Multiple sequence alignment - TraesCS3B01G261100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G261100 | chr3B | 100.000 | 2420 | 0 | 0 | 1 | 2420 | 419120694 | 419118275 | 0.000000e+00 | 4470.0 |
1 | TraesCS3B01G261100 | chr3B | 98.860 | 351 | 4 | 0 | 1853 | 2203 | 642073228 | 642072878 | 5.680000e-176 | 627.0 |
2 | TraesCS3B01G261100 | chr3D | 93.646 | 1558 | 69 | 8 | 20 | 1559 | 301849557 | 301851102 | 0.000000e+00 | 2302.0 |
3 | TraesCS3B01G261100 | chr3D | 93.043 | 230 | 13 | 2 | 1604 | 1833 | 301851101 | 301851327 | 1.390000e-87 | 333.0 |
4 | TraesCS3B01G261100 | chr3A | 95.475 | 663 | 24 | 3 | 5 | 661 | 433409548 | 433408886 | 0.000000e+00 | 1053.0 |
5 | TraesCS3B01G261100 | chr3A | 88.748 | 631 | 37 | 18 | 647 | 1269 | 433408867 | 433408263 | 0.000000e+00 | 741.0 |
6 | TraesCS3B01G261100 | chr3A | 98.592 | 355 | 4 | 1 | 1854 | 2207 | 445264929 | 445265283 | 5.680000e-176 | 627.0 |
7 | TraesCS3B01G261100 | chr3A | 90.398 | 427 | 23 | 8 | 1433 | 1853 | 433405787 | 433405373 | 1.640000e-151 | 545.0 |
8 | TraesCS3B01G261100 | chr3A | 91.979 | 187 | 15 | 0 | 2234 | 2420 | 433391811 | 433391625 | 1.850000e-66 | 263.0 |
9 | TraesCS3B01G261100 | chr3A | 91.398 | 93 | 8 | 0 | 1336 | 1428 | 433408264 | 433408172 | 7.020000e-26 | 128.0 |
10 | TraesCS3B01G261100 | chr3A | 100.000 | 30 | 0 | 0 | 2390 | 2419 | 690441269 | 690441298 | 3.360000e-04 | 56.5 |
11 | TraesCS3B01G261100 | chr2B | 98.607 | 359 | 4 | 1 | 1852 | 2210 | 410060894 | 410060537 | 3.390000e-178 | 634.0 |
12 | TraesCS3B01G261100 | chr7A | 97.814 | 366 | 8 | 0 | 1852 | 2217 | 647294713 | 647294348 | 1.220000e-177 | 632.0 |
13 | TraesCS3B01G261100 | chr7A | 98.857 | 350 | 4 | 0 | 1854 | 2203 | 374573674 | 374574023 | 2.040000e-175 | 625.0 |
14 | TraesCS3B01G261100 | chr6B | 98.596 | 356 | 5 | 0 | 1852 | 2207 | 646711692 | 646712047 | 4.390000e-177 | 630.0 |
15 | TraesCS3B01G261100 | chrUn | 98.860 | 351 | 4 | 0 | 1853 | 2203 | 229264660 | 229265010 | 5.680000e-176 | 627.0 |
16 | TraesCS3B01G261100 | chr1A | 98.857 | 350 | 4 | 0 | 1854 | 2203 | 449928450 | 449928101 | 2.040000e-175 | 625.0 |
17 | TraesCS3B01G261100 | chr5B | 98.310 | 355 | 5 | 1 | 1853 | 2206 | 536044539 | 536044185 | 2.640000e-174 | 621.0 |
18 | TraesCS3B01G261100 | chr1B | 100.000 | 36 | 0 | 0 | 316 | 351 | 7406676 | 7406641 | 1.550000e-07 | 67.6 |
19 | TraesCS3B01G261100 | chr5D | 100.000 | 30 | 0 | 0 | 2390 | 2419 | 253624558 | 253624529 | 3.360000e-04 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G261100 | chr3B | 419118275 | 419120694 | 2419 | True | 4470.00 | 4470 | 100.00000 | 1 | 2420 | 1 | chr3B.!!$R1 | 2419 |
1 | TraesCS3B01G261100 | chr3D | 301849557 | 301851327 | 1770 | False | 1317.50 | 2302 | 93.34450 | 20 | 1833 | 2 | chr3D.!!$F1 | 1813 |
2 | TraesCS3B01G261100 | chr3A | 433405373 | 433409548 | 4175 | True | 616.75 | 1053 | 91.50475 | 5 | 1853 | 4 | chr3A.!!$R2 | 1848 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
549 | 555 | 0.250901 | GGAAGGCAAGTGCTTCCTCA | 60.251 | 55.0 | 19.06 | 0.0 | 41.17 | 3.86 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2260 | 4715 | 0.031585 | GAATTTAAATCGCCCGCCCC | 59.968 | 55.0 | 0.1 | 0.0 | 0.0 | 5.8 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 5.586243 | GGATTTACAAGCTACTCATTCAGCA | 59.414 | 40.000 | 0.00 | 0.00 | 40.36 | 4.41 |
53 | 54 | 7.757624 | TCAAAACAAAAACACAGGAATCAGTAC | 59.242 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
169 | 170 | 7.136772 | GCTTTTCTGGTTACGAAACTTGTATT | 58.863 | 34.615 | 0.00 | 0.00 | 35.81 | 1.89 |
217 | 218 | 1.468520 | TCAAGCGAGGCATACAAAAGC | 59.531 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
257 | 258 | 2.567169 | ACTGGCTACTGCTAACACATCA | 59.433 | 45.455 | 0.00 | 0.00 | 39.59 | 3.07 |
392 | 393 | 1.118838 | CAGCTAAGCAGAGTAGCCCT | 58.881 | 55.000 | 0.00 | 0.00 | 44.22 | 5.19 |
428 | 429 | 1.162800 | CGGCCATTTCTAGCAGGAGC | 61.163 | 60.000 | 2.24 | 0.00 | 42.56 | 4.70 |
513 | 514 | 4.492160 | CCGAGAAGCTGGCGCGTA | 62.492 | 66.667 | 8.43 | 0.00 | 42.32 | 4.42 |
514 | 515 | 3.248171 | CGAGAAGCTGGCGCGTAC | 61.248 | 66.667 | 8.43 | 1.23 | 42.32 | 3.67 |
549 | 555 | 0.250901 | GGAAGGCAAGTGCTTCCTCA | 60.251 | 55.000 | 19.06 | 0.00 | 41.17 | 3.86 |
600 | 606 | 0.607489 | CTGCCCACTGGAGGACAAAG | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
650 | 656 | 6.071952 | CCCTGCATTACACTGTATTTCAAACT | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
681 | 719 | 6.368213 | GTGAGGAAAAACCACACGTAAATAG | 58.632 | 40.000 | 0.00 | 0.00 | 46.53 | 1.73 |
689 | 727 | 4.382291 | ACCACACGTAAATAGAAGTGCAA | 58.618 | 39.130 | 0.00 | 0.00 | 38.08 | 4.08 |
754 | 797 | 4.214327 | TCACTCACACCGCGCACA | 62.214 | 61.111 | 8.75 | 0.00 | 0.00 | 4.57 |
802 | 845 | 1.006832 | GCGATGGTCGTGCTACAATT | 58.993 | 50.000 | 1.11 | 0.00 | 42.81 | 2.32 |
809 | 852 | 2.307049 | GTCGTGCTACAATTTGTGTGC | 58.693 | 47.619 | 12.30 | 15.13 | 41.89 | 4.57 |
845 | 888 | 5.063880 | TCAGTTAAGCTTTCAACCTCTTCC | 58.936 | 41.667 | 3.20 | 0.00 | 0.00 | 3.46 |
874 | 927 | 7.348201 | CAATAGACTCCATTTCGAAATACTGC | 58.652 | 38.462 | 22.33 | 11.32 | 0.00 | 4.40 |
885 | 938 | 5.801350 | TCGAAATACTGCTCCTGAATTTG | 57.199 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
926 | 979 | 0.892755 | AAACGGTCCGCTGATCTACA | 59.107 | 50.000 | 12.28 | 0.00 | 0.00 | 2.74 |
935 | 988 | 2.894126 | CCGCTGATCTACAAGACCCTAT | 59.106 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
956 | 1009 | 9.452517 | CCCTATCTCCCATATTAATATCCTTCA | 57.547 | 37.037 | 4.93 | 0.00 | 0.00 | 3.02 |
975 | 1028 | 1.991339 | ATAAACCCACCCCGCCTAGC | 61.991 | 60.000 | 0.00 | 0.00 | 0.00 | 3.42 |
978 | 1031 | 4.041762 | CCCACCCCGCCTAGCAAA | 62.042 | 66.667 | 0.00 | 0.00 | 0.00 | 3.68 |
979 | 1032 | 2.438434 | CCACCCCGCCTAGCAAAG | 60.438 | 66.667 | 0.00 | 0.00 | 0.00 | 2.77 |
1184 | 1240 | 1.153745 | CGACGAGGAAGCTCAAGGG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 3.95 |
1191 | 1247 | 3.978571 | GAAGCTCAAGGGGCCGTCC | 62.979 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
1341 | 1397 | 3.181494 | CCATACACTACGACAACGATGGA | 60.181 | 47.826 | 0.00 | 0.00 | 38.09 | 3.41 |
1422 | 1478 | 4.202461 | GGATACATTGGTAGGGCATGAGAA | 60.202 | 45.833 | 0.00 | 0.00 | 31.88 | 2.87 |
1468 | 3904 | 0.820871 | ACCGAAGATCTGCTCAGGAC | 59.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1503 | 3939 | 3.633986 | AGGGCATGATTCTCCGATTTTTC | 59.366 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
1513 | 3950 | 6.892658 | TTCTCCGATTTTTCAATTTCCTCA | 57.107 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
1547 | 3984 | 2.826777 | ATCGCTGAGGCCCCAGTTTG | 62.827 | 60.000 | 16.53 | 6.55 | 36.57 | 2.93 |
1551 | 3988 | 0.961753 | CTGAGGCCCCAGTTTGTTTC | 59.038 | 55.000 | 6.01 | 0.00 | 0.00 | 2.78 |
1599 | 4039 | 3.762247 | CGCCGTTTCCCGTCCCTA | 61.762 | 66.667 | 0.00 | 0.00 | 33.66 | 3.53 |
1746 | 4189 | 5.163992 | ACTCTTGCGTGTAACATTTGATACG | 60.164 | 40.000 | 0.00 | 0.00 | 35.74 | 3.06 |
1785 | 4228 | 4.095483 | CGATTTGGCAGAAGATAAGCAGTT | 59.905 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
1786 | 4229 | 5.573337 | ATTTGGCAGAAGATAAGCAGTTC | 57.427 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
1787 | 4230 | 3.701205 | TGGCAGAAGATAAGCAGTTCA | 57.299 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
1788 | 4231 | 4.019792 | TGGCAGAAGATAAGCAGTTCAA | 57.980 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
1789 | 4232 | 4.397420 | TGGCAGAAGATAAGCAGTTCAAA | 58.603 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
1790 | 4233 | 4.216257 | TGGCAGAAGATAAGCAGTTCAAAC | 59.784 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
1791 | 4234 | 4.457257 | GGCAGAAGATAAGCAGTTCAAACT | 59.543 | 41.667 | 0.00 | 0.00 | 40.60 | 2.66 |
1848 | 4303 | 1.909376 | CAGTGACGATTCCCAGTACG | 58.091 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1853 | 4308 | 0.108329 | ACGATTCCCAGTACGCCAAG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1854 | 4309 | 0.810031 | CGATTCCCAGTACGCCAAGG | 60.810 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1855 | 4310 | 0.463833 | GATTCCCAGTACGCCAAGGG | 60.464 | 60.000 | 0.00 | 0.00 | 42.86 | 3.95 |
1856 | 4311 | 2.552231 | ATTCCCAGTACGCCAAGGGC | 62.552 | 60.000 | 0.00 | 0.00 | 46.75 | 5.19 |
1865 | 4320 | 4.519610 | GCCAAGGGCTTCTTTGGA | 57.480 | 55.556 | 10.77 | 0.00 | 46.69 | 3.53 |
1866 | 4321 | 2.982026 | GCCAAGGGCTTCTTTGGAT | 58.018 | 52.632 | 10.77 | 0.00 | 46.69 | 3.41 |
1867 | 4322 | 0.820226 | GCCAAGGGCTTCTTTGGATC | 59.180 | 55.000 | 10.77 | 0.00 | 46.69 | 3.36 |
1868 | 4323 | 1.892329 | GCCAAGGGCTTCTTTGGATCA | 60.892 | 52.381 | 10.77 | 0.00 | 46.69 | 2.92 |
1869 | 4324 | 1.821136 | CCAAGGGCTTCTTTGGATCAC | 59.179 | 52.381 | 1.65 | 0.00 | 32.41 | 3.06 |
1870 | 4325 | 2.517959 | CAAGGGCTTCTTTGGATCACA | 58.482 | 47.619 | 0.00 | 0.00 | 32.41 | 3.58 |
1871 | 4326 | 2.490903 | CAAGGGCTTCTTTGGATCACAG | 59.509 | 50.000 | 0.00 | 0.00 | 32.41 | 3.66 |
1872 | 4327 | 1.005215 | AGGGCTTCTTTGGATCACAGG | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
1873 | 4328 | 1.004745 | GGGCTTCTTTGGATCACAGGA | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
1874 | 4329 | 2.357569 | GGGCTTCTTTGGATCACAGGAT | 60.358 | 50.000 | 0.00 | 0.00 | 36.13 | 3.24 |
1875 | 4330 | 3.359950 | GGCTTCTTTGGATCACAGGATT | 58.640 | 45.455 | 0.00 | 0.00 | 32.67 | 3.01 |
1876 | 4331 | 4.526970 | GGCTTCTTTGGATCACAGGATTA | 58.473 | 43.478 | 0.00 | 0.00 | 32.67 | 1.75 |
1877 | 4332 | 4.578105 | GGCTTCTTTGGATCACAGGATTAG | 59.422 | 45.833 | 0.00 | 0.00 | 32.67 | 1.73 |
1878 | 4333 | 5.431765 | GCTTCTTTGGATCACAGGATTAGA | 58.568 | 41.667 | 0.00 | 0.00 | 32.67 | 2.10 |
1879 | 4334 | 5.882557 | GCTTCTTTGGATCACAGGATTAGAA | 59.117 | 40.000 | 0.00 | 0.00 | 32.67 | 2.10 |
1880 | 4335 | 6.375455 | GCTTCTTTGGATCACAGGATTAGAAA | 59.625 | 38.462 | 0.00 | 0.00 | 32.67 | 2.52 |
1881 | 4336 | 7.094205 | GCTTCTTTGGATCACAGGATTAGAAAA | 60.094 | 37.037 | 0.00 | 0.00 | 32.67 | 2.29 |
1882 | 4337 | 8.884124 | TTCTTTGGATCACAGGATTAGAAAAT | 57.116 | 30.769 | 0.00 | 0.00 | 32.67 | 1.82 |
1883 | 4338 | 9.973661 | TTCTTTGGATCACAGGATTAGAAAATA | 57.026 | 29.630 | 0.00 | 0.00 | 32.67 | 1.40 |
1884 | 4339 | 9.973661 | TCTTTGGATCACAGGATTAGAAAATAA | 57.026 | 29.630 | 0.00 | 0.00 | 32.67 | 1.40 |
1887 | 4342 | 8.752005 | TGGATCACAGGATTAGAAAATAAAGG | 57.248 | 34.615 | 0.00 | 0.00 | 32.67 | 3.11 |
1888 | 4343 | 8.556589 | TGGATCACAGGATTAGAAAATAAAGGA | 58.443 | 33.333 | 0.00 | 0.00 | 32.67 | 3.36 |
1889 | 4344 | 9.408648 | GGATCACAGGATTAGAAAATAAAGGAA | 57.591 | 33.333 | 0.00 | 0.00 | 32.67 | 3.36 |
1915 | 4370 | 3.726291 | AAAACACAGGAATTTGACGGG | 57.274 | 42.857 | 0.00 | 0.00 | 0.00 | 5.28 |
1916 | 4371 | 2.649531 | AACACAGGAATTTGACGGGA | 57.350 | 45.000 | 0.00 | 0.00 | 0.00 | 5.14 |
1917 | 4372 | 2.879103 | ACACAGGAATTTGACGGGAT | 57.121 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1918 | 4373 | 3.154827 | ACACAGGAATTTGACGGGATT | 57.845 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
1919 | 4374 | 2.819608 | ACACAGGAATTTGACGGGATTG | 59.180 | 45.455 | 0.00 | 0.00 | 0.00 | 2.67 |
1920 | 4375 | 2.819608 | CACAGGAATTTGACGGGATTGT | 59.180 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
1921 | 4376 | 4.006989 | CACAGGAATTTGACGGGATTGTA | 58.993 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
1922 | 4377 | 4.094887 | CACAGGAATTTGACGGGATTGTAG | 59.905 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
1923 | 4378 | 3.627577 | CAGGAATTTGACGGGATTGTAGG | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
1924 | 4379 | 3.265995 | AGGAATTTGACGGGATTGTAGGT | 59.734 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
1925 | 4380 | 3.377172 | GGAATTTGACGGGATTGTAGGTG | 59.623 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
1926 | 4381 | 1.816074 | TTTGACGGGATTGTAGGTGC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1927 | 4382 | 0.687920 | TTGACGGGATTGTAGGTGCA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
1928 | 4383 | 0.687920 | TGACGGGATTGTAGGTGCAA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
1929 | 4384 | 1.072489 | TGACGGGATTGTAGGTGCAAA | 59.928 | 47.619 | 0.00 | 0.00 | 31.63 | 3.68 |
1930 | 4385 | 2.156098 | GACGGGATTGTAGGTGCAAAA | 58.844 | 47.619 | 0.00 | 0.00 | 31.63 | 2.44 |
1931 | 4386 | 1.883926 | ACGGGATTGTAGGTGCAAAAC | 59.116 | 47.619 | 0.00 | 0.00 | 31.63 | 2.43 |
1932 | 4387 | 1.883275 | CGGGATTGTAGGTGCAAAACA | 59.117 | 47.619 | 0.00 | 0.00 | 31.63 | 2.83 |
1933 | 4388 | 2.095263 | CGGGATTGTAGGTGCAAAACAG | 60.095 | 50.000 | 0.00 | 0.00 | 31.63 | 3.16 |
1934 | 4389 | 3.153919 | GGGATTGTAGGTGCAAAACAGA | 58.846 | 45.455 | 0.00 | 0.00 | 31.63 | 3.41 |
1935 | 4390 | 3.191371 | GGGATTGTAGGTGCAAAACAGAG | 59.809 | 47.826 | 0.00 | 0.00 | 31.63 | 3.35 |
1936 | 4391 | 3.191371 | GGATTGTAGGTGCAAAACAGAGG | 59.809 | 47.826 | 0.00 | 0.00 | 31.63 | 3.69 |
1937 | 4392 | 3.569194 | TTGTAGGTGCAAAACAGAGGA | 57.431 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
1938 | 4393 | 3.788227 | TGTAGGTGCAAAACAGAGGAT | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
1939 | 4394 | 4.098914 | TGTAGGTGCAAAACAGAGGATT | 57.901 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1940 | 4395 | 5.235850 | TGTAGGTGCAAAACAGAGGATTA | 57.764 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
1941 | 4396 | 5.001232 | TGTAGGTGCAAAACAGAGGATTAC | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
1942 | 4397 | 4.098914 | AGGTGCAAAACAGAGGATTACA | 57.901 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
1943 | 4398 | 4.469657 | AGGTGCAAAACAGAGGATTACAA | 58.530 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
1944 | 4399 | 4.892934 | AGGTGCAAAACAGAGGATTACAAA | 59.107 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
1945 | 4400 | 5.362430 | AGGTGCAAAACAGAGGATTACAAAA | 59.638 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1946 | 4401 | 6.041979 | AGGTGCAAAACAGAGGATTACAAAAT | 59.958 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
1947 | 4402 | 7.232534 | AGGTGCAAAACAGAGGATTACAAAATA | 59.767 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1948 | 4403 | 7.542130 | GGTGCAAAACAGAGGATTACAAAATAG | 59.458 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
1949 | 4404 | 8.296713 | GTGCAAAACAGAGGATTACAAAATAGA | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
1950 | 4405 | 8.514594 | TGCAAAACAGAGGATTACAAAATAGAG | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
1951 | 4406 | 7.970614 | GCAAAACAGAGGATTACAAAATAGAGG | 59.029 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
1952 | 4407 | 9.231297 | CAAAACAGAGGATTACAAAATAGAGGA | 57.769 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
1953 | 4408 | 9.807921 | AAAACAGAGGATTACAAAATAGAGGAA | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
1954 | 4409 | 9.807921 | AAACAGAGGATTACAAAATAGAGGAAA | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
1955 | 4410 | 9.807921 | AACAGAGGATTACAAAATAGAGGAAAA | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1956 | 4411 | 9.232473 | ACAGAGGATTACAAAATAGAGGAAAAC | 57.768 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
1957 | 4412 | 9.454859 | CAGAGGATTACAAAATAGAGGAAAACT | 57.545 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
1973 | 4428 | 9.981460 | AGAGGAAAACTATAAGAATGGTCATTT | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1975 | 4430 | 8.971073 | AGGAAAACTATAAGAATGGTCATTTGG | 58.029 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
1976 | 4431 | 8.966868 | GGAAAACTATAAGAATGGTCATTTGGA | 58.033 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
1979 | 4434 | 8.469309 | AACTATAAGAATGGTCATTTGGATGG | 57.531 | 34.615 | 0.00 | 0.00 | 33.93 | 3.51 |
1980 | 4435 | 7.815383 | ACTATAAGAATGGTCATTTGGATGGA | 58.185 | 34.615 | 0.00 | 0.00 | 33.93 | 3.41 |
1981 | 4436 | 8.281531 | ACTATAAGAATGGTCATTTGGATGGAA | 58.718 | 33.333 | 0.00 | 0.00 | 33.93 | 3.53 |
1982 | 4437 | 5.665916 | AAGAATGGTCATTTGGATGGAAC | 57.334 | 39.130 | 0.00 | 0.00 | 33.93 | 3.62 |
1998 | 4453 | 2.757868 | TGGAACACAGGAAAAACACAGG | 59.242 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
1999 | 4454 | 3.020984 | GGAACACAGGAAAAACACAGGA | 58.979 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2000 | 4455 | 3.445805 | GGAACACAGGAAAAACACAGGAA | 59.554 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2001 | 4456 | 4.081917 | GGAACACAGGAAAAACACAGGAAA | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
2002 | 4457 | 5.474825 | GAACACAGGAAAAACACAGGAAAA | 58.525 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2003 | 4458 | 5.072040 | ACACAGGAAAAACACAGGAAAAG | 57.928 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
2004 | 4459 | 4.526650 | ACACAGGAAAAACACAGGAAAAGT | 59.473 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
2005 | 4460 | 4.864247 | CACAGGAAAAACACAGGAAAAGTG | 59.136 | 41.667 | 0.00 | 0.00 | 42.56 | 3.16 |
2006 | 4461 | 3.865164 | CAGGAAAAACACAGGAAAAGTGC | 59.135 | 43.478 | 0.00 | 0.00 | 40.59 | 4.40 |
2007 | 4462 | 3.118775 | AGGAAAAACACAGGAAAAGTGCC | 60.119 | 43.478 | 0.00 | 0.00 | 40.59 | 5.01 |
2008 | 4463 | 3.118775 | GGAAAAACACAGGAAAAGTGCCT | 60.119 | 43.478 | 0.00 | 0.00 | 40.59 | 4.75 |
2009 | 4464 | 3.801114 | AAAACACAGGAAAAGTGCCTC | 57.199 | 42.857 | 0.00 | 0.00 | 40.59 | 4.70 |
2010 | 4465 | 1.308998 | AACACAGGAAAAGTGCCTCG | 58.691 | 50.000 | 0.00 | 0.00 | 40.59 | 4.63 |
2011 | 4466 | 0.468226 | ACACAGGAAAAGTGCCTCGA | 59.532 | 50.000 | 0.00 | 0.00 | 40.59 | 4.04 |
2012 | 4467 | 1.072331 | ACACAGGAAAAGTGCCTCGAT | 59.928 | 47.619 | 0.00 | 0.00 | 40.59 | 3.59 |
2013 | 4468 | 2.154462 | CACAGGAAAAGTGCCTCGATT | 58.846 | 47.619 | 0.00 | 0.00 | 32.12 | 3.34 |
2014 | 4469 | 2.160417 | CACAGGAAAAGTGCCTCGATTC | 59.840 | 50.000 | 0.00 | 0.00 | 32.12 | 2.52 |
2015 | 4470 | 2.039084 | ACAGGAAAAGTGCCTCGATTCT | 59.961 | 45.455 | 0.00 | 0.00 | 32.12 | 2.40 |
2016 | 4471 | 3.260884 | ACAGGAAAAGTGCCTCGATTCTA | 59.739 | 43.478 | 0.00 | 0.00 | 32.12 | 2.10 |
2017 | 4472 | 3.619038 | CAGGAAAAGTGCCTCGATTCTAC | 59.381 | 47.826 | 0.00 | 0.00 | 32.12 | 2.59 |
2018 | 4473 | 2.603560 | GGAAAAGTGCCTCGATTCTACG | 59.396 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2019 | 4474 | 1.641577 | AAAGTGCCTCGATTCTACGC | 58.358 | 50.000 | 0.00 | 0.00 | 0.00 | 4.42 |
2020 | 4475 | 0.525668 | AAGTGCCTCGATTCTACGCG | 60.526 | 55.000 | 3.53 | 3.53 | 0.00 | 6.01 |
2021 | 4476 | 1.063649 | GTGCCTCGATTCTACGCGA | 59.936 | 57.895 | 15.93 | 0.00 | 35.01 | 5.87 |
2022 | 4477 | 0.524816 | GTGCCTCGATTCTACGCGAA | 60.525 | 55.000 | 15.93 | 0.00 | 35.95 | 4.70 |
2023 | 4478 | 0.384309 | TGCCTCGATTCTACGCGAAT | 59.616 | 50.000 | 15.93 | 0.98 | 44.87 | 3.34 |
2034 | 4489 | 6.715344 | ATTCTACGCGAATCAGTGTAAAAA | 57.285 | 33.333 | 15.93 | 0.00 | 37.85 | 1.94 |
2061 | 4516 | 7.881775 | AGGTTATAGTGGATGTTGAAATTCC | 57.118 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2062 | 4517 | 7.643123 | AGGTTATAGTGGATGTTGAAATTCCT | 58.357 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
2063 | 4518 | 8.778059 | AGGTTATAGTGGATGTTGAAATTCCTA | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
2064 | 4519 | 9.574516 | GGTTATAGTGGATGTTGAAATTCCTAT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2068 | 4523 | 7.451731 | AGTGGATGTTGAAATTCCTATAGGA | 57.548 | 36.000 | 18.00 | 18.00 | 43.73 | 2.94 |
2069 | 4524 | 8.050316 | AGTGGATGTTGAAATTCCTATAGGAT | 57.950 | 34.615 | 22.30 | 7.73 | 44.98 | 3.24 |
2070 | 4525 | 8.506083 | AGTGGATGTTGAAATTCCTATAGGATT | 58.494 | 33.333 | 22.30 | 15.72 | 44.98 | 3.01 |
2071 | 4526 | 8.571336 | GTGGATGTTGAAATTCCTATAGGATTG | 58.429 | 37.037 | 22.30 | 0.00 | 44.98 | 2.67 |
2072 | 4527 | 8.501904 | TGGATGTTGAAATTCCTATAGGATTGA | 58.498 | 33.333 | 22.30 | 8.22 | 44.98 | 2.57 |
2073 | 4528 | 9.007901 | GGATGTTGAAATTCCTATAGGATTGAG | 57.992 | 37.037 | 22.30 | 0.00 | 44.98 | 3.02 |
2074 | 4529 | 8.930846 | ATGTTGAAATTCCTATAGGATTGAGG | 57.069 | 34.615 | 22.30 | 0.00 | 44.98 | 3.86 |
2075 | 4530 | 7.872138 | TGTTGAAATTCCTATAGGATTGAGGT | 58.128 | 34.615 | 22.30 | 5.13 | 44.98 | 3.85 |
2076 | 4531 | 7.775093 | TGTTGAAATTCCTATAGGATTGAGGTG | 59.225 | 37.037 | 22.30 | 0.00 | 44.98 | 4.00 |
2077 | 4532 | 7.451731 | TGAAATTCCTATAGGATTGAGGTGT | 57.548 | 36.000 | 22.30 | 0.27 | 44.98 | 4.16 |
2078 | 4533 | 8.561536 | TGAAATTCCTATAGGATTGAGGTGTA | 57.438 | 34.615 | 22.30 | 4.41 | 44.98 | 2.90 |
2079 | 4534 | 8.651389 | TGAAATTCCTATAGGATTGAGGTGTAG | 58.349 | 37.037 | 22.30 | 0.00 | 44.98 | 2.74 |
2080 | 4535 | 7.560796 | AATTCCTATAGGATTGAGGTGTAGG | 57.439 | 40.000 | 22.30 | 0.00 | 44.98 | 3.18 |
2081 | 4536 | 5.942977 | TCCTATAGGATTGAGGTGTAGGA | 57.057 | 43.478 | 18.00 | 0.00 | 39.78 | 2.94 |
2082 | 4537 | 6.289482 | TCCTATAGGATTGAGGTGTAGGAA | 57.711 | 41.667 | 18.00 | 0.00 | 39.78 | 3.36 |
2083 | 4538 | 6.875469 | TCCTATAGGATTGAGGTGTAGGAAT | 58.125 | 40.000 | 18.00 | 0.00 | 39.78 | 3.01 |
2084 | 4539 | 6.726299 | TCCTATAGGATTGAGGTGTAGGAATG | 59.274 | 42.308 | 18.00 | 0.00 | 39.78 | 2.67 |
2085 | 4540 | 3.567478 | AGGATTGAGGTGTAGGAATGC | 57.433 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
2086 | 4541 | 2.846206 | AGGATTGAGGTGTAGGAATGCA | 59.154 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
2087 | 4542 | 3.461085 | AGGATTGAGGTGTAGGAATGCAT | 59.539 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
2088 | 4543 | 3.817647 | GGATTGAGGTGTAGGAATGCATC | 59.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
2103 | 4558 | 6.409524 | GAATGCATCCATAGGAATTTTGGA | 57.590 | 37.500 | 0.00 | 0.00 | 43.37 | 3.53 |
2104 | 4559 | 6.415206 | AATGCATCCATAGGAATTTTGGAG | 57.585 | 37.500 | 0.00 | 0.00 | 42.53 | 3.86 |
2105 | 4560 | 4.217510 | TGCATCCATAGGAATTTTGGAGG | 58.782 | 43.478 | 7.53 | 7.53 | 42.53 | 4.30 |
2106 | 4561 | 4.218312 | GCATCCATAGGAATTTTGGAGGT | 58.782 | 43.478 | 11.41 | 0.00 | 42.53 | 3.85 |
2107 | 4562 | 4.038402 | GCATCCATAGGAATTTTGGAGGTG | 59.962 | 45.833 | 11.41 | 5.94 | 42.53 | 4.00 |
2108 | 4563 | 4.946160 | TCCATAGGAATTTTGGAGGTGT | 57.054 | 40.909 | 0.00 | 0.00 | 34.65 | 4.16 |
2109 | 4564 | 4.599041 | TCCATAGGAATTTTGGAGGTGTG | 58.401 | 43.478 | 0.00 | 0.00 | 34.65 | 3.82 |
2110 | 4565 | 3.701040 | CCATAGGAATTTTGGAGGTGTGG | 59.299 | 47.826 | 0.00 | 0.00 | 31.94 | 4.17 |
2111 | 4566 | 4.344104 | CATAGGAATTTTGGAGGTGTGGT | 58.656 | 43.478 | 0.00 | 0.00 | 0.00 | 4.16 |
2112 | 4567 | 3.328535 | AGGAATTTTGGAGGTGTGGTT | 57.671 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
2113 | 4568 | 3.230976 | AGGAATTTTGGAGGTGTGGTTC | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
2114 | 4569 | 2.299013 | GGAATTTTGGAGGTGTGGTTCC | 59.701 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2115 | 4570 | 3.230976 | GAATTTTGGAGGTGTGGTTCCT | 58.769 | 45.455 | 0.00 | 0.00 | 38.09 | 3.36 |
2116 | 4571 | 2.838637 | TTTTGGAGGTGTGGTTCCTT | 57.161 | 45.000 | 0.00 | 0.00 | 35.20 | 3.36 |
2117 | 4572 | 2.838637 | TTTGGAGGTGTGGTTCCTTT | 57.161 | 45.000 | 0.00 | 0.00 | 35.20 | 3.11 |
2118 | 4573 | 2.065899 | TTGGAGGTGTGGTTCCTTTG | 57.934 | 50.000 | 0.00 | 0.00 | 35.20 | 2.77 |
2119 | 4574 | 1.217916 | TGGAGGTGTGGTTCCTTTGA | 58.782 | 50.000 | 0.00 | 0.00 | 35.20 | 2.69 |
2120 | 4575 | 1.780309 | TGGAGGTGTGGTTCCTTTGAT | 59.220 | 47.619 | 0.00 | 0.00 | 35.20 | 2.57 |
2121 | 4576 | 2.224769 | TGGAGGTGTGGTTCCTTTGATC | 60.225 | 50.000 | 0.00 | 0.00 | 35.20 | 2.92 |
2122 | 4577 | 2.437413 | GAGGTGTGGTTCCTTTGATCC | 58.563 | 52.381 | 0.00 | 0.00 | 35.20 | 3.36 |
2123 | 4578 | 1.780309 | AGGTGTGGTTCCTTTGATCCA | 59.220 | 47.619 | 0.00 | 0.00 | 37.90 | 3.41 |
2124 | 4579 | 2.176798 | AGGTGTGGTTCCTTTGATCCAA | 59.823 | 45.455 | 0.00 | 0.00 | 41.03 | 3.53 |
2125 | 4580 | 2.962421 | GGTGTGGTTCCTTTGATCCAAA | 59.038 | 45.455 | 0.00 | 0.00 | 41.03 | 3.28 |
2135 | 4590 | 4.879197 | CTTTGATCCAAAGGGCTTCTTT | 57.121 | 40.909 | 10.65 | 0.86 | 44.75 | 2.52 |
2136 | 4591 | 5.982890 | CTTTGATCCAAAGGGCTTCTTTA | 57.017 | 39.130 | 10.65 | 0.00 | 44.75 | 1.85 |
2137 | 4592 | 5.958955 | CTTTGATCCAAAGGGCTTCTTTAG | 58.041 | 41.667 | 10.65 | 0.36 | 44.75 | 1.85 |
2138 | 4593 | 3.968265 | TGATCCAAAGGGCTTCTTTAGG | 58.032 | 45.455 | 5.53 | 8.99 | 43.32 | 2.69 |
2139 | 4594 | 3.591527 | TGATCCAAAGGGCTTCTTTAGGA | 59.408 | 43.478 | 17.03 | 17.03 | 43.32 | 2.94 |
2140 | 4595 | 4.044065 | TGATCCAAAGGGCTTCTTTAGGAA | 59.956 | 41.667 | 17.82 | 8.46 | 43.32 | 3.36 |
2141 | 4596 | 4.463050 | TCCAAAGGGCTTCTTTAGGAAA | 57.537 | 40.909 | 14.71 | 0.00 | 43.32 | 3.13 |
2142 | 4597 | 4.810345 | TCCAAAGGGCTTCTTTAGGAAAA | 58.190 | 39.130 | 14.71 | 0.00 | 43.32 | 2.29 |
2143 | 4598 | 5.212745 | TCCAAAGGGCTTCTTTAGGAAAAA | 58.787 | 37.500 | 14.71 | 0.00 | 43.32 | 1.94 |
2181 | 4636 | 8.940397 | GGAATCCTCCAATATTCCTATGAAAA | 57.060 | 34.615 | 6.80 | 0.00 | 45.16 | 2.29 |
2182 | 4637 | 9.539194 | GGAATCCTCCAATATTCCTATGAAAAT | 57.461 | 33.333 | 6.80 | 0.00 | 45.16 | 1.82 |
2184 | 4639 | 9.539194 | AATCCTCCAATATTCCTATGAAAATCC | 57.461 | 33.333 | 0.00 | 0.00 | 33.32 | 3.01 |
2185 | 4640 | 8.293027 | TCCTCCAATATTCCTATGAAAATCCT | 57.707 | 34.615 | 0.00 | 0.00 | 33.32 | 3.24 |
2186 | 4641 | 8.736675 | TCCTCCAATATTCCTATGAAAATCCTT | 58.263 | 33.333 | 0.00 | 0.00 | 33.32 | 3.36 |
2187 | 4642 | 9.018582 | CCTCCAATATTCCTATGAAAATCCTTC | 57.981 | 37.037 | 0.00 | 0.00 | 33.32 | 3.46 |
2188 | 4643 | 9.578576 | CTCCAATATTCCTATGAAAATCCTTCA | 57.421 | 33.333 | 0.00 | 0.00 | 33.32 | 3.02 |
2189 | 4644 | 9.934784 | TCCAATATTCCTATGAAAATCCTTCAA | 57.065 | 29.630 | 0.00 | 0.00 | 33.32 | 2.69 |
2194 | 4649 | 8.843308 | ATTCCTATGAAAATCCTTCAATCCAA | 57.157 | 30.769 | 0.00 | 0.00 | 33.32 | 3.53 |
2195 | 4650 | 8.663209 | TTCCTATGAAAATCCTTCAATCCAAA | 57.337 | 30.769 | 0.00 | 0.00 | 31.55 | 3.28 |
2196 | 4651 | 8.297470 | TCCTATGAAAATCCTTCAATCCAAAG | 57.703 | 34.615 | 0.00 | 0.00 | 31.55 | 2.77 |
2197 | 4652 | 8.115384 | TCCTATGAAAATCCTTCAATCCAAAGA | 58.885 | 33.333 | 0.00 | 0.00 | 31.55 | 2.52 |
2198 | 4653 | 8.411683 | CCTATGAAAATCCTTCAATCCAAAGAG | 58.588 | 37.037 | 0.00 | 0.00 | 31.55 | 2.85 |
2199 | 4654 | 6.594788 | TGAAAATCCTTCAATCCAAAGAGG | 57.405 | 37.500 | 0.00 | 0.00 | 39.47 | 3.69 |
2200 | 4655 | 5.047092 | TGAAAATCCTTCAATCCAAAGAGGC | 60.047 | 40.000 | 0.00 | 0.00 | 37.29 | 4.70 |
2201 | 4656 | 2.514458 | TCCTTCAATCCAAAGAGGCC | 57.486 | 50.000 | 0.00 | 0.00 | 37.29 | 5.19 |
2202 | 4657 | 1.005924 | TCCTTCAATCCAAAGAGGCCC | 59.994 | 52.381 | 0.00 | 0.00 | 37.29 | 5.80 |
2203 | 4658 | 1.478631 | CTTCAATCCAAAGAGGCCCC | 58.521 | 55.000 | 0.00 | 0.00 | 37.29 | 5.80 |
2204 | 4659 | 0.783206 | TTCAATCCAAAGAGGCCCCA | 59.217 | 50.000 | 0.00 | 0.00 | 37.29 | 4.96 |
2205 | 4660 | 0.783206 | TCAATCCAAAGAGGCCCCAA | 59.217 | 50.000 | 0.00 | 0.00 | 37.29 | 4.12 |
2206 | 4661 | 1.148867 | TCAATCCAAAGAGGCCCCAAA | 59.851 | 47.619 | 0.00 | 0.00 | 37.29 | 3.28 |
2207 | 4662 | 1.276138 | CAATCCAAAGAGGCCCCAAAC | 59.724 | 52.381 | 0.00 | 0.00 | 37.29 | 2.93 |
2208 | 4663 | 0.252239 | ATCCAAAGAGGCCCCAAACC | 60.252 | 55.000 | 0.00 | 0.00 | 37.29 | 3.27 |
2209 | 4664 | 1.156095 | CCAAAGAGGCCCCAAACCT | 59.844 | 57.895 | 0.00 | 0.00 | 41.41 | 3.50 |
2210 | 4665 | 1.187567 | CCAAAGAGGCCCCAAACCTG | 61.188 | 60.000 | 0.00 | 0.00 | 37.77 | 4.00 |
2211 | 4666 | 1.156095 | AAAGAGGCCCCAAACCTGG | 59.844 | 57.895 | 0.00 | 0.00 | 43.10 | 4.45 |
2212 | 4667 | 1.368268 | AAAGAGGCCCCAAACCTGGA | 61.368 | 55.000 | 0.00 | 0.00 | 46.92 | 3.86 |
2213 | 4668 | 1.793820 | AAGAGGCCCCAAACCTGGAG | 61.794 | 60.000 | 0.00 | 0.00 | 46.92 | 3.86 |
2214 | 4669 | 3.946126 | GAGGCCCCAAACCTGGAGC | 62.946 | 68.421 | 0.00 | 0.00 | 46.92 | 4.70 |
2215 | 4670 | 3.984732 | GGCCCCAAACCTGGAGCT | 61.985 | 66.667 | 0.00 | 0.00 | 45.59 | 4.09 |
2216 | 4671 | 2.677875 | GCCCCAAACCTGGAGCTG | 60.678 | 66.667 | 0.00 | 0.00 | 46.92 | 4.24 |
2217 | 4672 | 3.170362 | CCCCAAACCTGGAGCTGA | 58.830 | 61.111 | 0.00 | 0.00 | 46.92 | 4.26 |
2218 | 4673 | 1.460255 | CCCCAAACCTGGAGCTGAA | 59.540 | 57.895 | 0.00 | 0.00 | 46.92 | 3.02 |
2219 | 4674 | 0.895559 | CCCCAAACCTGGAGCTGAAC | 60.896 | 60.000 | 0.00 | 0.00 | 46.92 | 3.18 |
2220 | 4675 | 0.111253 | CCCAAACCTGGAGCTGAACT | 59.889 | 55.000 | 0.00 | 0.00 | 46.92 | 3.01 |
2221 | 4676 | 1.242076 | CCAAACCTGGAGCTGAACTG | 58.758 | 55.000 | 0.00 | 0.00 | 46.92 | 3.16 |
2222 | 4677 | 1.202806 | CCAAACCTGGAGCTGAACTGA | 60.203 | 52.381 | 0.00 | 0.00 | 46.92 | 3.41 |
2223 | 4678 | 2.149578 | CAAACCTGGAGCTGAACTGAG | 58.850 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
2224 | 4679 | 0.036022 | AACCTGGAGCTGAACTGAGC | 59.964 | 55.000 | 0.00 | 0.00 | 39.46 | 4.26 |
2225 | 4680 | 1.078567 | CCTGGAGCTGAACTGAGCC | 60.079 | 63.158 | 0.00 | 0.00 | 40.08 | 4.70 |
2226 | 4681 | 1.675801 | CTGGAGCTGAACTGAGCCA | 59.324 | 57.895 | 0.00 | 0.00 | 40.08 | 4.75 |
2227 | 4682 | 0.252479 | CTGGAGCTGAACTGAGCCAT | 59.748 | 55.000 | 0.00 | 0.00 | 40.08 | 4.40 |
2228 | 4683 | 0.251354 | TGGAGCTGAACTGAGCCATC | 59.749 | 55.000 | 0.00 | 0.00 | 40.08 | 3.51 |
2229 | 4684 | 0.540923 | GGAGCTGAACTGAGCCATCT | 59.459 | 55.000 | 0.00 | 0.00 | 40.08 | 2.90 |
2230 | 4685 | 1.759445 | GGAGCTGAACTGAGCCATCTA | 59.241 | 52.381 | 0.00 | 0.00 | 40.08 | 1.98 |
2231 | 4686 | 2.224018 | GGAGCTGAACTGAGCCATCTAG | 60.224 | 54.545 | 0.00 | 0.00 | 40.08 | 2.43 |
2232 | 4687 | 1.138661 | AGCTGAACTGAGCCATCTAGC | 59.861 | 52.381 | 0.00 | 0.00 | 40.08 | 3.42 |
2234 | 4689 | 2.363680 | GCTGAACTGAGCCATCTAGCTA | 59.636 | 50.000 | 0.00 | 0.00 | 45.15 | 3.32 |
2235 | 4690 | 3.181471 | GCTGAACTGAGCCATCTAGCTAA | 60.181 | 47.826 | 0.00 | 0.00 | 45.15 | 3.09 |
2236 | 4691 | 4.367450 | CTGAACTGAGCCATCTAGCTAAC | 58.633 | 47.826 | 0.00 | 0.00 | 45.15 | 2.34 |
2237 | 4692 | 3.181486 | TGAACTGAGCCATCTAGCTAACG | 60.181 | 47.826 | 0.00 | 0.00 | 45.15 | 3.18 |
2238 | 4693 | 1.683917 | ACTGAGCCATCTAGCTAACGG | 59.316 | 52.381 | 0.00 | 0.00 | 45.15 | 4.44 |
2239 | 4694 | 1.683917 | CTGAGCCATCTAGCTAACGGT | 59.316 | 52.381 | 0.00 | 0.00 | 45.15 | 4.83 |
2240 | 4695 | 2.885266 | CTGAGCCATCTAGCTAACGGTA | 59.115 | 50.000 | 0.00 | 0.00 | 45.15 | 4.02 |
2241 | 4696 | 2.621998 | TGAGCCATCTAGCTAACGGTAC | 59.378 | 50.000 | 0.00 | 0.00 | 45.15 | 3.34 |
2256 | 4711 | 1.023502 | GGTACGTACTGAGAGAGGGC | 58.976 | 60.000 | 24.07 | 0.85 | 0.00 | 5.19 |
2257 | 4712 | 0.656785 | GTACGTACTGAGAGAGGGCG | 59.343 | 60.000 | 18.47 | 0.00 | 0.00 | 6.13 |
2258 | 4713 | 0.538584 | TACGTACTGAGAGAGGGCGA | 59.461 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2259 | 4714 | 1.025647 | ACGTACTGAGAGAGGGCGAC | 61.026 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2260 | 4715 | 1.722677 | GTACTGAGAGAGGGCGACG | 59.277 | 63.158 | 0.00 | 0.00 | 0.00 | 5.12 |
2261 | 4716 | 1.451567 | TACTGAGAGAGGGCGACGG | 60.452 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2262 | 4717 | 2.888464 | TACTGAGAGAGGGCGACGGG | 62.888 | 65.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2274 | 4729 | 4.534141 | GACGGGGCGGGCGATTTA | 62.534 | 66.667 | 0.00 | 0.00 | 0.00 | 1.40 |
2275 | 4730 | 4.098722 | ACGGGGCGGGCGATTTAA | 62.099 | 61.111 | 0.00 | 0.00 | 0.00 | 1.52 |
2276 | 4731 | 2.824937 | CGGGGCGGGCGATTTAAA | 60.825 | 61.111 | 0.00 | 0.00 | 0.00 | 1.52 |
2277 | 4732 | 2.190841 | CGGGGCGGGCGATTTAAAT | 61.191 | 57.895 | 0.00 | 0.00 | 0.00 | 1.40 |
2278 | 4733 | 1.730451 | CGGGGCGGGCGATTTAAATT | 61.730 | 55.000 | 1.43 | 0.00 | 0.00 | 1.82 |
2279 | 4734 | 0.031585 | GGGGCGGGCGATTTAAATTC | 59.968 | 55.000 | 1.43 | 0.00 | 0.00 | 2.17 |
2280 | 4735 | 0.317519 | GGGCGGGCGATTTAAATTCG | 60.318 | 55.000 | 1.43 | 8.56 | 0.00 | 3.34 |
2287 | 4742 | 1.786579 | GCGATTTAAATTCGCCATGGC | 59.213 | 47.619 | 27.67 | 27.67 | 45.77 | 4.40 |
2288 | 4743 | 2.543653 | GCGATTTAAATTCGCCATGGCT | 60.544 | 45.455 | 33.07 | 17.48 | 45.77 | 4.75 |
2289 | 4744 | 3.300009 | CGATTTAAATTCGCCATGGCTC | 58.700 | 45.455 | 33.07 | 19.17 | 39.32 | 4.70 |
2290 | 4745 | 3.642705 | GATTTAAATTCGCCATGGCTCC | 58.357 | 45.455 | 33.07 | 6.46 | 39.32 | 4.70 |
2291 | 4746 | 1.021202 | TTAAATTCGCCATGGCTCCG | 58.979 | 50.000 | 33.07 | 18.78 | 39.32 | 4.63 |
2292 | 4747 | 0.817634 | TAAATTCGCCATGGCTCCGG | 60.818 | 55.000 | 33.07 | 18.40 | 39.32 | 5.14 |
2331 | 4786 | 4.742201 | CCGCTGTGTCGGTCAGGG | 62.742 | 72.222 | 10.56 | 10.56 | 44.18 | 4.45 |
2332 | 4787 | 3.991051 | CGCTGTGTCGGTCAGGGT | 61.991 | 66.667 | 9.76 | 0.00 | 39.76 | 4.34 |
2333 | 4788 | 2.357517 | GCTGTGTCGGTCAGGGTG | 60.358 | 66.667 | 0.00 | 0.00 | 33.98 | 4.61 |
2334 | 4789 | 2.343758 | CTGTGTCGGTCAGGGTGG | 59.656 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
2335 | 4790 | 2.123208 | TGTGTCGGTCAGGGTGGA | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2336 | 4791 | 1.754380 | CTGTGTCGGTCAGGGTGGAA | 61.754 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2337 | 4792 | 1.338890 | TGTGTCGGTCAGGGTGGAAA | 61.339 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
2338 | 4793 | 0.883370 | GTGTCGGTCAGGGTGGAAAC | 60.883 | 60.000 | 0.00 | 0.00 | 0.00 | 2.78 |
2339 | 4794 | 1.666872 | GTCGGTCAGGGTGGAAACG | 60.667 | 63.158 | 0.00 | 0.00 | 0.00 | 3.60 |
2340 | 4795 | 3.047877 | CGGTCAGGGTGGAAACGC | 61.048 | 66.667 | 0.00 | 0.00 | 41.20 | 4.84 |
2341 | 4796 | 3.047877 | GGTCAGGGTGGAAACGCG | 61.048 | 66.667 | 3.53 | 3.53 | 43.50 | 6.01 |
2342 | 4797 | 2.280592 | GTCAGGGTGGAAACGCGT | 60.281 | 61.111 | 5.58 | 5.58 | 43.50 | 6.01 |
2343 | 4798 | 2.280524 | TCAGGGTGGAAACGCGTG | 60.281 | 61.111 | 14.98 | 0.00 | 43.50 | 5.34 |
2344 | 4799 | 3.353836 | CAGGGTGGAAACGCGTGG | 61.354 | 66.667 | 14.98 | 0.00 | 43.50 | 4.94 |
2345 | 4800 | 4.636435 | AGGGTGGAAACGCGTGGG | 62.636 | 66.667 | 14.98 | 0.00 | 43.50 | 4.61 |
2384 | 4839 | 4.760047 | CGACCAACCTGGGCCTCG | 62.760 | 72.222 | 4.53 | 0.00 | 44.91 | 4.63 |
2396 | 4851 | 3.058160 | GCCTCGCCAACATGCAGT | 61.058 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
2397 | 4852 | 2.629656 | GCCTCGCCAACATGCAGTT | 61.630 | 57.895 | 0.00 | 0.00 | 42.42 | 3.16 |
2406 | 4861 | 1.808411 | AACATGCAGTTGTAGTCGGG | 58.192 | 50.000 | 0.00 | 0.00 | 39.49 | 5.14 |
2407 | 4862 | 0.685097 | ACATGCAGTTGTAGTCGGGT | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2408 | 4863 | 1.071699 | ACATGCAGTTGTAGTCGGGTT | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 4.11 |
2409 | 4864 | 2.300723 | ACATGCAGTTGTAGTCGGGTTA | 59.699 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
2410 | 4865 | 2.443887 | TGCAGTTGTAGTCGGGTTAC | 57.556 | 50.000 | 0.00 | 0.00 | 0.00 | 2.50 |
2411 | 4866 | 1.687660 | TGCAGTTGTAGTCGGGTTACA | 59.312 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
2412 | 4867 | 2.102757 | TGCAGTTGTAGTCGGGTTACAA | 59.897 | 45.455 | 0.00 | 4.08 | 38.36 | 2.41 |
2415 | 4870 | 1.456923 | GTTGTAGTCGGGTTACAACGC | 59.543 | 52.381 | 16.26 | 0.00 | 46.10 | 4.84 |
2416 | 4871 | 0.961019 | TGTAGTCGGGTTACAACGCT | 59.039 | 50.000 | 7.45 | 0.00 | 39.45 | 5.07 |
2417 | 4872 | 1.340889 | TGTAGTCGGGTTACAACGCTT | 59.659 | 47.619 | 7.45 | 0.00 | 39.45 | 4.68 |
2418 | 4873 | 1.723003 | GTAGTCGGGTTACAACGCTTG | 59.277 | 52.381 | 7.45 | 0.00 | 39.45 | 4.01 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 5.586243 | TGCTGAATGAGTAGCTTGTAAATCC | 59.414 | 40.000 | 0.00 | 0.00 | 40.52 | 3.01 |
1 | 2 | 6.668541 | TGCTGAATGAGTAGCTTGTAAATC | 57.331 | 37.500 | 0.00 | 0.00 | 40.52 | 2.17 |
3 | 4 | 7.174772 | TGAAATGCTGAATGAGTAGCTTGTAAA | 59.825 | 33.333 | 0.00 | 0.00 | 40.52 | 2.01 |
4 | 5 | 6.654582 | TGAAATGCTGAATGAGTAGCTTGTAA | 59.345 | 34.615 | 0.00 | 0.00 | 40.52 | 2.41 |
5 | 6 | 6.172630 | TGAAATGCTGAATGAGTAGCTTGTA | 58.827 | 36.000 | 0.00 | 0.00 | 40.52 | 2.41 |
6 | 7 | 5.005740 | TGAAATGCTGAATGAGTAGCTTGT | 58.994 | 37.500 | 0.00 | 0.00 | 40.52 | 3.16 |
7 | 8 | 5.556355 | TGAAATGCTGAATGAGTAGCTTG | 57.444 | 39.130 | 0.00 | 0.00 | 40.52 | 4.01 |
8 | 9 | 6.579666 | TTTGAAATGCTGAATGAGTAGCTT | 57.420 | 33.333 | 0.00 | 0.00 | 40.52 | 3.74 |
24 | 25 | 8.558973 | TGATTCCTGTGTTTTTGTTTTGAAAT | 57.441 | 26.923 | 0.00 | 0.00 | 0.00 | 2.17 |
53 | 54 | 5.423886 | GAGGGAACATCCTAGAAGTTTCTG | 58.576 | 45.833 | 4.67 | 0.00 | 37.25 | 3.02 |
101 | 102 | 2.833338 | AGATCAGGGATATGAGCAGAGC | 59.167 | 50.000 | 0.00 | 0.00 | 38.07 | 4.09 |
169 | 170 | 5.163794 | GCTGCCGCTTACAGTAATTTTAGAA | 60.164 | 40.000 | 0.00 | 0.00 | 37.47 | 2.10 |
257 | 258 | 2.493278 | CGGGGCAAGTTCTGAATGATTT | 59.507 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
428 | 429 | 0.179089 | CTCTCAGATCCACGGCCTTG | 60.179 | 60.000 | 1.29 | 1.29 | 0.00 | 3.61 |
513 | 514 | 2.741092 | CACGGCACTACCACCAGT | 59.259 | 61.111 | 0.00 | 0.00 | 39.03 | 4.00 |
514 | 515 | 2.047274 | CCACGGCACTACCACCAG | 60.047 | 66.667 | 0.00 | 0.00 | 39.03 | 4.00 |
549 | 555 | 3.389329 | TGAGAAGAGTCAAGAAAGCCACT | 59.611 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
681 | 719 | 1.301716 | TGGCCGTCTCTTGCACTTC | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
787 | 830 | 2.289274 | CACACAAATTGTAGCACGACCA | 59.711 | 45.455 | 0.00 | 0.00 | 35.67 | 4.02 |
809 | 852 | 3.267483 | CTTAACTGAATACCGTGGTGGG | 58.733 | 50.000 | 0.72 | 0.00 | 44.64 | 4.61 |
819 | 862 | 7.390718 | GGAAGAGGTTGAAAGCTTAACTGAATA | 59.609 | 37.037 | 11.01 | 0.00 | 36.78 | 1.75 |
845 | 888 | 1.071239 | CGAAATGGAGTCTATTGCGCG | 60.071 | 52.381 | 15.73 | 0.00 | 30.61 | 6.86 |
885 | 938 | 1.482593 | ACACCTCGGGATCAGATGAAC | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
926 | 979 | 9.453830 | GGATATTAATATGGGAGATAGGGTCTT | 57.546 | 37.037 | 12.74 | 0.00 | 37.29 | 3.01 |
956 | 1009 | 1.991339 | GCTAGGCGGGGTGGGTTTAT | 61.991 | 60.000 | 0.00 | 0.00 | 0.00 | 1.40 |
975 | 1028 | 3.189080 | TGTGATGACGATCCTTTGCTTTG | 59.811 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
977 | 1030 | 2.744202 | GTGTGATGACGATCCTTTGCTT | 59.256 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
978 | 1031 | 2.350522 | GTGTGATGACGATCCTTTGCT | 58.649 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
979 | 1032 | 1.398390 | GGTGTGATGACGATCCTTTGC | 59.602 | 52.381 | 0.00 | 0.00 | 0.00 | 3.68 |
1060 | 1116 | 1.550976 | GGACGTGATCCTCTTGTTCCT | 59.449 | 52.381 | 0.00 | 0.00 | 45.22 | 3.36 |
1133 | 1189 | 3.553095 | AAAGGGCTGAGGGTGTCGC | 62.553 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
1134 | 1190 | 1.376037 | GAAAGGGCTGAGGGTGTCG | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
1135 | 1191 | 1.376037 | CGAAAGGGCTGAGGGTGTC | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
1184 | 1240 | 0.171231 | GAATCTTTTGCTGGACGGCC | 59.829 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1191 | 1247 | 0.522076 | GCTCCGCGAATCTTTTGCTG | 60.522 | 55.000 | 8.23 | 0.00 | 37.93 | 4.41 |
1392 | 1448 | 3.994392 | CCCTACCAATGTATCCGAATTCG | 59.006 | 47.826 | 20.92 | 20.92 | 39.44 | 3.34 |
1422 | 1478 | 2.338381 | CTTGAGTTGCTGCAAGGCT | 58.662 | 52.632 | 16.53 | 10.34 | 38.22 | 4.58 |
1430 | 3866 | 1.940613 | GTTGTTCGTCCTTGAGTTGCT | 59.059 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
1431 | 3867 | 1.002792 | GGTTGTTCGTCCTTGAGTTGC | 60.003 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
1468 | 3904 | 3.667360 | TCATGCCCTATCAATGTCGATG | 58.333 | 45.455 | 0.00 | 0.00 | 0.00 | 3.84 |
1503 | 3939 | 3.878103 | CTGAGAGCAGGATGAGGAAATTG | 59.122 | 47.826 | 0.00 | 0.00 | 39.69 | 2.32 |
1513 | 3950 | 2.492881 | CAGCGATATCTGAGAGCAGGAT | 59.507 | 50.000 | 0.34 | 0.00 | 42.53 | 3.24 |
1686 | 4129 | 6.919662 | CGCATTGGAGTAAAATAAATGCTCAT | 59.080 | 34.615 | 14.55 | 0.00 | 46.88 | 2.90 |
1696 | 4139 | 6.349300 | AGAGTACATCGCATTGGAGTAAAAT | 58.651 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1785 | 4228 | 3.071892 | ACTGGGGACGATAAACAGTTTGA | 59.928 | 43.478 | 8.93 | 0.00 | 39.16 | 2.69 |
1786 | 4229 | 3.188460 | CACTGGGGACGATAAACAGTTTG | 59.812 | 47.826 | 8.93 | 0.00 | 40.14 | 2.93 |
1787 | 4230 | 3.181448 | ACACTGGGGACGATAAACAGTTT | 60.181 | 43.478 | 3.49 | 3.49 | 40.14 | 2.66 |
1788 | 4231 | 2.370849 | ACACTGGGGACGATAAACAGTT | 59.629 | 45.455 | 0.00 | 0.00 | 40.14 | 3.16 |
1789 | 4232 | 1.975680 | ACACTGGGGACGATAAACAGT | 59.024 | 47.619 | 0.00 | 0.00 | 42.62 | 3.55 |
1790 | 4233 | 2.289444 | ACACACTGGGGACGATAAACAG | 60.289 | 50.000 | 0.00 | 0.00 | 35.40 | 3.16 |
1791 | 4234 | 1.695242 | ACACACTGGGGACGATAAACA | 59.305 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
1792 | 4235 | 2.073816 | CACACACTGGGGACGATAAAC | 58.926 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
1793 | 4236 | 1.695242 | ACACACACTGGGGACGATAAA | 59.305 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
1794 | 4237 | 1.344065 | ACACACACTGGGGACGATAA | 58.656 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
1795 | 4238 | 1.001520 | CAACACACACTGGGGACGATA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
1796 | 4239 | 0.250295 | CAACACACACTGGGGACGAT | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.73 |
1853 | 4308 | 1.004745 | TCCTGTGATCCAAAGAAGCCC | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
1854 | 4309 | 2.496899 | TCCTGTGATCCAAAGAAGCC | 57.503 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1855 | 4310 | 5.431765 | TCTAATCCTGTGATCCAAAGAAGC | 58.568 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1856 | 4311 | 7.928307 | TTTCTAATCCTGTGATCCAAAGAAG | 57.072 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1857 | 4312 | 8.884124 | ATTTTCTAATCCTGTGATCCAAAGAA | 57.116 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1858 | 4313 | 9.973661 | TTATTTTCTAATCCTGTGATCCAAAGA | 57.026 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1861 | 4316 | 9.189156 | CCTTTATTTTCTAATCCTGTGATCCAA | 57.811 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
1862 | 4317 | 8.556589 | TCCTTTATTTTCTAATCCTGTGATCCA | 58.443 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1863 | 4318 | 8.980481 | TCCTTTATTTTCTAATCCTGTGATCC | 57.020 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
1894 | 4349 | 3.702045 | TCCCGTCAAATTCCTGTGTTTTT | 59.298 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
1895 | 4350 | 3.292460 | TCCCGTCAAATTCCTGTGTTTT | 58.708 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
1896 | 4351 | 2.938838 | TCCCGTCAAATTCCTGTGTTT | 58.061 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
1897 | 4352 | 2.649531 | TCCCGTCAAATTCCTGTGTT | 57.350 | 45.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1898 | 4353 | 2.819608 | CAATCCCGTCAAATTCCTGTGT | 59.180 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
1899 | 4354 | 2.819608 | ACAATCCCGTCAAATTCCTGTG | 59.180 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
1900 | 4355 | 3.154827 | ACAATCCCGTCAAATTCCTGT | 57.845 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
1901 | 4356 | 3.627577 | CCTACAATCCCGTCAAATTCCTG | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
1902 | 4357 | 3.265995 | ACCTACAATCCCGTCAAATTCCT | 59.734 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
1903 | 4358 | 3.377172 | CACCTACAATCCCGTCAAATTCC | 59.623 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1904 | 4359 | 3.181500 | GCACCTACAATCCCGTCAAATTC | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
1905 | 4360 | 2.752903 | GCACCTACAATCCCGTCAAATT | 59.247 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
1906 | 4361 | 2.290641 | TGCACCTACAATCCCGTCAAAT | 60.291 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
1907 | 4362 | 1.072489 | TGCACCTACAATCCCGTCAAA | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
1908 | 4363 | 0.687920 | TGCACCTACAATCCCGTCAA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1909 | 4364 | 0.687920 | TTGCACCTACAATCCCGTCA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
1910 | 4365 | 1.816074 | TTTGCACCTACAATCCCGTC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1911 | 4366 | 1.883926 | GTTTTGCACCTACAATCCCGT | 59.116 | 47.619 | 0.00 | 0.00 | 0.00 | 5.28 |
1912 | 4367 | 1.883275 | TGTTTTGCACCTACAATCCCG | 59.117 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
1913 | 4368 | 3.153919 | TCTGTTTTGCACCTACAATCCC | 58.846 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
1914 | 4369 | 3.191371 | CCTCTGTTTTGCACCTACAATCC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1915 | 4370 | 4.072131 | TCCTCTGTTTTGCACCTACAATC | 58.928 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
1916 | 4371 | 4.098914 | TCCTCTGTTTTGCACCTACAAT | 57.901 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
1917 | 4372 | 3.569194 | TCCTCTGTTTTGCACCTACAA | 57.431 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
1918 | 4373 | 3.788227 | ATCCTCTGTTTTGCACCTACA | 57.212 | 42.857 | 0.00 | 0.00 | 0.00 | 2.74 |
1919 | 4374 | 5.001232 | TGTAATCCTCTGTTTTGCACCTAC | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
1920 | 4375 | 5.235850 | TGTAATCCTCTGTTTTGCACCTA | 57.764 | 39.130 | 0.00 | 0.00 | 0.00 | 3.08 |
1921 | 4376 | 4.098914 | TGTAATCCTCTGTTTTGCACCT | 57.901 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
1922 | 4377 | 4.846779 | TTGTAATCCTCTGTTTTGCACC | 57.153 | 40.909 | 0.00 | 0.00 | 0.00 | 5.01 |
1923 | 4378 | 8.296713 | TCTATTTTGTAATCCTCTGTTTTGCAC | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
1924 | 4379 | 8.402798 | TCTATTTTGTAATCCTCTGTTTTGCA | 57.597 | 30.769 | 0.00 | 0.00 | 0.00 | 4.08 |
1925 | 4380 | 7.970614 | CCTCTATTTTGTAATCCTCTGTTTTGC | 59.029 | 37.037 | 0.00 | 0.00 | 0.00 | 3.68 |
1926 | 4381 | 9.231297 | TCCTCTATTTTGTAATCCTCTGTTTTG | 57.769 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1927 | 4382 | 9.807921 | TTCCTCTATTTTGTAATCCTCTGTTTT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 2.43 |
1928 | 4383 | 9.807921 | TTTCCTCTATTTTGTAATCCTCTGTTT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
1929 | 4384 | 9.807921 | TTTTCCTCTATTTTGTAATCCTCTGTT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
1930 | 4385 | 9.232473 | GTTTTCCTCTATTTTGTAATCCTCTGT | 57.768 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1931 | 4386 | 9.454859 | AGTTTTCCTCTATTTTGTAATCCTCTG | 57.545 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
1947 | 4402 | 9.981460 | AAATGACCATTCTTATAGTTTTCCTCT | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 3.69 |
1949 | 4404 | 8.971073 | CCAAATGACCATTCTTATAGTTTTCCT | 58.029 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
1950 | 4405 | 8.966868 | TCCAAATGACCATTCTTATAGTTTTCC | 58.033 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
1953 | 4408 | 8.917088 | CCATCCAAATGACCATTCTTATAGTTT | 58.083 | 33.333 | 0.00 | 0.00 | 34.61 | 2.66 |
1954 | 4409 | 8.281531 | TCCATCCAAATGACCATTCTTATAGTT | 58.718 | 33.333 | 0.00 | 0.00 | 34.61 | 2.24 |
1955 | 4410 | 7.815383 | TCCATCCAAATGACCATTCTTATAGT | 58.185 | 34.615 | 0.00 | 0.00 | 34.61 | 2.12 |
1956 | 4411 | 8.571336 | GTTCCATCCAAATGACCATTCTTATAG | 58.429 | 37.037 | 0.00 | 0.00 | 34.61 | 1.31 |
1957 | 4412 | 8.058235 | TGTTCCATCCAAATGACCATTCTTATA | 58.942 | 33.333 | 0.00 | 0.00 | 34.61 | 0.98 |
1958 | 4413 | 6.896860 | TGTTCCATCCAAATGACCATTCTTAT | 59.103 | 34.615 | 0.00 | 0.00 | 34.61 | 1.73 |
1959 | 4414 | 6.152661 | GTGTTCCATCCAAATGACCATTCTTA | 59.847 | 38.462 | 0.00 | 0.00 | 34.61 | 2.10 |
1960 | 4415 | 5.047092 | GTGTTCCATCCAAATGACCATTCTT | 60.047 | 40.000 | 0.00 | 0.00 | 34.61 | 2.52 |
1961 | 4416 | 4.463891 | GTGTTCCATCCAAATGACCATTCT | 59.536 | 41.667 | 0.00 | 0.00 | 34.61 | 2.40 |
1962 | 4417 | 4.220382 | TGTGTTCCATCCAAATGACCATTC | 59.780 | 41.667 | 0.00 | 0.00 | 34.61 | 2.67 |
1963 | 4418 | 4.158786 | TGTGTTCCATCCAAATGACCATT | 58.841 | 39.130 | 0.00 | 0.00 | 34.61 | 3.16 |
1964 | 4419 | 3.765511 | CTGTGTTCCATCCAAATGACCAT | 59.234 | 43.478 | 0.00 | 0.00 | 34.61 | 3.55 |
1965 | 4420 | 3.156293 | CTGTGTTCCATCCAAATGACCA | 58.844 | 45.455 | 0.00 | 0.00 | 34.61 | 4.02 |
1966 | 4421 | 2.493278 | CCTGTGTTCCATCCAAATGACC | 59.507 | 50.000 | 0.00 | 0.00 | 34.61 | 4.02 |
1967 | 4422 | 3.420893 | TCCTGTGTTCCATCCAAATGAC | 58.579 | 45.455 | 0.00 | 0.00 | 34.61 | 3.06 |
1968 | 4423 | 3.805066 | TCCTGTGTTCCATCCAAATGA | 57.195 | 42.857 | 0.00 | 0.00 | 34.61 | 2.57 |
1969 | 4424 | 4.870123 | TTTCCTGTGTTCCATCCAAATG | 57.130 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
1970 | 4425 | 5.130145 | TGTTTTTCCTGTGTTCCATCCAAAT | 59.870 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
1971 | 4426 | 4.467795 | TGTTTTTCCTGTGTTCCATCCAAA | 59.532 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
1972 | 4427 | 4.026744 | TGTTTTTCCTGTGTTCCATCCAA | 58.973 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
1973 | 4428 | 3.383185 | GTGTTTTTCCTGTGTTCCATCCA | 59.617 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1974 | 4429 | 3.383185 | TGTGTTTTTCCTGTGTTCCATCC | 59.617 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
1975 | 4430 | 4.499696 | CCTGTGTTTTTCCTGTGTTCCATC | 60.500 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1976 | 4431 | 3.384467 | CCTGTGTTTTTCCTGTGTTCCAT | 59.616 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1977 | 4432 | 2.757868 | CCTGTGTTTTTCCTGTGTTCCA | 59.242 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
1978 | 4433 | 3.020984 | TCCTGTGTTTTTCCTGTGTTCC | 58.979 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
1979 | 4434 | 4.712122 | TTCCTGTGTTTTTCCTGTGTTC | 57.288 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
1980 | 4435 | 5.011635 | ACTTTTCCTGTGTTTTTCCTGTGTT | 59.988 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1981 | 4436 | 4.526650 | ACTTTTCCTGTGTTTTTCCTGTGT | 59.473 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
1982 | 4437 | 4.864247 | CACTTTTCCTGTGTTTTTCCTGTG | 59.136 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
1983 | 4438 | 4.620567 | GCACTTTTCCTGTGTTTTTCCTGT | 60.621 | 41.667 | 0.00 | 0.00 | 37.70 | 4.00 |
1984 | 4439 | 3.865164 | GCACTTTTCCTGTGTTTTTCCTG | 59.135 | 43.478 | 0.00 | 0.00 | 37.70 | 3.86 |
1985 | 4440 | 3.118775 | GGCACTTTTCCTGTGTTTTTCCT | 60.119 | 43.478 | 0.00 | 0.00 | 37.70 | 3.36 |
1986 | 4441 | 3.118775 | AGGCACTTTTCCTGTGTTTTTCC | 60.119 | 43.478 | 0.00 | 0.00 | 37.70 | 3.13 |
1987 | 4442 | 4.112634 | GAGGCACTTTTCCTGTGTTTTTC | 58.887 | 43.478 | 0.00 | 0.00 | 41.55 | 2.29 |
1988 | 4443 | 3.428862 | CGAGGCACTTTTCCTGTGTTTTT | 60.429 | 43.478 | 0.00 | 0.00 | 41.55 | 1.94 |
1989 | 4444 | 2.099098 | CGAGGCACTTTTCCTGTGTTTT | 59.901 | 45.455 | 0.00 | 0.00 | 41.55 | 2.43 |
1990 | 4445 | 1.676006 | CGAGGCACTTTTCCTGTGTTT | 59.324 | 47.619 | 0.00 | 0.00 | 41.55 | 2.83 |
1991 | 4446 | 1.134220 | TCGAGGCACTTTTCCTGTGTT | 60.134 | 47.619 | 0.00 | 0.00 | 41.55 | 3.32 |
1992 | 4447 | 0.468226 | TCGAGGCACTTTTCCTGTGT | 59.532 | 50.000 | 0.00 | 0.00 | 41.55 | 3.72 |
1993 | 4448 | 1.813513 | ATCGAGGCACTTTTCCTGTG | 58.186 | 50.000 | 0.00 | 0.00 | 41.55 | 3.66 |
1994 | 4449 | 2.039084 | AGAATCGAGGCACTTTTCCTGT | 59.961 | 45.455 | 0.00 | 0.00 | 41.55 | 4.00 |
1995 | 4450 | 2.704572 | AGAATCGAGGCACTTTTCCTG | 58.295 | 47.619 | 0.00 | 0.00 | 41.55 | 3.86 |
1996 | 4451 | 3.676324 | CGTAGAATCGAGGCACTTTTCCT | 60.676 | 47.826 | 0.00 | 0.00 | 41.55 | 3.36 |
1997 | 4452 | 2.603560 | CGTAGAATCGAGGCACTTTTCC | 59.396 | 50.000 | 0.00 | 0.00 | 41.55 | 3.13 |
1998 | 4453 | 2.029365 | GCGTAGAATCGAGGCACTTTTC | 59.971 | 50.000 | 3.30 | 0.00 | 41.55 | 2.29 |
1999 | 4454 | 2.000447 | GCGTAGAATCGAGGCACTTTT | 59.000 | 47.619 | 3.30 | 0.00 | 41.55 | 2.27 |
2000 | 4455 | 1.641577 | GCGTAGAATCGAGGCACTTT | 58.358 | 50.000 | 3.30 | 0.00 | 41.55 | 2.66 |
2001 | 4456 | 0.525668 | CGCGTAGAATCGAGGCACTT | 60.526 | 55.000 | 8.58 | 0.00 | 41.55 | 3.16 |
2002 | 4457 | 2.879163 | TTCGCGTAGAATCGAGGCACT | 61.879 | 52.381 | 5.77 | 0.00 | 35.65 | 4.40 |
2003 | 4458 | 0.524816 | TTCGCGTAGAATCGAGGCAC | 60.525 | 55.000 | 5.77 | 0.00 | 36.02 | 5.01 |
2004 | 4459 | 0.384309 | ATTCGCGTAGAATCGAGGCA | 59.616 | 50.000 | 5.77 | 0.00 | 45.95 | 4.75 |
2005 | 4460 | 3.180984 | ATTCGCGTAGAATCGAGGC | 57.819 | 52.632 | 5.77 | 0.00 | 45.95 | 4.70 |
2035 | 4490 | 8.749354 | GGAATTTCAACATCCACTATAACCTTT | 58.251 | 33.333 | 0.00 | 0.00 | 33.30 | 3.11 |
2036 | 4491 | 8.116026 | AGGAATTTCAACATCCACTATAACCTT | 58.884 | 33.333 | 0.00 | 0.00 | 35.62 | 3.50 |
2037 | 4492 | 7.643123 | AGGAATTTCAACATCCACTATAACCT | 58.357 | 34.615 | 0.00 | 0.00 | 35.62 | 3.50 |
2038 | 4493 | 7.881775 | AGGAATTTCAACATCCACTATAACC | 57.118 | 36.000 | 0.00 | 0.00 | 35.62 | 2.85 |
2042 | 4497 | 9.170890 | TCCTATAGGAATTTCAACATCCACTAT | 57.829 | 33.333 | 19.59 | 0.00 | 42.18 | 2.12 |
2043 | 4498 | 8.561536 | TCCTATAGGAATTTCAACATCCACTA | 57.438 | 34.615 | 19.59 | 0.00 | 42.18 | 2.74 |
2044 | 4499 | 7.451731 | TCCTATAGGAATTTCAACATCCACT | 57.548 | 36.000 | 19.59 | 0.00 | 42.18 | 4.00 |
2060 | 4515 | 6.575254 | GCATTCCTACACCTCAATCCTATAGG | 60.575 | 46.154 | 13.07 | 13.07 | 36.42 | 2.57 |
2061 | 4516 | 6.014242 | TGCATTCCTACACCTCAATCCTATAG | 60.014 | 42.308 | 0.00 | 0.00 | 0.00 | 1.31 |
2062 | 4517 | 5.843969 | TGCATTCCTACACCTCAATCCTATA | 59.156 | 40.000 | 0.00 | 0.00 | 0.00 | 1.31 |
2063 | 4518 | 4.660303 | TGCATTCCTACACCTCAATCCTAT | 59.340 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2064 | 4519 | 4.037222 | TGCATTCCTACACCTCAATCCTA | 58.963 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
2065 | 4520 | 2.846206 | TGCATTCCTACACCTCAATCCT | 59.154 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
2066 | 4521 | 3.281727 | TGCATTCCTACACCTCAATCC | 57.718 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2067 | 4522 | 3.817647 | GGATGCATTCCTACACCTCAATC | 59.182 | 47.826 | 0.00 | 0.00 | 41.78 | 2.67 |
2068 | 4523 | 3.202818 | TGGATGCATTCCTACACCTCAAT | 59.797 | 43.478 | 1.51 | 0.00 | 45.68 | 2.57 |
2069 | 4524 | 2.575735 | TGGATGCATTCCTACACCTCAA | 59.424 | 45.455 | 1.51 | 0.00 | 45.68 | 3.02 |
2070 | 4525 | 2.195727 | TGGATGCATTCCTACACCTCA | 58.804 | 47.619 | 1.51 | 0.00 | 45.68 | 3.86 |
2071 | 4526 | 3.498774 | ATGGATGCATTCCTACACCTC | 57.501 | 47.619 | 1.51 | 0.00 | 45.68 | 3.85 |
2072 | 4527 | 3.328931 | CCTATGGATGCATTCCTACACCT | 59.671 | 47.826 | 4.56 | 0.00 | 45.68 | 4.00 |
2073 | 4528 | 3.327757 | TCCTATGGATGCATTCCTACACC | 59.672 | 47.826 | 4.56 | 0.00 | 45.68 | 4.16 |
2074 | 4529 | 4.623932 | TCCTATGGATGCATTCCTACAC | 57.376 | 45.455 | 4.56 | 0.00 | 45.68 | 2.90 |
2075 | 4530 | 5.848286 | ATTCCTATGGATGCATTCCTACA | 57.152 | 39.130 | 4.56 | 0.00 | 45.68 | 2.74 |
2076 | 4531 | 7.373493 | CAAAATTCCTATGGATGCATTCCTAC | 58.627 | 38.462 | 4.56 | 0.00 | 45.68 | 3.18 |
2077 | 4532 | 6.494491 | CCAAAATTCCTATGGATGCATTCCTA | 59.506 | 38.462 | 4.56 | 0.00 | 45.68 | 2.94 |
2078 | 4533 | 5.306160 | CCAAAATTCCTATGGATGCATTCCT | 59.694 | 40.000 | 4.56 | 0.00 | 45.68 | 3.36 |
2079 | 4534 | 5.305128 | TCCAAAATTCCTATGGATGCATTCC | 59.695 | 40.000 | 4.56 | 5.41 | 45.69 | 3.01 |
2080 | 4535 | 6.409524 | TCCAAAATTCCTATGGATGCATTC | 57.590 | 37.500 | 4.56 | 0.00 | 38.30 | 2.67 |
2081 | 4536 | 5.306160 | CCTCCAAAATTCCTATGGATGCATT | 59.694 | 40.000 | 4.56 | 0.00 | 42.12 | 3.56 |
2082 | 4537 | 4.836736 | CCTCCAAAATTCCTATGGATGCAT | 59.163 | 41.667 | 4.68 | 4.68 | 42.12 | 3.96 |
2083 | 4538 | 4.217510 | CCTCCAAAATTCCTATGGATGCA | 58.782 | 43.478 | 0.00 | 0.00 | 42.12 | 3.96 |
2084 | 4539 | 4.038402 | CACCTCCAAAATTCCTATGGATGC | 59.962 | 45.833 | 0.00 | 0.00 | 42.12 | 3.91 |
2085 | 4540 | 5.068198 | CACACCTCCAAAATTCCTATGGATG | 59.932 | 44.000 | 0.00 | 0.00 | 42.12 | 3.51 |
2086 | 4541 | 5.203528 | CACACCTCCAAAATTCCTATGGAT | 58.796 | 41.667 | 0.00 | 0.00 | 42.12 | 3.41 |
2087 | 4542 | 4.569653 | CCACACCTCCAAAATTCCTATGGA | 60.570 | 45.833 | 0.00 | 0.00 | 40.84 | 3.41 |
2088 | 4543 | 3.701040 | CCACACCTCCAAAATTCCTATGG | 59.299 | 47.826 | 0.00 | 0.00 | 35.49 | 2.74 |
2089 | 4544 | 4.344104 | ACCACACCTCCAAAATTCCTATG | 58.656 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
2090 | 4545 | 4.675063 | ACCACACCTCCAAAATTCCTAT | 57.325 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
2091 | 4546 | 4.403734 | GAACCACACCTCCAAAATTCCTA | 58.596 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
2092 | 4547 | 3.230976 | GAACCACACCTCCAAAATTCCT | 58.769 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
2093 | 4548 | 2.299013 | GGAACCACACCTCCAAAATTCC | 59.701 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2094 | 4549 | 3.230976 | AGGAACCACACCTCCAAAATTC | 58.769 | 45.455 | 0.00 | 0.00 | 33.83 | 2.17 |
2095 | 4550 | 3.328535 | AGGAACCACACCTCCAAAATT | 57.671 | 42.857 | 0.00 | 0.00 | 33.83 | 1.82 |
2096 | 4551 | 3.328535 | AAGGAACCACACCTCCAAAAT | 57.671 | 42.857 | 0.00 | 0.00 | 36.67 | 1.82 |
2097 | 4552 | 2.763448 | CAAAGGAACCACACCTCCAAAA | 59.237 | 45.455 | 0.00 | 0.00 | 36.67 | 2.44 |
2098 | 4553 | 2.024846 | TCAAAGGAACCACACCTCCAAA | 60.025 | 45.455 | 0.00 | 0.00 | 36.67 | 3.28 |
2099 | 4554 | 1.566703 | TCAAAGGAACCACACCTCCAA | 59.433 | 47.619 | 0.00 | 0.00 | 36.67 | 3.53 |
2100 | 4555 | 1.217916 | TCAAAGGAACCACACCTCCA | 58.782 | 50.000 | 0.00 | 0.00 | 36.67 | 3.86 |
2101 | 4556 | 2.437413 | GATCAAAGGAACCACACCTCC | 58.563 | 52.381 | 0.00 | 0.00 | 36.67 | 4.30 |
2102 | 4557 | 2.224769 | TGGATCAAAGGAACCACACCTC | 60.225 | 50.000 | 0.00 | 0.00 | 40.67 | 3.85 |
2103 | 4558 | 1.780309 | TGGATCAAAGGAACCACACCT | 59.220 | 47.619 | 0.00 | 0.00 | 40.67 | 4.00 |
2104 | 4559 | 2.286365 | TGGATCAAAGGAACCACACC | 57.714 | 50.000 | 0.00 | 0.00 | 40.67 | 4.16 |
2105 | 4560 | 4.243007 | CTTTGGATCAAAGGAACCACAC | 57.757 | 45.455 | 11.36 | 0.00 | 44.68 | 3.82 |
2115 | 4570 | 4.772100 | CCTAAAGAAGCCCTTTGGATCAAA | 59.228 | 41.667 | 12.17 | 0.00 | 43.52 | 2.69 |
2116 | 4571 | 4.044065 | TCCTAAAGAAGCCCTTTGGATCAA | 59.956 | 41.667 | 12.17 | 0.00 | 43.52 | 2.57 |
2117 | 4572 | 3.591527 | TCCTAAAGAAGCCCTTTGGATCA | 59.408 | 43.478 | 12.17 | 0.00 | 43.52 | 2.92 |
2118 | 4573 | 4.236527 | TCCTAAAGAAGCCCTTTGGATC | 57.763 | 45.455 | 12.17 | 0.00 | 43.52 | 3.36 |
2119 | 4574 | 4.675063 | TTCCTAAAGAAGCCCTTTGGAT | 57.325 | 40.909 | 12.17 | 0.00 | 43.52 | 3.41 |
2120 | 4575 | 4.463050 | TTTCCTAAAGAAGCCCTTTGGA | 57.537 | 40.909 | 12.17 | 12.16 | 43.52 | 3.53 |
2121 | 4576 | 5.545063 | TTTTTCCTAAAGAAGCCCTTTGG | 57.455 | 39.130 | 10.83 | 8.28 | 44.34 | 3.28 |
2158 | 4613 | 9.539194 | GGATTTTCATAGGAATATTGGAGGATT | 57.461 | 33.333 | 0.00 | 0.00 | 31.93 | 3.01 |
2159 | 4614 | 8.909141 | AGGATTTTCATAGGAATATTGGAGGAT | 58.091 | 33.333 | 0.00 | 0.00 | 31.93 | 3.24 |
2160 | 4615 | 8.293027 | AGGATTTTCATAGGAATATTGGAGGA | 57.707 | 34.615 | 0.00 | 0.00 | 31.93 | 3.71 |
2161 | 4616 | 8.946797 | AAGGATTTTCATAGGAATATTGGAGG | 57.053 | 34.615 | 0.00 | 0.00 | 31.93 | 4.30 |
2162 | 4617 | 9.578576 | TGAAGGATTTTCATAGGAATATTGGAG | 57.421 | 33.333 | 0.00 | 0.00 | 31.93 | 3.86 |
2163 | 4618 | 9.934784 | TTGAAGGATTTTCATAGGAATATTGGA | 57.065 | 29.630 | 0.00 | 0.00 | 31.93 | 3.53 |
2168 | 4623 | 9.934784 | TTGGATTGAAGGATTTTCATAGGAATA | 57.065 | 29.630 | 0.00 | 0.00 | 31.93 | 1.75 |
2169 | 4624 | 8.843308 | TTGGATTGAAGGATTTTCATAGGAAT | 57.157 | 30.769 | 0.00 | 0.00 | 31.93 | 3.01 |
2170 | 4625 | 8.663209 | TTTGGATTGAAGGATTTTCATAGGAA | 57.337 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
2171 | 4626 | 8.115384 | TCTTTGGATTGAAGGATTTTCATAGGA | 58.885 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
2172 | 4627 | 8.297470 | TCTTTGGATTGAAGGATTTTCATAGG | 57.703 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2173 | 4628 | 8.411683 | CCTCTTTGGATTGAAGGATTTTCATAG | 58.588 | 37.037 | 0.00 | 0.00 | 38.35 | 2.23 |
2174 | 4629 | 7.147846 | GCCTCTTTGGATTGAAGGATTTTCATA | 60.148 | 37.037 | 0.00 | 0.00 | 38.35 | 2.15 |
2175 | 4630 | 6.351626 | GCCTCTTTGGATTGAAGGATTTTCAT | 60.352 | 38.462 | 0.00 | 0.00 | 38.35 | 2.57 |
2176 | 4631 | 5.047092 | GCCTCTTTGGATTGAAGGATTTTCA | 60.047 | 40.000 | 0.00 | 0.00 | 38.35 | 2.69 |
2177 | 4632 | 5.414360 | GCCTCTTTGGATTGAAGGATTTTC | 58.586 | 41.667 | 0.00 | 0.00 | 38.35 | 2.29 |
2178 | 4633 | 4.223700 | GGCCTCTTTGGATTGAAGGATTTT | 59.776 | 41.667 | 0.00 | 0.00 | 38.35 | 1.82 |
2179 | 4634 | 3.771479 | GGCCTCTTTGGATTGAAGGATTT | 59.229 | 43.478 | 0.00 | 0.00 | 38.35 | 2.17 |
2180 | 4635 | 3.369175 | GGCCTCTTTGGATTGAAGGATT | 58.631 | 45.455 | 0.00 | 0.00 | 38.35 | 3.01 |
2181 | 4636 | 2.358615 | GGGCCTCTTTGGATTGAAGGAT | 60.359 | 50.000 | 0.84 | 0.00 | 38.35 | 3.24 |
2182 | 4637 | 1.005924 | GGGCCTCTTTGGATTGAAGGA | 59.994 | 52.381 | 0.84 | 0.00 | 38.35 | 3.36 |
2183 | 4638 | 1.478631 | GGGCCTCTTTGGATTGAAGG | 58.521 | 55.000 | 0.84 | 0.00 | 38.35 | 3.46 |
2184 | 4639 | 1.272648 | TGGGGCCTCTTTGGATTGAAG | 60.273 | 52.381 | 3.07 | 0.00 | 38.35 | 3.02 |
2185 | 4640 | 0.783206 | TGGGGCCTCTTTGGATTGAA | 59.217 | 50.000 | 3.07 | 0.00 | 38.35 | 2.69 |
2186 | 4641 | 0.783206 | TTGGGGCCTCTTTGGATTGA | 59.217 | 50.000 | 3.07 | 0.00 | 38.35 | 2.57 |
2187 | 4642 | 1.276138 | GTTTGGGGCCTCTTTGGATTG | 59.724 | 52.381 | 3.07 | 0.00 | 38.35 | 2.67 |
2188 | 4643 | 1.644509 | GTTTGGGGCCTCTTTGGATT | 58.355 | 50.000 | 3.07 | 0.00 | 38.35 | 3.01 |
2189 | 4644 | 0.252239 | GGTTTGGGGCCTCTTTGGAT | 60.252 | 55.000 | 3.07 | 0.00 | 38.35 | 3.41 |
2190 | 4645 | 1.155155 | GGTTTGGGGCCTCTTTGGA | 59.845 | 57.895 | 3.07 | 0.00 | 38.35 | 3.53 |
2191 | 4646 | 1.156095 | AGGTTTGGGGCCTCTTTGG | 59.844 | 57.895 | 3.07 | 0.00 | 39.35 | 3.28 |
2192 | 4647 | 1.187567 | CCAGGTTTGGGGCCTCTTTG | 61.188 | 60.000 | 3.07 | 0.00 | 41.05 | 2.77 |
2193 | 4648 | 1.156095 | CCAGGTTTGGGGCCTCTTT | 59.844 | 57.895 | 3.07 | 0.00 | 41.05 | 2.52 |
2194 | 4649 | 1.778383 | TCCAGGTTTGGGGCCTCTT | 60.778 | 57.895 | 3.07 | 0.00 | 45.10 | 2.85 |
2195 | 4650 | 2.121506 | TCCAGGTTTGGGGCCTCT | 60.122 | 61.111 | 3.07 | 0.00 | 45.10 | 3.69 |
2196 | 4651 | 2.356667 | CTCCAGGTTTGGGGCCTC | 59.643 | 66.667 | 0.84 | 0.00 | 45.10 | 4.70 |
2201 | 4656 | 0.111253 | AGTTCAGCTCCAGGTTTGGG | 59.889 | 55.000 | 0.00 | 0.00 | 45.10 | 4.12 |
2202 | 4657 | 1.202806 | TCAGTTCAGCTCCAGGTTTGG | 60.203 | 52.381 | 0.00 | 0.00 | 46.49 | 3.28 |
2203 | 4658 | 2.149578 | CTCAGTTCAGCTCCAGGTTTG | 58.850 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
2204 | 4659 | 1.544314 | GCTCAGTTCAGCTCCAGGTTT | 60.544 | 52.381 | 0.00 | 0.00 | 36.38 | 3.27 |
2205 | 4660 | 0.036022 | GCTCAGTTCAGCTCCAGGTT | 59.964 | 55.000 | 0.00 | 0.00 | 36.38 | 3.50 |
2206 | 4661 | 1.676384 | GCTCAGTTCAGCTCCAGGT | 59.324 | 57.895 | 0.00 | 0.00 | 36.38 | 4.00 |
2207 | 4662 | 1.078567 | GGCTCAGTTCAGCTCCAGG | 60.079 | 63.158 | 0.00 | 0.00 | 39.58 | 4.45 |
2208 | 4663 | 0.252479 | ATGGCTCAGTTCAGCTCCAG | 59.748 | 55.000 | 0.00 | 0.00 | 39.58 | 3.86 |
2209 | 4664 | 0.251354 | GATGGCTCAGTTCAGCTCCA | 59.749 | 55.000 | 0.00 | 0.00 | 39.58 | 3.86 |
2210 | 4665 | 0.540923 | AGATGGCTCAGTTCAGCTCC | 59.459 | 55.000 | 0.00 | 0.00 | 39.58 | 4.70 |
2211 | 4666 | 2.802774 | GCTAGATGGCTCAGTTCAGCTC | 60.803 | 54.545 | 0.00 | 0.00 | 39.58 | 4.09 |
2212 | 4667 | 1.138661 | GCTAGATGGCTCAGTTCAGCT | 59.861 | 52.381 | 0.00 | 0.00 | 39.58 | 4.24 |
2213 | 4668 | 1.138661 | AGCTAGATGGCTCAGTTCAGC | 59.861 | 52.381 | 0.00 | 0.00 | 38.24 | 4.26 |
2214 | 4669 | 4.367450 | GTTAGCTAGATGGCTCAGTTCAG | 58.633 | 47.826 | 0.00 | 0.00 | 42.97 | 3.02 |
2215 | 4670 | 3.181486 | CGTTAGCTAGATGGCTCAGTTCA | 60.181 | 47.826 | 0.00 | 0.00 | 42.97 | 3.18 |
2216 | 4671 | 3.376540 | CGTTAGCTAGATGGCTCAGTTC | 58.623 | 50.000 | 0.00 | 0.00 | 42.97 | 3.01 |
2217 | 4672 | 2.101582 | CCGTTAGCTAGATGGCTCAGTT | 59.898 | 50.000 | 0.00 | 0.00 | 42.97 | 3.16 |
2218 | 4673 | 1.683917 | CCGTTAGCTAGATGGCTCAGT | 59.316 | 52.381 | 0.00 | 0.00 | 42.97 | 3.41 |
2219 | 4674 | 1.683917 | ACCGTTAGCTAGATGGCTCAG | 59.316 | 52.381 | 11.76 | 0.00 | 42.97 | 3.35 |
2220 | 4675 | 1.776662 | ACCGTTAGCTAGATGGCTCA | 58.223 | 50.000 | 11.76 | 0.00 | 42.97 | 4.26 |
2221 | 4676 | 2.350580 | CGTACCGTTAGCTAGATGGCTC | 60.351 | 54.545 | 11.76 | 6.61 | 42.97 | 4.70 |
2222 | 4677 | 1.607628 | CGTACCGTTAGCTAGATGGCT | 59.392 | 52.381 | 11.76 | 0.00 | 45.29 | 4.75 |
2223 | 4678 | 1.336125 | ACGTACCGTTAGCTAGATGGC | 59.664 | 52.381 | 11.76 | 0.00 | 36.35 | 4.40 |
2224 | 4679 | 3.812053 | AGTACGTACCGTTAGCTAGATGG | 59.188 | 47.826 | 21.80 | 10.76 | 41.54 | 3.51 |
2225 | 4680 | 4.509230 | TCAGTACGTACCGTTAGCTAGATG | 59.491 | 45.833 | 21.80 | 9.15 | 41.54 | 2.90 |
2226 | 4681 | 4.697514 | TCAGTACGTACCGTTAGCTAGAT | 58.302 | 43.478 | 21.80 | 0.00 | 41.54 | 1.98 |
2227 | 4682 | 4.115516 | CTCAGTACGTACCGTTAGCTAGA | 58.884 | 47.826 | 21.80 | 5.86 | 41.54 | 2.43 |
2228 | 4683 | 4.115516 | TCTCAGTACGTACCGTTAGCTAG | 58.884 | 47.826 | 21.80 | 4.61 | 41.54 | 3.42 |
2229 | 4684 | 4.115516 | CTCTCAGTACGTACCGTTAGCTA | 58.884 | 47.826 | 21.80 | 0.00 | 41.54 | 3.32 |
2230 | 4685 | 2.935201 | CTCTCAGTACGTACCGTTAGCT | 59.065 | 50.000 | 21.80 | 0.00 | 41.54 | 3.32 |
2231 | 4686 | 2.932614 | TCTCTCAGTACGTACCGTTAGC | 59.067 | 50.000 | 21.80 | 0.00 | 41.54 | 3.09 |
2232 | 4687 | 3.555139 | CCTCTCTCAGTACGTACCGTTAG | 59.445 | 52.174 | 21.80 | 14.20 | 41.54 | 2.34 |
2233 | 4688 | 3.525537 | CCTCTCTCAGTACGTACCGTTA | 58.474 | 50.000 | 21.80 | 5.30 | 41.54 | 3.18 |
2234 | 4689 | 2.354259 | CCTCTCTCAGTACGTACCGTT | 58.646 | 52.381 | 21.80 | 0.72 | 41.54 | 4.44 |
2235 | 4690 | 1.406614 | CCCTCTCTCAGTACGTACCGT | 60.407 | 57.143 | 21.80 | 1.52 | 44.35 | 4.83 |
2236 | 4691 | 1.297664 | CCCTCTCTCAGTACGTACCG | 58.702 | 60.000 | 21.80 | 12.46 | 0.00 | 4.02 |
2237 | 4692 | 1.023502 | GCCCTCTCTCAGTACGTACC | 58.976 | 60.000 | 21.80 | 4.66 | 0.00 | 3.34 |
2238 | 4693 | 0.656785 | CGCCCTCTCTCAGTACGTAC | 59.343 | 60.000 | 18.10 | 18.10 | 0.00 | 3.67 |
2239 | 4694 | 0.538584 | TCGCCCTCTCTCAGTACGTA | 59.461 | 55.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2240 | 4695 | 1.025647 | GTCGCCCTCTCTCAGTACGT | 61.026 | 60.000 | 0.00 | 0.00 | 0.00 | 3.57 |
2241 | 4696 | 1.722677 | GTCGCCCTCTCTCAGTACG | 59.277 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
2242 | 4697 | 1.716826 | CCGTCGCCCTCTCTCAGTAC | 61.717 | 65.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2243 | 4698 | 1.451567 | CCGTCGCCCTCTCTCAGTA | 60.452 | 63.158 | 0.00 | 0.00 | 0.00 | 2.74 |
2244 | 4699 | 2.752238 | CCGTCGCCCTCTCTCAGT | 60.752 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2245 | 4700 | 3.522731 | CCCGTCGCCCTCTCTCAG | 61.523 | 72.222 | 0.00 | 0.00 | 0.00 | 3.35 |
2257 | 4712 | 4.534141 | TAAATCGCCCGCCCCGTC | 62.534 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2258 | 4713 | 2.897172 | ATTTAAATCGCCCGCCCCGT | 62.897 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2259 | 4714 | 1.730451 | AATTTAAATCGCCCGCCCCG | 61.730 | 55.000 | 0.10 | 0.00 | 0.00 | 5.73 |
2260 | 4715 | 0.031585 | GAATTTAAATCGCCCGCCCC | 59.968 | 55.000 | 0.10 | 0.00 | 0.00 | 5.80 |
2261 | 4716 | 0.317519 | CGAATTTAAATCGCCCGCCC | 60.318 | 55.000 | 0.10 | 0.00 | 33.07 | 6.13 |
2262 | 4717 | 3.157922 | CGAATTTAAATCGCCCGCC | 57.842 | 52.632 | 0.10 | 0.00 | 33.07 | 6.13 |
2315 | 4770 | 3.991051 | ACCCTGACCGACACAGCG | 61.991 | 66.667 | 0.00 | 0.00 | 34.47 | 5.18 |
2316 | 4771 | 2.357517 | CACCCTGACCGACACAGC | 60.358 | 66.667 | 0.00 | 0.00 | 34.47 | 4.40 |
2317 | 4772 | 1.754380 | TTCCACCCTGACCGACACAG | 61.754 | 60.000 | 0.00 | 0.00 | 35.43 | 3.66 |
2318 | 4773 | 1.338890 | TTTCCACCCTGACCGACACA | 61.339 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2319 | 4774 | 0.883370 | GTTTCCACCCTGACCGACAC | 60.883 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2320 | 4775 | 1.448497 | GTTTCCACCCTGACCGACA | 59.552 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
2321 | 4776 | 1.666872 | CGTTTCCACCCTGACCGAC | 60.667 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2322 | 4777 | 2.738480 | CGTTTCCACCCTGACCGA | 59.262 | 61.111 | 0.00 | 0.00 | 0.00 | 4.69 |
2323 | 4778 | 3.047877 | GCGTTTCCACCCTGACCG | 61.048 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2324 | 4779 | 3.047877 | CGCGTTTCCACCCTGACC | 61.048 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2325 | 4780 | 2.280592 | ACGCGTTTCCACCCTGAC | 60.281 | 61.111 | 5.58 | 0.00 | 0.00 | 3.51 |
2326 | 4781 | 2.280524 | CACGCGTTTCCACCCTGA | 60.281 | 61.111 | 10.22 | 0.00 | 0.00 | 3.86 |
2327 | 4782 | 3.353836 | CCACGCGTTTCCACCCTG | 61.354 | 66.667 | 10.22 | 0.00 | 0.00 | 4.45 |
2328 | 4783 | 4.636435 | CCCACGCGTTTCCACCCT | 62.636 | 66.667 | 10.22 | 0.00 | 0.00 | 4.34 |
2367 | 4822 | 4.760047 | CGAGGCCCAGGTTGGTCG | 62.760 | 72.222 | 0.00 | 0.00 | 35.17 | 4.79 |
2379 | 4834 | 2.629656 | AACTGCATGTTGGCGAGGC | 61.630 | 57.895 | 0.00 | 0.00 | 37.52 | 4.70 |
2380 | 4835 | 3.672293 | AACTGCATGTTGGCGAGG | 58.328 | 55.556 | 0.00 | 0.00 | 37.52 | 4.63 |
2387 | 4842 | 1.071699 | ACCCGACTACAACTGCATGTT | 59.928 | 47.619 | 0.00 | 0.00 | 39.92 | 2.71 |
2388 | 4843 | 0.685097 | ACCCGACTACAACTGCATGT | 59.315 | 50.000 | 0.00 | 0.00 | 37.32 | 3.21 |
2389 | 4844 | 1.808411 | AACCCGACTACAACTGCATG | 58.192 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2390 | 4845 | 2.300723 | TGTAACCCGACTACAACTGCAT | 59.699 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
2391 | 4846 | 1.687660 | TGTAACCCGACTACAACTGCA | 59.312 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2392 | 4847 | 2.443887 | TGTAACCCGACTACAACTGC | 57.556 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2396 | 4851 | 1.340889 | AGCGTTGTAACCCGACTACAA | 59.659 | 47.619 | 0.00 | 0.00 | 37.01 | 2.41 |
2397 | 4852 | 0.961019 | AGCGTTGTAACCCGACTACA | 59.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2398 | 4853 | 1.723003 | CAAGCGTTGTAACCCGACTAC | 59.277 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
2399 | 4854 | 1.340889 | ACAAGCGTTGTAACCCGACTA | 59.659 | 47.619 | 2.19 | 0.00 | 43.27 | 2.59 |
2400 | 4855 | 0.105408 | ACAAGCGTTGTAACCCGACT | 59.895 | 50.000 | 2.19 | 0.00 | 43.27 | 4.18 |
2401 | 4856 | 2.608640 | ACAAGCGTTGTAACCCGAC | 58.391 | 52.632 | 2.19 | 0.00 | 43.27 | 4.79 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.