Multiple sequence alignment - TraesCS3B01G261000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G261000 chr3B 100.000 3631 0 0 1 3631 419055512 419059142 0.000000e+00 6706.0
1 TraesCS3B01G261000 chr3B 93.750 64 1 3 183 243 144355264 144355201 3.860000e-15 93.5
2 TraesCS3B01G261000 chr3D 95.050 2182 75 17 682 2851 301894170 301892010 0.000000e+00 3400.0
3 TraesCS3B01G261000 chr3D 92.224 553 25 6 3088 3631 301891774 301891231 0.000000e+00 767.0
4 TraesCS3B01G261000 chr3D 91.703 229 10 4 2879 3104 301892012 301891790 3.520000e-80 309.0
5 TraesCS3B01G261000 chr3A 91.328 2168 99 27 1495 3628 433329004 433331116 0.000000e+00 2880.0
6 TraesCS3B01G261000 chr3A 92.345 823 41 9 682 1487 433326361 433327178 0.000000e+00 1151.0
7 TraesCS3B01G261000 chr3A 86.170 94 9 4 273 365 380911323 380911233 8.300000e-17 99.0
8 TraesCS3B01G261000 chr1D 88.844 493 49 5 1 492 74532748 74532261 5.190000e-168 601.0
9 TraesCS3B01G261000 chr5B 93.750 64 1 3 183 243 49501189 49501126 3.860000e-15 93.5
10 TraesCS3B01G261000 chr5B 93.750 64 1 3 183 243 72091273 72091210 3.860000e-15 93.5
11 TraesCS3B01G261000 chrUn 93.333 60 2 2 185 243 49949383 49949325 1.800000e-13 87.9
12 TraesCS3B01G261000 chr7D 92.188 64 2 3 183 243 477106846 477106783 1.800000e-13 87.9
13 TraesCS3B01G261000 chr5A 93.333 60 2 2 190 248 260656712 260656770 1.800000e-13 87.9
14 TraesCS3B01G261000 chr4D 93.333 60 2 2 185 243 68094642 68094700 1.800000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G261000 chr3B 419055512 419059142 3630 False 6706.0 6706 100.000000 1 3631 1 chr3B.!!$F1 3630
1 TraesCS3B01G261000 chr3D 301891231 301894170 2939 True 1492.0 3400 92.992333 682 3631 3 chr3D.!!$R1 2949
2 TraesCS3B01G261000 chr3A 433326361 433331116 4755 False 2015.5 2880 91.836500 682 3628 2 chr3A.!!$F1 2946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
461 462 0.033699 GGGCTGGCCAATCTCTCTTT 60.034 55.0 16.34 0.0 37.98 2.52 F
564 565 0.036732 TGCGAGAGACAAAATGCCCT 59.963 50.0 0.00 0.0 0.00 5.19 F
596 597 0.106708 TGACCAGCGCAAAGTTCTCT 59.893 50.0 11.47 0.0 0.00 3.10 F
602 603 0.242017 GCGCAAAGTTCTCTTGCCAT 59.758 50.0 0.30 0.0 33.79 4.40 F
2570 4421 0.250597 AGTTTACAGGCGGGTTCACC 60.251 55.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 3696 0.248134 GGTCATCGACGAAGGACGAG 60.248 60.000 20.06 0.68 45.77 4.18 R
2266 4107 3.726517 CGCCAACTTGACCTGCGG 61.727 66.667 0.00 0.00 41.42 5.69 R
2473 4323 4.096984 AGACCTAAAACCGTCCTATGTACG 59.903 45.833 0.00 0.00 40.01 3.67 R
2582 4433 4.320494 CGTTTTAGCTCATCAAAAGCACCT 60.320 41.667 0.00 0.00 42.35 4.00 R
3561 5466 4.530857 CCCGAGACGATGGCCACC 62.531 72.222 8.16 0.00 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.232188 TGACTTGTAGAGGTCGGTATCT 57.768 45.455 0.00 0.00 35.45 1.98
22 23 4.597004 TGACTTGTAGAGGTCGGTATCTT 58.403 43.478 0.00 0.00 35.45 2.40
23 24 4.639310 TGACTTGTAGAGGTCGGTATCTTC 59.361 45.833 0.00 0.00 35.45 2.87
24 25 3.626670 ACTTGTAGAGGTCGGTATCTTCG 59.373 47.826 0.00 0.00 0.00 3.79
25 26 3.272574 TGTAGAGGTCGGTATCTTCGT 57.727 47.619 0.00 0.00 0.00 3.85
26 27 4.406648 TGTAGAGGTCGGTATCTTCGTA 57.593 45.455 0.00 0.00 0.00 3.43
27 28 4.375272 TGTAGAGGTCGGTATCTTCGTAG 58.625 47.826 0.00 0.00 0.00 3.51
28 29 3.834489 AGAGGTCGGTATCTTCGTAGA 57.166 47.619 0.00 0.00 34.21 2.59
29 30 3.465871 AGAGGTCGGTATCTTCGTAGAC 58.534 50.000 0.00 0.00 34.32 2.59
30 31 2.208431 AGGTCGGTATCTTCGTAGACG 58.792 52.381 0.00 0.00 34.32 4.18
31 32 1.262683 GGTCGGTATCTTCGTAGACGG 59.737 57.143 1.67 0.00 40.29 4.79
32 33 1.936547 GTCGGTATCTTCGTAGACGGT 59.063 52.381 1.67 0.00 40.29 4.83
33 34 1.935873 TCGGTATCTTCGTAGACGGTG 59.064 52.381 1.67 0.00 40.29 4.94
34 35 1.935873 CGGTATCTTCGTAGACGGTGA 59.064 52.381 1.67 1.72 40.29 4.02
35 36 2.547211 CGGTATCTTCGTAGACGGTGAT 59.453 50.000 1.67 8.63 40.29 3.06
36 37 3.606384 CGGTATCTTCGTAGACGGTGATG 60.606 52.174 15.61 2.52 40.29 3.07
37 38 3.562973 GGTATCTTCGTAGACGGTGATGA 59.437 47.826 15.61 2.28 40.29 2.92
38 39 3.694535 ATCTTCGTAGACGGTGATGAC 57.305 47.619 1.67 0.00 40.29 3.06
39 40 1.741706 TCTTCGTAGACGGTGATGACC 59.258 52.381 1.67 0.00 40.29 4.02
40 41 1.743958 CTTCGTAGACGGTGATGACCT 59.256 52.381 0.00 0.00 40.58 3.85
41 42 1.376543 TCGTAGACGGTGATGACCTC 58.623 55.000 0.00 0.00 40.58 3.85
42 43 0.381089 CGTAGACGGTGATGACCTCC 59.619 60.000 0.00 0.00 40.58 4.30
43 44 1.765230 GTAGACGGTGATGACCTCCT 58.235 55.000 0.00 0.00 40.58 3.69
44 45 1.677052 GTAGACGGTGATGACCTCCTC 59.323 57.143 0.00 0.00 40.58 3.71
45 46 0.039764 AGACGGTGATGACCTCCTCA 59.960 55.000 0.00 0.00 40.58 3.86
46 47 0.895530 GACGGTGATGACCTCCTCAA 59.104 55.000 0.00 0.00 40.58 3.02
47 48 0.608640 ACGGTGATGACCTCCTCAAC 59.391 55.000 0.00 0.00 40.58 3.18
48 49 0.458543 CGGTGATGACCTCCTCAACG 60.459 60.000 0.00 4.02 44.98 4.10
49 50 0.108138 GGTGATGACCTCCTCAACGG 60.108 60.000 0.00 0.00 39.47 4.44
50 51 0.895530 GTGATGACCTCCTCAACGGA 59.104 55.000 0.00 0.00 40.30 4.69
58 59 2.579878 TCCTCAACGGAGTAGCAGG 58.420 57.895 0.00 0.00 45.00 4.85
59 60 0.970937 TCCTCAACGGAGTAGCAGGG 60.971 60.000 0.00 0.00 45.00 4.45
60 61 0.970937 CCTCAACGGAGTAGCAGGGA 60.971 60.000 0.00 0.00 45.00 4.20
61 62 0.895530 CTCAACGGAGTAGCAGGGAA 59.104 55.000 0.00 0.00 45.00 3.97
62 63 1.275291 CTCAACGGAGTAGCAGGGAAA 59.725 52.381 0.00 0.00 45.00 3.13
63 64 1.695242 TCAACGGAGTAGCAGGGAAAA 59.305 47.619 0.00 0.00 45.00 2.29
64 65 2.105134 TCAACGGAGTAGCAGGGAAAAA 59.895 45.455 0.00 0.00 45.00 1.94
65 66 3.081804 CAACGGAGTAGCAGGGAAAAAT 58.918 45.455 0.00 0.00 45.00 1.82
66 67 2.711542 ACGGAGTAGCAGGGAAAAATG 58.288 47.619 0.00 0.00 41.94 2.32
67 68 2.017049 CGGAGTAGCAGGGAAAAATGG 58.983 52.381 0.00 0.00 0.00 3.16
68 69 2.355716 CGGAGTAGCAGGGAAAAATGGA 60.356 50.000 0.00 0.00 0.00 3.41
69 70 3.017442 GGAGTAGCAGGGAAAAATGGAC 58.983 50.000 0.00 0.00 0.00 4.02
70 71 2.678336 GAGTAGCAGGGAAAAATGGACG 59.322 50.000 0.00 0.00 0.00 4.79
71 72 1.132453 GTAGCAGGGAAAAATGGACGC 59.868 52.381 0.00 0.00 0.00 5.19
72 73 1.154035 GCAGGGAAAAATGGACGCG 60.154 57.895 3.53 3.53 0.00 6.01
73 74 1.582610 GCAGGGAAAAATGGACGCGA 61.583 55.000 15.93 0.00 0.00 5.87
74 75 1.094785 CAGGGAAAAATGGACGCGAT 58.905 50.000 15.93 0.00 0.00 4.58
75 76 1.472480 CAGGGAAAAATGGACGCGATT 59.528 47.619 15.93 0.00 0.00 3.34
76 77 1.472480 AGGGAAAAATGGACGCGATTG 59.528 47.619 15.93 0.00 0.00 2.67
77 78 1.470890 GGGAAAAATGGACGCGATTGA 59.529 47.619 15.93 0.00 0.00 2.57
78 79 2.477863 GGGAAAAATGGACGCGATTGAG 60.478 50.000 15.93 0.00 0.00 3.02
79 80 2.477863 GGAAAAATGGACGCGATTGAGG 60.478 50.000 15.93 0.00 0.00 3.86
80 81 2.107950 AAAATGGACGCGATTGAGGA 57.892 45.000 15.93 0.00 0.00 3.71
81 82 1.656652 AAATGGACGCGATTGAGGAG 58.343 50.000 15.93 0.00 0.00 3.69
82 83 0.824109 AATGGACGCGATTGAGGAGA 59.176 50.000 15.93 0.00 0.00 3.71
83 84 0.824109 ATGGACGCGATTGAGGAGAA 59.176 50.000 15.93 0.00 0.00 2.87
84 85 0.173481 TGGACGCGATTGAGGAGAAG 59.827 55.000 15.93 0.00 0.00 2.85
85 86 1.148759 GGACGCGATTGAGGAGAAGC 61.149 60.000 15.93 0.00 0.00 3.86
86 87 3.303605 CGCGATTGAGGAGAAGCG 58.696 61.111 0.00 0.00 41.56 4.68
87 88 2.233654 CGCGATTGAGGAGAAGCGG 61.234 63.158 0.00 0.00 43.29 5.52
88 89 1.884926 GCGATTGAGGAGAAGCGGG 60.885 63.158 0.00 0.00 35.32 6.13
89 90 1.816537 CGATTGAGGAGAAGCGGGA 59.183 57.895 0.00 0.00 31.19 5.14
90 91 0.175760 CGATTGAGGAGAAGCGGGAA 59.824 55.000 0.00 0.00 31.19 3.97
91 92 1.804372 CGATTGAGGAGAAGCGGGAAG 60.804 57.143 0.00 0.00 31.19 3.46
92 93 0.543749 ATTGAGGAGAAGCGGGAAGG 59.456 55.000 0.00 0.00 0.00 3.46
93 94 1.553690 TTGAGGAGAAGCGGGAAGGG 61.554 60.000 0.00 0.00 0.00 3.95
94 95 2.689034 AGGAGAAGCGGGAAGGGG 60.689 66.667 0.00 0.00 0.00 4.79
95 96 4.491409 GGAGAAGCGGGAAGGGGC 62.491 72.222 0.00 0.00 0.00 5.80
96 97 4.840005 GAGAAGCGGGAAGGGGCG 62.840 72.222 0.00 0.00 0.00 6.13
98 99 4.176752 GAAGCGGGAAGGGGCGAT 62.177 66.667 0.00 0.00 0.00 4.58
99 100 4.176752 AAGCGGGAAGGGGCGATC 62.177 66.667 0.00 0.00 0.00 3.69
112 113 2.026734 CGATCGCCGCTGTCTGAT 59.973 61.111 0.26 0.00 0.00 2.90
113 114 1.589993 CGATCGCCGCTGTCTGATT 60.590 57.895 0.26 0.00 0.00 2.57
114 115 1.815212 CGATCGCCGCTGTCTGATTG 61.815 60.000 0.26 0.00 0.00 2.67
115 116 2.098842 GATCGCCGCTGTCTGATTGC 62.099 60.000 0.00 0.00 0.00 3.56
116 117 2.584261 ATCGCCGCTGTCTGATTGCT 62.584 55.000 0.00 0.00 0.00 3.91
117 118 2.789917 GCCGCTGTCTGATTGCTG 59.210 61.111 4.00 0.00 0.00 4.41
118 119 2.758089 GCCGCTGTCTGATTGCTGG 61.758 63.158 4.00 7.09 0.00 4.85
119 120 1.376424 CCGCTGTCTGATTGCTGGT 60.376 57.895 4.00 0.00 0.00 4.00
120 121 1.642037 CCGCTGTCTGATTGCTGGTG 61.642 60.000 4.00 0.00 0.00 4.17
121 122 0.952497 CGCTGTCTGATTGCTGGTGT 60.952 55.000 4.00 0.00 0.00 4.16
122 123 0.801251 GCTGTCTGATTGCTGGTGTC 59.199 55.000 0.00 0.00 0.00 3.67
123 124 1.073964 CTGTCTGATTGCTGGTGTCG 58.926 55.000 0.00 0.00 0.00 4.35
124 125 0.678950 TGTCTGATTGCTGGTGTCGA 59.321 50.000 0.00 0.00 0.00 4.20
125 126 1.337167 TGTCTGATTGCTGGTGTCGAG 60.337 52.381 0.00 0.00 0.00 4.04
126 127 0.247460 TCTGATTGCTGGTGTCGAGG 59.753 55.000 0.00 0.00 0.00 4.63
127 128 0.247460 CTGATTGCTGGTGTCGAGGA 59.753 55.000 0.00 0.00 0.00 3.71
128 129 0.904649 TGATTGCTGGTGTCGAGGAT 59.095 50.000 0.00 0.00 0.00 3.24
129 130 1.293924 GATTGCTGGTGTCGAGGATG 58.706 55.000 0.00 0.00 0.00 3.51
130 131 0.107508 ATTGCTGGTGTCGAGGATGG 60.108 55.000 0.00 0.00 0.00 3.51
131 132 2.512515 GCTGGTGTCGAGGATGGC 60.513 66.667 0.00 0.00 0.00 4.40
132 133 2.981302 CTGGTGTCGAGGATGGCA 59.019 61.111 0.00 0.00 0.00 4.92
133 134 1.524002 CTGGTGTCGAGGATGGCAT 59.476 57.895 0.00 0.00 0.00 4.40
134 135 0.531532 CTGGTGTCGAGGATGGCATC 60.532 60.000 19.23 19.23 0.00 3.91
139 140 2.501128 CGAGGATGGCATCGTGGT 59.499 61.111 25.77 8.54 42.78 4.16
140 141 1.739667 CGAGGATGGCATCGTGGTA 59.260 57.895 25.77 0.00 42.78 3.25
141 142 0.319040 CGAGGATGGCATCGTGGTAG 60.319 60.000 25.77 11.19 42.78 3.18
142 143 0.601311 GAGGATGGCATCGTGGTAGC 60.601 60.000 25.77 8.53 0.00 3.58
143 144 1.050988 AGGATGGCATCGTGGTAGCT 61.051 55.000 20.86 7.99 0.00 3.32
144 145 0.601311 GGATGGCATCGTGGTAGCTC 60.601 60.000 20.50 0.33 0.00 4.09
145 146 0.390860 GATGGCATCGTGGTAGCTCT 59.609 55.000 12.40 0.00 0.00 4.09
146 147 0.833287 ATGGCATCGTGGTAGCTCTT 59.167 50.000 0.00 0.00 0.00 2.85
147 148 0.108186 TGGCATCGTGGTAGCTCTTG 60.108 55.000 0.00 0.00 0.00 3.02
148 149 0.175760 GGCATCGTGGTAGCTCTTGA 59.824 55.000 0.00 0.00 0.00 3.02
149 150 1.202580 GGCATCGTGGTAGCTCTTGAT 60.203 52.381 0.00 0.00 0.00 2.57
150 151 1.863454 GCATCGTGGTAGCTCTTGATG 59.137 52.381 0.00 0.00 37.01 3.07
151 152 2.739932 GCATCGTGGTAGCTCTTGATGT 60.740 50.000 12.80 0.00 36.48 3.06
152 153 3.490933 GCATCGTGGTAGCTCTTGATGTA 60.491 47.826 12.80 0.00 36.48 2.29
153 154 4.294232 CATCGTGGTAGCTCTTGATGTAG 58.706 47.826 0.00 0.00 0.00 2.74
154 155 3.353557 TCGTGGTAGCTCTTGATGTAGT 58.646 45.455 0.00 0.00 0.00 2.73
155 156 3.762288 TCGTGGTAGCTCTTGATGTAGTT 59.238 43.478 0.00 0.00 0.00 2.24
156 157 4.945543 TCGTGGTAGCTCTTGATGTAGTTA 59.054 41.667 0.00 0.00 0.00 2.24
157 158 5.593095 TCGTGGTAGCTCTTGATGTAGTTAT 59.407 40.000 0.00 0.00 0.00 1.89
158 159 5.915758 CGTGGTAGCTCTTGATGTAGTTATC 59.084 44.000 0.00 0.00 0.00 1.75
159 160 6.459710 CGTGGTAGCTCTTGATGTAGTTATCA 60.460 42.308 0.00 0.00 35.38 2.15
160 161 7.437748 GTGGTAGCTCTTGATGTAGTTATCAT 58.562 38.462 0.00 0.00 36.97 2.45
161 162 7.928706 GTGGTAGCTCTTGATGTAGTTATCATT 59.071 37.037 0.00 0.00 36.97 2.57
162 163 8.486210 TGGTAGCTCTTGATGTAGTTATCATTT 58.514 33.333 0.00 0.00 36.97 2.32
163 164 8.983724 GGTAGCTCTTGATGTAGTTATCATTTC 58.016 37.037 0.00 0.00 36.97 2.17
164 165 8.983724 GTAGCTCTTGATGTAGTTATCATTTCC 58.016 37.037 0.00 0.00 36.97 3.13
165 166 6.995091 AGCTCTTGATGTAGTTATCATTTCCC 59.005 38.462 0.00 0.00 36.97 3.97
166 167 6.767902 GCTCTTGATGTAGTTATCATTTCCCA 59.232 38.462 0.00 0.00 36.97 4.37
167 168 7.254932 GCTCTTGATGTAGTTATCATTTCCCAC 60.255 40.741 0.00 0.00 36.97 4.61
168 169 7.054124 TCTTGATGTAGTTATCATTTCCCACC 58.946 38.462 0.00 0.00 36.97 4.61
169 170 6.320434 TGATGTAGTTATCATTTCCCACCA 57.680 37.500 0.00 0.00 32.39 4.17
170 171 6.910191 TGATGTAGTTATCATTTCCCACCAT 58.090 36.000 0.00 0.00 32.39 3.55
171 172 6.998074 TGATGTAGTTATCATTTCCCACCATC 59.002 38.462 0.00 0.00 32.39 3.51
172 173 6.575244 TGTAGTTATCATTTCCCACCATCT 57.425 37.500 0.00 0.00 0.00 2.90
173 174 7.684317 TGTAGTTATCATTTCCCACCATCTA 57.316 36.000 0.00 0.00 0.00 1.98
174 175 8.096621 TGTAGTTATCATTTCCCACCATCTAA 57.903 34.615 0.00 0.00 0.00 2.10
175 176 7.990886 TGTAGTTATCATTTCCCACCATCTAAC 59.009 37.037 0.00 0.00 0.00 2.34
176 177 7.213178 AGTTATCATTTCCCACCATCTAACT 57.787 36.000 0.00 0.00 0.00 2.24
177 178 7.283329 AGTTATCATTTCCCACCATCTAACTC 58.717 38.462 0.00 0.00 0.00 3.01
178 179 5.715439 ATCATTTCCCACCATCTAACTCA 57.285 39.130 0.00 0.00 0.00 3.41
179 180 4.843728 TCATTTCCCACCATCTAACTCAC 58.156 43.478 0.00 0.00 0.00 3.51
180 181 4.288366 TCATTTCCCACCATCTAACTCACA 59.712 41.667 0.00 0.00 0.00 3.58
181 182 3.695830 TTCCCACCATCTAACTCACAC 57.304 47.619 0.00 0.00 0.00 3.82
182 183 2.615391 TCCCACCATCTAACTCACACA 58.385 47.619 0.00 0.00 0.00 3.72
183 184 2.567169 TCCCACCATCTAACTCACACAG 59.433 50.000 0.00 0.00 0.00 3.66
184 185 2.567169 CCCACCATCTAACTCACACAGA 59.433 50.000 0.00 0.00 0.00 3.41
197 198 3.095332 TCACACAGAGAGAAGAGATGGG 58.905 50.000 0.00 0.00 0.00 4.00
198 199 3.095332 CACACAGAGAGAAGAGATGGGA 58.905 50.000 0.00 0.00 0.00 4.37
199 200 3.130869 CACACAGAGAGAAGAGATGGGAG 59.869 52.174 0.00 0.00 0.00 4.30
200 201 2.694628 CACAGAGAGAAGAGATGGGAGG 59.305 54.545 0.00 0.00 0.00 4.30
201 202 2.318908 CAGAGAGAAGAGATGGGAGGG 58.681 57.143 0.00 0.00 0.00 4.30
202 203 1.047801 GAGAGAAGAGATGGGAGGGC 58.952 60.000 0.00 0.00 0.00 5.19
203 204 0.341258 AGAGAAGAGATGGGAGGGCA 59.659 55.000 0.00 0.00 0.00 5.36
204 205 0.467804 GAGAAGAGATGGGAGGGCAC 59.532 60.000 0.00 0.00 0.00 5.01
217 218 2.036256 GGCACCTTGTCCATGGCT 59.964 61.111 6.96 0.00 36.08 4.75
218 219 2.345760 GGCACCTTGTCCATGGCTG 61.346 63.158 6.96 0.00 36.08 4.85
219 220 2.998279 GCACCTTGTCCATGGCTGC 61.998 63.158 6.96 4.77 0.00 5.25
220 221 1.604308 CACCTTGTCCATGGCTGCA 60.604 57.895 6.96 2.95 0.00 4.41
221 222 1.303888 ACCTTGTCCATGGCTGCAG 60.304 57.895 10.11 10.11 0.00 4.41
222 223 2.707849 CCTTGTCCATGGCTGCAGC 61.708 63.158 30.88 30.88 41.14 5.25
223 224 1.974875 CTTGTCCATGGCTGCAGCA 60.975 57.895 37.63 24.48 44.36 4.41
224 225 2.209064 CTTGTCCATGGCTGCAGCAC 62.209 60.000 37.63 26.71 44.36 4.40
225 226 3.446570 GTCCATGGCTGCAGCACC 61.447 66.667 37.63 22.97 44.36 5.01
226 227 3.969119 TCCATGGCTGCAGCACCA 61.969 61.111 37.63 27.67 44.36 4.17
227 228 3.449227 CCATGGCTGCAGCACCAG 61.449 66.667 37.63 23.45 44.36 4.00
228 229 3.449227 CATGGCTGCAGCACCAGG 61.449 66.667 37.63 25.20 44.36 4.45
229 230 4.753662 ATGGCTGCAGCACCAGGG 62.754 66.667 37.63 0.24 44.36 4.45
239 240 4.729918 CACCAGGGCCAGAGCACC 62.730 72.222 6.18 0.00 46.94 5.01
240 241 4.990910 ACCAGGGCCAGAGCACCT 62.991 66.667 6.18 0.00 46.94 4.00
241 242 3.655211 CCAGGGCCAGAGCACCTT 61.655 66.667 6.18 0.00 46.94 3.50
242 243 2.360852 CAGGGCCAGAGCACCTTG 60.361 66.667 6.18 0.00 46.94 3.61
243 244 4.357279 AGGGCCAGAGCACCTTGC 62.357 66.667 6.18 0.00 46.94 4.01
252 253 2.579201 GCACCTTGCTCTAGCCGA 59.421 61.111 0.00 0.00 40.96 5.54
253 254 1.079127 GCACCTTGCTCTAGCCGAA 60.079 57.895 0.00 0.00 40.96 4.30
254 255 1.086634 GCACCTTGCTCTAGCCGAAG 61.087 60.000 0.00 0.00 40.96 3.79
255 256 1.086634 CACCTTGCTCTAGCCGAAGC 61.087 60.000 0.00 0.00 41.18 3.86
256 257 1.219124 CCTTGCTCTAGCCGAAGCA 59.781 57.895 0.00 0.00 43.56 3.91
257 258 0.809241 CCTTGCTCTAGCCGAAGCAG 60.809 60.000 4.27 0.64 43.56 4.24
258 259 0.108424 CTTGCTCTAGCCGAAGCAGT 60.108 55.000 4.27 0.00 43.56 4.40
259 260 0.390340 TTGCTCTAGCCGAAGCAGTG 60.390 55.000 4.27 0.00 43.56 3.66
260 261 1.216710 GCTCTAGCCGAAGCAGTGT 59.783 57.895 0.00 0.00 43.56 3.55
261 262 0.390472 GCTCTAGCCGAAGCAGTGTT 60.390 55.000 0.00 0.00 43.56 3.32
262 263 1.354040 CTCTAGCCGAAGCAGTGTTG 58.646 55.000 0.00 0.00 43.56 3.33
263 264 0.679505 TCTAGCCGAAGCAGTGTTGT 59.320 50.000 0.00 0.00 43.56 3.32
264 265 0.792640 CTAGCCGAAGCAGTGTTGTG 59.207 55.000 0.00 0.00 43.56 3.33
265 266 0.602638 TAGCCGAAGCAGTGTTGTGG 60.603 55.000 0.00 0.00 43.56 4.17
266 267 2.908073 GCCGAAGCAGTGTTGTGGG 61.908 63.158 0.00 0.00 39.53 4.61
267 268 2.639286 CGAAGCAGTGTTGTGGGC 59.361 61.111 0.00 0.00 0.00 5.36
268 269 2.639286 GAAGCAGTGTTGTGGGCG 59.361 61.111 0.00 0.00 0.00 6.13
269 270 3.542629 GAAGCAGTGTTGTGGGCGC 62.543 63.158 0.00 0.00 0.00 6.53
297 298 2.119886 GGACCTGTCCTCGATCTGG 58.880 63.158 9.11 0.00 46.16 3.86
298 299 1.395826 GGACCTGTCCTCGATCTGGG 61.396 65.000 9.11 0.00 46.16 4.45
299 300 1.381872 ACCTGTCCTCGATCTGGGG 60.382 63.158 10.96 0.00 0.00 4.96
300 301 2.801631 CCTGTCCTCGATCTGGGGC 61.802 68.421 0.00 0.00 0.00 5.80
301 302 3.144120 CTGTCCTCGATCTGGGGCG 62.144 68.421 0.00 0.00 0.00 6.13
302 303 2.833582 GTCCTCGATCTGGGGCGA 60.834 66.667 0.00 0.00 35.01 5.54
306 307 4.137615 TCGATCTGGGGCGAGGGA 62.138 66.667 0.00 0.00 32.13 4.20
307 308 3.610669 CGATCTGGGGCGAGGGAG 61.611 72.222 0.00 0.00 0.00 4.30
308 309 2.123251 GATCTGGGGCGAGGGAGA 60.123 66.667 0.00 0.00 0.00 3.71
309 310 2.123077 ATCTGGGGCGAGGGAGAG 60.123 66.667 0.00 0.00 0.00 3.20
310 311 3.765257 ATCTGGGGCGAGGGAGAGG 62.765 68.421 0.00 0.00 0.00 3.69
314 315 4.798682 GGGCGAGGGAGAGGGGAA 62.799 72.222 0.00 0.00 0.00 3.97
315 316 3.157949 GGCGAGGGAGAGGGGAAG 61.158 72.222 0.00 0.00 0.00 3.46
316 317 3.157949 GCGAGGGAGAGGGGAAGG 61.158 72.222 0.00 0.00 0.00 3.46
317 318 2.690452 CGAGGGAGAGGGGAAGGA 59.310 66.667 0.00 0.00 0.00 3.36
318 319 1.456705 CGAGGGAGAGGGGAAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
319 320 1.074850 GAGGGAGAGGGGAAGGAGG 60.075 68.421 0.00 0.00 0.00 4.30
320 321 1.869452 AGGGAGAGGGGAAGGAGGT 60.869 63.158 0.00 0.00 0.00 3.85
321 322 1.083141 GGGAGAGGGGAAGGAGGTT 59.917 63.158 0.00 0.00 0.00 3.50
322 323 1.275421 GGGAGAGGGGAAGGAGGTTG 61.275 65.000 0.00 0.00 0.00 3.77
323 324 0.252742 GGAGAGGGGAAGGAGGTTGA 60.253 60.000 0.00 0.00 0.00 3.18
324 325 1.626631 GGAGAGGGGAAGGAGGTTGAT 60.627 57.143 0.00 0.00 0.00 2.57
325 326 1.488393 GAGAGGGGAAGGAGGTTGATG 59.512 57.143 0.00 0.00 0.00 3.07
326 327 1.081174 AGAGGGGAAGGAGGTTGATGA 59.919 52.381 0.00 0.00 0.00 2.92
327 328 2.131023 GAGGGGAAGGAGGTTGATGAT 58.869 52.381 0.00 0.00 0.00 2.45
328 329 1.849039 AGGGGAAGGAGGTTGATGATG 59.151 52.381 0.00 0.00 0.00 3.07
329 330 1.846439 GGGGAAGGAGGTTGATGATGA 59.154 52.381 0.00 0.00 0.00 2.92
330 331 2.158696 GGGGAAGGAGGTTGATGATGAG 60.159 54.545 0.00 0.00 0.00 2.90
331 332 2.158696 GGGAAGGAGGTTGATGATGAGG 60.159 54.545 0.00 0.00 0.00 3.86
332 333 2.774234 GGAAGGAGGTTGATGATGAGGA 59.226 50.000 0.00 0.00 0.00 3.71
333 334 3.181456 GGAAGGAGGTTGATGATGAGGAG 60.181 52.174 0.00 0.00 0.00 3.69
334 335 2.406559 AGGAGGTTGATGATGAGGAGG 58.593 52.381 0.00 0.00 0.00 4.30
335 336 2.022625 AGGAGGTTGATGATGAGGAGGA 60.023 50.000 0.00 0.00 0.00 3.71
336 337 2.368221 GGAGGTTGATGATGAGGAGGAG 59.632 54.545 0.00 0.00 0.00 3.69
337 338 3.303938 GAGGTTGATGATGAGGAGGAGA 58.696 50.000 0.00 0.00 0.00 3.71
338 339 3.708631 GAGGTTGATGATGAGGAGGAGAA 59.291 47.826 0.00 0.00 0.00 2.87
339 340 3.710677 AGGTTGATGATGAGGAGGAGAAG 59.289 47.826 0.00 0.00 0.00 2.85
340 341 3.181456 GGTTGATGATGAGGAGGAGAAGG 60.181 52.174 0.00 0.00 0.00 3.46
341 342 3.411454 TGATGATGAGGAGGAGAAGGT 57.589 47.619 0.00 0.00 0.00 3.50
342 343 4.542906 TGATGATGAGGAGGAGAAGGTA 57.457 45.455 0.00 0.00 0.00 3.08
343 344 4.883759 TGATGATGAGGAGGAGAAGGTAA 58.116 43.478 0.00 0.00 0.00 2.85
344 345 4.898265 TGATGATGAGGAGGAGAAGGTAAG 59.102 45.833 0.00 0.00 0.00 2.34
345 346 3.647636 TGATGAGGAGGAGAAGGTAAGG 58.352 50.000 0.00 0.00 0.00 2.69
346 347 2.552093 TGAGGAGGAGAAGGTAAGGG 57.448 55.000 0.00 0.00 0.00 3.95
347 348 1.008449 TGAGGAGGAGAAGGTAAGGGG 59.992 57.143 0.00 0.00 0.00 4.79
348 349 1.291335 GAGGAGGAGAAGGTAAGGGGA 59.709 57.143 0.00 0.00 0.00 4.81
349 350 1.948243 AGGAGGAGAAGGTAAGGGGAT 59.052 52.381 0.00 0.00 0.00 3.85
350 351 2.050918 GGAGGAGAAGGTAAGGGGATG 58.949 57.143 0.00 0.00 0.00 3.51
351 352 2.360423 GGAGGAGAAGGTAAGGGGATGA 60.360 54.545 0.00 0.00 0.00 2.92
352 353 2.969262 GAGGAGAAGGTAAGGGGATGAG 59.031 54.545 0.00 0.00 0.00 2.90
353 354 2.592512 AGGAGAAGGTAAGGGGATGAGA 59.407 50.000 0.00 0.00 0.00 3.27
354 355 2.969262 GGAGAAGGTAAGGGGATGAGAG 59.031 54.545 0.00 0.00 0.00 3.20
355 356 3.374318 GGAGAAGGTAAGGGGATGAGAGA 60.374 52.174 0.00 0.00 0.00 3.10
356 357 4.290942 GAGAAGGTAAGGGGATGAGAGAA 58.709 47.826 0.00 0.00 0.00 2.87
357 358 4.294347 AGAAGGTAAGGGGATGAGAGAAG 58.706 47.826 0.00 0.00 0.00 2.85
358 359 3.053359 AGGTAAGGGGATGAGAGAAGG 57.947 52.381 0.00 0.00 0.00 3.46
359 360 2.050918 GGTAAGGGGATGAGAGAAGGG 58.949 57.143 0.00 0.00 0.00 3.95
360 361 2.050918 GTAAGGGGATGAGAGAAGGGG 58.949 57.143 0.00 0.00 0.00 4.79
361 362 0.327964 AAGGGGATGAGAGAAGGGGG 60.328 60.000 0.00 0.00 0.00 5.40
362 363 1.004891 GGGGATGAGAGAAGGGGGT 59.995 63.158 0.00 0.00 0.00 4.95
363 364 1.348775 GGGGATGAGAGAAGGGGGTG 61.349 65.000 0.00 0.00 0.00 4.61
364 365 1.348775 GGGATGAGAGAAGGGGGTGG 61.349 65.000 0.00 0.00 0.00 4.61
365 366 0.326618 GGATGAGAGAAGGGGGTGGA 60.327 60.000 0.00 0.00 0.00 4.02
366 367 1.127343 GATGAGAGAAGGGGGTGGAG 58.873 60.000 0.00 0.00 0.00 3.86
367 368 0.327000 ATGAGAGAAGGGGGTGGAGG 60.327 60.000 0.00 0.00 0.00 4.30
368 369 2.285743 AGAGAAGGGGGTGGAGGC 60.286 66.667 0.00 0.00 0.00 4.70
369 370 3.787001 GAGAAGGGGGTGGAGGCG 61.787 72.222 0.00 0.00 0.00 5.52
370 371 4.658786 AGAAGGGGGTGGAGGCGT 62.659 66.667 0.00 0.00 0.00 5.68
371 372 4.097361 GAAGGGGGTGGAGGCGTC 62.097 72.222 0.00 0.00 0.00 5.19
372 373 4.974438 AAGGGGGTGGAGGCGTCA 62.974 66.667 8.91 0.00 0.00 4.35
393 394 3.246880 GTGGGGGAGGTCACCGTT 61.247 66.667 0.00 0.00 41.47 4.44
394 395 3.246112 TGGGGGAGGTCACCGTTG 61.246 66.667 0.00 0.00 41.47 4.10
395 396 4.029809 GGGGGAGGTCACCGTTGG 62.030 72.222 0.00 0.00 41.47 3.77
396 397 4.717313 GGGGAGGTCACCGTTGGC 62.717 72.222 0.00 0.00 0.00 4.52
425 426 3.839432 CGGCCGAGGGAGAGGAAC 61.839 72.222 24.07 0.00 0.00 3.62
426 427 3.839432 GGCCGAGGGAGAGGAACG 61.839 72.222 0.00 0.00 0.00 3.95
427 428 3.839432 GCCGAGGGAGAGGAACGG 61.839 72.222 0.00 0.00 45.26 4.44
428 429 3.148279 CCGAGGGAGAGGAACGGG 61.148 72.222 0.00 0.00 39.92 5.28
429 430 3.839432 CGAGGGAGAGGAACGGGC 61.839 72.222 0.00 0.00 0.00 6.13
430 431 3.839432 GAGGGAGAGGAACGGGCG 61.839 72.222 0.00 0.00 0.00 6.13
433 434 3.155167 GGAGAGGAACGGGCGGAT 61.155 66.667 0.00 0.00 0.00 4.18
434 435 2.107141 GAGAGGAACGGGCGGATG 59.893 66.667 0.00 0.00 0.00 3.51
435 436 3.447025 GAGAGGAACGGGCGGATGG 62.447 68.421 0.00 0.00 0.00 3.51
436 437 4.547367 GAGGAACGGGCGGATGGG 62.547 72.222 0.00 0.00 0.00 4.00
439 440 4.104183 GAACGGGCGGATGGGGAA 62.104 66.667 0.00 0.00 0.00 3.97
440 441 4.419921 AACGGGCGGATGGGGAAC 62.420 66.667 0.00 0.00 0.00 3.62
447 448 4.506255 GGATGGGGAACGGGGCTG 62.506 72.222 0.00 0.00 0.00 4.85
448 449 4.506255 GATGGGGAACGGGGCTGG 62.506 72.222 0.00 0.00 0.00 4.85
453 454 4.759205 GGAACGGGGCTGGCCAAT 62.759 66.667 22.68 6.11 37.98 3.16
454 455 3.140814 GAACGGGGCTGGCCAATC 61.141 66.667 22.68 12.37 37.98 2.67
455 456 3.645268 GAACGGGGCTGGCCAATCT 62.645 63.158 22.68 2.77 37.98 2.40
456 457 3.645268 AACGGGGCTGGCCAATCTC 62.645 63.158 22.68 0.53 37.98 2.75
457 458 3.801997 CGGGGCTGGCCAATCTCT 61.802 66.667 22.68 0.00 37.98 3.10
458 459 2.194326 GGGGCTGGCCAATCTCTC 59.806 66.667 22.68 0.00 37.98 3.20
459 460 2.381941 GGGGCTGGCCAATCTCTCT 61.382 63.158 22.68 0.00 37.98 3.10
460 461 1.611965 GGGCTGGCCAATCTCTCTT 59.388 57.895 16.34 0.00 37.98 2.85
461 462 0.033699 GGGCTGGCCAATCTCTCTTT 60.034 55.000 16.34 0.00 37.98 2.52
462 463 1.387539 GGCTGGCCAATCTCTCTTTC 58.612 55.000 7.01 0.00 35.81 2.62
463 464 1.064832 GGCTGGCCAATCTCTCTTTCT 60.065 52.381 7.01 0.00 35.81 2.52
464 465 2.620108 GGCTGGCCAATCTCTCTTTCTT 60.620 50.000 7.01 0.00 35.81 2.52
465 466 2.682352 GCTGGCCAATCTCTCTTTCTTC 59.318 50.000 7.01 0.00 0.00 2.87
466 467 3.621958 GCTGGCCAATCTCTCTTTCTTCT 60.622 47.826 7.01 0.00 0.00 2.85
467 468 3.940221 CTGGCCAATCTCTCTTTCTTCTG 59.060 47.826 7.01 0.00 0.00 3.02
468 469 2.682352 GGCCAATCTCTCTTTCTTCTGC 59.318 50.000 0.00 0.00 0.00 4.26
469 470 3.341823 GCCAATCTCTCTTTCTTCTGCA 58.658 45.455 0.00 0.00 0.00 4.41
470 471 3.755378 GCCAATCTCTCTTTCTTCTGCAA 59.245 43.478 0.00 0.00 0.00 4.08
471 472 4.142643 GCCAATCTCTCTTTCTTCTGCAAG 60.143 45.833 0.00 0.00 0.00 4.01
472 473 5.243981 CCAATCTCTCTTTCTTCTGCAAGA 58.756 41.667 0.00 0.00 44.68 3.02
483 484 2.730183 TCTGCAAGAAACGAACAACG 57.270 45.000 0.00 0.00 42.31 4.10
492 493 2.551270 CGAACAACGTGGAGCAGC 59.449 61.111 0.00 0.00 37.22 5.25
493 494 2.946762 GAACAACGTGGAGCAGCC 59.053 61.111 0.00 0.00 37.10 4.85
494 495 1.891919 GAACAACGTGGAGCAGCCA 60.892 57.895 0.00 0.00 46.96 4.75
501 502 4.085876 TGGAGCAGCCAAGAAAGC 57.914 55.556 0.00 0.00 45.87 3.51
502 503 1.151221 TGGAGCAGCCAAGAAAGCA 59.849 52.632 0.00 0.00 45.87 3.91
503 504 0.467844 TGGAGCAGCCAAGAAAGCAA 60.468 50.000 0.00 0.00 45.87 3.91
504 505 0.675633 GGAGCAGCCAAGAAAGCAAA 59.324 50.000 0.00 0.00 36.34 3.68
505 506 1.603931 GGAGCAGCCAAGAAAGCAAAC 60.604 52.381 0.00 0.00 36.34 2.93
506 507 1.339291 GAGCAGCCAAGAAAGCAAACT 59.661 47.619 0.00 0.00 0.00 2.66
507 508 1.068127 AGCAGCCAAGAAAGCAAACTG 59.932 47.619 0.00 0.00 0.00 3.16
508 509 1.494824 CAGCCAAGAAAGCAAACTGC 58.505 50.000 0.00 0.00 45.46 4.40
509 510 0.390492 AGCCAAGAAAGCAAACTGCC 59.610 50.000 0.00 0.00 46.52 4.85
510 511 0.940991 GCCAAGAAAGCAAACTGCCG 60.941 55.000 0.00 0.00 46.52 5.69
511 512 0.667993 CCAAGAAAGCAAACTGCCGA 59.332 50.000 0.00 0.00 46.52 5.54
512 513 1.270550 CCAAGAAAGCAAACTGCCGAT 59.729 47.619 0.00 0.00 46.52 4.18
513 514 2.589014 CAAGAAAGCAAACTGCCGATC 58.411 47.619 0.00 0.00 46.52 3.69
514 515 1.168714 AGAAAGCAAACTGCCGATCC 58.831 50.000 0.00 0.00 46.52 3.36
515 516 0.171231 GAAAGCAAACTGCCGATCCC 59.829 55.000 0.00 0.00 46.52 3.85
516 517 0.251341 AAAGCAAACTGCCGATCCCT 60.251 50.000 0.00 0.00 46.52 4.20
517 518 0.251341 AAGCAAACTGCCGATCCCTT 60.251 50.000 0.00 0.00 46.52 3.95
518 519 0.251341 AGCAAACTGCCGATCCCTTT 60.251 50.000 0.00 0.00 46.52 3.11
519 520 0.603065 GCAAACTGCCGATCCCTTTT 59.397 50.000 0.00 0.00 37.42 2.27
520 521 1.669795 GCAAACTGCCGATCCCTTTTG 60.670 52.381 0.00 0.00 37.42 2.44
521 522 1.613437 CAAACTGCCGATCCCTTTTGT 59.387 47.619 0.00 0.00 0.00 2.83
522 523 1.247567 AACTGCCGATCCCTTTTGTG 58.752 50.000 0.00 0.00 0.00 3.33
523 524 0.110486 ACTGCCGATCCCTTTTGTGT 59.890 50.000 0.00 0.00 0.00 3.72
524 525 0.804989 CTGCCGATCCCTTTTGTGTC 59.195 55.000 0.00 0.00 0.00 3.67
525 526 0.953471 TGCCGATCCCTTTTGTGTCG 60.953 55.000 0.00 0.00 0.00 4.35
526 527 0.953960 GCCGATCCCTTTTGTGTCGT 60.954 55.000 0.00 0.00 0.00 4.34
527 528 1.673626 GCCGATCCCTTTTGTGTCGTA 60.674 52.381 0.00 0.00 0.00 3.43
528 529 1.997606 CCGATCCCTTTTGTGTCGTAC 59.002 52.381 0.00 0.00 0.00 3.67
529 530 1.997606 CGATCCCTTTTGTGTCGTACC 59.002 52.381 0.00 0.00 0.00 3.34
530 531 2.353406 CGATCCCTTTTGTGTCGTACCT 60.353 50.000 0.00 0.00 0.00 3.08
531 532 3.119388 CGATCCCTTTTGTGTCGTACCTA 60.119 47.826 0.00 0.00 0.00 3.08
532 533 4.618927 CGATCCCTTTTGTGTCGTACCTAA 60.619 45.833 0.00 0.00 0.00 2.69
533 534 4.895668 TCCCTTTTGTGTCGTACCTAAT 57.104 40.909 0.00 0.00 0.00 1.73
534 535 5.999205 TCCCTTTTGTGTCGTACCTAATA 57.001 39.130 0.00 0.00 0.00 0.98
535 536 5.723295 TCCCTTTTGTGTCGTACCTAATAC 58.277 41.667 0.00 0.00 0.00 1.89
547 548 3.521947 ACCTAATACGACTTGGACTGC 57.478 47.619 0.00 0.00 0.00 4.40
548 549 2.159282 ACCTAATACGACTTGGACTGCG 60.159 50.000 0.00 0.00 0.00 5.18
549 550 2.098607 CCTAATACGACTTGGACTGCGA 59.901 50.000 0.00 0.00 0.00 5.10
550 551 2.279582 AATACGACTTGGACTGCGAG 57.720 50.000 0.00 0.00 0.00 5.03
551 552 1.460504 ATACGACTTGGACTGCGAGA 58.539 50.000 0.00 0.00 0.00 4.04
552 553 0.803117 TACGACTTGGACTGCGAGAG 59.197 55.000 0.00 0.00 0.00 3.20
553 554 0.889638 ACGACTTGGACTGCGAGAGA 60.890 55.000 0.00 0.00 0.00 3.10
554 555 0.455295 CGACTTGGACTGCGAGAGAC 60.455 60.000 0.00 0.00 0.00 3.36
555 556 0.598562 GACTTGGACTGCGAGAGACA 59.401 55.000 0.00 0.00 0.00 3.41
556 557 1.000163 GACTTGGACTGCGAGAGACAA 60.000 52.381 0.00 0.00 0.00 3.18
557 558 1.412710 ACTTGGACTGCGAGAGACAAA 59.587 47.619 0.00 0.00 0.00 2.83
558 559 2.158957 ACTTGGACTGCGAGAGACAAAA 60.159 45.455 0.00 0.00 0.00 2.44
559 560 2.839486 TGGACTGCGAGAGACAAAAT 57.161 45.000 0.00 0.00 0.00 1.82
560 561 2.416747 TGGACTGCGAGAGACAAAATG 58.583 47.619 0.00 0.00 0.00 2.32
561 562 1.129437 GGACTGCGAGAGACAAAATGC 59.871 52.381 0.00 0.00 0.00 3.56
562 563 1.129437 GACTGCGAGAGACAAAATGCC 59.871 52.381 0.00 0.00 0.00 4.40
563 564 0.449388 CTGCGAGAGACAAAATGCCC 59.551 55.000 0.00 0.00 0.00 5.36
564 565 0.036732 TGCGAGAGACAAAATGCCCT 59.963 50.000 0.00 0.00 0.00 5.19
565 566 0.449388 GCGAGAGACAAAATGCCCTG 59.551 55.000 0.00 0.00 0.00 4.45
566 567 0.449388 CGAGAGACAAAATGCCCTGC 59.551 55.000 0.00 0.00 0.00 4.85
567 568 1.831580 GAGAGACAAAATGCCCTGCT 58.168 50.000 0.00 0.00 0.00 4.24
568 569 2.677902 CGAGAGACAAAATGCCCTGCTA 60.678 50.000 0.00 0.00 0.00 3.49
569 570 2.680339 GAGAGACAAAATGCCCTGCTAC 59.320 50.000 0.00 0.00 0.00 3.58
570 571 2.040278 AGAGACAAAATGCCCTGCTACA 59.960 45.455 0.00 0.00 0.00 2.74
571 572 3.019564 GAGACAAAATGCCCTGCTACAT 58.980 45.455 0.00 0.00 0.00 2.29
572 573 3.019564 AGACAAAATGCCCTGCTACATC 58.980 45.455 0.00 0.00 0.00 3.06
573 574 2.099756 GACAAAATGCCCTGCTACATCC 59.900 50.000 0.00 0.00 0.00 3.51
574 575 2.101783 CAAAATGCCCTGCTACATCCA 58.898 47.619 0.00 0.00 0.00 3.41
575 576 2.496871 CAAAATGCCCTGCTACATCCAA 59.503 45.455 0.00 0.00 0.00 3.53
576 577 2.761786 AATGCCCTGCTACATCCAAT 57.238 45.000 0.00 0.00 0.00 3.16
577 578 2.761786 ATGCCCTGCTACATCCAATT 57.238 45.000 0.00 0.00 0.00 2.32
578 579 1.766494 TGCCCTGCTACATCCAATTG 58.234 50.000 0.00 0.00 0.00 2.32
579 580 1.284491 TGCCCTGCTACATCCAATTGA 59.716 47.619 7.12 0.00 0.00 2.57
580 581 1.678101 GCCCTGCTACATCCAATTGAC 59.322 52.381 7.12 0.00 0.00 3.18
581 582 2.301346 CCCTGCTACATCCAATTGACC 58.699 52.381 7.12 0.00 0.00 4.02
582 583 2.357050 CCCTGCTACATCCAATTGACCA 60.357 50.000 7.12 0.00 0.00 4.02
583 584 2.947652 CCTGCTACATCCAATTGACCAG 59.052 50.000 7.12 2.64 0.00 4.00
584 585 2.357009 CTGCTACATCCAATTGACCAGC 59.643 50.000 7.12 8.50 0.00 4.85
585 586 1.331756 GCTACATCCAATTGACCAGCG 59.668 52.381 7.12 0.00 0.00 5.18
586 587 1.331756 CTACATCCAATTGACCAGCGC 59.668 52.381 7.12 0.00 0.00 5.92
587 588 0.608856 ACATCCAATTGACCAGCGCA 60.609 50.000 11.47 0.00 0.00 6.09
588 589 0.527113 CATCCAATTGACCAGCGCAA 59.473 50.000 11.47 0.00 0.00 4.85
589 590 1.067706 CATCCAATTGACCAGCGCAAA 60.068 47.619 11.47 0.00 0.00 3.68
590 591 0.597568 TCCAATTGACCAGCGCAAAG 59.402 50.000 11.47 0.00 0.00 2.77
591 592 0.314935 CCAATTGACCAGCGCAAAGT 59.685 50.000 11.47 2.77 0.00 2.66
592 593 1.269726 CCAATTGACCAGCGCAAAGTT 60.270 47.619 11.47 0.00 0.00 2.66
593 594 2.053627 CAATTGACCAGCGCAAAGTTC 58.946 47.619 11.47 0.00 0.00 3.01
594 595 1.609208 ATTGACCAGCGCAAAGTTCT 58.391 45.000 11.47 0.00 0.00 3.01
595 596 0.944386 TTGACCAGCGCAAAGTTCTC 59.056 50.000 11.47 0.00 0.00 2.87
596 597 0.106708 TGACCAGCGCAAAGTTCTCT 59.893 50.000 11.47 0.00 0.00 3.10
597 598 1.230324 GACCAGCGCAAAGTTCTCTT 58.770 50.000 11.47 0.00 35.14 2.85
598 599 0.947244 ACCAGCGCAAAGTTCTCTTG 59.053 50.000 11.47 0.00 33.79 3.02
599 600 0.386478 CCAGCGCAAAGTTCTCTTGC 60.386 55.000 11.47 0.00 33.79 4.01
600 601 0.386478 CAGCGCAAAGTTCTCTTGCC 60.386 55.000 11.47 0.00 33.79 4.52
601 602 0.819259 AGCGCAAAGTTCTCTTGCCA 60.819 50.000 11.47 0.00 33.79 4.92
602 603 0.242017 GCGCAAAGTTCTCTTGCCAT 59.758 50.000 0.30 0.00 33.79 4.40
603 604 1.336240 GCGCAAAGTTCTCTTGCCATT 60.336 47.619 0.30 0.00 33.79 3.16
604 605 2.322161 CGCAAAGTTCTCTTGCCATTG 58.678 47.619 2.21 0.00 33.79 2.82
605 606 2.680577 GCAAAGTTCTCTTGCCATTGG 58.319 47.619 0.00 0.00 33.79 3.16
616 617 3.367678 GCCATTGGCTGCCATTTAC 57.632 52.632 24.03 9.30 46.69 2.01
617 618 0.536260 GCCATTGGCTGCCATTTACA 59.464 50.000 24.03 7.42 46.69 2.41
618 619 1.472026 GCCATTGGCTGCCATTTACAG 60.472 52.381 24.03 9.48 46.69 2.74
619 620 1.826720 CCATTGGCTGCCATTTACAGT 59.173 47.619 24.03 0.07 37.47 3.55
620 621 3.023119 CCATTGGCTGCCATTTACAGTA 58.977 45.455 24.03 4.87 37.47 2.74
621 622 3.067180 CCATTGGCTGCCATTTACAGTAG 59.933 47.826 24.03 5.12 37.47 2.57
622 623 3.712016 TTGGCTGCCATTTACAGTAGA 57.288 42.857 24.03 0.00 37.47 2.59
623 624 2.985896 TGGCTGCCATTTACAGTAGAC 58.014 47.619 19.30 0.00 37.47 2.59
624 625 1.933853 GGCTGCCATTTACAGTAGACG 59.066 52.381 15.17 0.00 37.47 4.18
625 626 2.618053 GCTGCCATTTACAGTAGACGT 58.382 47.619 0.00 0.00 37.47 4.34
626 627 2.603560 GCTGCCATTTACAGTAGACGTC 59.396 50.000 7.70 7.70 37.47 4.34
627 628 3.187700 CTGCCATTTACAGTAGACGTCC 58.812 50.000 13.01 0.00 0.00 4.79
628 629 2.190981 GCCATTTACAGTAGACGTCCG 58.809 52.381 13.01 0.86 0.00 4.79
629 630 2.190981 CCATTTACAGTAGACGTCCGC 58.809 52.381 13.01 5.33 0.00 5.54
630 631 2.159282 CCATTTACAGTAGACGTCCGCT 60.159 50.000 13.01 7.84 0.00 5.52
631 632 2.624316 TTTACAGTAGACGTCCGCTG 57.376 50.000 25.79 25.79 35.31 5.18
632 633 1.812235 TTACAGTAGACGTCCGCTGA 58.188 50.000 30.95 18.01 33.57 4.26
633 634 1.081892 TACAGTAGACGTCCGCTGAC 58.918 55.000 30.95 15.63 38.18 3.51
642 643 2.805546 TCCGCTGACGTGGATAGC 59.194 61.111 0.00 0.00 44.63 2.97
643 644 2.049767 TCCGCTGACGTGGATAGCA 61.050 57.895 0.00 0.00 44.63 3.49
644 645 1.878522 CCGCTGACGTGGATAGCAC 60.879 63.158 0.00 0.00 43.70 4.40
650 651 2.961721 CGTGGATAGCACGCGCAT 60.962 61.111 5.73 0.00 42.27 4.73
651 652 2.525248 CGTGGATAGCACGCGCATT 61.525 57.895 5.73 0.00 42.27 3.56
652 653 1.276844 GTGGATAGCACGCGCATTC 59.723 57.895 5.73 0.00 42.27 2.67
653 654 1.153469 TGGATAGCACGCGCATTCA 60.153 52.632 5.73 0.00 42.27 2.57
654 655 1.276844 GGATAGCACGCGCATTCAC 59.723 57.895 5.73 0.00 42.27 3.18
655 656 1.276844 GATAGCACGCGCATTCACC 59.723 57.895 5.73 0.00 42.27 4.02
656 657 2.105960 GATAGCACGCGCATTCACCC 62.106 60.000 5.73 0.00 42.27 4.61
659 660 3.055719 CACGCGCATTCACCCCTT 61.056 61.111 5.73 0.00 0.00 3.95
660 661 2.746277 ACGCGCATTCACCCCTTC 60.746 61.111 5.73 0.00 0.00 3.46
661 662 3.508840 CGCGCATTCACCCCTTCC 61.509 66.667 8.75 0.00 0.00 3.46
662 663 3.508840 GCGCATTCACCCCTTCCG 61.509 66.667 0.30 0.00 0.00 4.30
663 664 3.508840 CGCATTCACCCCTTCCGC 61.509 66.667 0.00 0.00 0.00 5.54
664 665 3.508840 GCATTCACCCCTTCCGCG 61.509 66.667 0.00 0.00 0.00 6.46
665 666 2.046314 CATTCACCCCTTCCGCGT 60.046 61.111 4.92 0.00 0.00 6.01
666 667 1.219664 CATTCACCCCTTCCGCGTA 59.780 57.895 4.92 0.00 0.00 4.42
667 668 0.810031 CATTCACCCCTTCCGCGTAG 60.810 60.000 4.92 1.38 0.00 3.51
792 795 9.912634 AATGCCATCTATTCGGTTAATTAATTG 57.087 29.630 11.05 0.00 0.00 2.32
793 796 8.458573 TGCCATCTATTCGGTTAATTAATTGT 57.541 30.769 11.05 0.00 0.00 2.71
794 797 8.908903 TGCCATCTATTCGGTTAATTAATTGTT 58.091 29.630 11.05 0.00 0.00 2.83
930 933 1.689582 GGTAGGGTGAGGGTGAGGG 60.690 68.421 0.00 0.00 0.00 4.30
931 934 1.080538 GTAGGGTGAGGGTGAGGGT 59.919 63.158 0.00 0.00 0.00 4.34
996 1000 2.731976 CGAAGTTTTCAGGAACGAGGAG 59.268 50.000 0.00 0.00 34.74 3.69
1201 1205 1.812093 CCGCCGCCGTCTATGAAAA 60.812 57.895 0.00 0.00 0.00 2.29
1444 1462 4.375706 CGAAATAATACGCCGTTTCCTAGC 60.376 45.833 0.00 0.00 0.00 3.42
1493 3329 7.815068 ACAAATTTGCGTGCTTATTAATTACCA 59.185 29.630 18.12 0.00 0.00 3.25
1506 3342 3.340814 AATTACCACCACAGAGCAGAG 57.659 47.619 0.00 0.00 0.00 3.35
1509 3345 0.969894 ACCACCACAGAGCAGAGTAC 59.030 55.000 0.00 0.00 0.00 2.73
1510 3346 0.969149 CCACCACAGAGCAGAGTACA 59.031 55.000 0.00 0.00 0.00 2.90
1511 3347 1.552337 CCACCACAGAGCAGAGTACAT 59.448 52.381 0.00 0.00 0.00 2.29
1526 3365 3.473625 AGTACATTAATTGTAGCCGGCC 58.526 45.455 26.15 9.73 41.45 6.13
1688 3527 0.384353 GTGTCCGCTCGTTCTTTTGC 60.384 55.000 0.00 0.00 0.00 3.68
1733 3572 5.892568 ACCAGAAGTCGATGAACATAGTAC 58.107 41.667 0.00 0.00 0.00 2.73
1765 3604 1.701847 AGGTGGATGAACAAGCAGTCT 59.298 47.619 0.00 0.00 0.00 3.24
1842 3681 1.378762 GTACCAGGGCCTTCTGCAA 59.621 57.895 1.32 0.00 43.89 4.08
1923 3762 2.482142 CGGCAAGATGTACTCCCTCTTC 60.482 54.545 0.00 0.00 0.00 2.87
2003 3844 2.678336 CGCTGAGTAAAATTCCCCTGTC 59.322 50.000 0.00 0.00 0.00 3.51
2014 3855 9.197306 GTAAAATTCCCCTGTCCTGTTTATTAT 57.803 33.333 0.00 0.00 0.00 1.28
2015 3856 8.679344 AAAATTCCCCTGTCCTGTTTATTATT 57.321 30.769 0.00 0.00 0.00 1.40
2016 3857 7.898014 AATTCCCCTGTCCTGTTTATTATTC 57.102 36.000 0.00 0.00 0.00 1.75
2017 3858 5.382664 TCCCCTGTCCTGTTTATTATTCC 57.617 43.478 0.00 0.00 0.00 3.01
2018 3859 4.791334 TCCCCTGTCCTGTTTATTATTCCA 59.209 41.667 0.00 0.00 0.00 3.53
2019 3860 4.887655 CCCCTGTCCTGTTTATTATTCCAC 59.112 45.833 0.00 0.00 0.00 4.02
2117 3958 2.038557 ACGGTACAAGGAGCAAGACATT 59.961 45.455 0.00 0.00 0.00 2.71
2266 4107 2.987413 TGCGTTGTGATGTGATTTCC 57.013 45.000 0.00 0.00 0.00 3.13
2473 4323 7.657336 TCATCAGGTAAAGGAAATGTTTGTTC 58.343 34.615 0.00 0.00 0.00 3.18
2474 4324 6.067263 TCAGGTAAAGGAAATGTTTGTTCG 57.933 37.500 0.00 0.00 0.00 3.95
2484 4334 6.370718 AGGAAATGTTTGTTCGTACATAGGAC 59.629 38.462 0.00 0.00 34.04 3.85
2570 4421 0.250597 AGTTTACAGGCGGGTTCACC 60.251 55.000 0.00 0.00 0.00 4.02
2582 4433 0.246635 GGTTCACCGCTCAGAGCTTA 59.753 55.000 20.39 0.02 39.60 3.09
2655 4506 3.543460 GCGTGTACAGTGTCACAGTTTTC 60.543 47.826 19.21 0.00 34.66 2.29
2693 4548 1.065126 AGGGCTCTTCGATTCAAAGGG 60.065 52.381 0.00 0.00 0.00 3.95
2724 4579 4.281657 AGCATTTTGGAGGATTCTAACCC 58.718 43.478 0.00 0.00 0.00 4.11
2780 4635 9.002600 TGATTCGAAAGATTACAATCCATATGG 57.997 33.333 16.25 16.25 41.60 2.74
2870 4725 6.494893 TCCTATAGTTTTCATGTGCACAAC 57.505 37.500 25.72 16.94 0.00 3.32
2877 4732 5.752955 AGTTTTCATGTGCACAACCAAATAC 59.247 36.000 25.72 17.98 0.00 1.89
2879 4734 2.560542 TCATGTGCACAACCAAATACCC 59.439 45.455 25.72 0.00 0.00 3.69
2892 4747 5.892348 ACCAAATACCCTGAATTCTTGTCT 58.108 37.500 7.05 0.00 0.00 3.41
2904 4761 7.325660 TGAATTCTTGTCTTAATCAGGATGC 57.674 36.000 7.05 0.00 34.76 3.91
2957 4815 8.539770 TGTTTCTGTGTTTTAAAATTTCTGCA 57.460 26.923 3.52 0.00 0.00 4.41
3095 4987 4.277174 TGTTCAATTGGTGTGTGTATGTCC 59.723 41.667 5.42 0.00 0.00 4.02
3217 5118 3.800685 CTGGCACACGTCGTTCCCA 62.801 63.158 0.00 1.60 28.11 4.37
3285 5190 6.008960 GCAATTCTATCTTCCCATCCATCTT 58.991 40.000 0.00 0.00 0.00 2.40
3293 5198 2.249535 CCATCCATCTTGCGGCTCG 61.250 63.158 0.00 0.00 0.00 5.03
3329 5234 4.699522 GGGAAGCTCGTTGCCGGT 62.700 66.667 1.90 0.00 44.23 5.28
3376 5281 2.572284 GCCAAGCGTCCTACTCGT 59.428 61.111 0.00 0.00 0.00 4.18
3506 5411 4.086178 CGTGCTCGTCGTCCTCGT 62.086 66.667 0.00 0.00 38.33 4.18
3507 5412 2.202324 GTGCTCGTCGTCCTCGTC 60.202 66.667 0.00 0.00 38.33 4.20
3508 5413 3.785499 TGCTCGTCGTCCTCGTCG 61.785 66.667 0.00 1.62 46.06 5.12
3509 5414 3.786586 GCTCGTCGTCCTCGTCGT 61.787 66.667 7.05 0.00 45.27 4.34
3510 5415 2.394912 CTCGTCGTCCTCGTCGTC 59.605 66.667 7.05 0.00 45.27 4.20
3511 5416 3.081159 CTCGTCGTCCTCGTCGTCC 62.081 68.421 7.05 0.00 45.27 4.79
3512 5417 3.117171 CGTCGTCCTCGTCGTCCT 61.117 66.667 0.00 0.00 41.73 3.85
3513 5418 2.783935 GTCGTCCTCGTCGTCCTC 59.216 66.667 0.00 0.00 38.33 3.71
3514 5419 2.812609 TCGTCCTCGTCGTCCTCG 60.813 66.667 0.00 0.00 38.33 4.63
3622 5527 4.273257 TCACGGTGTTCGCGCTGA 62.273 61.111 5.56 1.08 43.89 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.232188 AGATACCGACCTCTACAAGTCA 57.768 45.455 0.00 0.00 33.08 3.41
1 2 4.260702 CGAAGATACCGACCTCTACAAGTC 60.261 50.000 0.00 0.00 0.00 3.01
2 3 3.626670 CGAAGATACCGACCTCTACAAGT 59.373 47.826 0.00 0.00 0.00 3.16
3 4 3.626670 ACGAAGATACCGACCTCTACAAG 59.373 47.826 0.00 0.00 0.00 3.16
4 5 3.614092 ACGAAGATACCGACCTCTACAA 58.386 45.455 0.00 0.00 0.00 2.41
5 6 3.272574 ACGAAGATACCGACCTCTACA 57.727 47.619 0.00 0.00 0.00 2.74
6 7 4.447389 GTCTACGAAGATACCGACCTCTAC 59.553 50.000 0.00 0.00 33.30 2.59
7 8 4.626042 GTCTACGAAGATACCGACCTCTA 58.374 47.826 0.00 0.00 33.30 2.43
8 9 3.465871 GTCTACGAAGATACCGACCTCT 58.534 50.000 0.00 0.00 33.30 3.69
9 10 2.220593 CGTCTACGAAGATACCGACCTC 59.779 54.545 0.00 0.00 43.02 3.85
10 11 2.208431 CGTCTACGAAGATACCGACCT 58.792 52.381 0.00 0.00 43.02 3.85
11 12 1.262683 CCGTCTACGAAGATACCGACC 59.737 57.143 3.65 0.00 43.02 4.79
12 13 1.936547 ACCGTCTACGAAGATACCGAC 59.063 52.381 3.65 0.00 43.02 4.79
13 14 1.935873 CACCGTCTACGAAGATACCGA 59.064 52.381 3.65 0.00 43.02 4.69
14 15 1.935873 TCACCGTCTACGAAGATACCG 59.064 52.381 3.65 0.00 43.02 4.02
15 16 3.562973 TCATCACCGTCTACGAAGATACC 59.437 47.826 3.65 0.00 43.02 2.73
16 17 4.525686 GTCATCACCGTCTACGAAGATAC 58.474 47.826 3.65 3.64 43.02 2.24
17 18 3.562973 GGTCATCACCGTCTACGAAGATA 59.437 47.826 3.65 0.00 43.02 1.98
18 19 2.358267 GGTCATCACCGTCTACGAAGAT 59.642 50.000 3.65 4.19 43.02 2.40
19 20 1.741706 GGTCATCACCGTCTACGAAGA 59.258 52.381 3.65 1.89 43.02 2.87
20 21 2.190325 GGTCATCACCGTCTACGAAG 57.810 55.000 3.65 0.00 43.02 3.79
30 31 0.108138 CCGTTGAGGAGGTCATCACC 60.108 60.000 0.00 0.00 45.00 4.02
31 32 0.895530 TCCGTTGAGGAGGTCATCAC 59.104 55.000 0.00 0.00 45.98 3.06
32 33 3.374318 TCCGTTGAGGAGGTCATCA 57.626 52.632 0.00 0.00 45.98 3.07
41 42 0.970937 TCCCTGCTACTCCGTTGAGG 60.971 60.000 0.00 0.00 43.29 3.86
42 43 0.895530 TTCCCTGCTACTCCGTTGAG 59.104 55.000 0.00 0.00 44.62 3.02
43 44 1.344065 TTTCCCTGCTACTCCGTTGA 58.656 50.000 0.00 0.00 0.00 3.18
44 45 2.178912 TTTTCCCTGCTACTCCGTTG 57.821 50.000 0.00 0.00 0.00 4.10
45 46 2.943036 TTTTTCCCTGCTACTCCGTT 57.057 45.000 0.00 0.00 0.00 4.44
46 47 2.618045 CCATTTTTCCCTGCTACTCCGT 60.618 50.000 0.00 0.00 0.00 4.69
47 48 2.017049 CCATTTTTCCCTGCTACTCCG 58.983 52.381 0.00 0.00 0.00 4.63
48 49 3.017442 GTCCATTTTTCCCTGCTACTCC 58.983 50.000 0.00 0.00 0.00 3.85
49 50 2.678336 CGTCCATTTTTCCCTGCTACTC 59.322 50.000 0.00 0.00 0.00 2.59
50 51 2.711542 CGTCCATTTTTCCCTGCTACT 58.288 47.619 0.00 0.00 0.00 2.57
51 52 1.132453 GCGTCCATTTTTCCCTGCTAC 59.868 52.381 0.00 0.00 0.00 3.58
52 53 1.459450 GCGTCCATTTTTCCCTGCTA 58.541 50.000 0.00 0.00 0.00 3.49
53 54 1.586154 CGCGTCCATTTTTCCCTGCT 61.586 55.000 0.00 0.00 0.00 4.24
54 55 1.154035 CGCGTCCATTTTTCCCTGC 60.154 57.895 0.00 0.00 0.00 4.85
55 56 1.094785 ATCGCGTCCATTTTTCCCTG 58.905 50.000 5.77 0.00 0.00 4.45
56 57 1.472480 CAATCGCGTCCATTTTTCCCT 59.528 47.619 5.77 0.00 0.00 4.20
57 58 1.470890 TCAATCGCGTCCATTTTTCCC 59.529 47.619 5.77 0.00 0.00 3.97
58 59 2.477863 CCTCAATCGCGTCCATTTTTCC 60.478 50.000 5.77 0.00 0.00 3.13
59 60 2.418628 TCCTCAATCGCGTCCATTTTTC 59.581 45.455 5.77 0.00 0.00 2.29
60 61 2.420022 CTCCTCAATCGCGTCCATTTTT 59.580 45.455 5.77 0.00 0.00 1.94
61 62 2.009774 CTCCTCAATCGCGTCCATTTT 58.990 47.619 5.77 0.00 0.00 1.82
62 63 1.207089 TCTCCTCAATCGCGTCCATTT 59.793 47.619 5.77 0.00 0.00 2.32
63 64 0.824109 TCTCCTCAATCGCGTCCATT 59.176 50.000 5.77 0.00 0.00 3.16
64 65 0.824109 TTCTCCTCAATCGCGTCCAT 59.176 50.000 5.77 0.00 0.00 3.41
65 66 0.173481 CTTCTCCTCAATCGCGTCCA 59.827 55.000 5.77 0.00 0.00 4.02
66 67 1.148759 GCTTCTCCTCAATCGCGTCC 61.149 60.000 5.77 0.00 0.00 4.79
67 68 1.475441 CGCTTCTCCTCAATCGCGTC 61.475 60.000 5.77 0.00 36.28 5.19
68 69 1.517257 CGCTTCTCCTCAATCGCGT 60.517 57.895 5.77 0.00 36.28 6.01
69 70 2.233654 CCGCTTCTCCTCAATCGCG 61.234 63.158 0.00 0.00 40.22 5.87
70 71 1.884926 CCCGCTTCTCCTCAATCGC 60.885 63.158 0.00 0.00 0.00 4.58
71 72 0.175760 TTCCCGCTTCTCCTCAATCG 59.824 55.000 0.00 0.00 0.00 3.34
72 73 1.474143 CCTTCCCGCTTCTCCTCAATC 60.474 57.143 0.00 0.00 0.00 2.67
73 74 0.543749 CCTTCCCGCTTCTCCTCAAT 59.456 55.000 0.00 0.00 0.00 2.57
74 75 1.553690 CCCTTCCCGCTTCTCCTCAA 61.554 60.000 0.00 0.00 0.00 3.02
75 76 1.990060 CCCTTCCCGCTTCTCCTCA 60.990 63.158 0.00 0.00 0.00 3.86
76 77 2.736826 CCCCTTCCCGCTTCTCCTC 61.737 68.421 0.00 0.00 0.00 3.71
77 78 2.689034 CCCCTTCCCGCTTCTCCT 60.689 66.667 0.00 0.00 0.00 3.69
78 79 4.491409 GCCCCTTCCCGCTTCTCC 62.491 72.222 0.00 0.00 0.00 3.71
79 80 4.840005 CGCCCCTTCCCGCTTCTC 62.840 72.222 0.00 0.00 0.00 2.87
81 82 4.176752 ATCGCCCCTTCCCGCTTC 62.177 66.667 0.00 0.00 0.00 3.86
82 83 4.176752 GATCGCCCCTTCCCGCTT 62.177 66.667 0.00 0.00 0.00 4.68
95 96 1.589993 AATCAGACAGCGGCGATCG 60.590 57.895 12.98 11.69 42.76 3.69
96 97 1.930100 CAATCAGACAGCGGCGATC 59.070 57.895 12.98 4.36 0.00 3.69
97 98 2.176273 GCAATCAGACAGCGGCGAT 61.176 57.895 12.98 0.00 0.00 4.58
98 99 2.815211 GCAATCAGACAGCGGCGA 60.815 61.111 12.98 0.00 0.00 5.54
99 100 2.816958 AGCAATCAGACAGCGGCG 60.817 61.111 0.51 0.51 0.00 6.46
100 101 2.758089 CCAGCAATCAGACAGCGGC 61.758 63.158 0.00 0.00 0.00 6.53
101 102 1.376424 ACCAGCAATCAGACAGCGG 60.376 57.895 0.00 0.00 0.00 5.52
102 103 0.952497 ACACCAGCAATCAGACAGCG 60.952 55.000 0.00 0.00 0.00 5.18
103 104 0.801251 GACACCAGCAATCAGACAGC 59.199 55.000 0.00 0.00 0.00 4.40
104 105 1.073964 CGACACCAGCAATCAGACAG 58.926 55.000 0.00 0.00 0.00 3.51
105 106 0.678950 TCGACACCAGCAATCAGACA 59.321 50.000 0.00 0.00 0.00 3.41
106 107 1.354040 CTCGACACCAGCAATCAGAC 58.646 55.000 0.00 0.00 0.00 3.51
107 108 0.247460 CCTCGACACCAGCAATCAGA 59.753 55.000 0.00 0.00 0.00 3.27
108 109 0.247460 TCCTCGACACCAGCAATCAG 59.753 55.000 0.00 0.00 0.00 2.90
109 110 0.904649 ATCCTCGACACCAGCAATCA 59.095 50.000 0.00 0.00 0.00 2.57
110 111 1.293924 CATCCTCGACACCAGCAATC 58.706 55.000 0.00 0.00 0.00 2.67
111 112 0.107508 CCATCCTCGACACCAGCAAT 60.108 55.000 0.00 0.00 0.00 3.56
112 113 1.296392 CCATCCTCGACACCAGCAA 59.704 57.895 0.00 0.00 0.00 3.91
113 114 2.981302 CCATCCTCGACACCAGCA 59.019 61.111 0.00 0.00 0.00 4.41
114 115 2.512515 GCCATCCTCGACACCAGC 60.513 66.667 0.00 0.00 0.00 4.85
115 116 0.531532 GATGCCATCCTCGACACCAG 60.532 60.000 0.00 0.00 0.00 4.00
116 117 1.522092 GATGCCATCCTCGACACCA 59.478 57.895 0.00 0.00 0.00 4.17
117 118 1.592669 CGATGCCATCCTCGACACC 60.593 63.158 0.00 0.00 37.05 4.16
118 119 1.141881 ACGATGCCATCCTCGACAC 59.858 57.895 0.00 0.00 38.24 3.67
119 120 1.141665 CACGATGCCATCCTCGACA 59.858 57.895 0.00 0.00 38.24 4.35
120 121 1.592669 CCACGATGCCATCCTCGAC 60.593 63.158 0.00 0.00 38.24 4.20
121 122 0.753848 TACCACGATGCCATCCTCGA 60.754 55.000 0.00 0.00 38.24 4.04
122 123 0.319040 CTACCACGATGCCATCCTCG 60.319 60.000 0.00 0.00 40.62 4.63
123 124 0.601311 GCTACCACGATGCCATCCTC 60.601 60.000 0.00 0.00 0.00 3.71
124 125 1.050988 AGCTACCACGATGCCATCCT 61.051 55.000 0.00 0.00 0.00 3.24
125 126 0.601311 GAGCTACCACGATGCCATCC 60.601 60.000 0.00 0.00 0.00 3.51
126 127 0.390860 AGAGCTACCACGATGCCATC 59.609 55.000 0.00 0.00 0.00 3.51
127 128 0.833287 AAGAGCTACCACGATGCCAT 59.167 50.000 0.00 0.00 0.00 4.40
128 129 0.108186 CAAGAGCTACCACGATGCCA 60.108 55.000 0.00 0.00 0.00 4.92
129 130 0.175760 TCAAGAGCTACCACGATGCC 59.824 55.000 0.00 0.00 0.00 4.40
130 131 1.863454 CATCAAGAGCTACCACGATGC 59.137 52.381 0.00 0.00 0.00 3.91
131 132 3.170791 ACATCAAGAGCTACCACGATG 57.829 47.619 0.00 8.66 37.01 3.84
132 133 3.954904 ACTACATCAAGAGCTACCACGAT 59.045 43.478 0.00 0.00 0.00 3.73
133 134 3.353557 ACTACATCAAGAGCTACCACGA 58.646 45.455 0.00 0.00 0.00 4.35
134 135 3.784701 ACTACATCAAGAGCTACCACG 57.215 47.619 0.00 0.00 0.00 4.94
135 136 6.806751 TGATAACTACATCAAGAGCTACCAC 58.193 40.000 0.00 0.00 32.01 4.16
136 137 7.603180 ATGATAACTACATCAAGAGCTACCA 57.397 36.000 0.00 0.00 38.39 3.25
137 138 8.894768 AAATGATAACTACATCAAGAGCTACC 57.105 34.615 0.00 0.00 38.39 3.18
138 139 8.983724 GGAAATGATAACTACATCAAGAGCTAC 58.016 37.037 0.00 0.00 38.39 3.58
139 140 8.150945 GGGAAATGATAACTACATCAAGAGCTA 58.849 37.037 0.00 0.00 38.39 3.32
140 141 6.995091 GGGAAATGATAACTACATCAAGAGCT 59.005 38.462 0.00 0.00 38.39 4.09
141 142 6.767902 TGGGAAATGATAACTACATCAAGAGC 59.232 38.462 0.00 0.00 38.39 4.09
142 143 7.227512 GGTGGGAAATGATAACTACATCAAGAG 59.772 40.741 0.00 0.00 38.39 2.85
143 144 7.054124 GGTGGGAAATGATAACTACATCAAGA 58.946 38.462 0.00 0.00 38.39 3.02
144 145 6.828273 TGGTGGGAAATGATAACTACATCAAG 59.172 38.462 0.00 0.00 38.39 3.02
145 146 6.726379 TGGTGGGAAATGATAACTACATCAA 58.274 36.000 0.00 0.00 38.39 2.57
146 147 6.320434 TGGTGGGAAATGATAACTACATCA 57.680 37.500 0.00 0.00 39.20 3.07
147 148 7.227156 AGATGGTGGGAAATGATAACTACATC 58.773 38.462 0.00 0.00 0.00 3.06
148 149 7.154191 AGATGGTGGGAAATGATAACTACAT 57.846 36.000 0.00 0.00 0.00 2.29
149 150 6.575244 AGATGGTGGGAAATGATAACTACA 57.425 37.500 0.00 0.00 0.00 2.74
150 151 8.211629 AGTTAGATGGTGGGAAATGATAACTAC 58.788 37.037 0.00 0.00 31.19 2.73
151 152 8.331931 AGTTAGATGGTGGGAAATGATAACTA 57.668 34.615 0.00 0.00 31.19 2.24
152 153 7.092444 TGAGTTAGATGGTGGGAAATGATAACT 60.092 37.037 0.00 0.00 34.57 2.24
153 154 7.012421 GTGAGTTAGATGGTGGGAAATGATAAC 59.988 40.741 0.00 0.00 0.00 1.89
154 155 7.054124 GTGAGTTAGATGGTGGGAAATGATAA 58.946 38.462 0.00 0.00 0.00 1.75
155 156 6.157820 TGTGAGTTAGATGGTGGGAAATGATA 59.842 38.462 0.00 0.00 0.00 2.15
156 157 5.044919 TGTGAGTTAGATGGTGGGAAATGAT 60.045 40.000 0.00 0.00 0.00 2.45
157 158 4.288366 TGTGAGTTAGATGGTGGGAAATGA 59.712 41.667 0.00 0.00 0.00 2.57
158 159 4.396166 GTGTGAGTTAGATGGTGGGAAATG 59.604 45.833 0.00 0.00 0.00 2.32
159 160 4.042809 TGTGTGAGTTAGATGGTGGGAAAT 59.957 41.667 0.00 0.00 0.00 2.17
160 161 3.392947 TGTGTGAGTTAGATGGTGGGAAA 59.607 43.478 0.00 0.00 0.00 3.13
161 162 2.976185 TGTGTGAGTTAGATGGTGGGAA 59.024 45.455 0.00 0.00 0.00 3.97
162 163 2.567169 CTGTGTGAGTTAGATGGTGGGA 59.433 50.000 0.00 0.00 0.00 4.37
163 164 2.567169 TCTGTGTGAGTTAGATGGTGGG 59.433 50.000 0.00 0.00 0.00 4.61
164 165 3.511540 TCTCTGTGTGAGTTAGATGGTGG 59.488 47.826 0.00 0.00 43.13 4.61
165 166 4.460731 TCTCTCTGTGTGAGTTAGATGGTG 59.539 45.833 0.00 0.00 43.13 4.17
166 167 4.667573 TCTCTCTGTGTGAGTTAGATGGT 58.332 43.478 0.00 0.00 43.13 3.55
167 168 5.417266 TCTTCTCTCTGTGTGAGTTAGATGG 59.583 44.000 0.00 0.00 43.13 3.51
168 169 6.374053 TCTCTTCTCTCTGTGTGAGTTAGATG 59.626 42.308 0.00 0.00 43.13 2.90
169 170 6.480763 TCTCTTCTCTCTGTGTGAGTTAGAT 58.519 40.000 0.00 0.00 43.13 1.98
170 171 5.870706 TCTCTTCTCTCTGTGTGAGTTAGA 58.129 41.667 0.00 0.00 43.13 2.10
171 172 6.404623 CCATCTCTTCTCTCTGTGTGAGTTAG 60.405 46.154 0.00 0.00 43.13 2.34
172 173 5.417266 CCATCTCTTCTCTCTGTGTGAGTTA 59.583 44.000 0.00 0.00 43.13 2.24
173 174 4.220382 CCATCTCTTCTCTCTGTGTGAGTT 59.780 45.833 0.00 0.00 43.13 3.01
174 175 3.763360 CCATCTCTTCTCTCTGTGTGAGT 59.237 47.826 0.00 0.00 43.13 3.41
175 176 3.130869 CCCATCTCTTCTCTCTGTGTGAG 59.869 52.174 0.00 0.00 43.96 3.51
176 177 3.095332 CCCATCTCTTCTCTCTGTGTGA 58.905 50.000 0.00 0.00 0.00 3.58
177 178 3.095332 TCCCATCTCTTCTCTCTGTGTG 58.905 50.000 0.00 0.00 0.00 3.82
178 179 3.364549 CTCCCATCTCTTCTCTCTGTGT 58.635 50.000 0.00 0.00 0.00 3.72
179 180 2.694628 CCTCCCATCTCTTCTCTCTGTG 59.305 54.545 0.00 0.00 0.00 3.66
180 181 2.359143 CCCTCCCATCTCTTCTCTCTGT 60.359 54.545 0.00 0.00 0.00 3.41
181 182 2.318908 CCCTCCCATCTCTTCTCTCTG 58.681 57.143 0.00 0.00 0.00 3.35
182 183 1.412937 GCCCTCCCATCTCTTCTCTCT 60.413 57.143 0.00 0.00 0.00 3.10
183 184 1.047801 GCCCTCCCATCTCTTCTCTC 58.952 60.000 0.00 0.00 0.00 3.20
184 185 0.341258 TGCCCTCCCATCTCTTCTCT 59.659 55.000 0.00 0.00 0.00 3.10
185 186 0.467804 GTGCCCTCCCATCTCTTCTC 59.532 60.000 0.00 0.00 0.00 2.87
186 187 0.985490 GGTGCCCTCCCATCTCTTCT 60.985 60.000 0.00 0.00 0.00 2.85
187 188 0.985490 AGGTGCCCTCCCATCTCTTC 60.985 60.000 0.00 0.00 0.00 2.87
188 189 0.551131 AAGGTGCCCTCCCATCTCTT 60.551 55.000 0.00 0.00 30.89 2.85
189 190 1.083706 AAGGTGCCCTCCCATCTCT 59.916 57.895 0.00 0.00 30.89 3.10
190 191 1.225704 CAAGGTGCCCTCCCATCTC 59.774 63.158 0.00 0.00 30.89 2.75
191 192 1.542375 ACAAGGTGCCCTCCCATCT 60.542 57.895 0.00 0.00 30.89 2.90
192 193 1.077429 GACAAGGTGCCCTCCCATC 60.077 63.158 0.00 0.00 30.89 3.51
193 194 2.616458 GGACAAGGTGCCCTCCCAT 61.616 63.158 0.00 0.00 30.89 4.00
194 195 3.256960 GGACAAGGTGCCCTCCCA 61.257 66.667 0.00 0.00 30.89 4.37
195 196 2.616458 ATGGACAAGGTGCCCTCCC 61.616 63.158 0.00 0.00 30.89 4.30
196 197 1.379044 CATGGACAAGGTGCCCTCC 60.379 63.158 0.00 0.00 30.89 4.30
197 198 1.379044 CCATGGACAAGGTGCCCTC 60.379 63.158 5.56 0.00 30.89 4.30
198 199 2.765969 CCATGGACAAGGTGCCCT 59.234 61.111 5.56 0.00 33.87 5.19
199 200 3.070576 GCCATGGACAAGGTGCCC 61.071 66.667 18.40 0.00 0.00 5.36
200 201 2.036256 AGCCATGGACAAGGTGCC 59.964 61.111 18.40 0.00 0.00 5.01
201 202 2.998279 GCAGCCATGGACAAGGTGC 61.998 63.158 18.40 11.68 0.00 5.01
202 203 1.592400 CTGCAGCCATGGACAAGGTG 61.592 60.000 18.40 4.73 0.00 4.00
203 204 1.303888 CTGCAGCCATGGACAAGGT 60.304 57.895 18.40 0.00 0.00 3.50
204 205 2.707849 GCTGCAGCCATGGACAAGG 61.708 63.158 28.76 2.90 34.31 3.61
205 206 1.974875 TGCTGCAGCCATGGACAAG 60.975 57.895 34.64 7.85 41.18 3.16
206 207 2.115695 TGCTGCAGCCATGGACAA 59.884 55.556 34.64 11.80 41.18 3.18
207 208 2.674033 GTGCTGCAGCCATGGACA 60.674 61.111 34.64 12.62 41.18 4.02
208 209 3.446570 GGTGCTGCAGCCATGGAC 61.447 66.667 34.64 24.57 41.18 4.02
209 210 3.931190 CTGGTGCTGCAGCCATGGA 62.931 63.158 34.64 14.24 41.18 3.41
210 211 3.449227 CTGGTGCTGCAGCCATGG 61.449 66.667 34.64 18.56 41.18 3.66
211 212 3.449227 CCTGGTGCTGCAGCCATG 61.449 66.667 34.64 19.08 41.18 3.66
212 213 4.753662 CCCTGGTGCTGCAGCCAT 62.754 66.667 34.64 0.00 41.18 4.40
222 223 4.729918 GGTGCTCTGGCCCTGGTG 62.730 72.222 0.00 0.00 37.74 4.17
223 224 4.990910 AGGTGCTCTGGCCCTGGT 62.991 66.667 0.00 0.00 37.60 4.00
224 225 3.655211 AAGGTGCTCTGGCCCTGG 61.655 66.667 0.00 0.00 38.50 4.45
225 226 2.360852 CAAGGTGCTCTGGCCCTG 60.361 66.667 0.00 0.00 38.50 4.45
226 227 4.357279 GCAAGGTGCTCTGGCCCT 62.357 66.667 0.00 0.00 40.96 5.19
235 236 1.079127 TTCGGCTAGAGCAAGGTGC 60.079 57.895 3.54 0.00 45.46 5.01
236 237 1.086634 GCTTCGGCTAGAGCAAGGTG 61.087 60.000 3.54 0.00 44.36 4.00
237 238 1.219393 GCTTCGGCTAGAGCAAGGT 59.781 57.895 3.54 0.00 44.36 3.50
238 239 0.809241 CTGCTTCGGCTAGAGCAAGG 60.809 60.000 3.54 0.00 44.36 3.61
239 240 0.108424 ACTGCTTCGGCTAGAGCAAG 60.108 55.000 3.54 0.79 44.36 4.01
240 241 0.390340 CACTGCTTCGGCTAGAGCAA 60.390 55.000 3.54 0.00 44.36 3.91
241 242 1.216444 CACTGCTTCGGCTAGAGCA 59.784 57.895 3.54 4.02 44.36 4.26
242 243 0.390472 AACACTGCTTCGGCTAGAGC 60.390 55.000 0.00 0.00 42.37 4.09
243 244 1.337260 ACAACACTGCTTCGGCTAGAG 60.337 52.381 0.00 0.00 42.37 2.43
244 245 0.679505 ACAACACTGCTTCGGCTAGA 59.320 50.000 0.00 0.00 42.37 2.43
245 246 0.792640 CACAACACTGCTTCGGCTAG 59.207 55.000 0.00 0.00 42.37 3.42
246 247 0.602638 CCACAACACTGCTTCGGCTA 60.603 55.000 0.00 0.00 42.37 3.93
247 248 1.893808 CCACAACACTGCTTCGGCT 60.894 57.895 0.00 0.00 42.37 5.52
248 249 2.639286 CCACAACACTGCTTCGGC 59.361 61.111 0.00 0.00 42.19 5.54
249 250 2.908073 GCCCACAACACTGCTTCGG 61.908 63.158 0.00 0.00 0.00 4.30
250 251 2.639286 GCCCACAACACTGCTTCG 59.361 61.111 0.00 0.00 0.00 3.79
251 252 2.639286 CGCCCACAACACTGCTTC 59.361 61.111 0.00 0.00 0.00 3.86
252 253 3.595758 GCGCCCACAACACTGCTT 61.596 61.111 0.00 0.00 0.00 3.91
280 281 1.395826 CCCCAGATCGAGGACAGGTC 61.396 65.000 8.62 0.00 0.00 3.85
281 282 1.381872 CCCCAGATCGAGGACAGGT 60.382 63.158 8.62 0.00 0.00 4.00
282 283 2.801631 GCCCCAGATCGAGGACAGG 61.802 68.421 8.62 3.43 0.00 4.00
283 284 2.818132 GCCCCAGATCGAGGACAG 59.182 66.667 8.62 0.00 0.00 3.51
284 285 3.147595 CGCCCCAGATCGAGGACA 61.148 66.667 8.62 0.00 0.00 4.02
285 286 2.833582 TCGCCCCAGATCGAGGAC 60.834 66.667 8.62 0.00 0.00 3.85
286 287 2.519541 CTCGCCCCAGATCGAGGA 60.520 66.667 8.62 0.00 45.89 3.71
289 290 4.137615 TCCCTCGCCCCAGATCGA 62.138 66.667 0.00 0.00 0.00 3.59
290 291 3.610669 CTCCCTCGCCCCAGATCG 61.611 72.222 0.00 0.00 0.00 3.69
291 292 2.123251 TCTCCCTCGCCCCAGATC 60.123 66.667 0.00 0.00 0.00 2.75
292 293 2.123077 CTCTCCCTCGCCCCAGAT 60.123 66.667 0.00 0.00 0.00 2.90
293 294 4.465446 CCTCTCCCTCGCCCCAGA 62.465 72.222 0.00 0.00 0.00 3.86
297 298 4.798682 TTCCCCTCTCCCTCGCCC 62.799 72.222 0.00 0.00 0.00 6.13
298 299 3.157949 CTTCCCCTCTCCCTCGCC 61.158 72.222 0.00 0.00 0.00 5.54
299 300 3.157949 CCTTCCCCTCTCCCTCGC 61.158 72.222 0.00 0.00 0.00 5.03
300 301 1.456705 CTCCTTCCCCTCTCCCTCG 60.457 68.421 0.00 0.00 0.00 4.63
301 302 1.074850 CCTCCTTCCCCTCTCCCTC 60.075 68.421 0.00 0.00 0.00 4.30
302 303 1.465189 AACCTCCTTCCCCTCTCCCT 61.465 60.000 0.00 0.00 0.00 4.20
303 304 1.083141 AACCTCCTTCCCCTCTCCC 59.917 63.158 0.00 0.00 0.00 4.30
304 305 0.252742 TCAACCTCCTTCCCCTCTCC 60.253 60.000 0.00 0.00 0.00 3.71
305 306 1.488393 CATCAACCTCCTTCCCCTCTC 59.512 57.143 0.00 0.00 0.00 3.20
306 307 1.081174 TCATCAACCTCCTTCCCCTCT 59.919 52.381 0.00 0.00 0.00 3.69
307 308 1.584724 TCATCAACCTCCTTCCCCTC 58.415 55.000 0.00 0.00 0.00 4.30
308 309 1.849039 CATCATCAACCTCCTTCCCCT 59.151 52.381 0.00 0.00 0.00 4.79
309 310 1.846439 TCATCATCAACCTCCTTCCCC 59.154 52.381 0.00 0.00 0.00 4.81
310 311 2.158696 CCTCATCATCAACCTCCTTCCC 60.159 54.545 0.00 0.00 0.00 3.97
311 312 2.774234 TCCTCATCATCAACCTCCTTCC 59.226 50.000 0.00 0.00 0.00 3.46
312 313 3.181456 CCTCCTCATCATCAACCTCCTTC 60.181 52.174 0.00 0.00 0.00 3.46
313 314 2.776536 CCTCCTCATCATCAACCTCCTT 59.223 50.000 0.00 0.00 0.00 3.36
314 315 2.022625 TCCTCCTCATCATCAACCTCCT 60.023 50.000 0.00 0.00 0.00 3.69
315 316 2.368221 CTCCTCCTCATCATCAACCTCC 59.632 54.545 0.00 0.00 0.00 4.30
316 317 3.303938 TCTCCTCCTCATCATCAACCTC 58.696 50.000 0.00 0.00 0.00 3.85
317 318 3.411454 TCTCCTCCTCATCATCAACCT 57.589 47.619 0.00 0.00 0.00 3.50
318 319 3.181456 CCTTCTCCTCCTCATCATCAACC 60.181 52.174 0.00 0.00 0.00 3.77
319 320 3.454082 ACCTTCTCCTCCTCATCATCAAC 59.546 47.826 0.00 0.00 0.00 3.18
320 321 3.729108 ACCTTCTCCTCCTCATCATCAA 58.271 45.455 0.00 0.00 0.00 2.57
321 322 3.411454 ACCTTCTCCTCCTCATCATCA 57.589 47.619 0.00 0.00 0.00 3.07
322 323 4.283212 CCTTACCTTCTCCTCCTCATCATC 59.717 50.000 0.00 0.00 0.00 2.92
323 324 4.230455 CCTTACCTTCTCCTCCTCATCAT 58.770 47.826 0.00 0.00 0.00 2.45
324 325 3.631087 CCCTTACCTTCTCCTCCTCATCA 60.631 52.174 0.00 0.00 0.00 3.07
325 326 2.969262 CCCTTACCTTCTCCTCCTCATC 59.031 54.545 0.00 0.00 0.00 2.92
326 327 2.360854 CCCCTTACCTTCTCCTCCTCAT 60.361 54.545 0.00 0.00 0.00 2.90
327 328 1.008449 CCCCTTACCTTCTCCTCCTCA 59.992 57.143 0.00 0.00 0.00 3.86
328 329 1.291335 TCCCCTTACCTTCTCCTCCTC 59.709 57.143 0.00 0.00 0.00 3.71
329 330 1.405243 TCCCCTTACCTTCTCCTCCT 58.595 55.000 0.00 0.00 0.00 3.69
330 331 2.050918 CATCCCCTTACCTTCTCCTCC 58.949 57.143 0.00 0.00 0.00 4.30
331 332 2.969262 CTCATCCCCTTACCTTCTCCTC 59.031 54.545 0.00 0.00 0.00 3.71
332 333 2.592512 TCTCATCCCCTTACCTTCTCCT 59.407 50.000 0.00 0.00 0.00 3.69
333 334 2.969262 CTCTCATCCCCTTACCTTCTCC 59.031 54.545 0.00 0.00 0.00 3.71
334 335 3.917300 TCTCTCATCCCCTTACCTTCTC 58.083 50.000 0.00 0.00 0.00 2.87
335 336 4.294347 CTTCTCTCATCCCCTTACCTTCT 58.706 47.826 0.00 0.00 0.00 2.85
336 337 3.389656 CCTTCTCTCATCCCCTTACCTTC 59.610 52.174 0.00 0.00 0.00 3.46
337 338 3.388913 CCTTCTCTCATCCCCTTACCTT 58.611 50.000 0.00 0.00 0.00 3.50
338 339 2.360854 CCCTTCTCTCATCCCCTTACCT 60.361 54.545 0.00 0.00 0.00 3.08
339 340 2.050918 CCCTTCTCTCATCCCCTTACC 58.949 57.143 0.00 0.00 0.00 2.85
340 341 2.050918 CCCCTTCTCTCATCCCCTTAC 58.949 57.143 0.00 0.00 0.00 2.34
341 342 1.061346 CCCCCTTCTCTCATCCCCTTA 60.061 57.143 0.00 0.00 0.00 2.69
342 343 0.327964 CCCCCTTCTCTCATCCCCTT 60.328 60.000 0.00 0.00 0.00 3.95
343 344 1.319799 CCCCCTTCTCTCATCCCCT 59.680 63.158 0.00 0.00 0.00 4.79
344 345 1.004891 ACCCCCTTCTCTCATCCCC 59.995 63.158 0.00 0.00 0.00 4.81
345 346 1.348775 CCACCCCCTTCTCTCATCCC 61.349 65.000 0.00 0.00 0.00 3.85
346 347 0.326618 TCCACCCCCTTCTCTCATCC 60.327 60.000 0.00 0.00 0.00 3.51
347 348 1.127343 CTCCACCCCCTTCTCTCATC 58.873 60.000 0.00 0.00 0.00 2.92
348 349 0.327000 CCTCCACCCCCTTCTCTCAT 60.327 60.000 0.00 0.00 0.00 2.90
349 350 1.081092 CCTCCACCCCCTTCTCTCA 59.919 63.158 0.00 0.00 0.00 3.27
350 351 2.371259 GCCTCCACCCCCTTCTCTC 61.371 68.421 0.00 0.00 0.00 3.20
351 352 2.285743 GCCTCCACCCCCTTCTCT 60.286 66.667 0.00 0.00 0.00 3.10
352 353 3.787001 CGCCTCCACCCCCTTCTC 61.787 72.222 0.00 0.00 0.00 2.87
353 354 4.658786 ACGCCTCCACCCCCTTCT 62.659 66.667 0.00 0.00 0.00 2.85
354 355 4.097361 GACGCCTCCACCCCCTTC 62.097 72.222 0.00 0.00 0.00 3.46
355 356 4.974438 TGACGCCTCCACCCCCTT 62.974 66.667 0.00 0.00 0.00 3.95
376 377 3.246880 AACGGTGACCTCCCCCAC 61.247 66.667 0.00 0.00 0.00 4.61
377 378 3.246112 CAACGGTGACCTCCCCCA 61.246 66.667 0.00 0.00 0.00 4.96
378 379 4.029809 CCAACGGTGACCTCCCCC 62.030 72.222 0.00 0.00 0.00 5.40
379 380 4.717313 GCCAACGGTGACCTCCCC 62.717 72.222 0.00 0.00 0.00 4.81
408 409 3.839432 GTTCCTCTCCCTCGGCCG 61.839 72.222 22.12 22.12 0.00 6.13
409 410 3.839432 CGTTCCTCTCCCTCGGCC 61.839 72.222 0.00 0.00 0.00 6.13
410 411 3.839432 CCGTTCCTCTCCCTCGGC 61.839 72.222 0.00 0.00 35.01 5.54
411 412 3.148279 CCCGTTCCTCTCCCTCGG 61.148 72.222 0.00 0.00 40.72 4.63
412 413 3.839432 GCCCGTTCCTCTCCCTCG 61.839 72.222 0.00 0.00 0.00 4.63
413 414 3.839432 CGCCCGTTCCTCTCCCTC 61.839 72.222 0.00 0.00 0.00 4.30
416 417 3.155167 ATCCGCCCGTTCCTCTCC 61.155 66.667 0.00 0.00 0.00 3.71
417 418 2.107141 CATCCGCCCGTTCCTCTC 59.893 66.667 0.00 0.00 0.00 3.20
418 419 3.470888 CCATCCGCCCGTTCCTCT 61.471 66.667 0.00 0.00 0.00 3.69
419 420 4.547367 CCCATCCGCCCGTTCCTC 62.547 72.222 0.00 0.00 0.00 3.71
422 423 4.104183 TTCCCCATCCGCCCGTTC 62.104 66.667 0.00 0.00 0.00 3.95
423 424 4.419921 GTTCCCCATCCGCCCGTT 62.420 66.667 0.00 0.00 0.00 4.44
430 431 4.506255 CAGCCCCGTTCCCCATCC 62.506 72.222 0.00 0.00 0.00 3.51
431 432 4.506255 CCAGCCCCGTTCCCCATC 62.506 72.222 0.00 0.00 0.00 3.51
436 437 4.759205 ATTGGCCAGCCCCGTTCC 62.759 66.667 5.11 0.00 34.56 3.62
437 438 3.140814 GATTGGCCAGCCCCGTTC 61.141 66.667 5.11 0.00 34.56 3.95
438 439 3.645268 GAGATTGGCCAGCCCCGTT 62.645 63.158 5.11 0.00 34.56 4.44
439 440 4.115199 GAGATTGGCCAGCCCCGT 62.115 66.667 5.11 0.00 34.56 5.28
440 441 3.764160 GAGAGATTGGCCAGCCCCG 62.764 68.421 5.11 0.00 34.56 5.73
441 442 1.931007 AAGAGAGATTGGCCAGCCCC 61.931 60.000 5.11 0.00 34.56 5.80
442 443 0.033699 AAAGAGAGATTGGCCAGCCC 60.034 55.000 5.11 0.00 34.56 5.19
443 444 1.064832 AGAAAGAGAGATTGGCCAGCC 60.065 52.381 5.11 0.38 0.00 4.85
444 445 2.416680 AGAAAGAGAGATTGGCCAGC 57.583 50.000 5.11 1.90 0.00 4.85
445 446 3.940221 CAGAAGAAAGAGAGATTGGCCAG 59.060 47.826 5.11 0.00 0.00 4.85
446 447 3.871463 GCAGAAGAAAGAGAGATTGGCCA 60.871 47.826 0.00 0.00 0.00 5.36
447 448 2.682352 GCAGAAGAAAGAGAGATTGGCC 59.318 50.000 0.00 0.00 0.00 5.36
448 449 3.341823 TGCAGAAGAAAGAGAGATTGGC 58.658 45.455 0.00 0.00 0.00 4.52
449 450 5.243981 TCTTGCAGAAGAAAGAGAGATTGG 58.756 41.667 0.00 0.00 34.37 3.16
450 451 6.798315 TTCTTGCAGAAGAAAGAGAGATTG 57.202 37.500 0.00 0.00 43.79 2.67
460 461 4.658071 GTTGTTCGTTTCTTGCAGAAGAA 58.342 39.130 0.00 0.00 44.83 2.52
461 462 3.242284 CGTTGTTCGTTTCTTGCAGAAGA 60.242 43.478 0.00 0.00 35.37 2.87
462 463 3.029074 CGTTGTTCGTTTCTTGCAGAAG 58.971 45.455 0.00 0.00 35.37 2.85
463 464 3.046285 CGTTGTTCGTTTCTTGCAGAA 57.954 42.857 0.00 0.00 31.28 3.02
464 465 2.730183 CGTTGTTCGTTTCTTGCAGA 57.270 45.000 0.00 0.00 34.52 4.26
475 476 2.551270 GCTGCTCCACGTTGTTCG 59.449 61.111 0.00 0.00 46.00 3.95
476 477 1.444119 TTGGCTGCTCCACGTTGTTC 61.444 55.000 0.00 0.00 46.55 3.18
477 478 1.447317 CTTGGCTGCTCCACGTTGTT 61.447 55.000 0.00 0.00 46.55 2.83
478 479 1.893808 CTTGGCTGCTCCACGTTGT 60.894 57.895 0.00 0.00 46.55 3.32
479 480 1.165907 TTCTTGGCTGCTCCACGTTG 61.166 55.000 0.00 0.00 46.55 4.10
480 481 0.465460 TTTCTTGGCTGCTCCACGTT 60.465 50.000 0.00 0.00 46.55 3.99
481 482 0.886490 CTTTCTTGGCTGCTCCACGT 60.886 55.000 0.00 0.00 46.55 4.49
482 483 1.871772 CTTTCTTGGCTGCTCCACG 59.128 57.895 0.00 0.00 46.55 4.94
483 484 1.174712 TGCTTTCTTGGCTGCTCCAC 61.175 55.000 0.00 0.00 46.55 4.02
484 485 0.467844 TTGCTTTCTTGGCTGCTCCA 60.468 50.000 0.00 0.00 44.85 3.86
485 486 0.675633 TTTGCTTTCTTGGCTGCTCC 59.324 50.000 0.00 0.00 0.00 4.70
486 487 1.339291 AGTTTGCTTTCTTGGCTGCTC 59.661 47.619 0.00 0.00 0.00 4.26
487 488 1.068127 CAGTTTGCTTTCTTGGCTGCT 59.932 47.619 0.00 0.00 0.00 4.24
488 489 1.494824 CAGTTTGCTTTCTTGGCTGC 58.505 50.000 0.00 0.00 0.00 5.25
489 490 1.494824 GCAGTTTGCTTTCTTGGCTG 58.505 50.000 0.00 0.00 40.96 4.85
490 491 0.390492 GGCAGTTTGCTTTCTTGGCT 59.610 50.000 0.67 0.00 44.28 4.75
491 492 0.940991 CGGCAGTTTGCTTTCTTGGC 60.941 55.000 0.67 0.00 44.28 4.52
492 493 0.667993 TCGGCAGTTTGCTTTCTTGG 59.332 50.000 0.67 0.00 44.28 3.61
493 494 2.589014 GATCGGCAGTTTGCTTTCTTG 58.411 47.619 0.67 0.00 44.28 3.02
494 495 1.541588 GGATCGGCAGTTTGCTTTCTT 59.458 47.619 0.67 0.00 44.28 2.52
495 496 1.168714 GGATCGGCAGTTTGCTTTCT 58.831 50.000 0.67 0.00 44.28 2.52
496 497 0.171231 GGGATCGGCAGTTTGCTTTC 59.829 55.000 0.67 0.00 44.28 2.62
497 498 0.251341 AGGGATCGGCAGTTTGCTTT 60.251 50.000 0.67 0.00 44.28 3.51
498 499 0.251341 AAGGGATCGGCAGTTTGCTT 60.251 50.000 0.67 0.00 44.28 3.91
499 500 0.251341 AAAGGGATCGGCAGTTTGCT 60.251 50.000 0.67 0.00 44.28 3.91
500 501 0.603065 AAAAGGGATCGGCAGTTTGC 59.397 50.000 0.00 0.00 44.08 3.68
501 502 1.613437 ACAAAAGGGATCGGCAGTTTG 59.387 47.619 0.00 0.00 33.31 2.93
502 503 1.613437 CACAAAAGGGATCGGCAGTTT 59.387 47.619 0.00 0.00 0.00 2.66
503 504 1.247567 CACAAAAGGGATCGGCAGTT 58.752 50.000 0.00 0.00 0.00 3.16
504 505 0.110486 ACACAAAAGGGATCGGCAGT 59.890 50.000 0.00 0.00 0.00 4.40
505 506 0.804989 GACACAAAAGGGATCGGCAG 59.195 55.000 0.00 0.00 0.00 4.85
506 507 0.953471 CGACACAAAAGGGATCGGCA 60.953 55.000 0.00 0.00 0.00 5.69
507 508 0.953960 ACGACACAAAAGGGATCGGC 60.954 55.000 0.00 0.00 37.11 5.54
508 509 1.997606 GTACGACACAAAAGGGATCGG 59.002 52.381 0.00 0.00 37.11 4.18
509 510 1.997606 GGTACGACACAAAAGGGATCG 59.002 52.381 0.00 0.00 38.71 3.69
510 511 3.329929 AGGTACGACACAAAAGGGATC 57.670 47.619 0.00 0.00 0.00 3.36
511 512 4.895668 TTAGGTACGACACAAAAGGGAT 57.104 40.909 0.00 0.00 0.00 3.85
512 513 4.895668 ATTAGGTACGACACAAAAGGGA 57.104 40.909 0.00 0.00 0.00 4.20
525 526 4.357996 GCAGTCCAAGTCGTATTAGGTAC 58.642 47.826 0.00 0.00 0.00 3.34
526 527 3.065786 CGCAGTCCAAGTCGTATTAGGTA 59.934 47.826 0.00 0.00 0.00 3.08
527 528 2.159282 CGCAGTCCAAGTCGTATTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
528 529 2.098607 TCGCAGTCCAAGTCGTATTAGG 59.901 50.000 0.00 0.00 0.00 2.69
529 530 3.064958 TCTCGCAGTCCAAGTCGTATTAG 59.935 47.826 0.00 0.00 0.00 1.73
530 531 3.011818 TCTCGCAGTCCAAGTCGTATTA 58.988 45.455 0.00 0.00 0.00 0.98
531 532 1.816835 TCTCGCAGTCCAAGTCGTATT 59.183 47.619 0.00 0.00 0.00 1.89
532 533 1.402259 CTCTCGCAGTCCAAGTCGTAT 59.598 52.381 0.00 0.00 0.00 3.06
533 534 0.803117 CTCTCGCAGTCCAAGTCGTA 59.197 55.000 0.00 0.00 0.00 3.43
534 535 0.889638 TCTCTCGCAGTCCAAGTCGT 60.890 55.000 0.00 0.00 0.00 4.34
535 536 0.455295 GTCTCTCGCAGTCCAAGTCG 60.455 60.000 0.00 0.00 0.00 4.18
536 537 0.598562 TGTCTCTCGCAGTCCAAGTC 59.401 55.000 0.00 0.00 0.00 3.01
537 538 1.040646 TTGTCTCTCGCAGTCCAAGT 58.959 50.000 0.00 0.00 0.00 3.16
538 539 2.154854 TTTGTCTCTCGCAGTCCAAG 57.845 50.000 0.00 0.00 0.00 3.61
539 540 2.613026 TTTTGTCTCTCGCAGTCCAA 57.387 45.000 0.00 0.00 0.00 3.53
540 541 2.416747 CATTTTGTCTCTCGCAGTCCA 58.583 47.619 0.00 0.00 0.00 4.02
541 542 1.129437 GCATTTTGTCTCTCGCAGTCC 59.871 52.381 0.00 0.00 0.00 3.85
542 543 1.129437 GGCATTTTGTCTCTCGCAGTC 59.871 52.381 0.00 0.00 0.00 3.51
543 544 1.160137 GGCATTTTGTCTCTCGCAGT 58.840 50.000 0.00 0.00 0.00 4.40
544 545 0.449388 GGGCATTTTGTCTCTCGCAG 59.551 55.000 0.00 0.00 0.00 5.18
545 546 0.036732 AGGGCATTTTGTCTCTCGCA 59.963 50.000 0.00 0.00 0.00 5.10
546 547 0.449388 CAGGGCATTTTGTCTCTCGC 59.551 55.000 0.00 0.00 0.00 5.03
547 548 0.449388 GCAGGGCATTTTGTCTCTCG 59.551 55.000 0.00 0.00 0.00 4.04
548 549 1.831580 AGCAGGGCATTTTGTCTCTC 58.168 50.000 0.00 0.00 0.00 3.20
549 550 2.040278 TGTAGCAGGGCATTTTGTCTCT 59.960 45.455 0.00 0.00 0.00 3.10
550 551 2.436417 TGTAGCAGGGCATTTTGTCTC 58.564 47.619 0.00 0.00 0.00 3.36
551 552 2.584835 TGTAGCAGGGCATTTTGTCT 57.415 45.000 0.00 0.00 0.00 3.41
552 553 2.099756 GGATGTAGCAGGGCATTTTGTC 59.900 50.000 0.00 0.00 0.00 3.18
553 554 2.102578 GGATGTAGCAGGGCATTTTGT 58.897 47.619 0.00 0.00 0.00 2.83
554 555 2.101783 TGGATGTAGCAGGGCATTTTG 58.898 47.619 0.00 0.00 0.00 2.44
555 556 2.530460 TGGATGTAGCAGGGCATTTT 57.470 45.000 0.00 0.00 0.00 1.82
556 557 2.530460 TTGGATGTAGCAGGGCATTT 57.470 45.000 0.00 0.00 0.00 2.32
557 558 2.696707 CAATTGGATGTAGCAGGGCATT 59.303 45.455 0.00 0.00 0.00 3.56
558 559 2.091720 TCAATTGGATGTAGCAGGGCAT 60.092 45.455 5.42 0.00 0.00 4.40
559 560 1.284491 TCAATTGGATGTAGCAGGGCA 59.716 47.619 5.42 0.00 0.00 5.36
560 561 1.678101 GTCAATTGGATGTAGCAGGGC 59.322 52.381 5.42 0.00 0.00 5.19
561 562 2.301346 GGTCAATTGGATGTAGCAGGG 58.699 52.381 5.42 0.00 0.00 4.45
562 563 2.947652 CTGGTCAATTGGATGTAGCAGG 59.052 50.000 12.92 0.00 33.25 4.85
563 564 2.357009 GCTGGTCAATTGGATGTAGCAG 59.643 50.000 15.30 15.30 38.40 4.24
564 565 2.368439 GCTGGTCAATTGGATGTAGCA 58.632 47.619 5.42 0.73 0.00 3.49
565 566 1.331756 CGCTGGTCAATTGGATGTAGC 59.668 52.381 5.42 8.04 0.00 3.58
566 567 1.331756 GCGCTGGTCAATTGGATGTAG 59.668 52.381 5.42 0.00 0.00 2.74
567 568 1.339535 TGCGCTGGTCAATTGGATGTA 60.340 47.619 9.73 0.00 0.00 2.29
568 569 0.608856 TGCGCTGGTCAATTGGATGT 60.609 50.000 9.73 0.00 0.00 3.06
569 570 0.527113 TTGCGCTGGTCAATTGGATG 59.473 50.000 9.73 0.00 0.00 3.51
570 571 1.203052 CTTTGCGCTGGTCAATTGGAT 59.797 47.619 9.73 0.00 0.00 3.41
571 572 0.597568 CTTTGCGCTGGTCAATTGGA 59.402 50.000 9.73 0.00 0.00 3.53
572 573 0.314935 ACTTTGCGCTGGTCAATTGG 59.685 50.000 9.73 0.00 0.00 3.16
573 574 2.053627 GAACTTTGCGCTGGTCAATTG 58.946 47.619 9.73 0.00 0.00 2.32
574 575 1.956477 AGAACTTTGCGCTGGTCAATT 59.044 42.857 9.73 0.00 0.00 2.32
575 576 1.537202 GAGAACTTTGCGCTGGTCAAT 59.463 47.619 9.73 0.00 0.00 2.57
576 577 0.944386 GAGAACTTTGCGCTGGTCAA 59.056 50.000 9.73 0.00 0.00 3.18
577 578 0.106708 AGAGAACTTTGCGCTGGTCA 59.893 50.000 9.73 0.00 0.00 4.02
578 579 1.069636 CAAGAGAACTTTGCGCTGGTC 60.070 52.381 9.73 7.28 33.70 4.02
579 580 0.947244 CAAGAGAACTTTGCGCTGGT 59.053 50.000 9.73 1.34 33.70 4.00
580 581 0.386478 GCAAGAGAACTTTGCGCTGG 60.386 55.000 9.73 0.61 33.70 4.85
581 582 0.386478 GGCAAGAGAACTTTGCGCTG 60.386 55.000 9.73 0.99 33.70 5.18
582 583 0.819259 TGGCAAGAGAACTTTGCGCT 60.819 50.000 9.73 0.00 33.70 5.92
583 584 0.242017 ATGGCAAGAGAACTTTGCGC 59.758 50.000 0.00 0.00 33.70 6.09
584 585 2.322161 CAATGGCAAGAGAACTTTGCG 58.678 47.619 0.00 0.00 33.70 4.85
585 586 2.680577 CCAATGGCAAGAGAACTTTGC 58.319 47.619 0.00 1.53 33.70 3.68
599 600 1.826720 ACTGTAAATGGCAGCCAATGG 59.173 47.619 20.84 8.31 36.95 3.16
600 601 3.947196 TCTACTGTAAATGGCAGCCAATG 59.053 43.478 20.84 7.61 36.95 2.82
601 602 3.947834 GTCTACTGTAAATGGCAGCCAAT 59.052 43.478 20.84 7.38 36.95 3.16
602 603 3.343617 GTCTACTGTAAATGGCAGCCAA 58.656 45.455 20.84 0.00 36.95 4.52
603 604 2.676750 CGTCTACTGTAAATGGCAGCCA 60.677 50.000 18.99 18.99 37.47 4.75
604 605 1.933853 CGTCTACTGTAAATGGCAGCC 59.066 52.381 3.66 3.66 37.47 4.85
605 606 2.603560 GACGTCTACTGTAAATGGCAGC 59.396 50.000 8.70 0.00 37.47 5.25
606 607 3.187700 GGACGTCTACTGTAAATGGCAG 58.812 50.000 16.46 0.00 39.67 4.85
607 608 2.416296 CGGACGTCTACTGTAAATGGCA 60.416 50.000 16.46 0.00 0.00 4.92
608 609 2.190981 CGGACGTCTACTGTAAATGGC 58.809 52.381 16.46 0.00 0.00 4.40
609 610 2.159282 AGCGGACGTCTACTGTAAATGG 60.159 50.000 16.46 0.00 0.00 3.16
610 611 2.852413 CAGCGGACGTCTACTGTAAATG 59.148 50.000 22.34 5.02 0.00 2.32
611 612 2.751259 TCAGCGGACGTCTACTGTAAAT 59.249 45.455 26.49 0.71 0.00 1.40
612 613 2.095567 GTCAGCGGACGTCTACTGTAAA 60.096 50.000 26.49 13.11 33.68 2.01
613 614 1.466167 GTCAGCGGACGTCTACTGTAA 59.534 52.381 26.49 13.63 33.68 2.41
614 615 1.081892 GTCAGCGGACGTCTACTGTA 58.918 55.000 26.49 16.36 33.68 2.74
615 616 1.874562 GTCAGCGGACGTCTACTGT 59.125 57.895 26.49 4.91 33.68 3.55
616 617 4.767633 GTCAGCGGACGTCTACTG 57.232 61.111 23.77 23.77 33.68 2.74
624 625 1.589196 GCTATCCACGTCAGCGGAC 60.589 63.158 6.95 6.95 43.45 4.79
625 626 2.049767 TGCTATCCACGTCAGCGGA 61.050 57.895 0.00 0.00 43.45 5.54
626 627 1.878522 GTGCTATCCACGTCAGCGG 60.879 63.158 0.00 0.00 43.45 5.52
627 628 3.693245 GTGCTATCCACGTCAGCG 58.307 61.111 0.00 0.00 44.93 5.18
634 635 1.276844 GAATGCGCGTGCTATCCAC 59.723 57.895 23.16 4.16 43.34 4.02
635 636 1.153469 TGAATGCGCGTGCTATCCA 60.153 52.632 23.16 11.62 43.34 3.41
636 637 1.276844 GTGAATGCGCGTGCTATCC 59.723 57.895 23.16 9.14 43.34 2.59
637 638 1.276844 GGTGAATGCGCGTGCTATC 59.723 57.895 23.16 19.17 43.34 2.08
638 639 2.180204 GGGTGAATGCGCGTGCTAT 61.180 57.895 23.16 10.75 43.34 2.97
639 640 2.817834 GGGTGAATGCGCGTGCTA 60.818 61.111 23.16 9.04 43.34 3.49
642 643 3.039202 GAAGGGGTGAATGCGCGTG 62.039 63.158 8.43 0.00 0.00 5.34
643 644 2.746277 GAAGGGGTGAATGCGCGT 60.746 61.111 8.43 0.00 0.00 6.01
644 645 3.508840 GGAAGGGGTGAATGCGCG 61.509 66.667 0.00 0.00 0.00 6.86
645 646 3.508840 CGGAAGGGGTGAATGCGC 61.509 66.667 0.00 0.00 0.00 6.09
646 647 3.508840 GCGGAAGGGGTGAATGCG 61.509 66.667 0.00 0.00 0.00 4.73
647 648 3.508840 CGCGGAAGGGGTGAATGC 61.509 66.667 0.00 0.00 40.85 3.56
656 657 1.217882 CCAATAAGCTACGCGGAAGG 58.782 55.000 12.47 0.00 0.00 3.46
657 658 1.217882 CCCAATAAGCTACGCGGAAG 58.782 55.000 12.47 8.91 0.00 3.46
658 659 0.538118 ACCCAATAAGCTACGCGGAA 59.462 50.000 12.47 0.00 0.00 4.30
659 660 0.538118 AACCCAATAAGCTACGCGGA 59.462 50.000 12.47 0.00 0.00 5.54
660 661 1.063469 CAAACCCAATAAGCTACGCGG 59.937 52.381 12.47 0.00 0.00 6.46
661 662 2.004017 TCAAACCCAATAAGCTACGCG 58.996 47.619 3.53 3.53 0.00 6.01
662 663 4.142469 ACAATCAAACCCAATAAGCTACGC 60.142 41.667 0.00 0.00 0.00 4.42
663 664 5.560966 ACAATCAAACCCAATAAGCTACG 57.439 39.130 0.00 0.00 0.00 3.51
664 665 7.968405 CAGTTACAATCAAACCCAATAAGCTAC 59.032 37.037 0.00 0.00 0.00 3.58
665 666 7.668052 ACAGTTACAATCAAACCCAATAAGCTA 59.332 33.333 0.00 0.00 0.00 3.32
666 667 6.493458 ACAGTTACAATCAAACCCAATAAGCT 59.507 34.615 0.00 0.00 0.00 3.74
667 668 6.687604 ACAGTTACAATCAAACCCAATAAGC 58.312 36.000 0.00 0.00 0.00 3.09
668 669 8.110860 AGACAGTTACAATCAAACCCAATAAG 57.889 34.615 0.00 0.00 0.00 1.73
669 670 9.005777 GTAGACAGTTACAATCAAACCCAATAA 57.994 33.333 0.00 0.00 0.00 1.40
670 671 8.380099 AGTAGACAGTTACAATCAAACCCAATA 58.620 33.333 0.00 0.00 0.00 1.90
671 672 7.174946 CAGTAGACAGTTACAATCAAACCCAAT 59.825 37.037 0.00 0.00 0.00 3.16
672 673 6.485313 CAGTAGACAGTTACAATCAAACCCAA 59.515 38.462 0.00 0.00 0.00 4.12
673 674 5.995282 CAGTAGACAGTTACAATCAAACCCA 59.005 40.000 0.00 0.00 0.00 4.51
674 675 6.228258 TCAGTAGACAGTTACAATCAAACCC 58.772 40.000 0.00 0.00 0.00 4.11
675 676 7.724305 TTCAGTAGACAGTTACAATCAAACC 57.276 36.000 0.00 0.00 0.00 3.27
679 680 9.639601 CACTAATTCAGTAGACAGTTACAATCA 57.360 33.333 0.00 0.00 34.98 2.57
680 681 9.856488 TCACTAATTCAGTAGACAGTTACAATC 57.144 33.333 0.00 0.00 34.98 2.67
824 827 4.571919 CCGGAGTTGTATCCACTGTTAAA 58.428 43.478 0.00 0.00 39.53 1.52
831 834 0.179081 GGAGCCGGAGTTGTATCCAC 60.179 60.000 5.05 0.00 39.53 4.02
848 851 2.927477 GACTTTTGCGATCACGTATGGA 59.073 45.455 0.00 0.00 41.98 3.41
930 933 0.596600 TTGAACGTCTCCGCTGTCAC 60.597 55.000 0.00 0.00 37.70 3.67
931 934 0.596600 GTTGAACGTCTCCGCTGTCA 60.597 55.000 0.00 0.00 37.70 3.58
996 1000 3.082579 AAGCCGCTCCTCCATCGTC 62.083 63.158 0.00 0.00 0.00 4.20
1132 1136 4.047125 CCCAGGTGGCGGTGGAAT 62.047 66.667 1.38 0.00 35.67 3.01
1374 1378 1.879575 TCTTGGTGATCTCCCCGATT 58.120 50.000 11.24 0.00 30.84 3.34
1430 1448 1.946475 GAGGAGCTAGGAAACGGCGT 61.946 60.000 6.77 6.77 38.58 5.68
1444 1462 1.664659 CTGCGCTTGATCAAAGAGGAG 59.335 52.381 9.73 11.51 44.98 3.69
1493 3329 5.683876 ATTAATGTACTCTGCTCTGTGGT 57.316 39.130 0.00 0.00 0.00 4.16
1506 3342 3.473625 AGGCCGGCTACAATTAATGTAC 58.526 45.455 28.56 3.63 43.63 2.90
1509 3345 2.687935 ACAAGGCCGGCTACAATTAATG 59.312 45.455 28.56 13.64 0.00 1.90
1510 3346 3.012934 ACAAGGCCGGCTACAATTAAT 57.987 42.857 28.56 0.00 0.00 1.40
1511 3347 2.500392 ACAAGGCCGGCTACAATTAA 57.500 45.000 28.56 0.00 0.00 1.40
1526 3365 2.416547 CACATCGGCTTGAACCTACAAG 59.583 50.000 0.00 0.00 46.69 3.16
1571 3410 3.934391 GACCTCGGCGACCAAGGTG 62.934 68.421 21.31 3.23 41.69 4.00
1625 3464 1.210155 GAGCCATGTCACAAACGCC 59.790 57.895 0.00 0.00 0.00 5.68
1688 3527 0.818296 ATCAGGGAGACGTTTCCGAG 59.182 55.000 18.10 12.96 38.17 4.63
1728 3567 9.877222 TCATCCACCTGAAGAATAATAGTACTA 57.123 33.333 4.77 4.77 0.00 1.82
1729 3568 8.783660 TCATCCACCTGAAGAATAATAGTACT 57.216 34.615 0.00 0.00 0.00 2.73
1733 3572 8.737168 TTGTTCATCCACCTGAAGAATAATAG 57.263 34.615 0.00 0.00 34.56 1.73
1765 3604 0.884704 GGCCAGTCGAAGTGCTTCAA 60.885 55.000 11.82 0.00 39.46 2.69
1842 3681 3.118038 AGGACGAGATCTGCTTCTCTAGT 60.118 47.826 0.00 3.80 40.03 2.57
1857 3696 0.248134 GGTCATCGACGAAGGACGAG 60.248 60.000 20.06 0.68 45.77 4.18
1988 3829 7.476540 AATAAACAGGACAGGGGAATTTTAC 57.523 36.000 0.00 0.00 0.00 2.01
2003 3844 8.669243 GTTCTGAGAAGTGGAATAATAAACAGG 58.331 37.037 0.00 0.00 0.00 4.00
2181 4022 6.758416 CACAATGCTATTAGAGTAACAGCTCA 59.242 38.462 0.00 0.00 37.94 4.26
2266 4107 3.726517 CGCCAACTTGACCTGCGG 61.727 66.667 0.00 0.00 41.42 5.69
2473 4323 4.096984 AGACCTAAAACCGTCCTATGTACG 59.903 45.833 0.00 0.00 40.01 3.67
2474 4324 5.588958 AGACCTAAAACCGTCCTATGTAC 57.411 43.478 0.00 0.00 0.00 2.90
2484 4334 8.992835 AGTAGTATGTAAAAGACCTAAAACCG 57.007 34.615 0.00 0.00 0.00 4.44
2582 4433 4.320494 CGTTTTAGCTCATCAAAAGCACCT 60.320 41.667 0.00 0.00 42.35 4.00
2655 4506 2.555199 CCTTAGAGATGTTGGAAGCGG 58.445 52.381 0.00 0.00 0.00 5.52
2780 4635 6.620877 AAATGAATCCTAAGGGGGAAAAAC 57.379 37.500 0.00 0.00 39.02 2.43
2786 4641 9.907229 GAATAGTATAAATGAATCCTAAGGGGG 57.093 37.037 0.00 0.00 35.33 5.40
2870 4725 6.840780 AAGACAAGAATTCAGGGTATTTGG 57.159 37.500 8.44 0.00 0.00 3.28
2877 4732 6.418101 TCCTGATTAAGACAAGAATTCAGGG 58.582 40.000 8.44 0.00 41.63 4.45
2879 4734 7.416022 GCATCCTGATTAAGACAAGAATTCAG 58.584 38.462 8.44 2.21 0.00 3.02
2892 4747 5.698104 AGAATGTCATGGCATCCTGATTAA 58.302 37.500 14.31 0.00 0.00 1.40
2957 4815 3.261643 CAGCTTTAAGGCCCCTTTGATTT 59.738 43.478 5.87 0.00 37.47 2.17
3021 4879 6.049955 TCCTACTGAAATTTCGGAACTGAT 57.950 37.500 29.48 11.49 37.03 2.90
3217 5118 0.808125 TTGAAGTGTGCGTGCTTGTT 59.192 45.000 0.00 0.00 0.00 2.83
3303 5208 3.541713 GAGCTTCCCGGCCGATCT 61.542 66.667 30.73 15.27 0.00 2.75
3508 5413 4.821589 CAAGAGCGGGGCGAGGAC 62.822 72.222 0.00 0.00 0.00 3.85
3561 5466 4.530857 CCCGAGACGATGGCCACC 62.531 72.222 8.16 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.