149174 ATCACCATGGCCATCGACC 59.851 57.895 17.61 0.00 0.00 4.79
352 353 1.634865 ATCACCATGGCCATCGACCA 61.635 55.000 17.61 0.00 42.61 4.02
353 354 2.114670 CACCATGGCCATCGACCAC 61.115 63.158 17.61 0.00 40.82 4.16
354 355 2.896854 CCATGGCCATCGACCACG 60.897 66.667 17.61 2.13 40.82 4.94
363 364 2.437895 TCGACCACGAGCCGAGAT 60.438 61.111 1.50 0.00 43.81 2.75
364 365 2.278206 CGACCACGAGCCGAGATG 60.278 66.667 1.50 0.00 42.66 2.90
365 366 2.583593 GACCACGAGCCGAGATGC 60.584 66.667 1.50 0.00 0.00 3.91
366 367 3.356639 GACCACGAGCCGAGATGCA 62.357 63.158 0.00 0.00 0.00 3.96
367 368 2.887568 CCACGAGCCGAGATGCAC 60.888 66.667 0.00 0.00 0.00 4.57
369 370 3.440415 ACGAGCCGAGATGCACGA 61.440 61.111 9.64 0.00 46.16 4.35
370 371 2.653448 CGAGCCGAGATGCACGAG 60.653 66.667 0.00 0.00 46.16 4.18
371 372 2.959071 GAGCCGAGATGCACGAGC 60.959 66.667 0.00 0.00 42.57 5.03
382 383 4.624364 CACGAGCACCAGGTGGCA 62.624 66.667 21.77 0.00 39.32 4.92
383 384 4.320456 ACGAGCACCAGGTGGCAG 62.320 66.667 21.77 13.02 39.32 4.85
384 385 4.320456 CGAGCACCAGGTGGCAGT 62.320 66.667 21.77 0.00 39.32 4.40
385 386 2.670934 GAGCACCAGGTGGCAGTG 60.671 66.667 21.77 0.59 39.32 3.66
388 389 2.981909 CACCAGGTGGCAGTGCAG 60.982 66.667 18.61 0.64 39.32 4.41
389 390 3.170672 ACCAGGTGGCAGTGCAGA 61.171 61.111 18.61 0.00 39.32 4.26
390 391 2.359602 CCAGGTGGCAGTGCAGAG 60.360 66.667 18.61 1.39 0.00 3.35
391 392 3.054503 CAGGTGGCAGTGCAGAGC 61.055 66.667 18.61 12.22 0.00 4.09
392 393 3.563224 AGGTGGCAGTGCAGAGCA 61.563 61.111 18.61 2.14 35.60 4.26
393 394 3.054503 GGTGGCAGTGCAGAGCAG 61.055 66.667 18.61 0.00 40.08 4.24
394 395 3.054503 GTGGCAGTGCAGAGCAGG 61.055 66.667 18.61 0.00 40.08 4.85
395 396 4.340246 TGGCAGTGCAGAGCAGGG 62.340 66.667 18.61 0.00 40.08 4.45
396 397 4.025858 GGCAGTGCAGAGCAGGGA 62.026 66.667 18.61 0.00 40.08 4.20
397 398 2.033141 GCAGTGCAGAGCAGGGAA 59.967 61.111 11.09 0.00 40.08 3.97
398 399 2.039405 GCAGTGCAGAGCAGGGAAG 61.039 63.158 11.09 0.00 40.08 3.46
399 400 1.376942 CAGTGCAGAGCAGGGAAGG 60.377 63.158 0.00 0.00 40.08 3.46
400 401 2.749441 GTGCAGAGCAGGGAAGGC 60.749 66.667 0.00 0.00 40.08 4.35
401 402 3.251509 TGCAGAGCAGGGAAGGCA 61.252 61.111 0.00 0.00 33.32 4.75
402 403 2.274760 GCAGAGCAGGGAAGGCAT 59.725 61.111 0.00 0.00 0.00 4.40
403 404 2.119655 GCAGAGCAGGGAAGGCATG 61.120 63.158 0.00 0.00 0.00 4.06
404 405 2.119655 CAGAGCAGGGAAGGCATGC 61.120 63.158 9.90 9.90 40.29 4.06
405 406 2.044650 GAGCAGGGAAGGCATGCA 60.045 61.111 21.36 0.00 42.45 3.96
406 407 2.044252 AGCAGGGAAGGCATGCAG 60.044 61.111 21.36 0.85 42.45 4.41
407 408 3.145551 GCAGGGAAGGCATGCAGG 61.146 66.667 21.36 0.00 39.75 4.85
408 409 2.679092 CAGGGAAGGCATGCAGGA 59.321 61.111 21.36 0.00 0.00 3.86
409 410 1.453379 CAGGGAAGGCATGCAGGAG 60.453 63.158 21.36 0.00 0.00 3.69
410 411 1.617536 AGGGAAGGCATGCAGGAGA 60.618 57.895 21.36 0.00 0.00 3.71
411 412 0.992431 AGGGAAGGCATGCAGGAGAT 60.992 55.000 21.36 0.00 0.00 2.75
412 413 0.822532 GGGAAGGCATGCAGGAGATG 60.823 60.000 21.36 0.00 0.00 2.90
413 414 0.106819 GGAAGGCATGCAGGAGATGT 60.107 55.000 21.36 0.00 0.00 3.06
414 415 1.307097 GAAGGCATGCAGGAGATGTC 58.693 55.000 21.36 0.00 0.00 3.06
415 416 0.463295 AAGGCATGCAGGAGATGTCG 60.463 55.000 21.36 0.00 30.39 4.35
416 417 1.144716 GGCATGCAGGAGATGTCGA 59.855 57.895 21.36 0.00 0.00 4.20
417 418 0.879400 GGCATGCAGGAGATGTCGAG 60.879 60.000 21.36 0.00 0.00 4.04
418 419 0.879400 GCATGCAGGAGATGTCGAGG 60.879 60.000 14.21 0.00 0.00 4.63
419 420 0.749049 CATGCAGGAGATGTCGAGGA 59.251 55.000 0.00 0.00 0.00 3.71
420 421 1.039068 ATGCAGGAGATGTCGAGGAG 58.961 55.000 0.00 0.00 0.00 3.69
421 422 1.039785 TGCAGGAGATGTCGAGGAGG 61.040 60.000 0.00 0.00 0.00 4.30
422 423 1.739049 CAGGAGATGTCGAGGAGGC 59.261 63.158 0.00 0.00 0.00 4.70
423 424 1.039785 CAGGAGATGTCGAGGAGGCA 61.040 60.000 0.00 0.00 39.68 4.75
424 425 1.040339 AGGAGATGTCGAGGAGGCAC 61.040 60.000 0.00 0.00 37.24 5.01
425 426 1.323271 GGAGATGTCGAGGAGGCACA 61.323 60.000 0.00 0.00 37.24 4.57
426 427 0.749649 GAGATGTCGAGGAGGCACAT 59.250 55.000 0.00 0.00 37.24 3.21
427 428 1.137872 GAGATGTCGAGGAGGCACATT 59.862 52.381 0.00 0.00 37.24 2.71
428 429 2.362397 GAGATGTCGAGGAGGCACATTA 59.638 50.000 0.00 0.00 37.24 1.90
429 430 2.363680 AGATGTCGAGGAGGCACATTAG 59.636 50.000 0.00 0.00 37.24 1.73
430 431 1.847328 TGTCGAGGAGGCACATTAGA 58.153 50.000 0.00 0.00 0.00 2.10
431 432 2.176045 TGTCGAGGAGGCACATTAGAA 58.824 47.619 0.00 0.00 0.00 2.10
432 433 2.565391 TGTCGAGGAGGCACATTAGAAA 59.435 45.455 0.00 0.00 0.00 2.52
433 434 3.190874 GTCGAGGAGGCACATTAGAAAG 58.809 50.000 0.00 0.00 0.00 2.62
434 435 1.936547 CGAGGAGGCACATTAGAAAGC 59.063 52.381 0.00 0.00 0.00 3.51
435 436 1.936547 GAGGAGGCACATTAGAAAGCG 59.063 52.381 0.00 0.00 0.00 4.68
436 437 0.378610 GGAGGCACATTAGAAAGCGC 59.621 55.000 0.00 0.00 0.00 5.92
437 438 1.086696 GAGGCACATTAGAAAGCGCA 58.913 50.000 11.47 0.00 0.00 6.09
438 439 1.063174 GAGGCACATTAGAAAGCGCAG 59.937 52.381 11.47 0.00 0.00 5.18
439 440 0.099436 GGCACATTAGAAAGCGCAGG 59.901 55.000 11.47 0.00 0.00 4.85
440 441 0.524180 GCACATTAGAAAGCGCAGGC 60.524 55.000 11.47 0.00 40.37 4.85
441 442 0.804364 CACATTAGAAAGCGCAGGCA 59.196 50.000 11.47 0.00 43.41 4.75
442 443 1.199789 CACATTAGAAAGCGCAGGCAA 59.800 47.619 11.47 0.00 43.41 4.52
443 444 1.200020 ACATTAGAAAGCGCAGGCAAC 59.800 47.619 11.47 0.00 43.41 4.17
444 445 1.199789 CATTAGAAAGCGCAGGCAACA 59.800 47.619 11.47 0.00 43.41 3.33
445 446 0.591170 TTAGAAAGCGCAGGCAACAC 59.409 50.000 11.47 0.00 43.41 3.32
446 447 0.533978 TAGAAAGCGCAGGCAACACA 60.534 50.000 11.47 0.00 43.41 3.72
447 448 1.065600 GAAAGCGCAGGCAACACAA 59.934 52.632 11.47 0.00 43.41 3.33
448 449 0.936297 GAAAGCGCAGGCAACACAAG 60.936 55.000 11.47 0.00 43.41 3.16
449 450 2.354074 AAAGCGCAGGCAACACAAGG 62.354 55.000 11.47 0.00 43.41 3.61
450 451 3.286751 GCGCAGGCAACACAAGGA 61.287 61.111 0.30 0.00 39.62 3.36
451 452 2.949106 CGCAGGCAACACAAGGAG 59.051 61.111 0.00 0.00 41.41 3.69
452 453 1.597854 CGCAGGCAACACAAGGAGA 60.598 57.895 0.00 0.00 41.41 3.71
453 454 1.572085 CGCAGGCAACACAAGGAGAG 61.572 60.000 0.00 0.00 41.41 3.20
454 455 1.239968 GCAGGCAACACAAGGAGAGG 61.240 60.000 0.00 0.00 41.41 3.69
455 456 0.109342 CAGGCAACACAAGGAGAGGT 59.891 55.000 0.00 0.00 41.41 3.85
456 457 0.109342 AGGCAACACAAGGAGAGGTG 59.891 55.000 0.00 0.00 40.78 4.00
457 458 0.890996 GGCAACACAAGGAGAGGTGG 60.891 60.000 0.00 0.00 39.31 4.61
458 459 1.518903 GCAACACAAGGAGAGGTGGC 61.519 60.000 0.00 0.00 39.31 5.01
459 460 1.071471 AACACAAGGAGAGGTGGCG 59.929 57.895 0.00 0.00 39.31 5.69
460 461 1.407656 AACACAAGGAGAGGTGGCGA 61.408 55.000 0.00 0.00 39.31 5.54
461 462 1.079543 CACAAGGAGAGGTGGCGAG 60.080 63.158 0.00 0.00 0.00 5.03
462 463 1.228894 ACAAGGAGAGGTGGCGAGA 60.229 57.895 0.00 0.00 0.00 4.04
463 464 1.254284 ACAAGGAGAGGTGGCGAGAG 61.254 60.000 0.00 0.00 0.00 3.20
464 465 1.684049 AAGGAGAGGTGGCGAGAGG 60.684 63.158 0.00 0.00 0.00 3.69
481 482 3.680156 GCAAATCGCCTTGGTGGA 58.320 55.556 0.00 0.00 38.35 4.02
482 483 1.508088 GCAAATCGCCTTGGTGGAG 59.492 57.895 0.00 0.00 38.35 3.86
486 487 2.203788 TCGCCTTGGTGGAGAGGT 60.204 61.111 0.00 0.00 39.76 3.85
487 488 1.077805 TCGCCTTGGTGGAGAGGTA 59.922 57.895 0.00 0.00 39.76 3.08
488 489 0.970937 TCGCCTTGGTGGAGAGGTAG 60.971 60.000 0.00 0.00 39.76 3.18
489 490 1.908483 GCCTTGGTGGAGAGGTAGG 59.092 63.158 0.00 0.00 38.35 3.18
490 491 1.627297 GCCTTGGTGGAGAGGTAGGG 61.627 65.000 0.00 0.00 38.35 3.53
491 492 1.627297 CCTTGGTGGAGAGGTAGGGC 61.627 65.000 0.00 0.00 38.35 5.19
492 493 0.618968 CTTGGTGGAGAGGTAGGGCT 60.619 60.000 0.00 0.00 0.00 5.19
493 494 0.617820 TTGGTGGAGAGGTAGGGCTC 60.618 60.000 0.00 0.00 0.00 4.70
494 495 2.128507 GGTGGAGAGGTAGGGCTCG 61.129 68.421 0.00 0.00 31.95 5.03
495 496 1.380112 GTGGAGAGGTAGGGCTCGT 60.380 63.158 0.00 0.00 31.95 4.18
496 497 1.076923 TGGAGAGGTAGGGCTCGTC 60.077 63.158 0.00 0.00 31.95 4.20
497 498 2.188161 GGAGAGGTAGGGCTCGTCG 61.188 68.421 0.00 0.00 31.95 5.12
498 499 1.153208 GAGAGGTAGGGCTCGTCGA 60.153 63.158 0.00 0.00 0.00 4.20
499 500 1.153127 AGAGGTAGGGCTCGTCGAG 60.153 63.158 18.08 18.08 0.00 4.04
500 501 2.124236 AGGTAGGGCTCGTCGAGG 60.124 66.667 23.09 5.92 0.00 4.63
501 502 3.217743 GGTAGGGCTCGTCGAGGG 61.218 72.222 23.09 0.46 0.00 4.30
502 503 3.217743 GTAGGGCTCGTCGAGGGG 61.218 72.222 23.09 2.31 0.00 4.79
503 504 4.517934 TAGGGCTCGTCGAGGGGG 62.518 72.222 23.09 0.00 0.00 5.40
507 508 3.069318 GCTCGTCGAGGGGGAGTT 61.069 66.667 23.09 0.00 0.00 3.01
508 509 2.885861 CTCGTCGAGGGGGAGTTG 59.114 66.667 14.68 0.00 0.00 3.16
509 510 1.977544 CTCGTCGAGGGGGAGTTGT 60.978 63.158 14.68 0.00 0.00 3.32
510 511 0.679002 CTCGTCGAGGGGGAGTTGTA 60.679 60.000 14.68 0.00 0.00 2.41
511 512 0.679002 TCGTCGAGGGGGAGTTGTAG 60.679 60.000 5.12 0.00 0.00 2.74
512 513 1.664321 CGTCGAGGGGGAGTTGTAGG 61.664 65.000 0.00 0.00 0.00 3.18
513 514 1.684734 TCGAGGGGGAGTTGTAGGC 60.685 63.158 0.00 0.00 0.00 3.93
514 515 2.901042 GAGGGGGAGTTGTAGGCG 59.099 66.667 0.00 0.00 0.00 5.52
515 516 3.387225 GAGGGGGAGTTGTAGGCGC 62.387 68.421 0.00 0.00 0.00 6.53
516 517 4.832608 GGGGGAGTTGTAGGCGCG 62.833 72.222 0.00 0.00 0.00 6.86
517 518 4.078516 GGGGAGTTGTAGGCGCGT 62.079 66.667 8.43 8.08 0.00 6.01
518 519 2.713967 GGGGAGTTGTAGGCGCGTA 61.714 63.158 8.43 5.57 0.00 4.42
519 520 1.226888 GGGAGTTGTAGGCGCGTAG 60.227 63.158 10.58 0.00 0.00 3.51
532 533 2.476051 CGTAGCACGGCAGCAAAG 59.524 61.111 0.00 0.00 38.08 2.77
533 534 2.176792 GTAGCACGGCAGCAAAGC 59.823 61.111 0.00 0.00 36.85 3.51
534 535 3.422303 TAGCACGGCAGCAAAGCG 61.422 61.111 0.00 0.00 36.85 4.68
536 537 2.773397 TAGCACGGCAGCAAAGCGTA 62.773 55.000 0.00 0.00 36.85 4.42
537 538 2.476051 CACGGCAGCAAAGCGTAG 59.524 61.111 0.00 0.00 34.64 3.51
550 551 3.417601 CGTAGCGGACTCATCGGA 58.582 61.111 0.00 0.00 0.00 4.55
551 552 1.725665 CGTAGCGGACTCATCGGAA 59.274 57.895 0.00 0.00 0.00 4.30
552 553 0.311165 CGTAGCGGACTCATCGGAAT 59.689 55.000 0.00 0.00 0.00 3.01
553 554 1.663445 CGTAGCGGACTCATCGGAATC 60.663 57.143 0.00 0.00 0.00 2.52
554 555 1.337071 GTAGCGGACTCATCGGAATCA 59.663 52.381 0.00 0.00 0.00 2.57
555 556 0.387202 AGCGGACTCATCGGAATCAG 59.613 55.000 0.00 0.00 0.00 2.90
556 557 0.103208 GCGGACTCATCGGAATCAGT 59.897 55.000 0.00 0.00 0.00 3.41
557 558 1.866063 GCGGACTCATCGGAATCAGTC 60.866 57.143 6.02 6.02 35.49 3.51
558 559 1.598183 CGGACTCATCGGAATCAGTCG 60.598 57.143 7.75 0.00 36.85 4.18
559 560 1.269309 GGACTCATCGGAATCAGTCGG 60.269 57.143 7.75 0.00 36.85 4.79
560 561 0.103208 ACTCATCGGAATCAGTCGGC 59.897 55.000 0.00 0.00 0.00 5.54
561 562 0.936764 CTCATCGGAATCAGTCGGCG 60.937 60.000 0.00 0.00 0.00 6.46
562 563 1.226974 CATCGGAATCAGTCGGCGT 60.227 57.895 6.85 0.00 0.00 5.68
563 564 0.030235 CATCGGAATCAGTCGGCGTA 59.970 55.000 6.85 0.00 0.00 4.42
564 565 0.311165 ATCGGAATCAGTCGGCGTAG 59.689 55.000 6.85 0.00 0.00 3.51
583 584 4.785453 GGCAGCGACAGGGGGAAG 62.785 72.222 0.00 0.00 0.00 3.46
584 585 4.785453 GCAGCGACAGGGGGAAGG 62.785 72.222 0.00 0.00 0.00 3.46
585 586 4.101448 CAGCGACAGGGGGAAGGG 62.101 72.222 0.00 0.00 0.00 3.95
588 589 4.733725 CGACAGGGGGAAGGGGGA 62.734 72.222 0.00 0.00 0.00 4.81
589 590 2.692741 GACAGGGGGAAGGGGGAG 60.693 72.222 0.00 0.00 0.00 4.30
590 591 3.216371 ACAGGGGGAAGGGGGAGA 61.216 66.667 0.00 0.00 0.00 3.71
591 592 2.367512 CAGGGGGAAGGGGGAGAG 60.368 72.222 0.00 0.00 0.00 3.20
592 593 2.543637 AGGGGGAAGGGGGAGAGA 60.544 66.667 0.00 0.00 0.00 3.10
593 594 2.040359 GGGGGAAGGGGGAGAGAG 60.040 72.222 0.00 0.00 0.00 3.20
594 595 2.647949 GGGGGAAGGGGGAGAGAGA 61.648 68.421 0.00 0.00 0.00 3.10
595 596 1.074850 GGGGAAGGGGGAGAGAGAG 60.075 68.421 0.00 0.00 0.00 3.20
596 597 1.595058 GGGGAAGGGGGAGAGAGAGA 61.595 65.000 0.00 0.00 0.00 3.10
597 598 0.105709 GGGAAGGGGGAGAGAGAGAG 60.106 65.000 0.00 0.00 0.00 3.20
598 599 0.930726 GGAAGGGGGAGAGAGAGAGA 59.069 60.000 0.00 0.00 0.00 3.10
599 600 1.133482 GGAAGGGGGAGAGAGAGAGAG 60.133 61.905 0.00 0.00 0.00 3.20
600 601 1.850345 GAAGGGGGAGAGAGAGAGAGA 59.150 57.143 0.00 0.00 0.00 3.10
601 602 1.522900 AGGGGGAGAGAGAGAGAGAG 58.477 60.000 0.00 0.00 0.00 3.20
602 603 1.010793 AGGGGGAGAGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
603 604 1.421646 GGGGGAGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
604 605 2.127708 GGGGAGAGAGAGAGAGAGAGT 58.872 57.143 0.00 0.00 0.00 3.24
605 606 2.509964 GGGGAGAGAGAGAGAGAGAGTT 59.490 54.545 0.00 0.00 0.00 3.01
606 607 3.545703 GGGAGAGAGAGAGAGAGAGTTG 58.454 54.545 0.00 0.00 0.00 3.16
607 608 3.054361 GGGAGAGAGAGAGAGAGAGTTGT 60.054 52.174 0.00 0.00 0.00 3.32
608 609 4.163458 GGGAGAGAGAGAGAGAGAGTTGTA 59.837 50.000 0.00 0.00 0.00 2.41
609 610 5.116882 GGAGAGAGAGAGAGAGAGTTGTAC 58.883 50.000 0.00 0.00 0.00 2.90
610 611 4.755411 AGAGAGAGAGAGAGAGTTGTACG 58.245 47.826 0.00 0.00 0.00 3.67
611 612 4.464951 AGAGAGAGAGAGAGAGTTGTACGA 59.535 45.833 0.00 0.00 0.00 3.43
612 613 4.755411 AGAGAGAGAGAGAGTTGTACGAG 58.245 47.826 0.00 0.00 0.00 4.18
613 614 4.464951 AGAGAGAGAGAGAGTTGTACGAGA 59.535 45.833 0.00 0.00 0.00 4.04
614 615 4.755411 AGAGAGAGAGAGTTGTACGAGAG 58.245 47.826 0.00 0.00 0.00 3.20
615 616 4.464951 AGAGAGAGAGAGTTGTACGAGAGA 59.535 45.833 0.00 0.00 0.00 3.10
616 617 4.755411 AGAGAGAGAGTTGTACGAGAGAG 58.245 47.826 0.00 0.00 0.00 3.20
617 618 3.869065 AGAGAGAGTTGTACGAGAGAGG 58.131 50.000 0.00 0.00 0.00 3.69
618 619 2.353579 GAGAGAGTTGTACGAGAGAGGC 59.646 54.545 0.00 0.00 0.00 4.70
619 620 1.062880 GAGAGTTGTACGAGAGAGGCG 59.937 57.143 0.00 0.00 0.00 5.52
620 621 1.085091 GAGTTGTACGAGAGAGGCGA 58.915 55.000 0.00 0.00 0.00 5.54
621 622 1.062880 GAGTTGTACGAGAGAGGCGAG 59.937 57.143 0.00 0.00 0.00 5.03
622 623 1.085091 GTTGTACGAGAGAGGCGAGA 58.915 55.000 0.00 0.00 0.00 4.04
623 624 1.062880 GTTGTACGAGAGAGGCGAGAG 59.937 57.143 0.00 0.00 0.00 3.20
624 625 0.535797 TGTACGAGAGAGGCGAGAGA 59.464 55.000 0.00 0.00 0.00 3.10
625 626 1.139256 TGTACGAGAGAGGCGAGAGAT 59.861 52.381 0.00 0.00 0.00 2.75
626 627 1.529438 GTACGAGAGAGGCGAGAGATG 59.471 57.143 0.00 0.00 0.00 2.90
627 628 1.282570 CGAGAGAGGCGAGAGATGC 59.717 63.158 0.00 0.00 0.00 3.91
628 629 1.282570 GAGAGAGGCGAGAGATGCG 59.717 63.158 0.00 0.00 0.00 4.73
629 630 1.153066 AGAGAGGCGAGAGATGCGA 60.153 57.895 0.00 0.00 0.00 5.10
630 631 1.165907 AGAGAGGCGAGAGATGCGAG 61.166 60.000 0.00 0.00 0.00 5.03
631 632 2.354539 GAGGCGAGAGATGCGAGC 60.355 66.667 0.00 0.00 0.00 5.03
632 633 4.263209 AGGCGAGAGATGCGAGCG 62.263 66.667 0.00 0.00 0.00 5.03
653 654 4.320456 CCCTGCGCAGTCACTGGT 62.320 66.667 33.75 0.00 31.21 4.00
654 655 2.656646 CCTGCGCAGTCACTGGTA 59.343 61.111 33.75 0.00 31.21 3.25
655 656 1.738099 CCTGCGCAGTCACTGGTAC 60.738 63.158 33.75 0.00 31.21 3.34
656 657 1.006220 CTGCGCAGTCACTGGTACA 60.006 57.895 29.24 0.00 31.21 2.90
657 658 0.390340 CTGCGCAGTCACTGGTACAT 60.390 55.000 29.24 0.00 38.20 2.29
658 659 0.670239 TGCGCAGTCACTGGTACATG 60.670 55.000 5.66 0.00 38.20 3.21
659 660 1.361668 GCGCAGTCACTGGTACATGG 61.362 60.000 7.00 0.00 38.20 3.66
660 661 0.740868 CGCAGTCACTGGTACATGGG 60.741 60.000 7.00 0.00 38.20 4.00
661 662 0.613260 GCAGTCACTGGTACATGGGA 59.387 55.000 7.00 0.00 38.20 4.37
662 663 1.676014 GCAGTCACTGGTACATGGGAC 60.676 57.143 7.00 10.57 39.17 4.46
663 664 1.066143 CAGTCACTGGTACATGGGACC 60.066 57.143 13.76 11.23 39.51 4.46
664 665 0.981183 GTCACTGGTACATGGGACCA 59.019 55.000 17.93 17.93 44.86 4.02
665 666 1.349688 GTCACTGGTACATGGGACCAA 59.650 52.381 19.08 5.74 46.27 3.67
666 667 1.628340 TCACTGGTACATGGGACCAAG 59.372 52.381 19.08 15.11 46.27 3.61
667 668 0.991920 ACTGGTACATGGGACCAAGG 59.008 55.000 19.08 12.65 46.27 3.61
668 669 0.394352 CTGGTACATGGGACCAAGGC 60.394 60.000 19.08 0.00 46.27 4.35
669 670 1.451387 GGTACATGGGACCAAGGCG 60.451 63.158 12.86 0.00 36.91 5.52
670 671 1.451387 GTACATGGGACCAAGGCGG 60.451 63.158 0.00 0.00 42.50 6.13
671 672 1.613928 TACATGGGACCAAGGCGGA 60.614 57.895 0.00 0.00 38.63 5.54
672 673 1.906105 TACATGGGACCAAGGCGGAC 61.906 60.000 0.00 0.00 38.63 4.79
673 674 2.933287 ATGGGACCAAGGCGGACA 60.933 61.111 0.00 0.00 38.63 4.02
674 675 2.308722 ATGGGACCAAGGCGGACAT 61.309 57.895 0.00 0.00 38.63 3.06
675 676 2.438434 GGGACCAAGGCGGACATG 60.438 66.667 0.00 0.00 38.63 3.21
676 677 2.668632 GGACCAAGGCGGACATGA 59.331 61.111 0.00 0.00 38.63 3.07
677 678 1.450312 GGACCAAGGCGGACATGAG 60.450 63.158 0.00 0.00 38.63 2.90
678 679 1.296715 GACCAAGGCGGACATGAGT 59.703 57.895 0.00 0.00 38.63 3.41
679 680 1.003355 ACCAAGGCGGACATGAGTG 60.003 57.895 0.00 0.00 38.63 3.51
680 681 1.746615 CCAAGGCGGACATGAGTGG 60.747 63.158 0.00 0.00 36.56 4.00
681 682 1.296392 CAAGGCGGACATGAGTGGA 59.704 57.895 0.00 0.00 0.00 4.02
682 683 1.021390 CAAGGCGGACATGAGTGGAC 61.021 60.000 0.00 0.00 0.00 4.02
683 684 2.507110 AAGGCGGACATGAGTGGACG 62.507 60.000 0.00 0.00 0.00 4.79
684 685 2.509336 GCGGACATGAGTGGACGG 60.509 66.667 0.00 0.00 0.00 4.79
685 686 2.970639 CGGACATGAGTGGACGGT 59.029 61.111 0.00 0.00 0.00 4.83
686 687 1.940883 GCGGACATGAGTGGACGGTA 61.941 60.000 0.00 0.00 0.00 4.02
687 688 0.100682 CGGACATGAGTGGACGGTAG 59.899 60.000 0.00 0.00 0.00 3.18
688 689 0.179108 GGACATGAGTGGACGGTAGC 60.179 60.000 0.00 0.00 0.00 3.58
689 690 0.525668 GACATGAGTGGACGGTAGCG 60.526 60.000 13.69 13.69 0.00 4.26
690 691 0.963856 ACATGAGTGGACGGTAGCGA 60.964 55.000 22.88 0.00 0.00 4.93
691 692 0.248661 CATGAGTGGACGGTAGCGAG 60.249 60.000 22.88 0.00 0.00 5.03
692 693 2.005960 ATGAGTGGACGGTAGCGAGC 62.006 60.000 22.88 12.07 0.00 5.03
700 701 4.253257 GGTAGCGAGCGACGGGAG 62.253 72.222 0.00 0.00 42.83 4.30
701 702 4.908877 GTAGCGAGCGACGGGAGC 62.909 72.222 0.00 0.00 42.83 4.70
712 713 4.265282 CGGGAGCGTCCGTTTTTA 57.735 55.556 11.72 0.00 44.60 1.52
713 714 2.758497 CGGGAGCGTCCGTTTTTAT 58.242 52.632 11.72 0.00 44.60 1.40
714 715 0.648958 CGGGAGCGTCCGTTTTTATC 59.351 55.000 11.72 0.00 44.60 1.75
715 716 1.012086 GGGAGCGTCCGTTTTTATCC 58.988 55.000 0.00 0.00 37.43 2.59
716 717 1.676615 GGGAGCGTCCGTTTTTATCCA 60.677 52.381 0.00 0.00 37.43 3.41
717 718 2.285977 GGAGCGTCCGTTTTTATCCAT 58.714 47.619 0.00 0.00 0.00 3.41
718 719 2.681344 GGAGCGTCCGTTTTTATCCATT 59.319 45.455 0.00 0.00 0.00 3.16
719 720 3.128068 GGAGCGTCCGTTTTTATCCATTT 59.872 43.478 0.00 0.00 0.00 2.32
720 721 4.340263 GAGCGTCCGTTTTTATCCATTTC 58.660 43.478 0.00 0.00 0.00 2.17
721 722 3.754323 AGCGTCCGTTTTTATCCATTTCA 59.246 39.130 0.00 0.00 0.00 2.69
722 723 4.398044 AGCGTCCGTTTTTATCCATTTCAT 59.602 37.500 0.00 0.00 0.00 2.57
723 724 5.587043 AGCGTCCGTTTTTATCCATTTCATA 59.413 36.000 0.00 0.00 0.00 2.15
724 725 5.679792 GCGTCCGTTTTTATCCATTTCATAC 59.320 40.000 0.00 0.00 0.00 2.39
725 726 6.196571 CGTCCGTTTTTATCCATTTCATACC 58.803 40.000 0.00 0.00 0.00 2.73
726 727 6.500910 GTCCGTTTTTATCCATTTCATACCC 58.499 40.000 0.00 0.00 0.00 3.69
727 728 6.095720 GTCCGTTTTTATCCATTTCATACCCA 59.904 38.462 0.00 0.00 0.00 4.51
728 729 6.836527 TCCGTTTTTATCCATTTCATACCCAT 59.163 34.615 0.00 0.00 0.00 4.00
729 730 7.343316 TCCGTTTTTATCCATTTCATACCCATT 59.657 33.333 0.00 0.00 0.00 3.16
730 731 7.984617 CCGTTTTTATCCATTTCATACCCATTT 59.015 33.333 0.00 0.00 0.00 2.32
731 732 8.816144 CGTTTTTATCCATTTCATACCCATTTG 58.184 33.333 0.00 0.00 0.00 2.32
732 733 9.665719 GTTTTTATCCATTTCATACCCATTTGT 57.334 29.630 0.00 0.00 0.00 2.83
733 734 9.664332 TTTTTATCCATTTCATACCCATTTGTG 57.336 29.630 0.00 0.00 0.00 3.33
734 735 5.874897 ATCCATTTCATACCCATTTGTGG 57.125 39.130 0.00 0.00 0.00 4.17
735 736 3.450457 TCCATTTCATACCCATTTGTGGC 59.550 43.478 0.00 0.00 0.00 5.01
736 737 3.451902 CCATTTCATACCCATTTGTGGCT 59.548 43.478 0.00 0.00 0.00 4.75
737 738 4.441913 CCATTTCATACCCATTTGTGGCTC 60.442 45.833 0.00 0.00 0.00 4.70
738 739 3.448093 TTCATACCCATTTGTGGCTCA 57.552 42.857 0.00 0.00 0.00 4.26
739 740 3.668141 TCATACCCATTTGTGGCTCAT 57.332 42.857 0.00 0.00 0.00 2.90
740 741 4.787135 TCATACCCATTTGTGGCTCATA 57.213 40.909 0.00 0.00 0.00 2.15
741 742 5.323382 TCATACCCATTTGTGGCTCATAT 57.677 39.130 0.00 0.00 0.00 1.78
742 743 5.704354 TCATACCCATTTGTGGCTCATATT 58.296 37.500 0.00 0.00 0.00 1.28
743 744 6.135454 TCATACCCATTTGTGGCTCATATTT 58.865 36.000 0.00 0.00 0.00 1.40
744 745 4.741321 ACCCATTTGTGGCTCATATTTG 57.259 40.909 0.00 0.00 0.00 2.32
745 746 3.451902 ACCCATTTGTGGCTCATATTTGG 59.548 43.478 0.00 0.00 0.00 3.28
746 747 3.705579 CCCATTTGTGGCTCATATTTGGA 59.294 43.478 8.32 0.00 0.00 3.53
747 748 4.441913 CCCATTTGTGGCTCATATTTGGAC 60.442 45.833 8.32 0.00 0.00 4.02
748 749 4.441913 CCATTTGTGGCTCATATTTGGACC 60.442 45.833 0.00 0.00 0.00 4.46
749 750 3.448093 TTGTGGCTCATATTTGGACCA 57.552 42.857 0.00 0.00 0.00 4.02
750 751 3.448093 TGTGGCTCATATTTGGACCAA 57.552 42.857 1.69 1.69 32.34 3.67
751 752 3.355378 TGTGGCTCATATTTGGACCAAG 58.645 45.455 7.07 0.00 32.34 3.61
752 753 3.245229 TGTGGCTCATATTTGGACCAAGT 60.245 43.478 7.07 7.28 32.34 3.16
753 754 3.763897 GTGGCTCATATTTGGACCAAGTT 59.236 43.478 7.63 2.45 32.34 2.66
754 755 4.220602 GTGGCTCATATTTGGACCAAGTTT 59.779 41.667 7.63 0.00 32.34 2.66
755 756 4.837860 TGGCTCATATTTGGACCAAGTTTT 59.162 37.500 7.63 0.00 0.00 2.43
756 757 5.170748 GGCTCATATTTGGACCAAGTTTTG 58.829 41.667 7.63 6.76 0.00 2.44
764 765 2.642700 CCAAGTTTTGGTCGGGCG 59.357 61.111 0.00 0.00 45.93 6.13
765 766 2.642700 CAAGTTTTGGTCGGGCGG 59.357 61.111 0.00 0.00 0.00 6.13
766 767 1.894756 CAAGTTTTGGTCGGGCGGA 60.895 57.895 0.00 0.00 0.00 5.54
767 768 1.074248 AAGTTTTGGTCGGGCGGAT 59.926 52.632 0.00 0.00 0.00 4.18
768 769 0.325602 AAGTTTTGGTCGGGCGGATA 59.674 50.000 0.00 0.00 0.00 2.59
769 770 0.107848 AGTTTTGGTCGGGCGGATAG 60.108 55.000 0.00 0.00 0.00 2.08
780 781 4.647615 CGGATAGCAGGCGGGTCG 62.648 72.222 0.00 0.00 0.00 4.79
804 805 6.020971 CCCCGTTAGGCCAAATTTATATTC 57.979 41.667 5.01 0.00 35.76 1.75
805 806 5.335348 CCCCGTTAGGCCAAATTTATATTCG 60.335 44.000 5.01 0.00 35.76 3.34
806 807 5.470777 CCCGTTAGGCCAAATTTATATTCGA 59.529 40.000 5.01 0.00 35.76 3.71
807 808 6.016943 CCCGTTAGGCCAAATTTATATTCGAA 60.017 38.462 5.01 0.00 35.76 3.71
808 809 7.308951 CCCGTTAGGCCAAATTTATATTCGAAT 60.309 37.037 16.15 16.15 35.76 3.34
809 810 7.537306 CCGTTAGGCCAAATTTATATTCGAATG 59.463 37.037 20.87 2.50 0.00 2.67
810 811 8.286800 CGTTAGGCCAAATTTATATTCGAATGA 58.713 33.333 20.87 5.71 0.00 2.57
811 812 9.394477 GTTAGGCCAAATTTATATTCGAATGAC 57.606 33.333 20.87 2.48 0.00 3.06
812 813 6.981722 AGGCCAAATTTATATTCGAATGACC 58.018 36.000 20.87 4.69 0.00 4.02
813 814 6.015434 AGGCCAAATTTATATTCGAATGACCC 60.015 38.462 20.87 6.76 0.00 4.46
814 815 6.239176 GGCCAAATTTATATTCGAATGACCCA 60.239 38.462 20.87 0.00 0.00 4.51
815 816 7.206687 GCCAAATTTATATTCGAATGACCCAA 58.793 34.615 20.87 6.70 0.00 4.12
816 817 7.708752 GCCAAATTTATATTCGAATGACCCAAA 59.291 33.333 20.87 12.33 0.00 3.28
817 818 9.030301 CCAAATTTATATTCGAATGACCCAAAC 57.970 33.333 20.87 0.00 0.00 2.93
818 819 8.742188 CAAATTTATATTCGAATGACCCAAACG 58.258 33.333 20.87 0.00 0.00 3.60
819 820 5.994887 TTATATTCGAATGACCCAAACGG 57.005 39.130 20.87 0.00 37.81 4.44
820 821 2.483014 ATTCGAATGACCCAAACGGA 57.517 45.000 10.50 0.00 34.64 4.69
821 822 2.483014 TTCGAATGACCCAAACGGAT 57.517 45.000 0.00 0.00 34.64 4.18
822 823 3.613494 TTCGAATGACCCAAACGGATA 57.387 42.857 0.00 0.00 34.64 2.59
823 824 3.613494 TCGAATGACCCAAACGGATAA 57.387 42.857 0.00 0.00 34.64 1.75
824 825 3.940319 TCGAATGACCCAAACGGATAAA 58.060 40.909 0.00 0.00 34.64 1.40
825 826 4.325119 TCGAATGACCCAAACGGATAAAA 58.675 39.130 0.00 0.00 34.64 1.52
826 827 4.944930 TCGAATGACCCAAACGGATAAAAT 59.055 37.500 0.00 0.00 34.64 1.82
827 828 6.114089 TCGAATGACCCAAACGGATAAAATA 58.886 36.000 0.00 0.00 34.64 1.40
828 829 6.259167 TCGAATGACCCAAACGGATAAAATAG 59.741 38.462 0.00 0.00 34.64 1.73
829 830 6.512741 CGAATGACCCAAACGGATAAAATAGG 60.513 42.308 0.00 0.00 34.64 2.57
830 831 5.182169 TGACCCAAACGGATAAAATAGGT 57.818 39.130 0.00 0.00 34.64 3.08
831 832 5.187687 TGACCCAAACGGATAAAATAGGTC 58.812 41.667 0.00 0.00 41.30 3.85
832 833 4.193865 ACCCAAACGGATAAAATAGGTCG 58.806 43.478 0.00 0.00 34.64 4.79
833 834 3.002965 CCCAAACGGATAAAATAGGTCGC 59.997 47.826 0.00 0.00 0.00 5.19
834 835 3.875134 CCAAACGGATAAAATAGGTCGCT 59.125 43.478 0.00 0.00 0.00 4.93
835 836 4.260620 CCAAACGGATAAAATAGGTCGCTG 60.261 45.833 0.00 0.00 0.00 5.18
836 837 3.107642 ACGGATAAAATAGGTCGCTGG 57.892 47.619 0.00 0.00 0.00 4.85
837 838 2.224209 ACGGATAAAATAGGTCGCTGGG 60.224 50.000 0.00 0.00 0.00 4.45
838 839 2.224209 CGGATAAAATAGGTCGCTGGGT 60.224 50.000 0.00 0.00 0.00 4.51
839 840 3.743269 CGGATAAAATAGGTCGCTGGGTT 60.743 47.826 0.00 0.00 0.00 4.11
840 841 3.564225 GGATAAAATAGGTCGCTGGGTTG 59.436 47.826 0.00 0.00 0.00 3.77
841 842 1.834188 AAAATAGGTCGCTGGGTTGG 58.166 50.000 0.00 0.00 0.00 3.77
842 843 0.988832 AAATAGGTCGCTGGGTTGGA 59.011 50.000 0.00 0.00 0.00 3.53
843 844 0.541863 AATAGGTCGCTGGGTTGGAG 59.458 55.000 0.00 0.00 0.00 3.86
844 845 0.617820 ATAGGTCGCTGGGTTGGAGT 60.618 55.000 0.00 0.00 0.00 3.85
845 846 0.834687 TAGGTCGCTGGGTTGGAGTT 60.835 55.000 0.00 0.00 0.00 3.01
846 847 1.966451 GGTCGCTGGGTTGGAGTTG 60.966 63.158 0.00 0.00 0.00 3.16
847 848 2.281484 TCGCTGGGTTGGAGTTGC 60.281 61.111 0.00 0.00 0.00 4.17
848 849 2.281761 CGCTGGGTTGGAGTTGCT 60.282 61.111 0.00 0.00 0.00 3.91
849 850 2.328099 CGCTGGGTTGGAGTTGCTC 61.328 63.158 0.00 0.00 0.00 4.26
850 851 1.073897 GCTGGGTTGGAGTTGCTCT 59.926 57.895 0.00 0.00 0.00 4.09
851 852 0.324943 GCTGGGTTGGAGTTGCTCTA 59.675 55.000 0.00 0.00 0.00 2.43
852 853 1.271379 GCTGGGTTGGAGTTGCTCTAA 60.271 52.381 0.00 0.00 0.00 2.10
853 854 2.619074 GCTGGGTTGGAGTTGCTCTAAT 60.619 50.000 0.00 0.00 33.81 1.73
854 855 3.370527 GCTGGGTTGGAGTTGCTCTAATA 60.371 47.826 0.00 0.00 33.81 0.98
855 856 4.843728 CTGGGTTGGAGTTGCTCTAATAA 58.156 43.478 0.00 0.00 33.81 1.40
856 857 5.249780 TGGGTTGGAGTTGCTCTAATAAA 57.750 39.130 0.00 0.00 33.81 1.40
857 858 5.826643 TGGGTTGGAGTTGCTCTAATAAAT 58.173 37.500 0.00 0.00 33.81 1.40
858 859 6.252995 TGGGTTGGAGTTGCTCTAATAAATT 58.747 36.000 0.00 0.00 33.81 1.82
859 860 6.377146 TGGGTTGGAGTTGCTCTAATAAATTC 59.623 38.462 0.00 0.00 33.81 2.17
860 861 6.377146 GGGTTGGAGTTGCTCTAATAAATTCA 59.623 38.462 0.00 0.00 33.81 2.57
861 862 7.093945 GGGTTGGAGTTGCTCTAATAAATTCAA 60.094 37.037 0.00 0.00 33.81 2.69
862 863 8.303876 GGTTGGAGTTGCTCTAATAAATTCAAA 58.696 33.333 0.00 0.00 33.81 2.69
863 864 9.129209 GTTGGAGTTGCTCTAATAAATTCAAAC 57.871 33.333 0.00 0.00 33.81 2.93
864 865 7.526608 TGGAGTTGCTCTAATAAATTCAAACG 58.473 34.615 0.00 0.00 0.00 3.60
865 866 6.469275 GGAGTTGCTCTAATAAATTCAAACGC 59.531 38.462 0.00 0.00 0.00 4.84
866 867 6.908825 AGTTGCTCTAATAAATTCAAACGCA 58.091 32.000 0.00 0.00 0.00 5.24
867 868 7.538575 AGTTGCTCTAATAAATTCAAACGCAT 58.461 30.769 0.00 0.00 0.00 4.73
868 869 8.673711 AGTTGCTCTAATAAATTCAAACGCATA 58.326 29.630 0.00 0.00 0.00 3.14
869 870 9.284594 GTTGCTCTAATAAATTCAAACGCATAA 57.715 29.630 0.00 0.00 0.00 1.90
870 871 9.847706 TTGCTCTAATAAATTCAAACGCATAAA 57.152 25.926 0.00 0.00 0.00 1.40
871 872 9.502145 TGCTCTAATAAATTCAAACGCATAAAG 57.498 29.630 0.00 0.00 0.00 1.85
872 873 9.503427 GCTCTAATAAATTCAAACGCATAAAGT 57.497 29.630 0.00 0.00 0.00 2.66
879 880 7.740519 AATTCAAACGCATAAAGTAAGATGC 57.259 32.000 0.00 0.00 44.10 3.91
1045 2001 5.546499 TGGGGACACTTTAAGTACTCTGAAT 59.454 40.000 0.00 0.00 33.40 2.57
1220 2176 3.212685 CCTACTACGGGTCCTACTTCTG 58.787 54.545 0.00 0.00 0.00 3.02
1244 2200 1.412710 GATCCCCAAGTGCGACATCTA 59.587 52.381 0.00 0.00 0.00 1.98
1431 2387 0.106149 ACAAGTTCTTCCGGCTCGTT 59.894 50.000 0.00 0.00 0.00 3.85
1546 2503 7.899973 AGAAAGTAGAATCCATTTTTGCATGT 58.100 30.769 0.00 0.00 0.00 3.21
1688 2645 4.513442 TCACCCTAAAAATCATCTGGTCG 58.487 43.478 0.00 0.00 0.00 4.79
1956 2913 2.745884 CGCTTCGGGCCATCAACA 60.746 61.111 4.39 0.00 37.74 3.33
2373 3339 8.822652 AACATACACAGGTTTGTTACTAGTAC 57.177 34.615 0.91 0.00 44.06 2.73
2374 3340 8.186709 ACATACACAGGTTTGTTACTAGTACT 57.813 34.615 0.91 0.00 36.00 2.73
2375 3341 9.300681 ACATACACAGGTTTGTTACTAGTACTA 57.699 33.333 0.91 1.89 36.00 1.82
2395 3361 8.154856 AGTACTATTTGGTTTAGTTCAGCTTCA 58.845 33.333 0.00 0.00 32.35 3.02
2493 3473 7.013369 TCGATTAGGCAGACGCATTCTATATAT 59.987 37.037 0.00 0.00 41.24 0.86
2494 3474 8.290325 CGATTAGGCAGACGCATTCTATATATA 58.710 37.037 0.00 0.00 41.24 0.86
2519 3499 8.168790 AGTACGTAGTTTCTTCTTCTTCTTCT 57.831 34.615 0.00 0.00 37.78 2.85
2590 3739 3.740832 GCAATTGCAAGTTCCTAACCAAC 59.259 43.478 25.36 0.00 41.59 3.77
2640 3942 0.543410 TCCTCTACGCTCCCCACAAA 60.543 55.000 0.00 0.00 0.00 2.83
2641 3943 0.323629 CCTCTACGCTCCCCACAAAA 59.676 55.000 0.00 0.00 0.00 2.44
2653 3955 1.328279 CCACAAAAGACTTCCACCCC 58.672 55.000 0.00 0.00 0.00 4.95
2677 3979 1.443828 GGATTCTCCGCCTCCAGTC 59.556 63.158 0.00 0.00 0.00 3.51
2715 4017 2.487762 TGCCTCGTCTTTTATGGCTTTG 59.512 45.455 0.00 0.00 43.57 2.77
2765 4067 1.209747 CCTACTGGTGAAAGGGCTACC 59.790 57.143 0.00 0.00 35.05 3.18
2791 4093 7.600752 CACTTGGTTTTTAGGTGTTTTTCTGAA 59.399 33.333 0.00 0.00 0.00 3.02
2885 4187 3.706373 CCTGGCCGTGCACCTAGT 61.706 66.667 12.15 0.00 0.00 2.57
2889 4191 0.973496 TGGCCGTGCACCTAGTATCA 60.973 55.000 12.15 0.00 0.00 2.15
2919 4221 1.733399 GTCGAGGTGTGTCTTCGCC 60.733 63.158 0.00 0.00 43.69 5.54
2931 4233 0.038067 TCTTCGCCGGATTTGTTCGA 60.038 50.000 5.05 0.00 0.00 3.71
2968 4270 6.352516 GTGGATCTACTTGGATCATGTCTTT 58.647 40.000 1.27 0.00 42.63 2.52
2976 4278 3.334691 TGGATCATGTCTTTGTTCGTCC 58.665 45.455 0.00 0.00 0.00 4.79
3038 4353 3.705043 TCTCTTTATCGGCTACGGTTC 57.295 47.619 0.00 0.00 41.39 3.62
3146 4462 0.250038 GCTGACACACCTTCTGCTCA 60.250 55.000 0.00 0.00 35.62 4.26
3156 4472 3.077359 ACCTTCTGCTCATTGCTTGTAC 58.923 45.455 0.00 0.00 43.37 2.90
3162 4478 3.076621 TGCTCATTGCTTGTACTCCTTG 58.923 45.455 0.00 0.00 43.37 3.61
3176 4492 2.824341 ACTCCTTGTTAGGTGGTCTACG 59.176 50.000 0.00 0.00 42.60 3.51
3177 4493 3.087031 CTCCTTGTTAGGTGGTCTACGA 58.913 50.000 0.00 0.00 42.60 3.43
3178 4494 3.087031 TCCTTGTTAGGTGGTCTACGAG 58.913 50.000 0.00 0.00 42.60 4.18
3295 4611 2.223845 ACGGCGTTACAATTACACAACC 59.776 45.455 6.77 0.00 0.00 3.77
3296 4612 2.481185 CGGCGTTACAATTACACAACCT 59.519 45.455 0.00 0.00 0.00 3.50
3324 4640 2.686558 TCAAACGCTTAGCTTGCTTG 57.313 45.000 1.76 0.00 0.00 4.01
3331 4647 0.322816 CTTAGCTTGCTTGGAGGGCA 60.323 55.000 0.00 0.00 37.97 5.36
3334 4650 1.980772 GCTTGCTTGGAGGGCATGT 60.981 57.895 0.00 0.00 39.54 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.010817 GTTGCTTTGTTCGCGCCTG 61.011 57.895 0.00 0.00 0.00 4.85
2 3 2.025441 TGTTGCTTTGTTCGCGCC 59.975 55.556 0.00 0.00 0.00 6.53
3 4 2.292916 GGTGTTGCTTTGTTCGCGC 61.293 57.895 0.00 0.00 0.00 6.86
4 5 1.063327 TGGTGTTGCTTTGTTCGCG 59.937 52.632 0.00 0.00 0.00 5.87
5 6 0.179150 TGTGGTGTTGCTTTGTTCGC 60.179 50.000 0.00 0.00 0.00 4.70
6 7 1.135546 TGTGTGGTGTTGCTTTGTTCG 60.136 47.619 0.00 0.00 0.00 3.95
9 10 1.404047 GCTTGTGTGGTGTTGCTTTGT 60.404 47.619 0.00 0.00 0.00 2.83
10 11 1.280066 GCTTGTGTGGTGTTGCTTTG 58.720 50.000 0.00 0.00 0.00 2.77
11 12 0.894141 TGCTTGTGTGGTGTTGCTTT 59.106 45.000 0.00 0.00 0.00 3.51
12 13 0.173255 GTGCTTGTGTGGTGTTGCTT 59.827 50.000 0.00 0.00 0.00 3.91
13 14 1.666209 GGTGCTTGTGTGGTGTTGCT 61.666 55.000 0.00 0.00 0.00 3.91
14 15 1.226945 GGTGCTTGTGTGGTGTTGC 60.227 57.895 0.00 0.00 0.00 4.17
15 16 0.817013 AAGGTGCTTGTGTGGTGTTG 59.183 50.000 0.00 0.00 0.00 3.33
16 17 1.102978 GAAGGTGCTTGTGTGGTGTT 58.897 50.000 0.00 0.00 0.00 3.32
17 18 0.255890 AGAAGGTGCTTGTGTGGTGT 59.744 50.000 0.00 0.00 0.00 4.16
18 19 0.947244 GAGAAGGTGCTTGTGTGGTG 59.053 55.000 0.00 0.00 0.00 4.17
19 20 0.839946 AGAGAAGGTGCTTGTGTGGT 59.160 50.000 0.00 0.00 0.00 4.16
20 21 1.233019 CAGAGAAGGTGCTTGTGTGG 58.767 55.000 0.00 0.00 27.31 4.17
21 22 0.590195 GCAGAGAAGGTGCTTGTGTG 59.410 55.000 0.00 0.00 37.96 3.82
22 23 0.181114 TGCAGAGAAGGTGCTTGTGT 59.819 50.000 0.00 0.00 41.78 3.72
23 24 0.590195 GTGCAGAGAAGGTGCTTGTG 59.410 55.000 0.00 0.00 41.78 3.33
24 25 0.882042 CGTGCAGAGAAGGTGCTTGT 60.882 55.000 0.00 0.00 41.78 3.16
25 26 1.864862 CGTGCAGAGAAGGTGCTTG 59.135 57.895 0.00 0.00 41.78 4.01
26 27 1.963338 GCGTGCAGAGAAGGTGCTT 60.963 57.895 0.00 0.00 41.78 3.91
27 28 2.358003 GCGTGCAGAGAAGGTGCT 60.358 61.111 0.00 0.00 41.78 4.40
28 29 3.782244 CGCGTGCAGAGAAGGTGC 61.782 66.667 0.00 0.00 41.59 5.01
29 30 3.782244 GCGCGTGCAGAGAAGGTG 61.782 66.667 17.66 0.00 42.15 4.00
48 49 3.068691 TTGAGGCGGAGGAGACGG 61.069 66.667 0.00 0.00 0.00 4.79
49 50 2.182030 GTTGAGGCGGAGGAGACG 59.818 66.667 0.00 0.00 0.00 4.18
50 51 2.182030 CGTTGAGGCGGAGGAGAC 59.818 66.667 0.00 0.00 0.00 3.36
51 52 3.760035 GCGTTGAGGCGGAGGAGA 61.760 66.667 0.00 0.00 0.00 3.71
52 53 4.821589 GGCGTTGAGGCGGAGGAG 62.822 72.222 0.00 0.00 35.04 3.69
120 121 4.749310 AGCGAAGAGGCACAGCGG 62.749 66.667 0.00 0.00 34.64 5.52
121 122 3.184683 GAGCGAAGAGGCACAGCG 61.185 66.667 0.00 0.00 34.64 5.18
122 123 2.817396 GGAGCGAAGAGGCACAGC 60.817 66.667 0.00 0.00 34.64 4.40
123 124 2.125350 GGGAGCGAAGAGGCACAG 60.125 66.667 0.00 0.00 34.64 3.66
124 125 3.706373 GGGGAGCGAAGAGGCACA 61.706 66.667 0.00 0.00 34.64 4.57
125 126 2.932130 GATGGGGAGCGAAGAGGCAC 62.932 65.000 0.00 0.00 34.64 5.01
126 127 2.688666 ATGGGGAGCGAAGAGGCA 60.689 61.111 0.00 0.00 34.64 4.75
127 128 2.110006 GATGGGGAGCGAAGAGGC 59.890 66.667 0.00 0.00 0.00 4.70
128 129 2.419198 CGATGGGGAGCGAAGAGG 59.581 66.667 0.00 0.00 0.00 3.69
129 130 2.279784 GCGATGGGGAGCGAAGAG 60.280 66.667 0.00 0.00 0.00 2.85
130 131 3.849951 GGCGATGGGGAGCGAAGA 61.850 66.667 0.00 0.00 0.00 2.87
195 196 2.165301 GCGTGTCCTATGTCGGCAC 61.165 63.158 0.00 0.00 0.00 5.01
196 197 2.183300 GCGTGTCCTATGTCGGCA 59.817 61.111 0.00 0.00 0.00 5.69
197 198 1.878522 CTGCGTGTCCTATGTCGGC 60.879 63.158 0.00 0.00 0.00 5.54
198 199 1.226974 CCTGCGTGTCCTATGTCGG 60.227 63.158 0.00 0.00 0.00 4.79
199 200 0.802222 CACCTGCGTGTCCTATGTCG 60.802 60.000 0.00 0.00 35.10 4.35
200 201 3.050703 CACCTGCGTGTCCTATGTC 57.949 57.895 0.00 0.00 35.10 3.06
209 210 2.807045 GAGCTCGACACCTGCGTG 60.807 66.667 0.00 0.00 46.11 5.34
210 211 4.057428 GGAGCTCGACACCTGCGT 62.057 66.667 7.83 0.00 0.00 5.24
211 212 3.978723 CTGGAGCTCGACACCTGCG 62.979 68.421 7.83 0.00 0.00 5.18
212 213 2.125753 CTGGAGCTCGACACCTGC 60.126 66.667 7.83 0.00 0.00 4.85
213 214 2.125753 GCTGGAGCTCGACACCTG 60.126 66.667 7.83 0.00 38.21 4.00
214 215 3.386237 GGCTGGAGCTCGACACCT 61.386 66.667 7.83 0.00 41.70 4.00
215 216 4.803426 CGGCTGGAGCTCGACACC 62.803 72.222 7.83 5.34 41.70 4.16
233 234 3.989698 ATCTCGTGTTCTGCGGCGG 62.990 63.158 9.78 1.35 0.00 6.13
234 235 2.507102 ATCTCGTGTTCTGCGGCG 60.507 61.111 0.51 0.51 0.00 6.46
235 236 2.167861 GGATCTCGTGTTCTGCGGC 61.168 63.158 0.00 0.00 0.00 6.53
236 237 0.803768 CTGGATCTCGTGTTCTGCGG 60.804 60.000 0.00 0.00 0.00 5.69
237 238 0.109086 ACTGGATCTCGTGTTCTGCG 60.109 55.000 0.00 0.00 0.00 5.18
238 239 2.941453 TACTGGATCTCGTGTTCTGC 57.059 50.000 0.00 0.00 0.00 4.26
239 240 4.703645 TCTTACTGGATCTCGTGTTCTG 57.296 45.455 0.00 0.00 0.00 3.02
240 241 5.419155 TCAATCTTACTGGATCTCGTGTTCT 59.581 40.000 0.00 0.00 0.00 3.01
241 242 5.651530 TCAATCTTACTGGATCTCGTGTTC 58.348 41.667 0.00 0.00 0.00 3.18
242 243 5.661056 TCAATCTTACTGGATCTCGTGTT 57.339 39.130 0.00 0.00 0.00 3.32
243 244 5.595885 CATCAATCTTACTGGATCTCGTGT 58.404 41.667 0.00 0.00 0.00 4.49
244 245 4.447054 GCATCAATCTTACTGGATCTCGTG 59.553 45.833 0.00 0.00 0.00 4.35
245 246 4.100035 TGCATCAATCTTACTGGATCTCGT 59.900 41.667 0.00 0.00 0.00 4.18
246 247 4.625028 TGCATCAATCTTACTGGATCTCG 58.375 43.478 0.00 0.00 0.00 4.04
247 248 5.609423 ACTGCATCAATCTTACTGGATCTC 58.391 41.667 0.00 0.00 0.00 2.75
248 249 5.627182 ACTGCATCAATCTTACTGGATCT 57.373 39.130 0.00 0.00 0.00 2.75
249 250 5.819379 TCAACTGCATCAATCTTACTGGATC 59.181 40.000 0.00 0.00 0.00 3.36
250 251 5.748402 TCAACTGCATCAATCTTACTGGAT 58.252 37.500 0.00 0.00 0.00 3.41
251 252 5.164620 TCAACTGCATCAATCTTACTGGA 57.835 39.130 0.00 0.00 0.00 3.86
252 253 5.675575 GCTTCAACTGCATCAATCTTACTGG 60.676 44.000 0.00 0.00 0.00 4.00
253 254 5.330295 GCTTCAACTGCATCAATCTTACTG 58.670 41.667 0.00 0.00 0.00 2.74
254 255 4.397417 GGCTTCAACTGCATCAATCTTACT 59.603 41.667 0.00 0.00 0.00 2.24
255 256 4.156556 TGGCTTCAACTGCATCAATCTTAC 59.843 41.667 0.00 0.00 0.00 2.34
256 257 4.156556 GTGGCTTCAACTGCATCAATCTTA 59.843 41.667 0.00 0.00 0.00 2.10
257 258 3.057033 GTGGCTTCAACTGCATCAATCTT 60.057 43.478 0.00 0.00 0.00 2.40
258 259 2.490903 GTGGCTTCAACTGCATCAATCT 59.509 45.455 0.00 0.00 0.00 2.40
259 260 2.416431 GGTGGCTTCAACTGCATCAATC 60.416 50.000 0.00 0.00 0.00 2.67
260 261 1.547372 GGTGGCTTCAACTGCATCAAT 59.453 47.619 0.00 0.00 0.00 2.57
261 262 0.961019 GGTGGCTTCAACTGCATCAA 59.039 50.000 0.00 0.00 0.00 2.57
262 263 0.178995 TGGTGGCTTCAACTGCATCA 60.179 50.000 0.00 0.00 0.00 3.07
263 264 0.524862 CTGGTGGCTTCAACTGCATC 59.475 55.000 0.00 0.00 0.00 3.91
264 265 2.649831 CTGGTGGCTTCAACTGCAT 58.350 52.632 0.00 0.00 0.00 3.96
265 266 4.162592 CTGGTGGCTTCAACTGCA 57.837 55.556 0.00 0.00 0.00 4.41
266 267 2.647297 GCTGGTGGCTTCAACTGC 59.353 61.111 0.00 0.00 43.74 4.40
267 268 1.108727 TTGGCTGGTGGCTTCAACTG 61.109 55.000 0.00 0.00 41.46 3.16
268 269 0.825010 CTTGGCTGGTGGCTTCAACT 60.825 55.000 0.00 0.00 41.46 3.16
269 270 1.662044 CTTGGCTGGTGGCTTCAAC 59.338 57.895 0.00 0.00 41.46 3.18
270 271 2.202395 GCTTGGCTGGTGGCTTCAA 61.202 57.895 0.00 0.00 41.46 2.69
271 272 2.598394 GCTTGGCTGGTGGCTTCA 60.598 61.111 0.00 0.00 41.46 3.02
272 273 3.376918 GGCTTGGCTGGTGGCTTC 61.377 66.667 0.00 0.00 41.46 3.86
276 277 3.072468 CATGGGCTTGGCTGGTGG 61.072 66.667 0.00 0.00 0.00 4.61
277 278 2.036098 TCATGGGCTTGGCTGGTG 59.964 61.111 0.00 0.00 0.00 4.17
278 279 2.036256 GTCATGGGCTTGGCTGGT 59.964 61.111 0.00 0.00 0.00 4.00
279 280 2.757099 GGTCATGGGCTTGGCTGG 60.757 66.667 0.00 0.00 0.00 4.85
280 281 2.036098 TGGTCATGGGCTTGGCTG 59.964 61.111 0.00 0.00 0.00 4.85
281 282 2.036256 GTGGTCATGGGCTTGGCT 59.964 61.111 0.00 0.00 0.00 4.75
282 283 3.070576 GGTGGTCATGGGCTTGGC 61.071 66.667 0.00 0.00 0.00 4.52
283 284 1.679977 CAGGTGGTCATGGGCTTGG 60.680 63.158 0.00 0.00 0.00 3.61
284 285 0.327924 TACAGGTGGTCATGGGCTTG 59.672 55.000 0.00 0.00 0.00 4.01
285 286 0.328258 GTACAGGTGGTCATGGGCTT 59.672 55.000 0.00 0.00 0.00 4.35
286 287 0.840288 TGTACAGGTGGTCATGGGCT 60.840 55.000 0.00 0.00 0.00 5.19
287 288 0.676782 GTGTACAGGTGGTCATGGGC 60.677 60.000 0.00 0.00 0.00 5.36
288 289 0.391130 CGTGTACAGGTGGTCATGGG 60.391 60.000 7.41 0.00 0.00 4.00
289 290 0.391130 CCGTGTACAGGTGGTCATGG 60.391 60.000 14.08 0.00 31.76 3.66
290 291 0.391130 CCCGTGTACAGGTGGTCATG 60.391 60.000 14.08 0.00 0.00 3.07
291 292 0.543410 TCCCGTGTACAGGTGGTCAT 60.543 55.000 14.08 0.00 0.00 3.06
292 293 1.152504 TCCCGTGTACAGGTGGTCA 60.153 57.895 14.08 0.00 0.00 4.02
293 294 1.590147 CTCCCGTGTACAGGTGGTC 59.410 63.158 14.08 0.00 0.00 4.02
294 295 1.911766 CCTCCCGTGTACAGGTGGT 60.912 63.158 14.08 0.00 33.04 4.16
295 296 2.978824 CCTCCCGTGTACAGGTGG 59.021 66.667 14.08 13.86 0.00 4.61
296 297 2.264794 GCCTCCCGTGTACAGGTG 59.735 66.667 14.08 3.25 0.00 4.00
297 298 3.001406 GGCCTCCCGTGTACAGGT 61.001 66.667 14.08 0.00 0.00 4.00
298 299 2.367202 ATGGCCTCCCGTGTACAGG 61.367 63.158 3.32 8.61 0.00 4.00
299 300 1.153369 CATGGCCTCCCGTGTACAG 60.153 63.158 3.32 0.00 42.18 2.74
300 301 2.986290 CATGGCCTCCCGTGTACA 59.014 61.111 3.32 0.00 42.18 2.90
306 307 4.530857 GTCGGACATGGCCTCCCG 62.531 72.222 17.64 15.96 43.02 5.14
307 308 2.966732 TTGTCGGACATGGCCTCCC 61.967 63.158 17.64 3.34 0.00 4.30
308 309 1.745489 GTTGTCGGACATGGCCTCC 60.745 63.158 17.64 6.19 0.00 4.30
309 310 1.745489 GGTTGTCGGACATGGCCTC 60.745 63.158 17.64 9.41 0.00 4.70
310 311 2.351276 GGTTGTCGGACATGGCCT 59.649 61.111 17.64 0.00 0.00 5.19
311 312 3.124921 CGGTTGTCGGACATGGCC 61.125 66.667 7.86 7.86 34.75 5.36
312 313 3.799755 GCGGTTGTCGGACATGGC 61.800 66.667 12.26 11.59 39.69 4.40
313 314 3.124921 GGCGGTTGTCGGACATGG 61.125 66.667 12.26 5.53 39.69 3.66
314 315 3.487202 CGGCGGTTGTCGGACATG 61.487 66.667 12.26 6.43 40.20 3.21
321 322 3.799755 GGTGATGCGGCGGTTGTC 61.800 66.667 9.78 0.00 0.00 3.18
322 323 3.918253 ATGGTGATGCGGCGGTTGT 62.918 57.895 9.78 0.00 0.00 3.32
323 324 3.133464 ATGGTGATGCGGCGGTTG 61.133 61.111 9.78 0.00 0.00 3.77
324 325 3.133464 CATGGTGATGCGGCGGTT 61.133 61.111 9.78 0.00 0.00 4.44
329 330 2.520020 ATGGCCATGGTGATGCGG 60.520 61.111 20.04 0.00 0.00 5.69
330 331 2.900167 CGATGGCCATGGTGATGCG 61.900 63.158 26.56 14.91 0.00 4.73
331 332 1.526686 TCGATGGCCATGGTGATGC 60.527 57.895 26.56 5.51 0.00 3.91
332 333 1.168407 GGTCGATGGCCATGGTGATG 61.168 60.000 26.56 5.66 0.00 3.07
333 334 1.149174 GGTCGATGGCCATGGTGAT 59.851 57.895 26.56 0.00 0.00 3.06
334 335 2.297129 TGGTCGATGGCCATGGTGA 61.297 57.895 26.56 15.35 0.00 4.02
335 336 2.114670 GTGGTCGATGGCCATGGTG 61.115 63.158 26.56 13.03 38.40 4.17
336 337 2.272146 GTGGTCGATGGCCATGGT 59.728 61.111 26.56 0.00 38.40 3.55
337 338 2.896854 CGTGGTCGATGGCCATGG 60.897 66.667 26.56 23.43 38.88 3.66
338 339 1.884464 CTCGTGGTCGATGGCCATG 60.884 63.158 26.56 15.66 45.21 3.66
339 340 2.501128 CTCGTGGTCGATGGCCAT 59.499 61.111 20.96 20.96 45.21 4.40
340 341 4.451150 GCTCGTGGTCGATGGCCA 62.451 66.667 8.56 8.56 45.21 5.36
347 348 2.278206 CATCTCGGCTCGTGGTCG 60.278 66.667 0.00 0.00 45.40 4.79
348 349 2.583593 GCATCTCGGCTCGTGGTC 60.584 66.667 0.00 0.00 0.00 4.02
349 350 3.381983 TGCATCTCGGCTCGTGGT 61.382 61.111 0.00 0.00 34.04 4.16
350 351 2.887568 GTGCATCTCGGCTCGTGG 60.888 66.667 0.00 0.00 34.04 4.94
351 352 3.250323 CGTGCATCTCGGCTCGTG 61.250 66.667 0.00 0.00 43.46 4.35
354 355 2.959071 GCTCGTGCATCTCGGCTC 60.959 66.667 4.26 0.00 39.41 4.70
355 356 3.763356 TGCTCGTGCATCTCGGCT 61.763 61.111 8.30 0.00 45.31 5.52
365 366 4.624364 TGCCACCTGGTGCTCGTG 62.624 66.667 21.47 8.41 37.57 4.35
366 367 4.320456 CTGCCACCTGGTGCTCGT 62.320 66.667 21.47 0.00 37.57 4.18
367 368 4.320456 ACTGCCACCTGGTGCTCG 62.320 66.667 21.47 12.65 37.57 5.03
368 369 2.670934 CACTGCCACCTGGTGCTC 60.671 66.667 21.47 14.66 37.57 4.26
371 372 2.981909 CTGCACTGCCACCTGGTG 60.982 66.667 20.01 20.01 37.57 4.17
372 373 3.170672 TCTGCACTGCCACCTGGT 61.171 61.111 0.00 0.00 37.57 4.00
373 374 2.359602 CTCTGCACTGCCACCTGG 60.360 66.667 0.00 0.00 38.53 4.45
374 375 3.054503 GCTCTGCACTGCCACCTG 61.055 66.667 0.00 0.00 0.00 4.00
375 376 3.548306 CTGCTCTGCACTGCCACCT 62.548 63.158 0.00 0.00 33.79 4.00
376 377 3.054503 CTGCTCTGCACTGCCACC 61.055 66.667 0.00 0.00 33.79 4.61
377 378 3.054503 CCTGCTCTGCACTGCCAC 61.055 66.667 0.00 0.00 33.79 5.01
378 379 4.340246 CCCTGCTCTGCACTGCCA 62.340 66.667 0.00 0.00 33.79 4.92
379 380 3.557903 TTCCCTGCTCTGCACTGCC 62.558 63.158 0.00 0.00 33.79 4.85
380 381 2.033141 TTCCCTGCTCTGCACTGC 59.967 61.111 0.00 0.00 33.79 4.40
381 382 1.376942 CCTTCCCTGCTCTGCACTG 60.377 63.158 0.00 0.00 33.79 3.66
382 383 3.076092 CCTTCCCTGCTCTGCACT 58.924 61.111 0.00 0.00 33.79 4.40
383 384 2.749441 GCCTTCCCTGCTCTGCAC 60.749 66.667 0.00 0.00 33.79 4.57
384 385 2.609534 ATGCCTTCCCTGCTCTGCA 61.610 57.895 0.00 0.00 36.92 4.41
385 386 2.119655 CATGCCTTCCCTGCTCTGC 61.120 63.158 0.00 0.00 0.00 4.26
386 387 2.119655 GCATGCCTTCCCTGCTCTG 61.120 63.158 6.36 0.00 33.15 3.35
387 388 2.274760 GCATGCCTTCCCTGCTCT 59.725 61.111 6.36 0.00 33.15 4.09
388 389 2.044650 TGCATGCCTTCCCTGCTC 60.045 61.111 16.68 0.00 36.84 4.26
389 390 2.044252 CTGCATGCCTTCCCTGCT 60.044 61.111 16.68 0.00 36.84 4.24
390 391 3.145551 CCTGCATGCCTTCCCTGC 61.146 66.667 16.68 0.00 36.45 4.85
391 392 1.453379 CTCCTGCATGCCTTCCCTG 60.453 63.158 16.68 0.00 0.00 4.45
392 393 0.992431 ATCTCCTGCATGCCTTCCCT 60.992 55.000 16.68 0.00 0.00 4.20
393 394 0.822532 CATCTCCTGCATGCCTTCCC 60.823 60.000 16.68 0.00 0.00 3.97
394 395 0.106819 ACATCTCCTGCATGCCTTCC 60.107 55.000 16.68 0.00 0.00 3.46
395 396 1.307097 GACATCTCCTGCATGCCTTC 58.693 55.000 16.68 0.00 0.00 3.46
396 397 0.463295 CGACATCTCCTGCATGCCTT 60.463 55.000 16.68 0.00 0.00 4.35
397 398 1.145598 CGACATCTCCTGCATGCCT 59.854 57.895 16.68 0.00 0.00 4.75
398 399 0.879400 CTCGACATCTCCTGCATGCC 60.879 60.000 16.68 0.00 0.00 4.40
399 400 0.879400 CCTCGACATCTCCTGCATGC 60.879 60.000 11.82 11.82 0.00 4.06
400 401 0.749049 TCCTCGACATCTCCTGCATG 59.251 55.000 0.00 0.00 0.00 4.06
401 402 1.039068 CTCCTCGACATCTCCTGCAT 58.961 55.000 0.00 0.00 0.00 3.96
402 403 1.039785 CCTCCTCGACATCTCCTGCA 61.040 60.000 0.00 0.00 0.00 4.41
403 404 1.739049 CCTCCTCGACATCTCCTGC 59.261 63.158 0.00 0.00 0.00 4.85
404 405 1.039785 TGCCTCCTCGACATCTCCTG 61.040 60.000 0.00 0.00 0.00 3.86
405 406 1.040339 GTGCCTCCTCGACATCTCCT 61.040 60.000 0.00 0.00 0.00 3.69
406 407 1.323271 TGTGCCTCCTCGACATCTCC 61.323 60.000 0.00 0.00 0.00 3.71
407 408 0.749649 ATGTGCCTCCTCGACATCTC 59.250 55.000 0.00 0.00 0.00 2.75
408 409 1.198713 AATGTGCCTCCTCGACATCT 58.801 50.000 0.00 0.00 29.93 2.90
409 410 2.362397 TCTAATGTGCCTCCTCGACATC 59.638 50.000 0.00 0.00 29.93 3.06
410 411 2.388735 TCTAATGTGCCTCCTCGACAT 58.611 47.619 0.00 0.00 31.54 3.06
411 412 1.847328 TCTAATGTGCCTCCTCGACA 58.153 50.000 0.00 0.00 0.00 4.35
412 413 2.961526 TTCTAATGTGCCTCCTCGAC 57.038 50.000 0.00 0.00 0.00 4.20
413 414 2.418746 GCTTTCTAATGTGCCTCCTCGA 60.419 50.000 0.00 0.00 0.00 4.04
414 415 1.936547 GCTTTCTAATGTGCCTCCTCG 59.063 52.381 0.00 0.00 0.00 4.63
415 416 1.936547 CGCTTTCTAATGTGCCTCCTC 59.063 52.381 0.00 0.00 0.00 3.71
416 417 2.014068 GCGCTTTCTAATGTGCCTCCT 61.014 52.381 0.00 0.00 34.61 3.69
417 418 0.378610 GCGCTTTCTAATGTGCCTCC 59.621 55.000 0.00 0.00 34.61 4.30
418 419 1.063174 CTGCGCTTTCTAATGTGCCTC 59.937 52.381 9.73 0.00 38.39 4.70
419 420 1.089920 CTGCGCTTTCTAATGTGCCT 58.910 50.000 9.73 0.00 38.39 4.75
420 421 0.099436 CCTGCGCTTTCTAATGTGCC 59.901 55.000 9.73 0.00 38.39 5.01
421 422 0.524180 GCCTGCGCTTTCTAATGTGC 60.524 55.000 9.73 7.07 39.26 4.57
422 423 0.804364 TGCCTGCGCTTTCTAATGTG 59.196 50.000 9.73 0.00 35.36 3.21
423 424 1.200020 GTTGCCTGCGCTTTCTAATGT 59.800 47.619 9.73 0.00 35.36 2.71
424 425 1.199789 TGTTGCCTGCGCTTTCTAATG 59.800 47.619 9.73 0.00 35.36 1.90
425 426 1.200020 GTGTTGCCTGCGCTTTCTAAT 59.800 47.619 9.73 0.00 35.36 1.73
426 427 0.591170 GTGTTGCCTGCGCTTTCTAA 59.409 50.000 9.73 0.00 35.36 2.10
427 428 0.533978 TGTGTTGCCTGCGCTTTCTA 60.534 50.000 9.73 0.00 35.36 2.10
428 429 1.383456 TTGTGTTGCCTGCGCTTTCT 61.383 50.000 9.73 0.00 35.36 2.52
429 430 0.936297 CTTGTGTTGCCTGCGCTTTC 60.936 55.000 9.73 0.00 35.36 2.62
430 431 1.066257 CTTGTGTTGCCTGCGCTTT 59.934 52.632 9.73 0.00 35.36 3.51
431 432 2.723746 CTTGTGTTGCCTGCGCTT 59.276 55.556 9.73 0.00 35.36 4.68
432 433 3.289834 CCTTGTGTTGCCTGCGCT 61.290 61.111 9.73 0.00 35.36 5.92
433 434 3.259425 CTCCTTGTGTTGCCTGCGC 62.259 63.158 0.00 0.00 0.00 6.09
434 435 1.572085 CTCTCCTTGTGTTGCCTGCG 61.572 60.000 0.00 0.00 0.00 5.18
435 436 1.239968 CCTCTCCTTGTGTTGCCTGC 61.240 60.000 0.00 0.00 0.00 4.85
436 437 0.109342 ACCTCTCCTTGTGTTGCCTG 59.891 55.000 0.00 0.00 0.00 4.85
437 438 0.109342 CACCTCTCCTTGTGTTGCCT 59.891 55.000 0.00 0.00 0.00 4.75
438 439 0.890996 CCACCTCTCCTTGTGTTGCC 60.891 60.000 0.00 0.00 0.00 4.52
439 440 1.518903 GCCACCTCTCCTTGTGTTGC 61.519 60.000 0.00 0.00 0.00 4.17
440 441 1.230635 CGCCACCTCTCCTTGTGTTG 61.231 60.000 0.00 0.00 0.00 3.33
441 442 1.071471 CGCCACCTCTCCTTGTGTT 59.929 57.895 0.00 0.00 0.00 3.32
442 443 1.821061 CTCGCCACCTCTCCTTGTGT 61.821 60.000 0.00 0.00 0.00 3.72
443 444 1.079543 CTCGCCACCTCTCCTTGTG 60.080 63.158 0.00 0.00 0.00 3.33
444 445 1.228894 TCTCGCCACCTCTCCTTGT 60.229 57.895 0.00 0.00 0.00 3.16
445 446 1.515020 CTCTCGCCACCTCTCCTTG 59.485 63.158 0.00 0.00 0.00 3.61
446 447 1.684049 CCTCTCGCCACCTCTCCTT 60.684 63.158 0.00 0.00 0.00 3.36
447 448 2.043450 CCTCTCGCCACCTCTCCT 60.043 66.667 0.00 0.00 0.00 3.69
448 449 3.844090 GCCTCTCGCCACCTCTCC 61.844 72.222 0.00 0.00 0.00 3.71
449 450 2.172483 TTTGCCTCTCGCCACCTCTC 62.172 60.000 0.00 0.00 36.24 3.20
450 451 1.557269 ATTTGCCTCTCGCCACCTCT 61.557 55.000 0.00 0.00 36.24 3.69
451 452 1.078143 ATTTGCCTCTCGCCACCTC 60.078 57.895 0.00 0.00 36.24 3.85
452 453 1.078143 GATTTGCCTCTCGCCACCT 60.078 57.895 0.00 0.00 36.24 4.00
453 454 2.464459 CGATTTGCCTCTCGCCACC 61.464 63.158 0.00 0.00 36.24 4.61
454 455 3.093278 CGATTTGCCTCTCGCCAC 58.907 61.111 0.00 0.00 36.24 5.01
464 465 0.960364 TCTCCACCAAGGCGATTTGC 60.960 55.000 0.00 0.00 45.38 3.68
465 466 1.089920 CTCTCCACCAAGGCGATTTG 58.910 55.000 0.00 0.00 37.29 2.32
466 467 0.035056 CCTCTCCACCAAGGCGATTT 60.035 55.000 0.00 0.00 37.29 2.17
467 468 1.201429 ACCTCTCCACCAAGGCGATT 61.201 55.000 0.00 0.00 36.01 3.34
468 469 0.325296 TACCTCTCCACCAAGGCGAT 60.325 55.000 0.00 0.00 36.01 4.58
469 470 0.970937 CTACCTCTCCACCAAGGCGA 60.971 60.000 0.00 0.00 36.01 5.54
470 471 1.517832 CTACCTCTCCACCAAGGCG 59.482 63.158 0.00 0.00 36.01 5.52
471 472 1.627297 CCCTACCTCTCCACCAAGGC 61.627 65.000 0.00 0.00 36.01 4.35
472 473 1.627297 GCCCTACCTCTCCACCAAGG 61.627 65.000 0.00 0.00 38.70 3.61
473 474 0.618968 AGCCCTACCTCTCCACCAAG 60.619 60.000 0.00 0.00 0.00 3.61
474 475 0.617820 GAGCCCTACCTCTCCACCAA 60.618 60.000 0.00 0.00 0.00 3.67
475 476 1.001760 GAGCCCTACCTCTCCACCA 59.998 63.158 0.00 0.00 0.00 4.17
476 477 2.128507 CGAGCCCTACCTCTCCACC 61.129 68.421 0.00 0.00 0.00 4.61
477 478 1.380112 ACGAGCCCTACCTCTCCAC 60.380 63.158 0.00 0.00 0.00 4.02
478 479 1.076923 GACGAGCCCTACCTCTCCA 60.077 63.158 0.00 0.00 0.00 3.86
479 480 2.188161 CGACGAGCCCTACCTCTCC 61.188 68.421 0.00 0.00 0.00 3.71
480 481 1.153208 TCGACGAGCCCTACCTCTC 60.153 63.158 0.00 0.00 0.00 3.20
481 482 1.153127 CTCGACGAGCCCTACCTCT 60.153 63.158 12.67 0.00 0.00 3.69
482 483 2.188161 CCTCGACGAGCCCTACCTC 61.188 68.421 19.55 0.00 0.00 3.85
483 484 2.124236 CCTCGACGAGCCCTACCT 60.124 66.667 19.55 0.00 0.00 3.08
484 485 3.217743 CCCTCGACGAGCCCTACC 61.218 72.222 19.55 0.00 0.00 3.18
485 486 3.217743 CCCCTCGACGAGCCCTAC 61.218 72.222 19.55 0.00 0.00 3.18
486 487 4.517934 CCCCCTCGACGAGCCCTA 62.518 72.222 19.55 0.00 0.00 3.53
490 491 3.069318 AACTCCCCCTCGACGAGC 61.069 66.667 19.55 0.00 0.00 5.03
491 492 0.679002 TACAACTCCCCCTCGACGAG 60.679 60.000 18.08 18.08 0.00 4.18
492 493 0.679002 CTACAACTCCCCCTCGACGA 60.679 60.000 0.00 0.00 0.00 4.20
493 494 1.664321 CCTACAACTCCCCCTCGACG 61.664 65.000 0.00 0.00 0.00 5.12
494 495 1.957765 GCCTACAACTCCCCCTCGAC 61.958 65.000 0.00 0.00 0.00 4.20
495 496 1.684734 GCCTACAACTCCCCCTCGA 60.685 63.158 0.00 0.00 0.00 4.04
496 497 2.901042 GCCTACAACTCCCCCTCG 59.099 66.667 0.00 0.00 0.00 4.63
497 498 2.901042 CGCCTACAACTCCCCCTC 59.099 66.667 0.00 0.00 0.00 4.30
498 499 3.400054 GCGCCTACAACTCCCCCT 61.400 66.667 0.00 0.00 0.00 4.79
499 500 4.832608 CGCGCCTACAACTCCCCC 62.833 72.222 0.00 0.00 0.00 5.40
500 501 2.624437 CTACGCGCCTACAACTCCCC 62.624 65.000 5.73 0.00 0.00 4.81
501 502 1.226888 CTACGCGCCTACAACTCCC 60.227 63.158 5.73 0.00 0.00 4.30
502 503 1.877165 GCTACGCGCCTACAACTCC 60.877 63.158 5.73 0.00 0.00 3.85
503 504 1.153901 TGCTACGCGCCTACAACTC 60.154 57.895 5.73 0.00 38.05 3.01
504 505 1.445582 GTGCTACGCGCCTACAACT 60.446 57.895 5.73 0.00 38.05 3.16
505 506 2.785105 CGTGCTACGCGCCTACAAC 61.785 63.158 5.73 0.00 38.05 3.32
506 507 2.505337 CGTGCTACGCGCCTACAA 60.505 61.111 5.73 0.00 38.05 2.41
507 508 4.485834 CCGTGCTACGCGCCTACA 62.486 66.667 5.73 0.00 40.91 2.74
514 515 3.651480 CTTTGCTGCCGTGCTACGC 62.651 63.158 0.00 1.25 40.91 4.42
515 516 2.476051 CTTTGCTGCCGTGCTACG 59.524 61.111 0.00 2.27 42.11 3.51
516 517 2.176792 GCTTTGCTGCCGTGCTAC 59.823 61.111 0.00 0.00 0.00 3.58
517 518 2.773397 TACGCTTTGCTGCCGTGCTA 62.773 55.000 11.07 0.00 0.00 3.49
519 520 3.651480 CTACGCTTTGCTGCCGTGC 62.651 63.158 11.07 5.13 0.00 5.34
520 521 2.476051 CTACGCTTTGCTGCCGTG 59.524 61.111 11.07 2.95 0.00 4.94
521 522 3.423154 GCTACGCTTTGCTGCCGT 61.423 61.111 6.86 6.86 0.00 5.68
522 523 4.505217 CGCTACGCTTTGCTGCCG 62.505 66.667 0.00 0.00 0.00 5.69
523 524 4.166011 CCGCTACGCTTTGCTGCC 62.166 66.667 0.00 0.00 0.00 4.85
524 525 3.118454 TCCGCTACGCTTTGCTGC 61.118 61.111 0.00 0.00 0.00 5.25
525 526 1.687494 GAGTCCGCTACGCTTTGCTG 61.687 60.000 0.00 0.00 0.00 4.41
526 527 1.446272 GAGTCCGCTACGCTTTGCT 60.446 57.895 0.00 0.00 0.00 3.91
527 528 1.084370 ATGAGTCCGCTACGCTTTGC 61.084 55.000 0.00 0.00 0.00 3.68
528 529 0.924090 GATGAGTCCGCTACGCTTTG 59.076 55.000 0.00 0.00 0.00 2.77
529 530 0.525668 CGATGAGTCCGCTACGCTTT 60.526 55.000 0.00 0.00 0.00 3.51
530 531 1.064296 CGATGAGTCCGCTACGCTT 59.936 57.895 0.00 0.00 0.00 4.68
531 532 2.716244 CGATGAGTCCGCTACGCT 59.284 61.111 0.00 0.00 0.00 5.07
532 533 2.332362 TTCCGATGAGTCCGCTACGC 62.332 60.000 0.00 0.00 0.00 4.42
533 534 0.311165 ATTCCGATGAGTCCGCTACG 59.689 55.000 0.00 0.00 0.00 3.51
534 535 1.337071 TGATTCCGATGAGTCCGCTAC 59.663 52.381 0.00 0.00 0.00 3.58
535 536 1.609072 CTGATTCCGATGAGTCCGCTA 59.391 52.381 0.00 0.00 0.00 4.26
536 537 0.387202 CTGATTCCGATGAGTCCGCT 59.613 55.000 0.00 0.00 0.00 5.52
537 538 0.103208 ACTGATTCCGATGAGTCCGC 59.897 55.000 0.00 0.00 0.00 5.54
538 539 1.598183 CGACTGATTCCGATGAGTCCG 60.598 57.143 0.00 0.00 41.69 4.79
539 540 1.269309 CCGACTGATTCCGATGAGTCC 60.269 57.143 0.00 0.00 41.69 3.85
540 541 1.866063 GCCGACTGATTCCGATGAGTC 60.866 57.143 0.00 0.00 41.42 3.36
541 542 0.103208 GCCGACTGATTCCGATGAGT 59.897 55.000 0.00 0.00 32.05 3.41
542 543 0.936764 CGCCGACTGATTCCGATGAG 60.937 60.000 0.00 0.00 0.00 2.90
543 544 1.065764 CGCCGACTGATTCCGATGA 59.934 57.895 0.00 0.00 0.00 2.92
544 545 0.030235 TACGCCGACTGATTCCGATG 59.970 55.000 0.00 0.00 0.00 3.84
545 546 0.311165 CTACGCCGACTGATTCCGAT 59.689 55.000 0.00 0.00 0.00 4.18
546 547 1.725665 CTACGCCGACTGATTCCGA 59.274 57.895 0.00 0.00 0.00 4.55
547 548 1.944676 GCTACGCCGACTGATTCCG 60.945 63.158 0.00 0.00 0.00 4.30
548 549 1.944676 CGCTACGCCGACTGATTCC 60.945 63.158 0.00 0.00 0.00 3.01
549 550 1.944676 CCGCTACGCCGACTGATTC 60.945 63.158 0.00 0.00 0.00 2.52
550 551 2.104331 CCGCTACGCCGACTGATT 59.896 61.111 0.00 0.00 0.00 2.57
551 552 4.570663 GCCGCTACGCCGACTGAT 62.571 66.667 0.00 0.00 0.00 2.90
566 567 4.785453 CTTCCCCCTGTCGCTGCC 62.785 72.222 0.00 0.00 0.00 4.85
567 568 4.785453 CCTTCCCCCTGTCGCTGC 62.785 72.222 0.00 0.00 0.00 5.25
568 569 4.101448 CCCTTCCCCCTGTCGCTG 62.101 72.222 0.00 0.00 0.00 5.18
571 572 4.733725 TCCCCCTTCCCCCTGTCG 62.734 72.222 0.00 0.00 0.00 4.35
572 573 2.692741 CTCCCCCTTCCCCCTGTC 60.693 72.222 0.00 0.00 0.00 3.51
573 574 3.216371 TCTCCCCCTTCCCCCTGT 61.216 66.667 0.00 0.00 0.00 4.00
574 575 2.367512 CTCTCCCCCTTCCCCCTG 60.368 72.222 0.00 0.00 0.00 4.45
575 576 2.543637 TCTCTCCCCCTTCCCCCT 60.544 66.667 0.00 0.00 0.00 4.79
576 577 2.040359 CTCTCTCCCCCTTCCCCC 60.040 72.222 0.00 0.00 0.00 5.40
577 578 1.074850 CTCTCTCTCCCCCTTCCCC 60.075 68.421 0.00 0.00 0.00 4.81
578 579 0.105709 CTCTCTCTCTCCCCCTTCCC 60.106 65.000 0.00 0.00 0.00 3.97
579 580 0.930726 TCTCTCTCTCTCCCCCTTCC 59.069 60.000 0.00 0.00 0.00 3.46
580 581 1.850345 TCTCTCTCTCTCTCCCCCTTC 59.150 57.143 0.00 0.00 0.00 3.46
581 582 1.852965 CTCTCTCTCTCTCTCCCCCTT 59.147 57.143 0.00 0.00 0.00 3.95
582 583 1.010793 TCTCTCTCTCTCTCTCCCCCT 59.989 57.143 0.00 0.00 0.00 4.79
583 584 1.421646 CTCTCTCTCTCTCTCTCCCCC 59.578 61.905 0.00 0.00 0.00 5.40
584 585 2.127708 ACTCTCTCTCTCTCTCTCCCC 58.872 57.143 0.00 0.00 0.00 4.81
585 586 3.054361 ACAACTCTCTCTCTCTCTCTCCC 60.054 52.174 0.00 0.00 0.00 4.30
586 587 4.222124 ACAACTCTCTCTCTCTCTCTCC 57.778 50.000 0.00 0.00 0.00 3.71
587 588 4.804139 CGTACAACTCTCTCTCTCTCTCTC 59.196 50.000 0.00 0.00 0.00 3.20
588 589 4.464951 TCGTACAACTCTCTCTCTCTCTCT 59.535 45.833 0.00 0.00 0.00 3.10
589 590 4.751060 TCGTACAACTCTCTCTCTCTCTC 58.249 47.826 0.00 0.00 0.00 3.20
590 591 4.464951 TCTCGTACAACTCTCTCTCTCTCT 59.535 45.833 0.00 0.00 0.00 3.10
591 592 4.751060 TCTCGTACAACTCTCTCTCTCTC 58.249 47.826 0.00 0.00 0.00 3.20
592 593 4.464951 TCTCTCGTACAACTCTCTCTCTCT 59.535 45.833 0.00 0.00 0.00 3.10
593 594 4.751060 TCTCTCGTACAACTCTCTCTCTC 58.249 47.826 0.00 0.00 0.00 3.20
594 595 4.382685 CCTCTCTCGTACAACTCTCTCTCT 60.383 50.000 0.00 0.00 0.00 3.10
595 596 3.869246 CCTCTCTCGTACAACTCTCTCTC 59.131 52.174 0.00 0.00 0.00 3.20
596 597 3.869065 CCTCTCTCGTACAACTCTCTCT 58.131 50.000 0.00 0.00 0.00 3.10
597 598 2.353579 GCCTCTCTCGTACAACTCTCTC 59.646 54.545 0.00 0.00 0.00 3.20
598 599 2.361789 GCCTCTCTCGTACAACTCTCT 58.638 52.381 0.00 0.00 0.00 3.10
599 600 1.062880 CGCCTCTCTCGTACAACTCTC 59.937 57.143 0.00 0.00 0.00 3.20
600 601 1.088306 CGCCTCTCTCGTACAACTCT 58.912 55.000 0.00 0.00 0.00 3.24
601 602 1.062880 CTCGCCTCTCTCGTACAACTC 59.937 57.143 0.00 0.00 0.00 3.01
602 603 1.088306 CTCGCCTCTCTCGTACAACT 58.912 55.000 0.00 0.00 0.00 3.16
603 604 1.062880 CTCTCGCCTCTCTCGTACAAC 59.937 57.143 0.00 0.00 0.00 3.32
604 605 1.066358 TCTCTCGCCTCTCTCGTACAA 60.066 52.381 0.00 0.00 0.00 2.41
605 606 0.535797 TCTCTCGCCTCTCTCGTACA 59.464 55.000 0.00 0.00 0.00 2.90
606 607 1.529438 CATCTCTCGCCTCTCTCGTAC 59.471 57.143 0.00 0.00 0.00 3.67
607 608 1.872388 CATCTCTCGCCTCTCTCGTA 58.128 55.000 0.00 0.00 0.00 3.43
608 609 1.444119 GCATCTCTCGCCTCTCTCGT 61.444 60.000 0.00 0.00 0.00 4.18
609 610 1.282570 GCATCTCTCGCCTCTCTCG 59.717 63.158 0.00 0.00 0.00 4.04
610 611 1.163420 TCGCATCTCTCGCCTCTCTC 61.163 60.000 0.00 0.00 0.00 3.20
611 612 1.153066 TCGCATCTCTCGCCTCTCT 60.153 57.895 0.00 0.00 0.00 3.10
612 613 1.282570 CTCGCATCTCTCGCCTCTC 59.717 63.158 0.00 0.00 0.00 3.20
613 614 2.844451 GCTCGCATCTCTCGCCTCT 61.844 63.158 0.00 0.00 0.00 3.69
614 615 2.354539 GCTCGCATCTCTCGCCTC 60.355 66.667 0.00 0.00 0.00 4.70
615 616 4.263209 CGCTCGCATCTCTCGCCT 62.263 66.667 0.00 0.00 0.00 5.52
636 637 2.942796 TACCAGTGACTGCGCAGGG 61.943 63.158 38.27 30.13 35.67 4.45
637 638 1.738099 GTACCAGTGACTGCGCAGG 60.738 63.158 38.27 24.23 37.23 4.85
638 639 0.390340 ATGTACCAGTGACTGCGCAG 60.390 55.000 34.89 34.89 0.00 5.18
639 640 0.670239 CATGTACCAGTGACTGCGCA 60.670 55.000 10.98 10.98 0.00 6.09
640 641 1.361668 CCATGTACCAGTGACTGCGC 61.362 60.000 7.16 0.00 0.00 6.09
641 642 0.740868 CCCATGTACCAGTGACTGCG 60.741 60.000 7.16 3.28 0.00 5.18
642 643 0.613260 TCCCATGTACCAGTGACTGC 59.387 55.000 7.16 0.00 0.00 4.40
643 644 1.066143 GGTCCCATGTACCAGTGACTG 60.066 57.143 5.42 5.42 36.96 3.51
644 645 1.276622 GGTCCCATGTACCAGTGACT 58.723 55.000 9.11 0.00 36.96 3.41
645 646 0.981183 TGGTCCCATGTACCAGTGAC 59.019 55.000 12.02 0.00 42.10 3.67
646 647 3.485214 TGGTCCCATGTACCAGTGA 57.515 52.632 12.02 0.00 42.10 3.41
650 651 1.688811 GCCTTGGTCCCATGTACCA 59.311 57.895 12.02 12.02 45.26 3.25
651 652 1.451387 CGCCTTGGTCCCATGTACC 60.451 63.158 7.39 7.39 37.53 3.34
652 653 1.451387 CCGCCTTGGTCCCATGTAC 60.451 63.158 0.00 0.00 0.00 2.90
653 654 1.613928 TCCGCCTTGGTCCCATGTA 60.614 57.895 0.00 0.00 39.52 2.29
654 655 2.933287 TCCGCCTTGGTCCCATGT 60.933 61.111 0.00 0.00 39.52 3.21
655 656 2.438434 GTCCGCCTTGGTCCCATG 60.438 66.667 0.00 0.00 39.52 3.66
656 657 2.308722 ATGTCCGCCTTGGTCCCAT 61.309 57.895 0.00 0.00 39.52 4.00
657 658 2.933287 ATGTCCGCCTTGGTCCCA 60.933 61.111 0.00 0.00 39.52 4.37
658 659 2.438434 CATGTCCGCCTTGGTCCC 60.438 66.667 0.00 0.00 39.52 4.46
659 660 1.450312 CTCATGTCCGCCTTGGTCC 60.450 63.158 0.00 0.00 39.52 4.46
660 661 1.021390 CACTCATGTCCGCCTTGGTC 61.021 60.000 0.00 0.00 39.52 4.02
661 662 1.003355 CACTCATGTCCGCCTTGGT 60.003 57.895 0.00 0.00 39.52 3.67
662 663 1.746615 CCACTCATGTCCGCCTTGG 60.747 63.158 0.00 0.00 40.09 3.61
663 664 1.021390 GTCCACTCATGTCCGCCTTG 61.021 60.000 0.00 0.00 0.00 3.61
664 665 1.296715 GTCCACTCATGTCCGCCTT 59.703 57.895 0.00 0.00 0.00 4.35
665 666 2.982130 GTCCACTCATGTCCGCCT 59.018 61.111 0.00 0.00 0.00 5.52
666 667 2.509336 CGTCCACTCATGTCCGCC 60.509 66.667 0.00 0.00 0.00 6.13
667 668 1.940883 TACCGTCCACTCATGTCCGC 61.941 60.000 0.00 0.00 0.00 5.54
668 669 0.100682 CTACCGTCCACTCATGTCCG 59.899 60.000 0.00 0.00 0.00 4.79
669 670 0.179108 GCTACCGTCCACTCATGTCC 60.179 60.000 0.00 0.00 0.00 4.02
670 671 0.525668 CGCTACCGTCCACTCATGTC 60.526 60.000 0.00 0.00 0.00 3.06
671 672 0.963856 TCGCTACCGTCCACTCATGT 60.964 55.000 0.00 0.00 35.54 3.21
672 673 0.248661 CTCGCTACCGTCCACTCATG 60.249 60.000 0.00 0.00 35.54 3.07
673 674 2.005960 GCTCGCTACCGTCCACTCAT 62.006 60.000 0.00 0.00 35.54 2.90
674 675 2.697761 GCTCGCTACCGTCCACTCA 61.698 63.158 0.00 0.00 35.54 3.41
675 676 2.102553 GCTCGCTACCGTCCACTC 59.897 66.667 0.00 0.00 35.54 3.51
676 677 3.812019 CGCTCGCTACCGTCCACT 61.812 66.667 0.00 0.00 35.54 4.00
677 678 3.807538 TCGCTCGCTACCGTCCAC 61.808 66.667 0.00 0.00 35.54 4.02
678 679 3.807538 GTCGCTCGCTACCGTCCA 61.808 66.667 0.00 0.00 35.54 4.02
679 680 4.883300 CGTCGCTCGCTACCGTCC 62.883 72.222 0.00 0.00 35.54 4.79
680 681 4.883300 CCGTCGCTCGCTACCGTC 62.883 72.222 0.00 0.00 38.35 4.79
683 684 4.253257 CTCCCGTCGCTCGCTACC 62.253 72.222 0.00 0.00 38.35 3.18
684 685 4.908877 GCTCCCGTCGCTCGCTAC 62.909 72.222 0.00 0.00 38.35 3.58
696 697 1.012086 GGATAAAAACGGACGCTCCC 58.988 55.000 0.00 0.00 31.13 4.30
697 698 1.729284 TGGATAAAAACGGACGCTCC 58.271 50.000 0.00 0.00 0.00 4.70
698 699 4.142773 TGAAATGGATAAAAACGGACGCTC 60.143 41.667 0.00 0.00 0.00 5.03
699 700 3.754323 TGAAATGGATAAAAACGGACGCT 59.246 39.130 0.00 0.00 0.00 5.07
700 701 4.086199 TGAAATGGATAAAAACGGACGC 57.914 40.909 0.00 0.00 0.00 5.19
701 702 6.196571 GGTATGAAATGGATAAAAACGGACG 58.803 40.000 0.00 0.00 0.00 4.79
702 703 6.095720 TGGGTATGAAATGGATAAAAACGGAC 59.904 38.462 0.00 0.00 0.00 4.79
703 704 6.188407 TGGGTATGAAATGGATAAAAACGGA 58.812 36.000 0.00 0.00 0.00 4.69
704 705 6.458232 TGGGTATGAAATGGATAAAAACGG 57.542 37.500 0.00 0.00 0.00 4.44
705 706 8.816144 CAAATGGGTATGAAATGGATAAAAACG 58.184 33.333 0.00 0.00 0.00 3.60
706 707 9.665719 ACAAATGGGTATGAAATGGATAAAAAC 57.334 29.630 0.00 0.00 0.00 2.43
707 708 9.664332 CACAAATGGGTATGAAATGGATAAAAA 57.336 29.630 0.00 0.00 0.00 1.94
708 709 8.263640 CCACAAATGGGTATGAAATGGATAAAA 58.736 33.333 0.00 0.00 43.04 1.52
709 710 7.790027 CCACAAATGGGTATGAAATGGATAAA 58.210 34.615 0.00 0.00 43.04 1.40
710 711 7.358770 CCACAAATGGGTATGAAATGGATAA 57.641 36.000 0.00 0.00 43.04 1.75
711 712 6.975196 CCACAAATGGGTATGAAATGGATA 57.025 37.500 0.00 0.00 43.04 2.59
712 713 5.874897 CCACAAATGGGTATGAAATGGAT 57.125 39.130 0.00 0.00 43.04 3.41
726 727 4.160065 TGGTCCAAATATGAGCCACAAATG 59.840 41.667 0.00 0.00 0.00 2.32
727 728 4.352009 TGGTCCAAATATGAGCCACAAAT 58.648 39.130 0.00 0.00 0.00 2.32
728 729 3.772387 TGGTCCAAATATGAGCCACAAA 58.228 40.909 0.00 0.00 0.00 2.83
729 730 3.448093 TGGTCCAAATATGAGCCACAA 57.552 42.857 0.00 0.00 0.00 3.33
730 731 3.245229 ACTTGGTCCAAATATGAGCCACA 60.245 43.478 5.64 0.00 32.50 4.17
731 732 3.356290 ACTTGGTCCAAATATGAGCCAC 58.644 45.455 5.64 0.00 32.50 5.01
732 733 3.737559 ACTTGGTCCAAATATGAGCCA 57.262 42.857 5.64 0.00 0.00 4.75
733 734 5.170748 CAAAACTTGGTCCAAATATGAGCC 58.829 41.667 5.64 0.00 0.00 4.70
734 735 5.170748 CCAAAACTTGGTCCAAATATGAGC 58.829 41.667 5.64 0.00 45.93 4.26
748 749 1.241315 ATCCGCCCGACCAAAACTTG 61.241 55.000 0.00 0.00 0.00 3.16
749 750 0.325602 TATCCGCCCGACCAAAACTT 59.674 50.000 0.00 0.00 0.00 2.66
750 751 0.107848 CTATCCGCCCGACCAAAACT 60.108 55.000 0.00 0.00 0.00 2.66
751 752 1.712018 GCTATCCGCCCGACCAAAAC 61.712 60.000 0.00 0.00 0.00 2.43
752 753 1.450669 GCTATCCGCCCGACCAAAA 60.451 57.895 0.00 0.00 0.00 2.44
753 754 2.188469 GCTATCCGCCCGACCAAA 59.812 61.111 0.00 0.00 0.00 3.28
754 755 3.078196 TGCTATCCGCCCGACCAA 61.078 61.111 0.00 0.00 38.05 3.67
755 756 3.536917 CTGCTATCCGCCCGACCA 61.537 66.667 0.00 0.00 38.05 4.02
756 757 4.301027 CCTGCTATCCGCCCGACC 62.301 72.222 0.00 0.00 38.05 4.79
757 758 4.971125 GCCTGCTATCCGCCCGAC 62.971 72.222 0.00 0.00 38.05 4.79
762 763 4.971125 GACCCGCCTGCTATCCGC 62.971 72.222 0.00 0.00 39.77 5.54
763 764 4.647615 CGACCCGCCTGCTATCCG 62.648 72.222 0.00 0.00 0.00 4.18
781 782 5.335348 CGAATATAAATTTGGCCTAACGGGG 60.335 44.000 3.32 0.00 35.12 5.73
782 783 5.470777 TCGAATATAAATTTGGCCTAACGGG 59.529 40.000 3.32 0.00 38.36 5.28
783 784 6.548441 TCGAATATAAATTTGGCCTAACGG 57.452 37.500 3.32 0.00 0.00 4.44
784 785 8.286800 TCATTCGAATATAAATTTGGCCTAACG 58.713 33.333 10.97 0.00 0.00 3.18
785 786 9.394477 GTCATTCGAATATAAATTTGGCCTAAC 57.606 33.333 10.97 0.00 0.00 2.34
786 787 8.573035 GGTCATTCGAATATAAATTTGGCCTAA 58.427 33.333 10.97 2.09 0.00 2.69
787 788 7.175990 GGGTCATTCGAATATAAATTTGGCCTA 59.824 37.037 10.97 0.00 28.75 3.93
788 789 6.015434 GGGTCATTCGAATATAAATTTGGCCT 60.015 38.462 10.97 0.00 28.75 5.19
789 790 6.156519 GGGTCATTCGAATATAAATTTGGCC 58.843 40.000 10.97 8.26 0.00 5.36
790 791 6.744112 TGGGTCATTCGAATATAAATTTGGC 58.256 36.000 10.97 0.00 0.00 4.52
791 792 9.030301 GTTTGGGTCATTCGAATATAAATTTGG 57.970 33.333 10.97 0.00 0.00 3.28
792 793 8.742188 CGTTTGGGTCATTCGAATATAAATTTG 58.258 33.333 10.97 0.00 0.00 2.32
793 794 7.918562 CCGTTTGGGTCATTCGAATATAAATTT 59.081 33.333 10.97 0.00 0.00 1.82
794 795 7.283580 TCCGTTTGGGTCATTCGAATATAAATT 59.716 33.333 10.97 0.00 37.00 1.82
795 796 6.768861 TCCGTTTGGGTCATTCGAATATAAAT 59.231 34.615 10.97 0.00 37.00 1.40
796 797 6.114089 TCCGTTTGGGTCATTCGAATATAAA 58.886 36.000 10.97 5.52 37.00 1.40
797 798 5.672503 TCCGTTTGGGTCATTCGAATATAA 58.327 37.500 10.97 0.00 37.00 0.98
798 799 5.279255 TCCGTTTGGGTCATTCGAATATA 57.721 39.130 10.97 0.00 37.00 0.86
799 800 4.145365 TCCGTTTGGGTCATTCGAATAT 57.855 40.909 10.97 0.00 37.00 1.28
800 801 3.613494 TCCGTTTGGGTCATTCGAATA 57.387 42.857 10.97 0.00 37.00 1.75
801 802 2.483014 TCCGTTTGGGTCATTCGAAT 57.517 45.000 4.39 4.39 37.00 3.34
802 803 2.483014 ATCCGTTTGGGTCATTCGAA 57.517 45.000 0.00 0.00 37.00 3.71
803 804 3.613494 TTATCCGTTTGGGTCATTCGA 57.387 42.857 0.00 0.00 37.00 3.71
804 805 4.688511 TTTTATCCGTTTGGGTCATTCG 57.311 40.909 0.00 0.00 37.00 3.34
805 806 6.320418 ACCTATTTTATCCGTTTGGGTCATTC 59.680 38.462 0.00 0.00 37.00 2.67
806 807 6.192044 ACCTATTTTATCCGTTTGGGTCATT 58.808 36.000 0.00 0.00 37.00 2.57
807 808 5.762279 ACCTATTTTATCCGTTTGGGTCAT 58.238 37.500 0.00 0.00 37.00 3.06
808 809 5.182169 ACCTATTTTATCCGTTTGGGTCA 57.818 39.130 0.00 0.00 37.00 4.02
809 810 4.271776 CGACCTATTTTATCCGTTTGGGTC 59.728 45.833 0.00 0.00 37.80 4.46
810 811 4.193865 CGACCTATTTTATCCGTTTGGGT 58.806 43.478 0.00 0.00 37.00 4.51
811 812 3.002965 GCGACCTATTTTATCCGTTTGGG 59.997 47.826 0.00 0.00 35.24 4.12
812 813 3.875134 AGCGACCTATTTTATCCGTTTGG 59.125 43.478 0.00 0.00 0.00 3.28
813 814 4.260620 CCAGCGACCTATTTTATCCGTTTG 60.261 45.833 0.00 0.00 0.00 2.93
814 815 3.875134 CCAGCGACCTATTTTATCCGTTT 59.125 43.478 0.00 0.00 0.00 3.60
815 816 3.463944 CCAGCGACCTATTTTATCCGTT 58.536 45.455 0.00 0.00 0.00 4.44
816 817 2.224209 CCCAGCGACCTATTTTATCCGT 60.224 50.000 0.00 0.00 0.00 4.69
817 818 2.224209 ACCCAGCGACCTATTTTATCCG 60.224 50.000 0.00 0.00 0.00 4.18
818 819 3.487120 ACCCAGCGACCTATTTTATCC 57.513 47.619 0.00 0.00 0.00 2.59
819 820 3.564225 CCAACCCAGCGACCTATTTTATC 59.436 47.826 0.00 0.00 0.00 1.75
820 821 3.201266 TCCAACCCAGCGACCTATTTTAT 59.799 43.478 0.00 0.00 0.00 1.40
821 822 2.572556 TCCAACCCAGCGACCTATTTTA 59.427 45.455 0.00 0.00 0.00 1.52
822 823 1.353022 TCCAACCCAGCGACCTATTTT 59.647 47.619 0.00 0.00 0.00 1.82
823 824 0.988832 TCCAACCCAGCGACCTATTT 59.011 50.000 0.00 0.00 0.00 1.40
824 825 0.541863 CTCCAACCCAGCGACCTATT 59.458 55.000 0.00 0.00 0.00 1.73
825 826 0.617820 ACTCCAACCCAGCGACCTAT 60.618 55.000 0.00 0.00 0.00 2.57
826 827 0.834687 AACTCCAACCCAGCGACCTA 60.835 55.000 0.00 0.00 0.00 3.08
827 828 2.147387 AACTCCAACCCAGCGACCT 61.147 57.895 0.00 0.00 0.00 3.85
828 829 1.966451 CAACTCCAACCCAGCGACC 60.966 63.158 0.00 0.00 0.00 4.79
829 830 2.617274 GCAACTCCAACCCAGCGAC 61.617 63.158 0.00 0.00 0.00 5.19
830 831 2.281484 GCAACTCCAACCCAGCGA 60.281 61.111 0.00 0.00 0.00 4.93
831 832 2.281761 AGCAACTCCAACCCAGCG 60.282 61.111 0.00 0.00 0.00 5.18
832 833 0.324943 TAGAGCAACTCCAACCCAGC 59.675 55.000 0.00 0.00 0.00 4.85
833 834 2.859165 TTAGAGCAACTCCAACCCAG 57.141 50.000 0.00 0.00 0.00 4.45
834 835 4.919774 TTATTAGAGCAACTCCAACCCA 57.080 40.909 0.00 0.00 0.00 4.51
835 836 6.377146 TGAATTTATTAGAGCAACTCCAACCC 59.623 38.462 0.00 0.00 0.00 4.11
836 837 7.391148 TGAATTTATTAGAGCAACTCCAACC 57.609 36.000 0.00 0.00 0.00 3.77
837 838 9.129209 GTTTGAATTTATTAGAGCAACTCCAAC 57.871 33.333 0.00 0.00 0.00 3.77
838 839 8.020819 CGTTTGAATTTATTAGAGCAACTCCAA 58.979 33.333 0.00 0.00 0.00 3.53
839 840 7.526608 CGTTTGAATTTATTAGAGCAACTCCA 58.473 34.615 0.00 0.00 0.00 3.86
840 841 6.469275 GCGTTTGAATTTATTAGAGCAACTCC 59.531 38.462 0.00 0.00 0.00 3.85
841 842 7.021196 TGCGTTTGAATTTATTAGAGCAACTC 58.979 34.615 0.00 0.00 0.00 3.01
842 843 6.908825 TGCGTTTGAATTTATTAGAGCAACT 58.091 32.000 0.00 0.00 0.00 3.16
843 844 7.740519 ATGCGTTTGAATTTATTAGAGCAAC 57.259 32.000 0.00 0.00 34.50 4.17
844 845 9.847706 TTTATGCGTTTGAATTTATTAGAGCAA 57.152 25.926 0.00 0.00 34.50 3.91
845 846 9.502145 CTTTATGCGTTTGAATTTATTAGAGCA 57.498 29.630 0.00 0.00 35.32 4.26
846 847 9.503427 ACTTTATGCGTTTGAATTTATTAGAGC 57.497 29.630 0.00 0.00 0.00 4.09
853 854 9.284594 GCATCTTACTTTATGCGTTTGAATTTA 57.715 29.630 0.00 0.00 39.15 1.40
854 855 8.173321 GCATCTTACTTTATGCGTTTGAATTT 57.827 30.769 0.00 0.00 39.15 1.82
855 856 7.740519 GCATCTTACTTTATGCGTTTGAATT 57.259 32.000 0.00 0.00 39.15 2.17
1045 2001 3.483808 TGAGTGTGCACTTGGTGATAA 57.516 42.857 19.41 0.00 42.66 1.75
1284 2240 0.932399 AGCACGTTTCGTTGGTGTAC 59.068 50.000 0.00 0.00 38.32 2.90
1431 2387 2.357034 GCGAGCGTCTTGTTCCCA 60.357 61.111 0.00 0.00 0.00 4.37
1546 2503 2.512692 TAGTTAGTACCCGAGCCACA 57.487 50.000 0.00 0.00 0.00 4.17
2159 3116 2.927856 ACCATGTCCACTCCCGCA 60.928 61.111 0.00 0.00 0.00 5.69
2373 3339 6.431234 AGGTGAAGCTGAACTAAACCAAATAG 59.569 38.462 0.00 0.00 36.75 1.73
2374 3340 6.303839 AGGTGAAGCTGAACTAAACCAAATA 58.696 36.000 0.00 0.00 36.75 1.40
2375 3341 5.140454 AGGTGAAGCTGAACTAAACCAAAT 58.860 37.500 0.00 0.00 36.75 2.32
2448 3420 5.530519 TCGATCTGAAGGAACAAAATTCG 57.469 39.130 0.00 0.00 0.00 3.34
2493 3473 9.282569 AGAAGAAGAAGAAGAAACTACGTACTA 57.717 33.333 0.00 0.00 0.00 1.82
2494 3474 8.077386 CAGAAGAAGAAGAAGAAACTACGTACT 58.923 37.037 0.00 0.00 0.00 2.73
2517 3497 3.650281 TGATAAAATGCTGCCCTCAGA 57.350 42.857 0.00 0.00 42.95 3.27
2518 3498 5.068636 ACTATGATAAAATGCTGCCCTCAG 58.931 41.667 0.00 0.00 43.16 3.35
2519 3499 5.052693 ACTATGATAAAATGCTGCCCTCA 57.947 39.130 0.00 0.00 0.00 3.86
2590 3739 6.189616 CGTGTAAATTGTAAGCACGTAAATCG 59.810 38.462 7.15 0.00 45.07 3.34
2608 3899 2.485426 CGTAGAGGAGACACCGTGTAAA 59.515 50.000 3.58 0.00 44.74 2.01
2640 3942 1.657804 CCTAGTGGGGTGGAAGTCTT 58.342 55.000 0.00 0.00 0.00 3.01
2641 3943 3.401032 CCTAGTGGGGTGGAAGTCT 57.599 57.895 0.00 0.00 0.00 3.24
2677 3979 1.226974 CAGATCAGTGGCGGTACCG 60.227 63.158 30.06 30.06 43.94 4.02
2734 4036 0.032017 ACCAGTAGGAGCCGGAATCT 60.032 55.000 5.05 0.01 38.69 2.40
2765 4067 7.093992 TCAGAAAAACACCTAAAAACCAAGTG 58.906 34.615 0.00 0.00 34.61 3.16
2791 4093 3.283751 TCGACACAAACCCTGAACAAAT 58.716 40.909 0.00 0.00 0.00 2.32
2842 4144 2.731027 GCCGGCGGAAAGAACTTATTTG 60.731 50.000 33.44 0.00 0.00 2.32
2885 4187 0.458260 CGACATGGTCACCGGTGATA 59.542 55.000 38.11 29.14 42.18 2.15
2889 4191 2.646175 CCTCGACATGGTCACCGGT 61.646 63.158 0.00 0.00 32.09 5.28
2919 4221 5.881637 AAAACAAACATCGAACAAATCCG 57.118 34.783 0.00 0.00 0.00 4.18
2931 4233 6.976934 AGTAGATCCACCAAAAACAAACAT 57.023 33.333 0.00 0.00 0.00 2.71
2968 4270 2.354188 CACGAGTGCGGACGAACA 60.354 61.111 5.53 0.00 43.17 3.18
3128 4444 2.469274 ATGAGCAGAAGGTGTGTCAG 57.531 50.000 0.00 0.00 0.00 3.51
3146 4462 5.003804 CACCTAACAAGGAGTACAAGCAAT 58.996 41.667 0.00 0.00 0.00 3.56
3156 4472 3.087031 TCGTAGACCACCTAACAAGGAG 58.913 50.000 0.00 0.00 0.00 3.69
3162 4478 2.821969 TGTTCCTCGTAGACCACCTAAC 59.178 50.000 0.00 0.00 0.00 2.34
3176 4492 4.287766 AGAAACTACACCCATGTTCCTC 57.712 45.455 0.00 0.00 40.48 3.71
3177 4493 4.844655 AGTAGAAACTACACCCATGTTCCT 59.155 41.667 10.78 0.00 40.48 3.36
3178 4494 5.161943 AGTAGAAACTACACCCATGTTCC 57.838 43.478 10.78 0.00 40.48 3.62
3273 4589 3.219981 GTTGTGTAATTGTAACGCCGTG 58.780 45.455 0.00 0.00 0.00 4.94
3275 4591 2.481185 AGGTTGTGTAATTGTAACGCCG 59.519 45.455 0.00 0.00 0.00 6.46
3311 4627 1.661498 GCCCTCCAAGCAAGCTAAGC 61.661 60.000 3.00 3.00 0.00 3.09
3324 4640 0.323360 TAGCAAACCACATGCCCTCC 60.323 55.000 0.00 0.00 44.91 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.