Multiple sequence alignment - TraesCS3B01G260200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G260200 chr3B 100.000 3924 0 0 1 3924 417956393 417960316 0.000000e+00 7247.0
1 TraesCS3B01G260200 chr3B 82.005 778 103 18 3128 3883 730935240 730936002 9.260000e-176 627.0
2 TraesCS3B01G260200 chr3B 95.122 41 2 0 3085 3125 11177599 11177559 9.100000e-07 65.8
3 TraesCS3B01G260200 chr3A 94.331 1376 45 13 727 2069 431071287 431072662 0.000000e+00 2078.0
4 TraesCS3B01G260200 chr3A 94.415 949 44 3 2168 3114 431073792 431074733 0.000000e+00 1450.0
5 TraesCS3B01G260200 chr3A 88.649 185 15 2 2315 2499 668638227 668638405 1.840000e-53 220.0
6 TraesCS3B01G260200 chr3A 86.170 188 20 2 2315 2502 718742105 718741924 8.600000e-47 198.0
7 TraesCS3B01G260200 chr3A 95.455 44 2 0 3085 3128 515730039 515729996 1.960000e-08 71.3
8 TraesCS3B01G260200 chr3D 94.087 1336 46 11 727 2030 303466466 303465132 0.000000e+00 1999.0
9 TraesCS3B01G260200 chr3D 94.641 1045 36 9 2054 3093 303464015 303462986 0.000000e+00 1602.0
10 TraesCS3B01G260200 chr3D 98.333 60 1 0 2000 2059 303465130 303465071 5.360000e-19 106.0
11 TraesCS3B01G260200 chr3D 93.182 44 3 0 3085 3128 525918838 525918795 9.100000e-07 65.8
12 TraesCS3B01G260200 chr1A 92.801 764 43 9 3129 3883 533155912 533156672 0.000000e+00 1096.0
13 TraesCS3B01G260200 chr1A 92.047 767 34 14 3130 3883 520825567 520826319 0.000000e+00 1053.0
14 TraesCS3B01G260200 chr1A 78.495 558 73 24 3291 3829 490135137 490135666 4.890000e-84 322.0
15 TraesCS3B01G260200 chr1A 86.634 202 21 6 527 726 13851247 13851444 6.600000e-53 219.0
16 TraesCS3B01G260200 chr1A 85.514 214 22 5 520 726 551528249 551528460 8.540000e-52 215.0
17 TraesCS3B01G260200 chr1A 85.294 204 22 5 527 724 463352162 463351961 1.850000e-48 204.0
18 TraesCS3B01G260200 chr1A 85.946 185 20 2 2315 2499 343963378 343963556 4.000000e-45 193.0
19 TraesCS3B01G260200 chr1A 80.909 220 27 12 229 445 9656118 9656325 4.060000e-35 159.0
20 TraesCS3B01G260200 chr1B 92.408 764 45 10 3129 3883 20829620 20830379 0.000000e+00 1077.0
21 TraesCS3B01G260200 chr1B 80.805 646 90 24 3254 3883 315537520 315536893 3.550000e-130 475.0
22 TraesCS3B01G260200 chr1B 79.348 368 49 16 92 445 361170855 361170501 2.360000e-57 233.0
23 TraesCS3B01G260200 chr1B 87.745 204 20 4 527 726 597105599 597105801 2.360000e-57 233.0
24 TraesCS3B01G260200 chr1B 95.122 41 2 0 3085 3125 667308862 667308902 9.100000e-07 65.8
25 TraesCS3B01G260200 chr6A 85.493 710 49 19 3136 3799 202371834 202372535 0.000000e+00 691.0
26 TraesCS3B01G260200 chr7D 81.371 569 68 10 3131 3682 563763405 563762858 2.800000e-116 429.0
27 TraesCS3B01G260200 chr7D 84.977 213 15 9 525 725 161536809 161536602 2.390000e-47 200.0
28 TraesCS3B01G260200 chr7D 82.833 233 26 12 192 420 482242323 482242545 3.090000e-46 196.0
29 TraesCS3B01G260200 chr2A 81.584 505 76 10 3124 3618 764228549 764229046 6.110000e-108 401.0
30 TraesCS3B01G260200 chr2A 85.405 185 21 2 2315 2499 469876390 469876568 1.860000e-43 187.0
31 TraesCS3B01G260200 chr2A 77.912 249 51 4 1663 1909 211694959 211694713 6.790000e-33 152.0
32 TraesCS3B01G260200 chr5D 84.530 362 41 5 92 443 422335955 422336311 1.040000e-90 344.0
33 TraesCS3B01G260200 chr5D 81.395 215 31 8 117 325 485203143 485202932 2.430000e-37 167.0
34 TraesCS3B01G260200 chr5D 75.000 268 65 2 1605 1871 510058795 510059061 5.320000e-24 122.0
35 TraesCS3B01G260200 chr5D 87.640 89 11 0 5 93 514144104 514144192 1.930000e-18 104.0
36 TraesCS3B01G260200 chr4D 81.099 455 49 19 1 445 66651880 66651453 2.920000e-86 329.0
37 TraesCS3B01G260200 chr4D 86.408 206 21 3 527 726 65099861 65099657 6.600000e-53 219.0
38 TraesCS3B01G260200 chr7B 87.037 270 22 7 3129 3391 434919233 434918970 3.840000e-75 292.0
39 TraesCS3B01G260200 chr7B 84.762 210 24 4 527 729 731103170 731102962 1.850000e-48 204.0
40 TraesCS3B01G260200 chr7B 80.734 218 29 11 201 415 25677518 25677311 1.460000e-34 158.0
41 TraesCS3B01G260200 chr7B 87.640 89 11 0 3795 3883 434918478 434918390 1.930000e-18 104.0
42 TraesCS3B01G260200 chr2D 88.517 209 16 5 525 726 629389210 629389417 3.030000e-61 246.0
43 TraesCS3B01G260200 chr2D 80.519 308 41 15 146 443 108912922 108913220 6.600000e-53 219.0
44 TraesCS3B01G260200 chr2D 74.916 299 71 4 1613 1909 196130844 196130548 2.460000e-27 134.0
45 TraesCS3B01G260200 chr2D 80.916 131 25 0 1695 1825 196224306 196224176 1.930000e-18 104.0
46 TraesCS3B01G260200 chr2D 84.416 77 5 4 3129 3198 650644711 650644787 7.040000e-08 69.4
47 TraesCS3B01G260200 chr2D 93.023 43 3 0 3085 3127 17466095 17466137 3.270000e-06 63.9
48 TraesCS3B01G260200 chr6D 88.152 211 15 4 527 730 456277486 456277693 3.920000e-60 243.0
49 TraesCS3B01G260200 chr6D 81.124 249 30 14 195 437 263235960 263236197 2.410000e-42 183.0
50 TraesCS3B01G260200 chr4B 79.853 273 35 13 191 457 142039374 142039116 8.660000e-42 182.0
51 TraesCS3B01G260200 chr5B 76.950 282 61 4 2382 2661 641043561 641043840 1.460000e-34 158.0
52 TraesCS3B01G260200 chr5B 80.503 159 29 2 1714 1871 641043299 641043456 1.920000e-23 121.0
53 TraesCS3B01G260200 chr5B 89.091 55 4 2 3071 3125 711283397 711283345 2.530000e-07 67.6
54 TraesCS3B01G260200 chr2B 81.679 131 24 0 1695 1825 252977022 252976892 4.150000e-20 110.0
55 TraesCS3B01G260200 chrUn 93.478 46 2 1 1725 1770 99864111 99864155 2.530000e-07 67.6
56 TraesCS3B01G260200 chr4A 95.122 41 2 0 3085 3125 216149175 216149215 9.100000e-07 65.8
57 TraesCS3B01G260200 chr4A 93.182 44 2 1 3086 3128 552830919 552830962 3.270000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G260200 chr3B 417956393 417960316 3923 False 7247.000000 7247 100.000 1 3924 1 chr3B.!!$F1 3923
1 TraesCS3B01G260200 chr3B 730935240 730936002 762 False 627.000000 627 82.005 3128 3883 1 chr3B.!!$F2 755
2 TraesCS3B01G260200 chr3A 431071287 431074733 3446 False 1764.000000 2078 94.373 727 3114 2 chr3A.!!$F2 2387
3 TraesCS3B01G260200 chr3D 303462986 303466466 3480 True 1235.666667 1999 95.687 727 3093 3 chr3D.!!$R2 2366
4 TraesCS3B01G260200 chr1A 533155912 533156672 760 False 1096.000000 1096 92.801 3129 3883 1 chr1A.!!$F6 754
5 TraesCS3B01G260200 chr1A 520825567 520826319 752 False 1053.000000 1053 92.047 3130 3883 1 chr1A.!!$F5 753
6 TraesCS3B01G260200 chr1A 490135137 490135666 529 False 322.000000 322 78.495 3291 3829 1 chr1A.!!$F4 538
7 TraesCS3B01G260200 chr1B 20829620 20830379 759 False 1077.000000 1077 92.408 3129 3883 1 chr1B.!!$F1 754
8 TraesCS3B01G260200 chr1B 315536893 315537520 627 True 475.000000 475 80.805 3254 3883 1 chr1B.!!$R1 629
9 TraesCS3B01G260200 chr6A 202371834 202372535 701 False 691.000000 691 85.493 3136 3799 1 chr6A.!!$F1 663
10 TraesCS3B01G260200 chr7D 563762858 563763405 547 True 429.000000 429 81.371 3131 3682 1 chr7D.!!$R2 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
454 455 0.029167 GACGCTCTAACCTAGTCGCC 59.971 60.0 0.00 0.0 0.00 5.54 F
473 474 0.036952 CTTGGGAGTCGTCTGTGCAT 60.037 55.0 0.00 0.0 0.00 3.96 F
526 527 0.037046 GGCCCAACAAAGCCTTGATG 60.037 55.0 1.09 0.0 46.14 3.07 F
541 542 0.247460 TGATGGACGAGACTTGCCTG 59.753 55.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2357 4520 1.153353 GGCAACGCACAGCTTAGTTA 58.847 50.000 0.0 0.0 0.00 2.24 R
2595 4758 1.801309 CTCGATCTCCGGGAAGAGCC 61.801 65.000 0.0 0.0 42.61 4.70 R
2620 4783 4.316823 ACCTCCACCTCCCGCAGA 62.317 66.667 0.0 0.0 0.00 4.26 R
2992 5155 6.239217 TCATGCATAGTGATTTACTCCACT 57.761 37.500 0.0 0.0 44.81 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.027460 CACTGCCGCCAACCAAAC 59.973 61.111 0.00 0.00 0.00 2.93
18 19 2.123897 ACTGCCGCCAACCAAACT 60.124 55.556 0.00 0.00 0.00 2.66
19 20 2.193536 ACTGCCGCCAACCAAACTC 61.194 57.895 0.00 0.00 0.00 3.01
20 21 3.254014 CTGCCGCCAACCAAACTCG 62.254 63.158 0.00 0.00 0.00 4.18
21 22 3.284449 GCCGCCAACCAAACTCGT 61.284 61.111 0.00 0.00 0.00 4.18
22 23 2.943653 CCGCCAACCAAACTCGTC 59.056 61.111 0.00 0.00 0.00 4.20
23 24 2.613506 CCGCCAACCAAACTCGTCC 61.614 63.158 0.00 0.00 0.00 4.79
24 25 2.943653 GCCAACCAAACTCGTCCG 59.056 61.111 0.00 0.00 0.00 4.79
25 26 2.943653 CCAACCAAACTCGTCCGC 59.056 61.111 0.00 0.00 0.00 5.54
26 27 2.613506 CCAACCAAACTCGTCCGCC 61.614 63.158 0.00 0.00 0.00 6.13
27 28 1.890041 CAACCAAACTCGTCCGCCA 60.890 57.895 0.00 0.00 0.00 5.69
28 29 1.153127 AACCAAACTCGTCCGCCAA 60.153 52.632 0.00 0.00 0.00 4.52
29 30 1.164041 AACCAAACTCGTCCGCCAAG 61.164 55.000 0.00 0.00 0.00 3.61
30 31 2.325082 CCAAACTCGTCCGCCAAGG 61.325 63.158 0.00 0.00 42.97 3.61
31 32 2.668550 AAACTCGTCCGCCAAGGC 60.669 61.111 0.00 0.00 40.77 4.35
50 51 2.933287 CCCCAGGGCAGGTGTGTA 60.933 66.667 0.00 0.00 0.00 2.90
51 52 2.671070 CCCAGGGCAGGTGTGTAG 59.329 66.667 0.00 0.00 0.00 2.74
52 53 2.045926 CCAGGGCAGGTGTGTAGC 60.046 66.667 0.00 0.00 0.00 3.58
53 54 2.749682 CAGGGCAGGTGTGTAGCA 59.250 61.111 0.00 0.00 0.00 3.49
54 55 1.073025 CAGGGCAGGTGTGTAGCAA 59.927 57.895 0.00 0.00 0.00 3.91
55 56 0.957395 CAGGGCAGGTGTGTAGCAAG 60.957 60.000 0.00 0.00 0.00 4.01
56 57 1.675641 GGGCAGGTGTGTAGCAAGG 60.676 63.158 0.00 0.00 0.00 3.61
57 58 1.374947 GGCAGGTGTGTAGCAAGGA 59.625 57.895 0.00 0.00 0.00 3.36
58 59 0.955919 GGCAGGTGTGTAGCAAGGAC 60.956 60.000 0.00 0.00 0.00 3.85
59 60 1.291877 GCAGGTGTGTAGCAAGGACG 61.292 60.000 0.00 0.00 0.00 4.79
60 61 0.670546 CAGGTGTGTAGCAAGGACGG 60.671 60.000 0.00 0.00 0.00 4.79
61 62 2.033194 GGTGTGTAGCAAGGACGGC 61.033 63.158 0.00 0.00 0.00 5.68
62 63 2.048597 TGTGTAGCAAGGACGGCG 60.049 61.111 4.80 4.80 36.08 6.46
63 64 2.260434 GTGTAGCAAGGACGGCGA 59.740 61.111 16.62 0.00 36.08 5.54
64 65 2.092882 GTGTAGCAAGGACGGCGAC 61.093 63.158 16.62 7.58 37.39 5.19
76 77 3.479269 GGCGACGGCGTGAAGAAG 61.479 66.667 21.19 2.40 41.24 2.85
77 78 2.733593 GCGACGGCGTGAAGAAGT 60.734 61.111 21.19 0.00 40.36 3.01
78 79 1.443194 GCGACGGCGTGAAGAAGTA 60.443 57.895 21.19 0.00 40.36 2.24
79 80 1.403972 GCGACGGCGTGAAGAAGTAG 61.404 60.000 21.19 0.00 40.36 2.57
80 81 0.797249 CGACGGCGTGAAGAAGTAGG 60.797 60.000 21.19 0.00 0.00 3.18
81 82 0.524862 GACGGCGTGAAGAAGTAGGA 59.475 55.000 21.19 0.00 0.00 2.94
82 83 0.526662 ACGGCGTGAAGAAGTAGGAG 59.473 55.000 13.76 0.00 0.00 3.69
83 84 0.179134 CGGCGTGAAGAAGTAGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
84 85 1.183549 GGCGTGAAGAAGTAGGAGGA 58.816 55.000 0.00 0.00 0.00 3.71
85 86 1.135053 GGCGTGAAGAAGTAGGAGGAC 60.135 57.143 0.00 0.00 0.00 3.85
86 87 1.467713 GCGTGAAGAAGTAGGAGGACG 60.468 57.143 0.00 0.00 0.00 4.79
87 88 2.082231 CGTGAAGAAGTAGGAGGACGA 58.918 52.381 0.00 0.00 0.00 4.20
88 89 2.159544 CGTGAAGAAGTAGGAGGACGAC 60.160 54.545 0.00 0.00 0.00 4.34
89 90 2.082231 TGAAGAAGTAGGAGGACGACG 58.918 52.381 0.00 0.00 0.00 5.12
90 91 1.401199 GAAGAAGTAGGAGGACGACGG 59.599 57.143 0.00 0.00 0.00 4.79
91 92 1.031029 AGAAGTAGGAGGACGACGGC 61.031 60.000 0.00 0.00 0.00 5.68
92 93 2.320339 GAAGTAGGAGGACGACGGCG 62.320 65.000 10.39 10.39 44.79 6.46
93 94 3.885521 GTAGGAGGACGACGGCGG 61.886 72.222 18.49 0.00 43.17 6.13
109 110 3.479269 GGCGACGGCGTGAAGAAG 61.479 66.667 21.19 2.40 41.24 2.85
110 111 3.479269 GCGACGGCGTGAAGAAGG 61.479 66.667 21.19 0.00 40.36 3.46
111 112 2.257371 CGACGGCGTGAAGAAGGA 59.743 61.111 21.19 0.00 0.00 3.36
112 113 1.801913 CGACGGCGTGAAGAAGGAG 60.802 63.158 21.19 0.00 0.00 3.69
113 114 1.446272 GACGGCGTGAAGAAGGAGG 60.446 63.158 21.19 0.00 0.00 4.30
114 115 1.874345 GACGGCGTGAAGAAGGAGGA 61.874 60.000 21.19 0.00 0.00 3.71
115 116 1.153745 CGGCGTGAAGAAGGAGGAG 60.154 63.158 0.00 0.00 0.00 3.69
116 117 1.219393 GGCGTGAAGAAGGAGGAGG 59.781 63.158 0.00 0.00 0.00 4.30
117 118 1.258445 GGCGTGAAGAAGGAGGAGGA 61.258 60.000 0.00 0.00 0.00 3.71
118 119 0.108567 GCGTGAAGAAGGAGGAGGAC 60.109 60.000 0.00 0.00 0.00 3.85
119 120 0.171455 CGTGAAGAAGGAGGAGGACG 59.829 60.000 0.00 0.00 0.00 4.79
120 121 1.546961 GTGAAGAAGGAGGAGGACGA 58.453 55.000 0.00 0.00 0.00 4.20
121 122 1.202817 GTGAAGAAGGAGGAGGACGAC 59.797 57.143 0.00 0.00 0.00 4.34
122 123 0.452585 GAAGAAGGAGGAGGACGACG 59.547 60.000 0.00 0.00 0.00 5.12
123 124 0.966370 AAGAAGGAGGAGGACGACGG 60.966 60.000 0.00 0.00 0.00 4.79
124 125 3.066233 GAAGGAGGAGGACGACGGC 62.066 68.421 0.00 0.00 0.00 5.68
125 126 3.881019 AAGGAGGAGGACGACGGCA 62.881 63.158 1.63 0.00 0.00 5.69
126 127 3.827898 GGAGGAGGACGACGGCAG 61.828 72.222 1.63 0.00 0.00 4.85
127 128 4.500116 GAGGAGGACGACGGCAGC 62.500 72.222 1.63 0.00 0.00 5.25
133 134 3.764049 GACGACGGCAGCGACAAC 61.764 66.667 0.00 0.00 0.00 3.32
134 135 4.578898 ACGACGGCAGCGACAACA 62.579 61.111 0.00 0.00 0.00 3.33
135 136 3.767230 CGACGGCAGCGACAACAG 61.767 66.667 0.00 0.00 0.00 3.16
136 137 4.077188 GACGGCAGCGACAACAGC 62.077 66.667 0.00 0.00 0.00 4.40
144 145 3.777925 CGACAACAGCGCCTTCGG 61.778 66.667 2.29 0.00 35.95 4.30
145 146 4.090057 GACAACAGCGCCTTCGGC 62.090 66.667 2.29 0.00 46.75 5.54
155 156 4.018609 CCTTCGGCATGCTCTACG 57.981 61.111 18.92 12.71 0.00 3.51
156 157 1.592669 CCTTCGGCATGCTCTACGG 60.593 63.158 18.92 8.30 0.00 4.02
157 158 2.202878 TTCGGCATGCTCTACGGC 60.203 61.111 18.92 0.00 0.00 5.68
158 159 3.733344 TTCGGCATGCTCTACGGCC 62.733 63.158 18.92 0.00 42.98 6.13
159 160 4.227134 CGGCATGCTCTACGGCCT 62.227 66.667 18.92 0.00 44.23 5.19
160 161 2.590007 GGCATGCTCTACGGCCTG 60.590 66.667 18.92 0.00 43.09 4.85
161 162 2.187946 GCATGCTCTACGGCCTGT 59.812 61.111 11.37 2.95 32.00 4.00
162 163 1.441729 GCATGCTCTACGGCCTGTA 59.558 57.895 11.37 4.13 32.00 2.74
174 175 2.187946 CCTGTAGAAGGGGCAGCG 59.812 66.667 0.00 0.00 43.15 5.18
175 176 2.187946 CTGTAGAAGGGGCAGCGG 59.812 66.667 0.00 0.00 0.00 5.52
176 177 2.284331 TGTAGAAGGGGCAGCGGA 60.284 61.111 0.00 0.00 0.00 5.54
177 178 2.187163 GTAGAAGGGGCAGCGGAC 59.813 66.667 0.00 0.00 0.00 4.79
178 179 3.458163 TAGAAGGGGCAGCGGACG 61.458 66.667 0.00 0.00 0.00 4.79
190 191 3.261951 CGGACGGTGGCGCAATAG 61.262 66.667 10.83 0.00 0.00 1.73
191 192 2.125269 GGACGGTGGCGCAATAGT 60.125 61.111 10.83 1.43 0.00 2.12
192 193 1.743995 GGACGGTGGCGCAATAGTT 60.744 57.895 10.83 0.00 0.00 2.24
193 194 1.303091 GGACGGTGGCGCAATAGTTT 61.303 55.000 10.83 0.00 0.00 2.66
194 195 0.519961 GACGGTGGCGCAATAGTTTT 59.480 50.000 10.83 0.00 0.00 2.43
195 196 1.733360 GACGGTGGCGCAATAGTTTTA 59.267 47.619 10.83 0.00 0.00 1.52
196 197 1.735571 ACGGTGGCGCAATAGTTTTAG 59.264 47.619 10.83 0.00 0.00 1.85
197 198 1.735571 CGGTGGCGCAATAGTTTTAGT 59.264 47.619 10.83 0.00 0.00 2.24
198 199 2.160813 CGGTGGCGCAATAGTTTTAGTT 59.839 45.455 10.83 0.00 0.00 2.24
199 200 3.371591 CGGTGGCGCAATAGTTTTAGTTA 59.628 43.478 10.83 0.00 0.00 2.24
200 201 4.034742 CGGTGGCGCAATAGTTTTAGTTAT 59.965 41.667 10.83 0.00 0.00 1.89
201 202 5.270853 GGTGGCGCAATAGTTTTAGTTATG 58.729 41.667 10.83 0.00 0.00 1.90
202 203 5.163693 GGTGGCGCAATAGTTTTAGTTATGT 60.164 40.000 10.83 0.00 0.00 2.29
203 204 6.319399 GTGGCGCAATAGTTTTAGTTATGTT 58.681 36.000 10.83 0.00 0.00 2.71
204 205 6.804783 GTGGCGCAATAGTTTTAGTTATGTTT 59.195 34.615 10.83 0.00 0.00 2.83
205 206 7.327518 GTGGCGCAATAGTTTTAGTTATGTTTT 59.672 33.333 10.83 0.00 0.00 2.43
206 207 7.868415 TGGCGCAATAGTTTTAGTTATGTTTTT 59.132 29.630 10.83 0.00 0.00 1.94
207 208 9.344309 GGCGCAATAGTTTTAGTTATGTTTTTA 57.656 29.630 10.83 0.00 0.00 1.52
251 252 9.891828 TTATGTACAAATATCAATGAAATCGCC 57.108 29.630 0.00 0.00 0.00 5.54
252 253 7.566760 TGTACAAATATCAATGAAATCGCCT 57.433 32.000 0.00 0.00 0.00 5.52
253 254 8.669946 TGTACAAATATCAATGAAATCGCCTA 57.330 30.769 0.00 0.00 0.00 3.93
254 255 8.773645 TGTACAAATATCAATGAAATCGCCTAG 58.226 33.333 0.00 0.00 0.00 3.02
255 256 7.807977 ACAAATATCAATGAAATCGCCTAGT 57.192 32.000 0.00 0.00 0.00 2.57
256 257 8.225603 ACAAATATCAATGAAATCGCCTAGTT 57.774 30.769 0.00 0.00 0.00 2.24
257 258 8.686334 ACAAATATCAATGAAATCGCCTAGTTT 58.314 29.630 0.00 0.00 0.00 2.66
258 259 8.961092 CAAATATCAATGAAATCGCCTAGTTTG 58.039 33.333 0.00 0.00 0.00 2.93
259 260 8.450578 AATATCAATGAAATCGCCTAGTTTGA 57.549 30.769 0.00 0.00 0.00 2.69
260 261 5.545658 TCAATGAAATCGCCTAGTTTGAC 57.454 39.130 0.00 0.00 0.00 3.18
261 262 4.394920 TCAATGAAATCGCCTAGTTTGACC 59.605 41.667 0.00 0.00 0.00 4.02
262 263 2.343101 TGAAATCGCCTAGTTTGACCG 58.657 47.619 0.00 0.00 0.00 4.79
263 264 2.028839 TGAAATCGCCTAGTTTGACCGA 60.029 45.455 0.00 0.00 0.00 4.69
264 265 2.754946 AATCGCCTAGTTTGACCGAA 57.245 45.000 0.00 0.00 0.00 4.30
265 266 2.981859 ATCGCCTAGTTTGACCGAAT 57.018 45.000 0.00 0.00 0.00 3.34
266 267 4.395959 AATCGCCTAGTTTGACCGAATA 57.604 40.909 0.00 0.00 0.00 1.75
267 268 4.602340 ATCGCCTAGTTTGACCGAATAT 57.398 40.909 0.00 0.00 0.00 1.28
268 269 3.713288 TCGCCTAGTTTGACCGAATATG 58.287 45.455 0.00 0.00 0.00 1.78
269 270 3.131577 TCGCCTAGTTTGACCGAATATGT 59.868 43.478 0.00 0.00 0.00 2.29
270 271 3.245284 CGCCTAGTTTGACCGAATATGTG 59.755 47.826 0.00 0.00 0.00 3.21
271 272 4.189231 GCCTAGTTTGACCGAATATGTGT 58.811 43.478 0.00 0.00 0.00 3.72
272 273 4.270325 GCCTAGTTTGACCGAATATGTGTC 59.730 45.833 0.00 0.00 0.00 3.67
273 274 4.503007 CCTAGTTTGACCGAATATGTGTCG 59.497 45.833 0.00 0.00 38.24 4.35
274 275 3.921677 AGTTTGACCGAATATGTGTCGT 58.078 40.909 0.00 0.00 36.77 4.34
275 276 3.678072 AGTTTGACCGAATATGTGTCGTG 59.322 43.478 0.00 0.00 36.77 4.35
276 277 3.306917 TTGACCGAATATGTGTCGTGT 57.693 42.857 0.00 0.00 36.77 4.49
277 278 3.306917 TGACCGAATATGTGTCGTGTT 57.693 42.857 0.00 0.00 36.77 3.32
278 279 3.655486 TGACCGAATATGTGTCGTGTTT 58.345 40.909 0.00 0.00 36.77 2.83
279 280 3.430556 TGACCGAATATGTGTCGTGTTTG 59.569 43.478 0.00 0.00 36.77 2.93
280 281 2.739913 ACCGAATATGTGTCGTGTTTGG 59.260 45.455 4.07 4.07 36.77 3.28
281 282 2.475519 CCGAATATGTGTCGTGTTTGGC 60.476 50.000 0.00 0.00 36.77 4.52
282 283 2.475519 CGAATATGTGTCGTGTTTGGCC 60.476 50.000 0.00 0.00 33.80 5.36
283 284 1.083489 ATATGTGTCGTGTTTGGCCG 58.917 50.000 0.00 0.00 0.00 6.13
284 285 0.033642 TATGTGTCGTGTTTGGCCGA 59.966 50.000 0.00 0.00 0.00 5.54
285 286 0.816018 ATGTGTCGTGTTTGGCCGAA 60.816 50.000 0.00 0.00 34.47 4.30
286 287 0.816018 TGTGTCGTGTTTGGCCGAAT 60.816 50.000 9.15 0.00 34.47 3.34
287 288 0.309612 GTGTCGTGTTTGGCCGAATT 59.690 50.000 9.15 0.00 34.47 2.17
288 289 1.025812 TGTCGTGTTTGGCCGAATTT 58.974 45.000 9.15 0.00 34.47 1.82
289 290 1.405821 TGTCGTGTTTGGCCGAATTTT 59.594 42.857 9.15 0.00 34.47 1.82
290 291 1.784283 GTCGTGTTTGGCCGAATTTTG 59.216 47.619 9.15 0.00 34.47 2.44
291 292 1.676529 TCGTGTTTGGCCGAATTTTGA 59.323 42.857 9.15 2.37 0.00 2.69
292 293 1.784283 CGTGTTTGGCCGAATTTTGAC 59.216 47.619 9.15 0.00 0.00 3.18
293 294 2.131972 GTGTTTGGCCGAATTTTGACC 58.868 47.619 9.15 0.00 0.00 4.02
294 295 1.269309 TGTTTGGCCGAATTTTGACCG 60.269 47.619 9.15 0.00 0.00 4.79
295 296 1.001158 GTTTGGCCGAATTTTGACCGA 60.001 47.619 9.15 0.00 0.00 4.69
296 297 0.878416 TTGGCCGAATTTTGACCGAG 59.122 50.000 0.00 0.00 0.00 4.63
297 298 0.250553 TGGCCGAATTTTGACCGAGT 60.251 50.000 0.00 0.00 0.00 4.18
298 299 0.879090 GGCCGAATTTTGACCGAGTT 59.121 50.000 0.00 0.00 0.00 3.01
299 300 1.268625 GGCCGAATTTTGACCGAGTTT 59.731 47.619 0.00 0.00 0.00 2.66
300 301 2.485038 GGCCGAATTTTGACCGAGTTTA 59.515 45.455 0.00 0.00 0.00 2.01
301 302 3.128068 GGCCGAATTTTGACCGAGTTTAT 59.872 43.478 0.00 0.00 0.00 1.40
302 303 4.380128 GGCCGAATTTTGACCGAGTTTATT 60.380 41.667 0.00 0.00 0.00 1.40
303 304 5.158494 GCCGAATTTTGACCGAGTTTATTT 58.842 37.500 0.00 0.00 0.00 1.40
304 305 5.631929 GCCGAATTTTGACCGAGTTTATTTT 59.368 36.000 0.00 0.00 0.00 1.82
305 306 6.144886 GCCGAATTTTGACCGAGTTTATTTTT 59.855 34.615 0.00 0.00 0.00 1.94
306 307 7.618547 GCCGAATTTTGACCGAGTTTATTTTTC 60.619 37.037 0.00 0.00 0.00 2.29
307 308 7.380065 CCGAATTTTGACCGAGTTTATTTTTCA 59.620 33.333 0.00 0.00 0.00 2.69
308 309 8.747666 CGAATTTTGACCGAGTTTATTTTTCAA 58.252 29.630 0.00 0.00 0.00 2.69
325 326 2.193786 AAAAACGTCGGCTGGGGT 59.806 55.556 0.00 0.00 0.00 4.95
326 327 2.190841 AAAAACGTCGGCTGGGGTG 61.191 57.895 0.00 0.00 0.00 4.61
327 328 2.612095 AAAAACGTCGGCTGGGGTGA 62.612 55.000 0.00 0.00 0.00 4.02
328 329 3.530910 AAACGTCGGCTGGGGTGAG 62.531 63.158 0.00 0.00 0.00 3.51
331 332 4.021925 GTCGGCTGGGGTGAGCTT 62.022 66.667 0.00 0.00 39.11 3.74
332 333 4.020617 TCGGCTGGGGTGAGCTTG 62.021 66.667 0.00 0.00 39.11 4.01
334 335 4.748144 GGCTGGGGTGAGCTTGGG 62.748 72.222 0.00 0.00 39.11 4.12
335 336 4.748144 GCTGGGGTGAGCTTGGGG 62.748 72.222 0.00 0.00 35.95 4.96
336 337 4.748144 CTGGGGTGAGCTTGGGGC 62.748 72.222 0.00 0.00 42.19 5.80
361 362 4.104183 GGGAAACCGATCGCCCCA 62.104 66.667 20.73 0.00 43.64 4.96
362 363 2.192175 GGAAACCGATCGCCCCAT 59.808 61.111 10.32 0.00 0.00 4.00
363 364 2.186826 GGAAACCGATCGCCCCATG 61.187 63.158 10.32 0.00 0.00 3.66
364 365 2.828549 AAACCGATCGCCCCATGC 60.829 61.111 10.32 0.00 0.00 4.06
365 366 4.875713 AACCGATCGCCCCATGCC 62.876 66.667 10.32 0.00 36.24 4.40
368 369 4.687215 CGATCGCCCCATGCCGAT 62.687 66.667 0.26 12.06 36.42 4.18
369 370 2.662596 GATCGCCCCATGCCGATA 59.337 61.111 12.16 0.00 34.75 2.92
370 371 1.003839 GATCGCCCCATGCCGATAA 60.004 57.895 12.16 0.00 34.75 1.75
371 372 0.392998 GATCGCCCCATGCCGATAAT 60.393 55.000 12.16 0.00 34.75 1.28
372 373 0.038166 ATCGCCCCATGCCGATAATT 59.962 50.000 10.96 0.00 36.24 1.40
373 374 0.179004 TCGCCCCATGCCGATAATTT 60.179 50.000 0.00 0.00 36.24 1.82
374 375 0.240945 CGCCCCATGCCGATAATTTC 59.759 55.000 0.00 0.00 36.24 2.17
376 377 0.240945 CCCCATGCCGATAATTTCGC 59.759 55.000 5.00 0.00 46.71 4.70
377 378 0.240945 CCCATGCCGATAATTTCGCC 59.759 55.000 5.00 0.00 46.71 5.54
378 379 0.110238 CCATGCCGATAATTTCGCCG 60.110 55.000 5.00 0.00 46.71 6.46
379 380 0.865111 CATGCCGATAATTTCGCCGA 59.135 50.000 5.00 0.00 46.71 5.54
380 381 0.865769 ATGCCGATAATTTCGCCGAC 59.134 50.000 0.00 0.00 46.71 4.79
381 382 0.460459 TGCCGATAATTTCGCCGACA 60.460 50.000 0.00 0.00 46.71 4.35
382 383 0.232303 GCCGATAATTTCGCCGACAG 59.768 55.000 0.00 0.00 46.71 3.51
383 384 0.859232 CCGATAATTTCGCCGACAGG 59.141 55.000 0.00 0.00 46.71 4.00
384 385 0.859232 CGATAATTTCGCCGACAGGG 59.141 55.000 0.00 0.00 41.69 4.45
385 386 1.537348 CGATAATTTCGCCGACAGGGA 60.537 52.381 0.00 0.00 41.69 4.20
386 387 2.135933 GATAATTTCGCCGACAGGGAG 58.864 52.381 0.00 0.00 38.87 4.30
387 388 0.461339 TAATTTCGCCGACAGGGAGC 60.461 55.000 0.00 0.00 38.87 4.70
406 407 3.171388 CCCCCAGGCGGCTCTATT 61.171 66.667 9.32 0.00 0.00 1.73
407 408 2.757124 CCCCCAGGCGGCTCTATTT 61.757 63.158 9.32 0.00 0.00 1.40
408 409 1.227973 CCCCAGGCGGCTCTATTTC 60.228 63.158 9.32 0.00 0.00 2.17
409 410 1.526887 CCCAGGCGGCTCTATTTCA 59.473 57.895 9.32 0.00 0.00 2.69
410 411 0.107214 CCCAGGCGGCTCTATTTCAA 60.107 55.000 9.32 0.00 0.00 2.69
411 412 1.303309 CCAGGCGGCTCTATTTCAAG 58.697 55.000 9.32 0.00 0.00 3.02
412 413 0.659957 CAGGCGGCTCTATTTCAAGC 59.340 55.000 9.32 0.00 37.80 4.01
419 420 3.133141 GCTCTATTTCAAGCCCTAGGG 57.867 52.381 24.89 24.89 38.57 3.53
420 421 2.706190 GCTCTATTTCAAGCCCTAGGGA 59.294 50.000 33.21 9.86 37.50 4.20
421 422 3.244387 GCTCTATTTCAAGCCCTAGGGAG 60.244 52.174 33.21 19.51 37.50 4.30
422 423 3.318313 TCTATTTCAAGCCCTAGGGAGG 58.682 50.000 33.21 18.83 43.33 4.30
428 429 4.222847 GCCCTAGGGAGGCGAACG 62.223 72.222 33.21 1.27 42.21 3.95
429 430 3.537874 CCCTAGGGAGGCGAACGG 61.538 72.222 24.99 0.00 42.21 4.44
430 431 4.222847 CCTAGGGAGGCGAACGGC 62.223 72.222 12.58 12.58 35.54 5.68
444 445 3.197614 CGGCTGGAGACGCTCTAA 58.802 61.111 6.78 0.00 40.91 2.10
445 446 1.226717 CGGCTGGAGACGCTCTAAC 60.227 63.158 6.78 0.00 40.91 2.34
446 447 1.142097 GGCTGGAGACGCTCTAACC 59.858 63.158 6.78 2.76 0.00 2.85
447 448 1.324005 GGCTGGAGACGCTCTAACCT 61.324 60.000 6.78 0.00 0.00 3.50
448 449 1.390565 GCTGGAGACGCTCTAACCTA 58.609 55.000 6.78 0.00 0.00 3.08
449 450 1.335496 GCTGGAGACGCTCTAACCTAG 59.665 57.143 6.78 0.00 0.00 3.02
450 451 2.645802 CTGGAGACGCTCTAACCTAGT 58.354 52.381 6.78 0.00 0.00 2.57
451 452 2.614983 CTGGAGACGCTCTAACCTAGTC 59.385 54.545 6.78 0.00 0.00 2.59
452 453 1.598601 GGAGACGCTCTAACCTAGTCG 59.401 57.143 6.78 0.00 36.97 4.18
453 454 1.003652 GAGACGCTCTAACCTAGTCGC 60.004 57.143 0.37 0.00 36.97 5.19
454 455 0.029167 GACGCTCTAACCTAGTCGCC 59.971 60.000 0.00 0.00 0.00 5.54
455 456 0.394080 ACGCTCTAACCTAGTCGCCT 60.394 55.000 0.00 0.00 0.00 5.52
456 457 0.739561 CGCTCTAACCTAGTCGCCTT 59.260 55.000 0.00 0.00 0.00 4.35
457 458 1.534175 CGCTCTAACCTAGTCGCCTTG 60.534 57.143 0.00 0.00 0.00 3.61
458 459 1.202428 GCTCTAACCTAGTCGCCTTGG 60.202 57.143 0.00 0.00 39.25 3.61
459 460 1.409427 CTCTAACCTAGTCGCCTTGGG 59.591 57.143 0.00 0.00 37.84 4.12
460 461 1.006281 TCTAACCTAGTCGCCTTGGGA 59.994 52.381 0.00 0.00 37.84 4.37
461 462 1.409427 CTAACCTAGTCGCCTTGGGAG 59.591 57.143 0.00 0.00 37.84 4.30
462 463 0.544595 AACCTAGTCGCCTTGGGAGT 60.545 55.000 0.00 0.00 37.84 3.85
463 464 0.971447 ACCTAGTCGCCTTGGGAGTC 60.971 60.000 0.00 0.00 37.84 3.36
464 465 1.433879 CTAGTCGCCTTGGGAGTCG 59.566 63.158 0.00 0.00 30.87 4.18
465 466 1.303888 TAGTCGCCTTGGGAGTCGT 60.304 57.895 0.00 0.00 30.87 4.34
466 467 1.310933 TAGTCGCCTTGGGAGTCGTC 61.311 60.000 0.00 0.00 30.87 4.20
467 468 2.282958 TCGCCTTGGGAGTCGTCT 60.283 61.111 0.00 0.00 0.00 4.18
468 469 2.125912 CGCCTTGGGAGTCGTCTG 60.126 66.667 0.00 0.00 0.00 3.51
469 470 2.932234 CGCCTTGGGAGTCGTCTGT 61.932 63.158 0.00 0.00 0.00 3.41
470 471 1.374758 GCCTTGGGAGTCGTCTGTG 60.375 63.158 0.00 0.00 0.00 3.66
471 472 1.374758 CCTTGGGAGTCGTCTGTGC 60.375 63.158 0.00 0.00 0.00 4.57
472 473 1.367471 CTTGGGAGTCGTCTGTGCA 59.633 57.895 0.00 0.00 0.00 4.57
473 474 0.036952 CTTGGGAGTCGTCTGTGCAT 60.037 55.000 0.00 0.00 0.00 3.96
474 475 0.320683 TTGGGAGTCGTCTGTGCATG 60.321 55.000 0.00 0.00 0.00 4.06
475 476 1.184970 TGGGAGTCGTCTGTGCATGA 61.185 55.000 0.00 0.00 0.00 3.07
476 477 0.037326 GGGAGTCGTCTGTGCATGAA 60.037 55.000 0.00 0.00 0.00 2.57
477 478 1.608025 GGGAGTCGTCTGTGCATGAAA 60.608 52.381 0.00 0.00 0.00 2.69
478 479 2.143122 GGAGTCGTCTGTGCATGAAAA 58.857 47.619 0.00 0.00 0.00 2.29
479 480 2.548057 GGAGTCGTCTGTGCATGAAAAA 59.452 45.455 0.00 0.00 0.00 1.94
504 505 2.787249 CGAGGGCGTGCTCAATTG 59.213 61.111 0.00 0.00 0.00 2.32
505 506 2.753966 CGAGGGCGTGCTCAATTGG 61.754 63.158 5.42 0.00 0.00 3.16
506 507 1.675641 GAGGGCGTGCTCAATTGGT 60.676 57.895 5.42 0.00 0.00 3.67
507 508 1.926511 GAGGGCGTGCTCAATTGGTG 61.927 60.000 5.42 0.31 0.00 4.17
508 509 2.568090 GGCGTGCTCAATTGGTGG 59.432 61.111 5.42 0.00 0.00 4.61
509 510 2.126346 GCGTGCTCAATTGGTGGC 60.126 61.111 5.42 8.57 0.00 5.01
510 511 2.568090 CGTGCTCAATTGGTGGCC 59.432 61.111 5.42 0.00 0.00 5.36
511 512 2.973082 GTGCTCAATTGGTGGCCC 59.027 61.111 5.42 0.00 0.00 5.80
512 513 1.907807 GTGCTCAATTGGTGGCCCA 60.908 57.895 5.42 0.00 39.65 5.36
519 520 3.225235 TTGGTGGCCCAACAAAGC 58.775 55.556 12.88 0.00 45.93 3.51
520 521 2.439104 TTGGTGGCCCAACAAAGCC 61.439 57.895 12.88 0.00 45.93 4.35
524 525 3.869481 GGCCCAACAAAGCCTTGA 58.131 55.556 1.09 0.00 46.14 3.02
525 526 2.365410 GGCCCAACAAAGCCTTGAT 58.635 52.632 1.09 0.00 46.14 2.57
526 527 0.037046 GGCCCAACAAAGCCTTGATG 60.037 55.000 1.09 0.00 46.14 3.07
530 531 2.336554 CAACAAAGCCTTGATGGACG 57.663 50.000 1.09 0.00 38.35 4.79
531 532 1.879380 CAACAAAGCCTTGATGGACGA 59.121 47.619 1.09 0.00 38.35 4.20
532 533 1.813513 ACAAAGCCTTGATGGACGAG 58.186 50.000 1.09 0.00 38.35 4.18
533 534 1.347707 ACAAAGCCTTGATGGACGAGA 59.652 47.619 1.09 0.00 38.35 4.04
534 535 1.734465 CAAAGCCTTGATGGACGAGAC 59.266 52.381 0.00 0.00 38.35 3.36
535 536 1.270907 AAGCCTTGATGGACGAGACT 58.729 50.000 0.00 0.00 38.35 3.24
536 537 1.270907 AGCCTTGATGGACGAGACTT 58.729 50.000 0.00 0.00 38.35 3.01
537 538 1.066573 AGCCTTGATGGACGAGACTTG 60.067 52.381 0.00 0.00 38.35 3.16
538 539 1.363744 CCTTGATGGACGAGACTTGC 58.636 55.000 0.00 0.00 38.35 4.01
539 540 1.363744 CTTGATGGACGAGACTTGCC 58.636 55.000 0.00 0.00 31.94 4.52
540 541 0.976641 TTGATGGACGAGACTTGCCT 59.023 50.000 0.00 0.00 0.00 4.75
541 542 0.247460 TGATGGACGAGACTTGCCTG 59.753 55.000 0.00 0.00 0.00 4.85
542 543 1.078848 ATGGACGAGACTTGCCTGC 60.079 57.895 0.00 0.00 0.00 4.85
543 544 1.548357 ATGGACGAGACTTGCCTGCT 61.548 55.000 0.00 0.00 0.00 4.24
544 545 1.446966 GGACGAGACTTGCCTGCTC 60.447 63.158 0.00 0.00 0.00 4.26
545 546 1.446966 GACGAGACTTGCCTGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
546 547 1.882989 GACGAGACTTGCCTGCTCCT 61.883 60.000 0.00 0.00 0.00 3.69
547 548 1.153667 CGAGACTTGCCTGCTCCTC 60.154 63.158 0.00 0.00 0.00 3.71
548 549 1.220477 GAGACTTGCCTGCTCCTCC 59.780 63.158 0.00 0.00 0.00 4.30
549 550 2.250741 GAGACTTGCCTGCTCCTCCC 62.251 65.000 0.00 0.00 0.00 4.30
550 551 3.672295 GACTTGCCTGCTCCTCCCG 62.672 68.421 0.00 0.00 0.00 5.14
559 560 4.436998 CTCCTCCCGCGTGTGTCC 62.437 72.222 4.92 0.00 0.00 4.02
561 562 4.082523 CCTCCCGCGTGTGTCCAT 62.083 66.667 4.92 0.00 0.00 3.41
562 563 2.509336 CTCCCGCGTGTGTCCATC 60.509 66.667 4.92 0.00 0.00 3.51
563 564 4.077184 TCCCGCGTGTGTCCATCC 62.077 66.667 4.92 0.00 0.00 3.51
565 566 4.735132 CCGCGTGTGTCCATCCGT 62.735 66.667 4.92 0.00 0.00 4.69
566 567 3.478394 CGCGTGTGTCCATCCGTG 61.478 66.667 0.00 0.00 0.00 4.94
567 568 3.788766 GCGTGTGTCCATCCGTGC 61.789 66.667 0.00 0.00 0.00 5.34
568 569 2.048222 CGTGTGTCCATCCGTGCT 60.048 61.111 0.00 0.00 0.00 4.40
569 570 2.094659 CGTGTGTCCATCCGTGCTC 61.095 63.158 0.00 0.00 0.00 4.26
570 571 1.741770 GTGTGTCCATCCGTGCTCC 60.742 63.158 0.00 0.00 0.00 4.70
571 572 2.125106 GTGTCCATCCGTGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
572 573 3.770040 TGTCCATCCGTGCTCCCG 61.770 66.667 0.00 0.00 0.00 5.14
576 577 4.201679 CATCCGTGCTCCCGCGTA 62.202 66.667 4.92 0.00 43.11 4.42
577 578 4.203076 ATCCGTGCTCCCGCGTAC 62.203 66.667 4.92 0.00 43.11 3.67
584 585 4.430765 CTCCCGCGTACGTGGCTT 62.431 66.667 36.56 0.00 43.94 4.35
585 586 4.728102 TCCCGCGTACGTGGCTTG 62.728 66.667 36.56 25.05 43.94 4.01
586 587 4.728102 CCCGCGTACGTGGCTTGA 62.728 66.667 36.56 0.00 43.94 3.02
587 588 2.508439 CCGCGTACGTGGCTTGAT 60.508 61.111 32.68 0.00 39.06 2.57
588 589 2.098233 CCGCGTACGTGGCTTGATT 61.098 57.895 32.68 0.00 39.06 2.57
589 590 1.632046 CCGCGTACGTGGCTTGATTT 61.632 55.000 32.68 0.00 39.06 2.17
590 591 0.518355 CGCGTACGTGGCTTGATTTG 60.518 55.000 20.84 0.00 33.53 2.32
591 592 0.793861 GCGTACGTGGCTTGATTTGA 59.206 50.000 17.90 0.00 0.00 2.69
592 593 1.396996 GCGTACGTGGCTTGATTTGAT 59.603 47.619 17.90 0.00 0.00 2.57
593 594 2.159572 GCGTACGTGGCTTGATTTGATT 60.160 45.455 17.90 0.00 0.00 2.57
594 595 3.416277 CGTACGTGGCTTGATTTGATTG 58.584 45.455 7.22 0.00 0.00 2.67
595 596 3.727673 CGTACGTGGCTTGATTTGATTGG 60.728 47.826 7.22 0.00 0.00 3.16
596 597 2.513753 ACGTGGCTTGATTTGATTGGA 58.486 42.857 0.00 0.00 0.00 3.53
597 598 2.890311 ACGTGGCTTGATTTGATTGGAA 59.110 40.909 0.00 0.00 0.00 3.53
598 599 3.244976 CGTGGCTTGATTTGATTGGAAC 58.755 45.455 0.00 0.00 0.00 3.62
599 600 3.305267 CGTGGCTTGATTTGATTGGAACA 60.305 43.478 0.00 0.00 0.00 3.18
615 616 5.934935 TGGAACAAAATAAGAACCGTCTC 57.065 39.130 0.00 0.00 31.92 3.36
616 617 5.369833 TGGAACAAAATAAGAACCGTCTCA 58.630 37.500 0.00 0.00 31.92 3.27
617 618 5.237779 TGGAACAAAATAAGAACCGTCTCAC 59.762 40.000 0.00 0.00 31.92 3.51
618 619 5.334646 GGAACAAAATAAGAACCGTCTCACC 60.335 44.000 0.00 0.00 30.70 4.02
619 620 4.070009 ACAAAATAAGAACCGTCTCACCC 58.930 43.478 0.00 0.00 30.70 4.61
620 621 4.202430 ACAAAATAAGAACCGTCTCACCCT 60.202 41.667 0.00 0.00 30.70 4.34
621 622 3.889520 AATAAGAACCGTCTCACCCTC 57.110 47.619 0.00 0.00 30.70 4.30
622 623 2.599408 TAAGAACCGTCTCACCCTCT 57.401 50.000 0.00 0.00 30.70 3.69
623 624 1.718280 AAGAACCGTCTCACCCTCTT 58.282 50.000 0.00 0.00 30.70 2.85
624 625 2.599408 AGAACCGTCTCACCCTCTTA 57.401 50.000 0.00 0.00 0.00 2.10
625 626 2.885616 AGAACCGTCTCACCCTCTTAA 58.114 47.619 0.00 0.00 0.00 1.85
626 627 3.236896 AGAACCGTCTCACCCTCTTAAA 58.763 45.455 0.00 0.00 0.00 1.52
627 628 3.644738 AGAACCGTCTCACCCTCTTAAAA 59.355 43.478 0.00 0.00 0.00 1.52
628 629 4.286291 AGAACCGTCTCACCCTCTTAAAAT 59.714 41.667 0.00 0.00 0.00 1.82
629 630 4.203654 ACCGTCTCACCCTCTTAAAATC 57.796 45.455 0.00 0.00 0.00 2.17
630 631 3.581332 ACCGTCTCACCCTCTTAAAATCA 59.419 43.478 0.00 0.00 0.00 2.57
631 632 4.225267 ACCGTCTCACCCTCTTAAAATCAT 59.775 41.667 0.00 0.00 0.00 2.45
632 633 4.572389 CCGTCTCACCCTCTTAAAATCATG 59.428 45.833 0.00 0.00 0.00 3.07
633 634 4.572389 CGTCTCACCCTCTTAAAATCATGG 59.428 45.833 0.00 0.00 0.00 3.66
634 635 4.884164 GTCTCACCCTCTTAAAATCATGGG 59.116 45.833 0.00 0.00 40.37 4.00
635 636 4.079787 TCTCACCCTCTTAAAATCATGGGG 60.080 45.833 0.00 0.00 38.94 4.96
636 637 3.052944 TCACCCTCTTAAAATCATGGGGG 60.053 47.826 0.00 0.00 39.38 5.40
678 679 5.613358 AAAAAGACAGCCGTAGAATGAAG 57.387 39.130 0.00 0.00 0.00 3.02
679 680 3.963428 AAGACAGCCGTAGAATGAAGT 57.037 42.857 0.00 0.00 0.00 3.01
680 681 3.238108 AGACAGCCGTAGAATGAAGTG 57.762 47.619 0.00 0.00 0.00 3.16
681 682 2.093973 AGACAGCCGTAGAATGAAGTGG 60.094 50.000 0.00 0.00 0.00 4.00
682 683 1.066143 ACAGCCGTAGAATGAAGTGGG 60.066 52.381 0.00 0.00 0.00 4.61
683 684 1.207089 CAGCCGTAGAATGAAGTGGGA 59.793 52.381 0.00 0.00 0.00 4.37
684 685 1.906574 AGCCGTAGAATGAAGTGGGAA 59.093 47.619 0.00 0.00 0.00 3.97
685 686 2.007608 GCCGTAGAATGAAGTGGGAAC 58.992 52.381 0.00 0.00 0.00 3.62
686 687 2.614481 GCCGTAGAATGAAGTGGGAACA 60.614 50.000 0.00 0.00 38.70 3.18
698 699 1.974265 TGGGAACACGAATGAAAGCA 58.026 45.000 0.00 0.00 33.40 3.91
699 700 2.513753 TGGGAACACGAATGAAAGCAT 58.486 42.857 0.00 0.00 32.77 3.79
700 701 2.228582 TGGGAACACGAATGAAAGCATG 59.771 45.455 0.00 0.00 32.00 4.06
701 702 2.487762 GGGAACACGAATGAAAGCATGA 59.512 45.455 0.00 0.00 34.26 3.07
702 703 3.426695 GGGAACACGAATGAAAGCATGAG 60.427 47.826 0.00 0.00 34.26 2.90
703 704 3.426695 GGAACACGAATGAAAGCATGAGG 60.427 47.826 0.00 0.00 34.26 3.86
704 705 3.057969 ACACGAATGAAAGCATGAGGA 57.942 42.857 0.00 0.00 34.26 3.71
705 706 3.005554 ACACGAATGAAAGCATGAGGAG 58.994 45.455 0.00 0.00 34.26 3.69
706 707 2.353889 CACGAATGAAAGCATGAGGAGG 59.646 50.000 0.00 0.00 34.26 4.30
707 708 1.945394 CGAATGAAAGCATGAGGAGGG 59.055 52.381 0.00 0.00 34.26 4.30
708 709 2.420547 CGAATGAAAGCATGAGGAGGGA 60.421 50.000 0.00 0.00 34.26 4.20
709 710 3.212685 GAATGAAAGCATGAGGAGGGAG 58.787 50.000 0.00 0.00 34.26 4.30
710 711 0.254178 TGAAAGCATGAGGAGGGAGC 59.746 55.000 0.00 0.00 0.00 4.70
711 712 0.254178 GAAAGCATGAGGAGGGAGCA 59.746 55.000 0.00 0.00 0.00 4.26
712 713 0.255318 AAAGCATGAGGAGGGAGCAG 59.745 55.000 0.00 0.00 0.00 4.24
713 714 1.633915 AAGCATGAGGAGGGAGCAGG 61.634 60.000 0.00 0.00 0.00 4.85
714 715 2.509916 CATGAGGAGGGAGCAGGC 59.490 66.667 0.00 0.00 0.00 4.85
715 716 2.041762 ATGAGGAGGGAGCAGGCA 59.958 61.111 0.00 0.00 0.00 4.75
716 717 1.617536 ATGAGGAGGGAGCAGGCAA 60.618 57.895 0.00 0.00 0.00 4.52
717 718 1.633915 ATGAGGAGGGAGCAGGCAAG 61.634 60.000 0.00 0.00 0.00 4.01
718 719 3.695747 GAGGAGGGAGCAGGCAAGC 62.696 68.421 0.00 0.00 0.00 4.01
719 720 4.811364 GGAGGGAGCAGGCAAGCC 62.811 72.222 2.02 2.02 34.23 4.35
723 724 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
724 725 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
725 726 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
739 740 1.644786 GGATCCCACTTTTGACGCCG 61.645 60.000 0.00 0.00 0.00 6.46
782 784 3.203716 AGTTTCGAAGAAACCAGTCACC 58.796 45.455 18.51 0.00 45.90 4.02
783 785 3.118371 AGTTTCGAAGAAACCAGTCACCT 60.118 43.478 18.51 0.00 45.90 4.00
886 892 4.217510 TGGTCAATCATCAATCCCCATTC 58.782 43.478 0.00 0.00 0.00 2.67
900 906 1.501741 CATTCCAACCGACCTTGCG 59.498 57.895 0.00 0.00 0.00 4.85
906 912 1.472990 CAACCGACCTTGCGTTTTTC 58.527 50.000 0.00 0.00 0.00 2.29
907 913 1.096416 AACCGACCTTGCGTTTTTCA 58.904 45.000 0.00 0.00 0.00 2.69
908 914 0.379316 ACCGACCTTGCGTTTTTCAC 59.621 50.000 0.00 0.00 0.00 3.18
985 1016 2.125512 CCCCACTGCTACAGCGTC 60.126 66.667 0.00 0.00 45.83 5.19
997 1028 3.303135 AGCGTCAGTTGGAGCCGA 61.303 61.111 0.00 0.00 0.00 5.54
1029 1060 2.293318 ATCCCCGAACAGCAGAGCA 61.293 57.895 0.00 0.00 0.00 4.26
1215 1246 2.428622 GGCACCCTGTACAACCGT 59.571 61.111 0.00 0.00 0.00 4.83
1226 1257 2.168936 TGTACAACCGTGTCTTCTTGGT 59.831 45.455 0.00 0.00 39.30 3.67
1470 1501 2.433318 AAGCTCAGCTTCGACGCC 60.433 61.111 5.91 0.00 46.77 5.68
1812 1843 2.858344 CCTCCATTTCGACGTGTATGAC 59.142 50.000 0.00 0.00 0.00 3.06
1825 1856 2.816360 TATGACCTCGACGTCGGCG 61.816 63.158 35.05 26.38 44.93 6.46
1912 1943 1.446099 GAAGATGTCGACTGCGCCA 60.446 57.895 17.92 0.00 37.46 5.69
2104 3241 5.703978 TTTTCTTGAATCGATTCTTGCCA 57.296 34.783 32.08 14.68 37.67 4.92
2106 3243 3.942829 TCTTGAATCGATTCTTGCCAGT 58.057 40.909 32.08 0.00 37.67 4.00
2108 3245 5.111989 TCTTGAATCGATTCTTGCCAGTAG 58.888 41.667 32.08 17.85 37.67 2.57
2109 3246 4.471904 TGAATCGATTCTTGCCAGTAGT 57.528 40.909 32.08 0.00 37.67 2.73
2112 3249 5.127194 TGAATCGATTCTTGCCAGTAGTAGT 59.873 40.000 32.08 0.00 37.67 2.73
2114 3251 5.496133 TCGATTCTTGCCAGTAGTAGTAC 57.504 43.478 0.00 0.00 0.00 2.73
2115 3252 5.191426 TCGATTCTTGCCAGTAGTAGTACT 58.809 41.667 8.14 8.14 40.38 2.73
2162 3628 3.963129 TCAAACAAAACTCTGGGTGACT 58.037 40.909 0.00 0.00 0.00 3.41
2251 4414 2.826128 TCACTGATCTGGGTCACTGTAC 59.174 50.000 1.40 0.00 0.00 2.90
2256 4419 1.079819 CTGGGTCACTGTACAGGCG 60.080 63.158 26.12 16.65 0.00 5.52
2356 4519 6.463049 CCAAATCGATTGTCACCTACTCCTAT 60.463 42.308 12.25 0.00 37.32 2.57
2357 4520 6.732896 AATCGATTGTCACCTACTCCTATT 57.267 37.500 10.50 0.00 0.00 1.73
2473 4636 2.516227 TCTTCACCACCAACCACAAA 57.484 45.000 0.00 0.00 0.00 2.83
2595 4758 2.819595 CGGCATCCAAGACCACCG 60.820 66.667 0.00 0.00 0.00 4.94
2620 4783 3.905678 CCGGAGATCGAGGCGCTT 61.906 66.667 7.64 0.00 42.43 4.68
3057 5221 4.024387 GCGACCATTAATTTGAGCGGAATA 60.024 41.667 0.00 0.00 0.00 1.75
3088 5253 5.181622 AGTTTATTAAAATGTTCACGGCCGA 59.818 36.000 35.90 9.64 0.00 5.54
3101 5266 1.745864 GGCCGACTCAGTCTCTCGA 60.746 63.158 2.61 0.00 0.00 4.04
3114 5279 2.034053 GTCTCTCGAAGGTGCTCATAGG 59.966 54.545 0.00 0.00 0.00 2.57
3115 5280 2.028130 CTCTCGAAGGTGCTCATAGGT 58.972 52.381 0.00 0.00 0.00 3.08
3116 5281 1.751351 TCTCGAAGGTGCTCATAGGTG 59.249 52.381 0.00 0.00 0.00 4.00
3117 5282 1.478510 CTCGAAGGTGCTCATAGGTGT 59.521 52.381 0.00 0.00 0.00 4.16
3118 5283 2.688446 CTCGAAGGTGCTCATAGGTGTA 59.312 50.000 0.00 0.00 0.00 2.90
3119 5284 2.688446 TCGAAGGTGCTCATAGGTGTAG 59.312 50.000 0.00 0.00 0.00 2.74
3120 5285 2.223829 CGAAGGTGCTCATAGGTGTAGG 60.224 54.545 0.00 0.00 0.00 3.18
3121 5286 1.123928 AGGTGCTCATAGGTGTAGGC 58.876 55.000 0.00 0.00 0.00 3.93
3122 5287 1.123928 GGTGCTCATAGGTGTAGGCT 58.876 55.000 0.00 0.00 0.00 4.58
3123 5288 1.202580 GGTGCTCATAGGTGTAGGCTG 60.203 57.143 0.00 0.00 0.00 4.85
3124 5289 1.482593 GTGCTCATAGGTGTAGGCTGT 59.517 52.381 0.00 0.00 0.00 4.40
3125 5290 2.693591 GTGCTCATAGGTGTAGGCTGTA 59.306 50.000 0.00 0.00 0.00 2.74
3126 5291 2.693591 TGCTCATAGGTGTAGGCTGTAC 59.306 50.000 0.00 0.00 0.00 2.90
3132 5297 1.601419 GGTGTAGGCTGTACGCAGGA 61.601 60.000 0.00 0.00 42.78 3.86
3167 5339 2.685106 TTGGCCATTGGGTTTCACTA 57.315 45.000 6.09 0.00 36.17 2.74
3179 5353 7.696992 TTGGGTTTCACTATTTATGAGAACC 57.303 36.000 0.00 0.00 38.30 3.62
3350 5525 4.877823 GTGACATTGAGATGCCTGTATCAA 59.122 41.667 0.00 0.00 36.72 2.57
3355 5530 8.701908 ACATTGAGATGCCTGTATCAAATATT 57.298 30.769 0.00 0.00 36.72 1.28
3546 5780 7.597288 ATCTAGTTACCATAATTTTTGGGCC 57.403 36.000 10.17 0.00 38.64 5.80
3551 5785 2.027285 ACCATAATTTTTGGGCCACAGC 60.027 45.455 5.23 0.00 38.64 4.40
3562 5796 1.271163 GGGCCACAGCTGTAGTTGTTA 60.271 52.381 21.20 0.00 37.38 2.41
3743 5993 4.570772 CGGAATGGACTAATCGACATTTGT 59.429 41.667 0.00 0.00 34.01 2.83
3883 6142 1.067821 GCAAATTCCGTTGGGTTCACA 59.932 47.619 0.00 0.00 33.83 3.58
3884 6143 2.738135 CAAATTCCGTTGGGTTCACAC 58.262 47.619 0.00 0.00 33.83 3.82
3885 6144 2.358322 AATTCCGTTGGGTTCACACT 57.642 45.000 0.00 0.00 33.83 3.55
3886 6145 2.358322 ATTCCGTTGGGTTCACACTT 57.642 45.000 0.00 0.00 33.83 3.16
3887 6146 3.495434 ATTCCGTTGGGTTCACACTTA 57.505 42.857 0.00 0.00 33.83 2.24
3888 6147 3.495434 TTCCGTTGGGTTCACACTTAT 57.505 42.857 0.00 0.00 33.83 1.73
3889 6148 4.620589 TTCCGTTGGGTTCACACTTATA 57.379 40.909 0.00 0.00 33.83 0.98
3890 6149 4.196626 TCCGTTGGGTTCACACTTATAG 57.803 45.455 0.00 0.00 33.83 1.31
3891 6150 3.055675 TCCGTTGGGTTCACACTTATAGG 60.056 47.826 0.00 0.00 33.83 2.57
3892 6151 3.055675 CCGTTGGGTTCACACTTATAGGA 60.056 47.826 0.00 0.00 0.00 2.94
3893 6152 4.383770 CCGTTGGGTTCACACTTATAGGAT 60.384 45.833 0.00 0.00 0.00 3.24
3894 6153 4.570772 CGTTGGGTTCACACTTATAGGATG 59.429 45.833 0.00 0.00 0.00 3.51
3895 6154 4.771114 TGGGTTCACACTTATAGGATGG 57.229 45.455 0.00 0.00 0.00 3.51
3896 6155 3.118038 TGGGTTCACACTTATAGGATGGC 60.118 47.826 0.00 0.00 0.00 4.40
3897 6156 3.136626 GGGTTCACACTTATAGGATGGCT 59.863 47.826 0.00 0.00 0.00 4.75
3898 6157 4.381411 GGTTCACACTTATAGGATGGCTC 58.619 47.826 0.00 0.00 0.00 4.70
3899 6158 4.101741 GGTTCACACTTATAGGATGGCTCT 59.898 45.833 0.00 0.00 0.00 4.09
3900 6159 4.944619 TCACACTTATAGGATGGCTCTG 57.055 45.455 0.00 0.00 0.00 3.35
3901 6160 3.070159 TCACACTTATAGGATGGCTCTGC 59.930 47.826 0.00 0.00 0.00 4.26
3912 6171 3.730761 GCTCTGCCGCTGGTTGTG 61.731 66.667 0.00 0.00 0.00 3.33
3913 6172 3.730761 CTCTGCCGCTGGTTGTGC 61.731 66.667 0.00 0.00 0.00 4.57
3920 6179 3.725819 GCTGGTTGTGCGTGTGTA 58.274 55.556 0.00 0.00 0.00 2.90
3921 6180 1.278637 GCTGGTTGTGCGTGTGTAC 59.721 57.895 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.644992 GAGTTTGGTTGGCGGCAG 59.355 61.111 12.87 0.00 0.00 4.85
3 4 3.283684 CGAGTTTGGTTGGCGGCA 61.284 61.111 7.97 7.97 0.00 5.69
4 5 3.249973 GACGAGTTTGGTTGGCGGC 62.250 63.158 0.00 0.00 0.00 6.53
5 6 2.613506 GGACGAGTTTGGTTGGCGG 61.614 63.158 0.00 0.00 0.00 6.13
8 9 2.613506 GGCGGACGAGTTTGGTTGG 61.614 63.158 0.00 0.00 0.00 3.77
9 10 1.440938 TTGGCGGACGAGTTTGGTTG 61.441 55.000 0.00 0.00 0.00 3.77
10 11 1.153127 TTGGCGGACGAGTTTGGTT 60.153 52.632 0.00 0.00 0.00 3.67
11 12 1.597027 CTTGGCGGACGAGTTTGGT 60.597 57.895 0.00 0.00 0.00 3.67
12 13 2.325082 CCTTGGCGGACGAGTTTGG 61.325 63.158 0.00 0.00 33.16 3.28
13 14 2.966309 GCCTTGGCGGACGAGTTTG 61.966 63.158 0.00 0.00 33.16 2.93
14 15 2.668550 GCCTTGGCGGACGAGTTT 60.669 61.111 0.00 0.00 33.16 2.66
33 34 2.933287 TACACACCTGCCCTGGGG 60.933 66.667 16.03 4.75 36.37 4.96
34 35 2.671070 CTACACACCTGCCCTGGG 59.329 66.667 8.86 8.86 0.00 4.45
35 36 2.045926 GCTACACACCTGCCCTGG 60.046 66.667 0.00 0.00 0.00 4.45
36 37 0.957395 CTTGCTACACACCTGCCCTG 60.957 60.000 0.00 0.00 0.00 4.45
37 38 1.376466 CTTGCTACACACCTGCCCT 59.624 57.895 0.00 0.00 0.00 5.19
38 39 1.675641 CCTTGCTACACACCTGCCC 60.676 63.158 0.00 0.00 0.00 5.36
39 40 0.955919 GTCCTTGCTACACACCTGCC 60.956 60.000 0.00 0.00 0.00 4.85
40 41 1.291877 CGTCCTTGCTACACACCTGC 61.292 60.000 0.00 0.00 0.00 4.85
41 42 0.670546 CCGTCCTTGCTACACACCTG 60.671 60.000 0.00 0.00 0.00 4.00
42 43 1.671742 CCGTCCTTGCTACACACCT 59.328 57.895 0.00 0.00 0.00 4.00
43 44 2.033194 GCCGTCCTTGCTACACACC 61.033 63.158 0.00 0.00 0.00 4.16
44 45 2.380410 CGCCGTCCTTGCTACACAC 61.380 63.158 0.00 0.00 0.00 3.82
45 46 2.048597 CGCCGTCCTTGCTACACA 60.049 61.111 0.00 0.00 0.00 3.72
46 47 2.092882 GTCGCCGTCCTTGCTACAC 61.093 63.158 0.00 0.00 0.00 2.90
47 48 2.260434 GTCGCCGTCCTTGCTACA 59.740 61.111 0.00 0.00 0.00 2.74
48 49 2.879462 CGTCGCCGTCCTTGCTAC 60.879 66.667 0.00 0.00 0.00 3.58
49 50 4.124351 CCGTCGCCGTCCTTGCTA 62.124 66.667 0.00 0.00 0.00 3.49
59 60 2.807631 TACTTCTTCACGCCGTCGCC 62.808 60.000 0.00 0.00 39.84 5.54
60 61 1.403972 CTACTTCTTCACGCCGTCGC 61.404 60.000 0.00 0.00 39.84 5.19
61 62 0.797249 CCTACTTCTTCACGCCGTCG 60.797 60.000 0.00 0.00 42.43 5.12
62 63 0.524862 TCCTACTTCTTCACGCCGTC 59.475 55.000 0.00 0.00 0.00 4.79
63 64 0.526662 CTCCTACTTCTTCACGCCGT 59.473 55.000 0.00 0.00 0.00 5.68
64 65 0.179134 CCTCCTACTTCTTCACGCCG 60.179 60.000 0.00 0.00 0.00 6.46
65 66 1.135053 GTCCTCCTACTTCTTCACGCC 60.135 57.143 0.00 0.00 0.00 5.68
66 67 1.467713 CGTCCTCCTACTTCTTCACGC 60.468 57.143 0.00 0.00 0.00 5.34
67 68 2.082231 TCGTCCTCCTACTTCTTCACG 58.918 52.381 0.00 0.00 0.00 4.35
68 69 2.159544 CGTCGTCCTCCTACTTCTTCAC 60.160 54.545 0.00 0.00 0.00 3.18
69 70 2.082231 CGTCGTCCTCCTACTTCTTCA 58.918 52.381 0.00 0.00 0.00 3.02
70 71 1.401199 CCGTCGTCCTCCTACTTCTTC 59.599 57.143 0.00 0.00 0.00 2.87
71 72 1.461559 CCGTCGTCCTCCTACTTCTT 58.538 55.000 0.00 0.00 0.00 2.52
72 73 1.031029 GCCGTCGTCCTCCTACTTCT 61.031 60.000 0.00 0.00 0.00 2.85
73 74 1.432657 GCCGTCGTCCTCCTACTTC 59.567 63.158 0.00 0.00 0.00 3.01
74 75 2.404995 CGCCGTCGTCCTCCTACTT 61.405 63.158 0.00 0.00 0.00 2.24
75 76 2.823147 CGCCGTCGTCCTCCTACT 60.823 66.667 0.00 0.00 0.00 2.57
76 77 3.885521 CCGCCGTCGTCCTCCTAC 61.886 72.222 0.00 0.00 0.00 3.18
92 93 3.479269 CTTCTTCACGCCGTCGCC 61.479 66.667 0.00 0.00 39.84 5.54
93 94 3.479269 CCTTCTTCACGCCGTCGC 61.479 66.667 0.00 0.00 39.84 5.19
94 95 1.801913 CTCCTTCTTCACGCCGTCG 60.802 63.158 0.00 0.00 42.43 5.12
95 96 1.446272 CCTCCTTCTTCACGCCGTC 60.446 63.158 0.00 0.00 0.00 4.79
96 97 1.878656 CTCCTCCTTCTTCACGCCGT 61.879 60.000 0.00 0.00 0.00 5.68
97 98 1.153745 CTCCTCCTTCTTCACGCCG 60.154 63.158 0.00 0.00 0.00 6.46
98 99 1.219393 CCTCCTCCTTCTTCACGCC 59.781 63.158 0.00 0.00 0.00 5.68
99 100 0.108567 GTCCTCCTCCTTCTTCACGC 60.109 60.000 0.00 0.00 0.00 5.34
100 101 0.171455 CGTCCTCCTCCTTCTTCACG 59.829 60.000 0.00 0.00 0.00 4.35
101 102 1.202817 GTCGTCCTCCTCCTTCTTCAC 59.797 57.143 0.00 0.00 0.00 3.18
102 103 1.546961 GTCGTCCTCCTCCTTCTTCA 58.453 55.000 0.00 0.00 0.00 3.02
103 104 0.452585 CGTCGTCCTCCTCCTTCTTC 59.547 60.000 0.00 0.00 0.00 2.87
104 105 0.966370 CCGTCGTCCTCCTCCTTCTT 60.966 60.000 0.00 0.00 0.00 2.52
105 106 1.378778 CCGTCGTCCTCCTCCTTCT 60.379 63.158 0.00 0.00 0.00 2.85
106 107 3.066233 GCCGTCGTCCTCCTCCTTC 62.066 68.421 0.00 0.00 0.00 3.46
107 108 3.069318 GCCGTCGTCCTCCTCCTT 61.069 66.667 0.00 0.00 0.00 3.36
108 109 4.361971 TGCCGTCGTCCTCCTCCT 62.362 66.667 0.00 0.00 0.00 3.69
109 110 3.827898 CTGCCGTCGTCCTCCTCC 61.828 72.222 0.00 0.00 0.00 4.30
110 111 4.500116 GCTGCCGTCGTCCTCCTC 62.500 72.222 0.00 0.00 0.00 3.71
116 117 3.764049 GTTGTCGCTGCCGTCGTC 61.764 66.667 0.00 0.00 35.54 4.20
117 118 4.578898 TGTTGTCGCTGCCGTCGT 62.579 61.111 0.00 0.00 35.54 4.34
118 119 3.767230 CTGTTGTCGCTGCCGTCG 61.767 66.667 0.00 0.00 35.54 5.12
119 120 4.077188 GCTGTTGTCGCTGCCGTC 62.077 66.667 0.00 0.00 35.54 4.79
127 128 3.777925 CCGAAGGCGCTGTTGTCG 61.778 66.667 7.64 9.39 46.14 4.35
139 140 2.240500 GCCGTAGAGCATGCCGAAG 61.241 63.158 15.66 4.78 0.00 3.79
140 141 2.202878 GCCGTAGAGCATGCCGAA 60.203 61.111 15.66 0.00 0.00 4.30
141 142 4.221422 GGCCGTAGAGCATGCCGA 62.221 66.667 15.66 0.00 33.59 5.54
143 144 2.590007 CAGGCCGTAGAGCATGCC 60.590 66.667 15.66 6.03 44.35 4.40
152 153 2.062177 GCCCCTTCTACAGGCCGTA 61.062 63.158 0.00 1.87 42.29 4.02
153 154 3.400054 GCCCCTTCTACAGGCCGT 61.400 66.667 0.00 0.49 42.29 5.68
154 155 3.391665 CTGCCCCTTCTACAGGCCG 62.392 68.421 0.00 0.00 46.55 6.13
155 156 2.592308 CTGCCCCTTCTACAGGCC 59.408 66.667 0.00 0.00 46.55 5.19
157 158 2.187946 CGCTGCCCCTTCTACAGG 59.812 66.667 0.00 0.00 43.49 4.00
158 159 2.187946 CCGCTGCCCCTTCTACAG 59.812 66.667 0.00 0.00 34.48 2.74
159 160 2.284331 TCCGCTGCCCCTTCTACA 60.284 61.111 0.00 0.00 0.00 2.74
160 161 2.187163 GTCCGCTGCCCCTTCTAC 59.813 66.667 0.00 0.00 0.00 2.59
161 162 3.458163 CGTCCGCTGCCCCTTCTA 61.458 66.667 0.00 0.00 0.00 2.10
173 174 3.261951 CTATTGCGCCACCGTCCG 61.262 66.667 4.18 0.00 36.67 4.79
174 175 1.303091 AAACTATTGCGCCACCGTCC 61.303 55.000 4.18 0.00 36.67 4.79
175 176 0.519961 AAAACTATTGCGCCACCGTC 59.480 50.000 4.18 0.00 36.67 4.79
176 177 1.735571 CTAAAACTATTGCGCCACCGT 59.264 47.619 4.18 0.00 36.67 4.83
177 178 1.735571 ACTAAAACTATTGCGCCACCG 59.264 47.619 4.18 0.00 37.57 4.94
178 179 3.842732 AACTAAAACTATTGCGCCACC 57.157 42.857 4.18 0.00 0.00 4.61
179 180 5.875930 ACATAACTAAAACTATTGCGCCAC 58.124 37.500 4.18 0.00 0.00 5.01
180 181 6.503589 AACATAACTAAAACTATTGCGCCA 57.496 33.333 4.18 0.00 0.00 5.69
181 182 7.806149 AAAACATAACTAAAACTATTGCGCC 57.194 32.000 4.18 0.00 0.00 6.53
225 226 9.891828 GGCGATTTCATTGATATTTGTACATAA 57.108 29.630 0.00 0.00 0.00 1.90
226 227 9.283768 AGGCGATTTCATTGATATTTGTACATA 57.716 29.630 0.00 0.00 0.00 2.29
227 228 8.169977 AGGCGATTTCATTGATATTTGTACAT 57.830 30.769 0.00 0.00 0.00 2.29
228 229 7.566760 AGGCGATTTCATTGATATTTGTACA 57.433 32.000 0.00 0.00 0.00 2.90
229 230 8.774586 ACTAGGCGATTTCATTGATATTTGTAC 58.225 33.333 0.00 0.00 0.00 2.90
230 231 8.902540 ACTAGGCGATTTCATTGATATTTGTA 57.097 30.769 0.00 0.00 0.00 2.41
231 232 7.807977 ACTAGGCGATTTCATTGATATTTGT 57.192 32.000 0.00 0.00 0.00 2.83
232 233 8.961092 CAAACTAGGCGATTTCATTGATATTTG 58.039 33.333 0.00 0.00 0.00 2.32
233 234 8.902806 TCAAACTAGGCGATTTCATTGATATTT 58.097 29.630 0.00 0.00 0.00 1.40
234 235 8.345565 GTCAAACTAGGCGATTTCATTGATATT 58.654 33.333 0.00 0.00 0.00 1.28
235 236 7.041098 GGTCAAACTAGGCGATTTCATTGATAT 60.041 37.037 0.00 0.00 0.00 1.63
236 237 6.260050 GGTCAAACTAGGCGATTTCATTGATA 59.740 38.462 0.00 0.00 0.00 2.15
237 238 5.066505 GGTCAAACTAGGCGATTTCATTGAT 59.933 40.000 0.00 0.00 0.00 2.57
238 239 4.394920 GGTCAAACTAGGCGATTTCATTGA 59.605 41.667 0.00 0.00 0.00 2.57
239 240 4.662145 GGTCAAACTAGGCGATTTCATTG 58.338 43.478 0.00 0.00 0.00 2.82
240 241 3.374058 CGGTCAAACTAGGCGATTTCATT 59.626 43.478 0.00 0.00 0.00 2.57
241 242 2.936498 CGGTCAAACTAGGCGATTTCAT 59.064 45.455 0.00 0.00 0.00 2.57
242 243 2.028839 TCGGTCAAACTAGGCGATTTCA 60.029 45.455 0.00 0.00 0.00 2.69
243 244 2.613691 TCGGTCAAACTAGGCGATTTC 58.386 47.619 0.00 0.00 0.00 2.17
244 245 2.754946 TCGGTCAAACTAGGCGATTT 57.245 45.000 0.00 0.00 0.00 2.17
245 246 2.754946 TTCGGTCAAACTAGGCGATT 57.245 45.000 0.00 0.00 0.00 3.34
246 247 2.981859 ATTCGGTCAAACTAGGCGAT 57.018 45.000 0.00 0.00 0.00 4.58
247 248 3.131577 ACATATTCGGTCAAACTAGGCGA 59.868 43.478 0.00 0.00 0.00 5.54
248 249 3.245284 CACATATTCGGTCAAACTAGGCG 59.755 47.826 0.00 0.00 0.00 5.52
249 250 4.189231 ACACATATTCGGTCAAACTAGGC 58.811 43.478 0.00 0.00 0.00 3.93
250 251 4.503007 CGACACATATTCGGTCAAACTAGG 59.497 45.833 0.00 0.00 32.66 3.02
251 252 5.004440 CACGACACATATTCGGTCAAACTAG 59.996 44.000 0.00 0.00 40.92 2.57
252 253 4.860352 CACGACACATATTCGGTCAAACTA 59.140 41.667 0.00 0.00 40.92 2.24
253 254 3.678072 CACGACACATATTCGGTCAAACT 59.322 43.478 0.00 0.00 40.92 2.66
254 255 3.430895 ACACGACACATATTCGGTCAAAC 59.569 43.478 0.00 0.00 40.92 2.93
255 256 3.655486 ACACGACACATATTCGGTCAAA 58.345 40.909 0.00 0.00 40.92 2.69
256 257 3.306917 ACACGACACATATTCGGTCAA 57.693 42.857 0.00 0.00 40.92 3.18
257 258 3.306917 AACACGACACATATTCGGTCA 57.693 42.857 0.00 0.00 40.92 4.02
258 259 3.181524 CCAAACACGACACATATTCGGTC 60.182 47.826 0.00 0.00 40.92 4.79
259 260 2.739913 CCAAACACGACACATATTCGGT 59.260 45.455 0.00 0.00 40.92 4.69
260 261 2.475519 GCCAAACACGACACATATTCGG 60.476 50.000 0.00 0.00 40.92 4.30
261 262 2.475519 GGCCAAACACGACACATATTCG 60.476 50.000 0.00 0.00 42.36 3.34
262 263 2.475519 CGGCCAAACACGACACATATTC 60.476 50.000 2.24 0.00 0.00 1.75
263 264 1.466950 CGGCCAAACACGACACATATT 59.533 47.619 2.24 0.00 0.00 1.28
264 265 1.083489 CGGCCAAACACGACACATAT 58.917 50.000 2.24 0.00 0.00 1.78
265 266 0.033642 TCGGCCAAACACGACACATA 59.966 50.000 2.24 0.00 33.69 2.29
266 267 0.816018 TTCGGCCAAACACGACACAT 60.816 50.000 2.24 0.00 39.04 3.21
267 268 0.816018 ATTCGGCCAAACACGACACA 60.816 50.000 2.24 0.00 39.04 3.72
268 269 0.309612 AATTCGGCCAAACACGACAC 59.690 50.000 2.24 0.00 39.04 3.67
269 270 1.025812 AAATTCGGCCAAACACGACA 58.974 45.000 2.24 0.00 39.04 4.35
270 271 1.784283 CAAAATTCGGCCAAACACGAC 59.216 47.619 2.24 0.00 39.04 4.34
271 272 1.676529 TCAAAATTCGGCCAAACACGA 59.323 42.857 2.24 0.00 37.33 4.35
272 273 1.784283 GTCAAAATTCGGCCAAACACG 59.216 47.619 2.24 0.00 0.00 4.49
273 274 2.131972 GGTCAAAATTCGGCCAAACAC 58.868 47.619 2.24 0.00 0.00 3.32
274 275 1.269309 CGGTCAAAATTCGGCCAAACA 60.269 47.619 2.24 0.00 0.00 2.83
275 276 1.001158 TCGGTCAAAATTCGGCCAAAC 60.001 47.619 2.24 0.00 0.00 2.93
276 277 1.268352 CTCGGTCAAAATTCGGCCAAA 59.732 47.619 2.24 0.00 0.00 3.28
277 278 0.878416 CTCGGTCAAAATTCGGCCAA 59.122 50.000 2.24 0.00 0.00 4.52
278 279 0.250553 ACTCGGTCAAAATTCGGCCA 60.251 50.000 2.24 0.00 0.00 5.36
279 280 0.879090 AACTCGGTCAAAATTCGGCC 59.121 50.000 0.00 0.00 0.00 6.13
280 281 2.699251 AAACTCGGTCAAAATTCGGC 57.301 45.000 0.00 0.00 0.00 5.54
281 282 7.380065 TGAAAAATAAACTCGGTCAAAATTCGG 59.620 33.333 0.00 0.00 0.00 4.30
282 283 8.276060 TGAAAAATAAACTCGGTCAAAATTCG 57.724 30.769 0.00 0.00 0.00 3.34
308 309 2.190841 CACCCCAGCCGACGTTTTT 61.191 57.895 0.00 0.00 0.00 1.94
309 310 2.593436 CACCCCAGCCGACGTTTT 60.593 61.111 0.00 0.00 0.00 2.43
310 311 3.530910 CTCACCCCAGCCGACGTTT 62.531 63.158 0.00 0.00 0.00 3.60
311 312 4.003788 CTCACCCCAGCCGACGTT 62.004 66.667 0.00 0.00 0.00 3.99
314 315 4.021925 AAGCTCACCCCAGCCGAC 62.022 66.667 0.00 0.00 40.65 4.79
315 316 4.020617 CAAGCTCACCCCAGCCGA 62.021 66.667 0.00 0.00 40.65 5.54
317 318 4.748144 CCCAAGCTCACCCCAGCC 62.748 72.222 0.00 0.00 40.65 4.85
318 319 4.748144 CCCCAAGCTCACCCCAGC 62.748 72.222 0.00 0.00 39.99 4.85
319 320 4.748144 GCCCCAAGCTCACCCCAG 62.748 72.222 0.00 0.00 38.99 4.45
341 342 2.404186 GGGCGATCGGTTTCCCAAC 61.404 63.158 19.95 0.00 38.62 3.77
342 343 2.045731 GGGCGATCGGTTTCCCAA 60.046 61.111 19.95 0.00 38.62 4.12
343 344 4.104183 GGGGCGATCGGTTTCCCA 62.104 66.667 24.31 0.00 40.53 4.37
344 345 3.415650 ATGGGGCGATCGGTTTCCC 62.416 63.158 18.30 17.83 38.03 3.97
345 346 2.186826 CATGGGGCGATCGGTTTCC 61.187 63.158 18.30 9.14 0.00 3.13
346 347 2.834618 GCATGGGGCGATCGGTTTC 61.835 63.158 18.30 0.00 0.00 2.78
347 348 2.828549 GCATGGGGCGATCGGTTT 60.829 61.111 18.30 0.00 0.00 3.27
348 349 4.875713 GGCATGGGGCGATCGGTT 62.876 66.667 18.30 0.00 46.16 4.44
366 367 2.135933 CTCCCTGTCGGCGAAATTATC 58.864 52.381 12.92 0.00 0.00 1.75
367 368 1.810412 GCTCCCTGTCGGCGAAATTAT 60.810 52.381 12.92 0.00 0.00 1.28
368 369 0.461339 GCTCCCTGTCGGCGAAATTA 60.461 55.000 12.92 0.00 0.00 1.40
369 370 1.745489 GCTCCCTGTCGGCGAAATT 60.745 57.895 12.92 0.00 0.00 1.82
370 371 2.125106 GCTCCCTGTCGGCGAAAT 60.125 61.111 12.92 0.00 0.00 2.17
389 390 2.682582 GAAATAGAGCCGCCTGGGGG 62.683 65.000 24.52 24.52 38.76 5.40
390 391 1.227973 GAAATAGAGCCGCCTGGGG 60.228 63.158 3.33 3.33 35.78 4.96
391 392 0.107214 TTGAAATAGAGCCGCCTGGG 60.107 55.000 0.00 0.00 39.58 4.45
392 393 1.303309 CTTGAAATAGAGCCGCCTGG 58.697 55.000 0.00 0.00 38.77 4.45
393 394 0.659957 GCTTGAAATAGAGCCGCCTG 59.340 55.000 0.00 0.00 32.80 4.85
394 395 3.086733 GCTTGAAATAGAGCCGCCT 57.913 52.632 0.00 0.00 32.80 5.52
399 400 2.706190 TCCCTAGGGCTTGAAATAGAGC 59.294 50.000 24.42 0.00 38.17 4.09
400 401 3.326297 CCTCCCTAGGGCTTGAAATAGAG 59.674 52.174 24.42 10.74 39.48 2.43
401 402 3.318313 CCTCCCTAGGGCTTGAAATAGA 58.682 50.000 24.42 0.11 39.48 1.98
402 403 2.224646 GCCTCCCTAGGGCTTGAAATAG 60.225 54.545 24.42 12.24 45.57 1.73
403 404 1.774856 GCCTCCCTAGGGCTTGAAATA 59.225 52.381 24.42 1.74 45.57 1.40
404 405 0.553333 GCCTCCCTAGGGCTTGAAAT 59.447 55.000 24.42 0.00 45.57 2.17
405 406 1.910580 CGCCTCCCTAGGGCTTGAAA 61.911 60.000 24.42 3.40 46.73 2.69
406 407 2.367202 CGCCTCCCTAGGGCTTGAA 61.367 63.158 24.42 4.23 46.73 2.69
407 408 2.764128 CGCCTCCCTAGGGCTTGA 60.764 66.667 24.42 4.66 46.73 3.02
408 409 2.367202 TTCGCCTCCCTAGGGCTTG 61.367 63.158 24.42 14.26 46.73 4.01
409 410 2.040606 TTCGCCTCCCTAGGGCTT 59.959 61.111 24.42 0.00 46.73 4.35
410 411 2.764547 GTTCGCCTCCCTAGGGCT 60.765 66.667 24.42 0.00 46.73 5.19
411 412 4.222847 CGTTCGCCTCCCTAGGGC 62.223 72.222 24.42 10.79 43.87 5.19
412 413 3.537874 CCGTTCGCCTCCCTAGGG 61.538 72.222 23.22 23.22 43.87 3.53
413 414 4.222847 GCCGTTCGCCTCCCTAGG 62.223 72.222 0.06 0.06 46.76 3.02
414 415 3.148279 AGCCGTTCGCCTCCCTAG 61.148 66.667 0.00 0.00 38.78 3.02
415 416 3.458163 CAGCCGTTCGCCTCCCTA 61.458 66.667 0.00 0.00 38.78 3.53
418 419 4.821589 CTCCAGCCGTTCGCCTCC 62.822 72.222 0.00 0.00 38.78 4.30
419 420 3.760035 TCTCCAGCCGTTCGCCTC 61.760 66.667 0.00 0.00 38.78 4.70
420 421 4.070552 GTCTCCAGCCGTTCGCCT 62.071 66.667 0.00 0.00 38.78 5.52
423 424 4.421479 AGCGTCTCCAGCCGTTCG 62.421 66.667 0.00 0.00 34.64 3.95
424 425 1.654954 TAGAGCGTCTCCAGCCGTTC 61.655 60.000 3.66 0.00 34.98 3.95
425 426 1.248785 TTAGAGCGTCTCCAGCCGTT 61.249 55.000 3.66 0.00 34.64 4.44
426 427 1.677966 TTAGAGCGTCTCCAGCCGT 60.678 57.895 3.66 0.00 34.64 5.68
427 428 1.226717 GTTAGAGCGTCTCCAGCCG 60.227 63.158 3.66 0.00 34.64 5.52
428 429 1.142097 GGTTAGAGCGTCTCCAGCC 59.858 63.158 3.66 0.00 34.64 4.85
429 430 1.335496 CTAGGTTAGAGCGTCTCCAGC 59.665 57.143 3.66 1.91 0.00 4.85
430 431 2.614983 GACTAGGTTAGAGCGTCTCCAG 59.385 54.545 0.00 0.00 0.00 3.86
431 432 2.641305 GACTAGGTTAGAGCGTCTCCA 58.359 52.381 0.00 0.00 0.00 3.86
432 433 1.598601 CGACTAGGTTAGAGCGTCTCC 59.401 57.143 0.00 0.00 0.00 3.71
433 434 1.003652 GCGACTAGGTTAGAGCGTCTC 60.004 57.143 0.00 0.00 32.70 3.36
434 435 1.015868 GCGACTAGGTTAGAGCGTCT 58.984 55.000 0.00 0.00 32.70 4.18
435 436 0.029167 GGCGACTAGGTTAGAGCGTC 59.971 60.000 0.00 0.00 35.21 5.19
436 437 0.394080 AGGCGACTAGGTTAGAGCGT 60.394 55.000 0.00 0.00 40.61 5.07
437 438 0.739561 AAGGCGACTAGGTTAGAGCG 59.260 55.000 0.00 0.00 42.68 5.03
438 439 1.202428 CCAAGGCGACTAGGTTAGAGC 60.202 57.143 0.00 0.00 42.68 4.09
439 440 1.409427 CCCAAGGCGACTAGGTTAGAG 59.591 57.143 0.00 0.00 42.68 2.43
440 441 1.006281 TCCCAAGGCGACTAGGTTAGA 59.994 52.381 7.13 0.00 42.68 2.10
441 442 1.409427 CTCCCAAGGCGACTAGGTTAG 59.591 57.143 7.13 0.00 42.68 2.34
442 443 1.272872 ACTCCCAAGGCGACTAGGTTA 60.273 52.381 7.13 0.00 42.68 2.85
443 444 0.544595 ACTCCCAAGGCGACTAGGTT 60.545 55.000 7.13 0.00 42.68 3.50
444 445 0.971447 GACTCCCAAGGCGACTAGGT 60.971 60.000 7.13 0.00 42.68 3.08
445 446 1.817209 GACTCCCAAGGCGACTAGG 59.183 63.158 0.00 0.00 42.68 3.02
452 453 1.374758 CACAGACGACTCCCAAGGC 60.375 63.158 0.00 0.00 0.00 4.35
453 454 1.374758 GCACAGACGACTCCCAAGG 60.375 63.158 0.00 0.00 0.00 3.61
454 455 0.036952 ATGCACAGACGACTCCCAAG 60.037 55.000 0.00 0.00 0.00 3.61
455 456 0.320683 CATGCACAGACGACTCCCAA 60.321 55.000 0.00 0.00 0.00 4.12
456 457 1.184970 TCATGCACAGACGACTCCCA 61.185 55.000 0.00 0.00 0.00 4.37
457 458 0.037326 TTCATGCACAGACGACTCCC 60.037 55.000 0.00 0.00 0.00 4.30
458 459 1.795768 TTTCATGCACAGACGACTCC 58.204 50.000 0.00 0.00 0.00 3.85
459 460 3.878086 TTTTTCATGCACAGACGACTC 57.122 42.857 0.00 0.00 0.00 3.36
487 488 2.753966 CCAATTGAGCACGCCCTCG 61.754 63.158 7.12 0.00 42.43 4.63
488 489 1.675641 ACCAATTGAGCACGCCCTC 60.676 57.895 7.12 0.00 0.00 4.30
489 490 1.973281 CACCAATTGAGCACGCCCT 60.973 57.895 7.12 0.00 0.00 5.19
490 491 2.568090 CACCAATTGAGCACGCCC 59.432 61.111 7.12 0.00 0.00 6.13
491 492 2.568090 CCACCAATTGAGCACGCC 59.432 61.111 7.12 0.00 0.00 5.68
492 493 2.126346 GCCACCAATTGAGCACGC 60.126 61.111 7.12 0.00 0.00 5.34
493 494 2.568090 GGCCACCAATTGAGCACG 59.432 61.111 7.12 0.00 0.00 5.34
494 495 1.907807 TGGGCCACCAATTGAGCAC 60.908 57.895 0.00 8.62 45.87 4.40
495 496 2.525075 TGGGCCACCAATTGAGCA 59.475 55.556 0.00 0.00 45.87 4.26
503 504 2.841988 GGCTTTGTTGGGCCACCA 60.842 61.111 5.23 0.85 46.84 4.17
507 508 3.379608 CCATCAAGGCTTTGTTGGGCC 62.380 57.143 24.16 0.00 44.82 5.80
508 509 0.037046 CCATCAAGGCTTTGTTGGGC 60.037 55.000 24.16 0.00 44.82 5.36
509 510 1.273327 GTCCATCAAGGCTTTGTTGGG 59.727 52.381 28.54 18.91 46.91 4.12
511 512 1.879380 TCGTCCATCAAGGCTTTGTTG 59.121 47.619 8.56 10.26 37.29 3.33
512 513 2.154462 CTCGTCCATCAAGGCTTTGTT 58.846 47.619 8.56 0.00 37.29 2.83
513 514 1.347707 TCTCGTCCATCAAGGCTTTGT 59.652 47.619 8.56 0.00 37.29 2.83
514 515 1.734465 GTCTCGTCCATCAAGGCTTTG 59.266 52.381 1.35 1.35 37.29 2.77
515 516 1.625818 AGTCTCGTCCATCAAGGCTTT 59.374 47.619 0.00 0.00 37.29 3.51
516 517 1.270907 AGTCTCGTCCATCAAGGCTT 58.729 50.000 0.00 0.00 37.29 4.35
517 518 1.066573 CAAGTCTCGTCCATCAAGGCT 60.067 52.381 0.00 0.00 37.29 4.58
518 519 1.363744 CAAGTCTCGTCCATCAAGGC 58.636 55.000 0.00 0.00 37.29 4.35
519 520 1.363744 GCAAGTCTCGTCCATCAAGG 58.636 55.000 0.00 0.00 39.47 3.61
520 521 1.066573 AGGCAAGTCTCGTCCATCAAG 60.067 52.381 0.00 0.00 0.00 3.02
521 522 0.976641 AGGCAAGTCTCGTCCATCAA 59.023 50.000 0.00 0.00 0.00 2.57
522 523 0.247460 CAGGCAAGTCTCGTCCATCA 59.753 55.000 0.00 0.00 0.00 3.07
523 524 1.086634 GCAGGCAAGTCTCGTCCATC 61.087 60.000 0.00 0.00 0.00 3.51
524 525 1.078848 GCAGGCAAGTCTCGTCCAT 60.079 57.895 0.00 0.00 0.00 3.41
525 526 2.159819 GAGCAGGCAAGTCTCGTCCA 62.160 60.000 0.00 0.00 0.00 4.02
526 527 1.446966 GAGCAGGCAAGTCTCGTCC 60.447 63.158 0.00 0.00 0.00 4.79
527 528 1.446966 GGAGCAGGCAAGTCTCGTC 60.447 63.158 0.00 0.00 0.00 4.20
528 529 1.882989 GAGGAGCAGGCAAGTCTCGT 61.883 60.000 0.00 0.00 0.00 4.18
529 530 1.153667 GAGGAGCAGGCAAGTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
530 531 1.220477 GGAGGAGCAGGCAAGTCTC 59.780 63.158 0.00 0.00 0.00 3.36
531 532 2.297129 GGGAGGAGCAGGCAAGTCT 61.297 63.158 0.00 0.00 0.00 3.24
532 533 2.270527 GGGAGGAGCAGGCAAGTC 59.729 66.667 0.00 0.00 0.00 3.01
533 534 3.710722 CGGGAGGAGCAGGCAAGT 61.711 66.667 0.00 0.00 0.00 3.16
542 543 4.436998 GGACACACGCGGGAGGAG 62.437 72.222 19.19 4.06 0.00 3.69
544 545 4.082523 ATGGACACACGCGGGAGG 62.083 66.667 19.19 9.72 0.00 4.30
545 546 2.509336 GATGGACACACGCGGGAG 60.509 66.667 19.19 10.92 0.00 4.30
546 547 4.077184 GGATGGACACACGCGGGA 62.077 66.667 19.19 0.00 0.00 5.14
548 549 4.735132 ACGGATGGACACACGCGG 62.735 66.667 12.47 1.27 0.00 6.46
549 550 3.478394 CACGGATGGACACACGCG 61.478 66.667 3.53 3.53 0.00 6.01
550 551 3.788766 GCACGGATGGACACACGC 61.789 66.667 0.00 0.00 0.00 5.34
551 552 2.048222 AGCACGGATGGACACACG 60.048 61.111 0.00 0.00 0.00 4.49
552 553 1.741770 GGAGCACGGATGGACACAC 60.742 63.158 0.00 0.00 0.00 3.82
553 554 2.662596 GGAGCACGGATGGACACA 59.337 61.111 0.00 0.00 0.00 3.72
554 555 2.125106 GGGAGCACGGATGGACAC 60.125 66.667 0.00 0.00 0.00 3.67
555 556 3.770040 CGGGAGCACGGATGGACA 61.770 66.667 0.00 0.00 0.00 4.02
567 568 4.430765 AAGCCACGTACGCGGGAG 62.431 66.667 25.61 2.82 45.97 4.30
568 569 4.728102 CAAGCCACGTACGCGGGA 62.728 66.667 25.61 0.00 45.97 5.14
569 570 4.728102 TCAAGCCACGTACGCGGG 62.728 66.667 22.89 20.94 43.45 6.13
570 571 1.632046 AAATCAAGCCACGTACGCGG 61.632 55.000 17.94 17.94 43.45 6.46
571 572 0.518355 CAAATCAAGCCACGTACGCG 60.518 55.000 16.72 3.53 44.93 6.01
572 573 0.793861 TCAAATCAAGCCACGTACGC 59.206 50.000 16.72 0.00 0.00 4.42
573 574 3.416277 CAATCAAATCAAGCCACGTACG 58.584 45.455 15.01 15.01 0.00 3.67
574 575 3.438781 TCCAATCAAATCAAGCCACGTAC 59.561 43.478 0.00 0.00 0.00 3.67
575 576 3.680490 TCCAATCAAATCAAGCCACGTA 58.320 40.909 0.00 0.00 0.00 3.57
576 577 2.513753 TCCAATCAAATCAAGCCACGT 58.486 42.857 0.00 0.00 0.00 4.49
577 578 3.244976 GTTCCAATCAAATCAAGCCACG 58.755 45.455 0.00 0.00 0.00 4.94
578 579 4.255833 TGTTCCAATCAAATCAAGCCAC 57.744 40.909 0.00 0.00 0.00 5.01
579 580 4.952071 TTGTTCCAATCAAATCAAGCCA 57.048 36.364 0.00 0.00 0.00 4.75
580 581 6.806388 ATTTTGTTCCAATCAAATCAAGCC 57.194 33.333 0.00 0.00 35.25 4.35
581 582 9.206870 TCTTATTTTGTTCCAATCAAATCAAGC 57.793 29.630 0.00 0.00 35.25 4.01
584 585 9.487790 GGTTCTTATTTTGTTCCAATCAAATCA 57.512 29.630 0.00 0.00 35.25 2.57
585 586 8.647226 CGGTTCTTATTTTGTTCCAATCAAATC 58.353 33.333 0.00 0.00 35.25 2.17
586 587 8.147704 ACGGTTCTTATTTTGTTCCAATCAAAT 58.852 29.630 0.00 0.00 35.25 2.32
587 588 7.493367 ACGGTTCTTATTTTGTTCCAATCAAA 58.507 30.769 0.00 0.00 33.76 2.69
588 589 7.013846 AGACGGTTCTTATTTTGTTCCAATCAA 59.986 33.333 0.00 0.00 0.00 2.57
589 590 6.488683 AGACGGTTCTTATTTTGTTCCAATCA 59.511 34.615 0.00 0.00 0.00 2.57
590 591 6.909909 AGACGGTTCTTATTTTGTTCCAATC 58.090 36.000 0.00 0.00 0.00 2.67
591 592 6.488683 TGAGACGGTTCTTATTTTGTTCCAAT 59.511 34.615 0.00 0.00 29.47 3.16
592 593 5.823570 TGAGACGGTTCTTATTTTGTTCCAA 59.176 36.000 0.00 0.00 29.47 3.53
593 594 5.237779 GTGAGACGGTTCTTATTTTGTTCCA 59.762 40.000 0.00 0.00 29.47 3.53
594 595 5.334646 GGTGAGACGGTTCTTATTTTGTTCC 60.335 44.000 0.00 0.00 29.47 3.62
595 596 5.334646 GGGTGAGACGGTTCTTATTTTGTTC 60.335 44.000 0.00 0.00 29.47 3.18
596 597 4.517832 GGGTGAGACGGTTCTTATTTTGTT 59.482 41.667 0.00 0.00 29.47 2.83
597 598 4.070009 GGGTGAGACGGTTCTTATTTTGT 58.930 43.478 0.00 0.00 29.47 2.83
598 599 4.324267 AGGGTGAGACGGTTCTTATTTTG 58.676 43.478 0.00 0.00 29.47 2.44
599 600 4.286291 AGAGGGTGAGACGGTTCTTATTTT 59.714 41.667 0.00 0.00 29.47 1.82
600 601 3.838903 AGAGGGTGAGACGGTTCTTATTT 59.161 43.478 0.00 0.00 29.47 1.40
601 602 3.442076 AGAGGGTGAGACGGTTCTTATT 58.558 45.455 0.00 0.00 29.47 1.40
602 603 3.103080 AGAGGGTGAGACGGTTCTTAT 57.897 47.619 0.00 0.00 29.47 1.73
603 604 2.599408 AGAGGGTGAGACGGTTCTTA 57.401 50.000 0.00 0.00 29.47 2.10
604 605 1.718280 AAGAGGGTGAGACGGTTCTT 58.282 50.000 0.00 0.00 29.47 2.52
605 606 2.599408 TAAGAGGGTGAGACGGTTCT 57.401 50.000 0.00 0.00 33.37 3.01
606 607 3.672767 TTTAAGAGGGTGAGACGGTTC 57.327 47.619 0.00 0.00 0.00 3.62
607 608 4.041198 TGATTTTAAGAGGGTGAGACGGTT 59.959 41.667 0.00 0.00 0.00 4.44
608 609 3.581332 TGATTTTAAGAGGGTGAGACGGT 59.419 43.478 0.00 0.00 0.00 4.83
609 610 4.202245 TGATTTTAAGAGGGTGAGACGG 57.798 45.455 0.00 0.00 0.00 4.79
610 611 4.572389 CCATGATTTTAAGAGGGTGAGACG 59.428 45.833 0.00 0.00 0.00 4.18
611 612 4.884164 CCCATGATTTTAAGAGGGTGAGAC 59.116 45.833 0.00 0.00 0.00 3.36
612 613 4.079787 CCCCATGATTTTAAGAGGGTGAGA 60.080 45.833 0.00 0.00 34.44 3.27
613 614 4.210331 CCCCATGATTTTAAGAGGGTGAG 58.790 47.826 0.00 0.00 34.44 3.51
614 615 3.052944 CCCCCATGATTTTAAGAGGGTGA 60.053 47.826 0.00 0.00 34.44 4.02
615 616 3.299503 CCCCCATGATTTTAAGAGGGTG 58.700 50.000 0.00 0.00 34.44 4.61
616 617 3.688049 CCCCCATGATTTTAAGAGGGT 57.312 47.619 0.00 0.00 34.44 4.34
656 657 5.049405 CACTTCATTCTACGGCTGTCTTTTT 60.049 40.000 0.00 0.00 0.00 1.94
657 658 4.452455 CACTTCATTCTACGGCTGTCTTTT 59.548 41.667 0.00 0.00 0.00 2.27
658 659 3.997021 CACTTCATTCTACGGCTGTCTTT 59.003 43.478 0.00 0.00 0.00 2.52
659 660 3.589988 CACTTCATTCTACGGCTGTCTT 58.410 45.455 0.00 0.00 0.00 3.01
660 661 2.093973 CCACTTCATTCTACGGCTGTCT 60.094 50.000 0.00 0.00 0.00 3.41
661 662 2.271800 CCACTTCATTCTACGGCTGTC 58.728 52.381 0.00 0.00 0.00 3.51
662 663 1.066143 CCCACTTCATTCTACGGCTGT 60.066 52.381 2.42 2.42 0.00 4.40
663 664 1.207089 TCCCACTTCATTCTACGGCTG 59.793 52.381 0.00 0.00 0.00 4.85
664 665 1.568504 TCCCACTTCATTCTACGGCT 58.431 50.000 0.00 0.00 0.00 5.52
665 666 2.007608 GTTCCCACTTCATTCTACGGC 58.992 52.381 0.00 0.00 0.00 5.68
666 667 3.000727 GTGTTCCCACTTCATTCTACGG 58.999 50.000 0.00 0.00 38.61 4.02
667 668 2.666508 CGTGTTCCCACTTCATTCTACG 59.333 50.000 0.00 0.00 39.55 3.51
668 669 3.921677 TCGTGTTCCCACTTCATTCTAC 58.078 45.455 0.00 0.00 39.55 2.59
669 670 4.610605 TTCGTGTTCCCACTTCATTCTA 57.389 40.909 0.00 0.00 39.55 2.10
670 671 3.485463 TTCGTGTTCCCACTTCATTCT 57.515 42.857 0.00 0.00 39.55 2.40
671 672 3.751175 TCATTCGTGTTCCCACTTCATTC 59.249 43.478 0.00 0.00 39.55 2.67
672 673 3.750371 TCATTCGTGTTCCCACTTCATT 58.250 40.909 0.00 0.00 39.55 2.57
673 674 3.417069 TCATTCGTGTTCCCACTTCAT 57.583 42.857 0.00 0.00 39.55 2.57
674 675 2.920724 TCATTCGTGTTCCCACTTCA 57.079 45.000 0.00 0.00 39.55 3.02
675 676 3.609409 GCTTTCATTCGTGTTCCCACTTC 60.609 47.826 0.00 0.00 39.55 3.01
676 677 2.293399 GCTTTCATTCGTGTTCCCACTT 59.707 45.455 0.00 0.00 39.55 3.16
677 678 1.880027 GCTTTCATTCGTGTTCCCACT 59.120 47.619 0.00 0.00 39.55 4.00
678 679 1.606668 TGCTTTCATTCGTGTTCCCAC 59.393 47.619 0.00 0.00 38.27 4.61
679 680 1.974265 TGCTTTCATTCGTGTTCCCA 58.026 45.000 0.00 0.00 0.00 4.37
680 681 2.487762 TCATGCTTTCATTCGTGTTCCC 59.512 45.455 0.00 0.00 0.00 3.97
681 682 3.426695 CCTCATGCTTTCATTCGTGTTCC 60.427 47.826 0.00 0.00 0.00 3.62
682 683 3.436704 TCCTCATGCTTTCATTCGTGTTC 59.563 43.478 0.00 0.00 0.00 3.18
683 684 3.411446 TCCTCATGCTTTCATTCGTGTT 58.589 40.909 0.00 0.00 0.00 3.32
684 685 3.005554 CTCCTCATGCTTTCATTCGTGT 58.994 45.455 0.00 0.00 0.00 4.49
685 686 2.353889 CCTCCTCATGCTTTCATTCGTG 59.646 50.000 0.00 0.00 0.00 4.35
686 687 2.636830 CCTCCTCATGCTTTCATTCGT 58.363 47.619 0.00 0.00 0.00 3.85
687 688 1.945394 CCCTCCTCATGCTTTCATTCG 59.055 52.381 0.00 0.00 0.00 3.34
688 689 3.212685 CTCCCTCCTCATGCTTTCATTC 58.787 50.000 0.00 0.00 0.00 2.67
689 690 2.686118 GCTCCCTCCTCATGCTTTCATT 60.686 50.000 0.00 0.00 0.00 2.57
690 691 1.133853 GCTCCCTCCTCATGCTTTCAT 60.134 52.381 0.00 0.00 0.00 2.57
691 692 0.254178 GCTCCCTCCTCATGCTTTCA 59.746 55.000 0.00 0.00 0.00 2.69
692 693 0.254178 TGCTCCCTCCTCATGCTTTC 59.746 55.000 0.00 0.00 0.00 2.62
693 694 0.255318 CTGCTCCCTCCTCATGCTTT 59.745 55.000 0.00 0.00 0.00 3.51
694 695 1.633915 CCTGCTCCCTCCTCATGCTT 61.634 60.000 0.00 0.00 0.00 3.91
695 696 2.071262 CCTGCTCCCTCCTCATGCT 61.071 63.158 0.00 0.00 0.00 3.79
696 697 2.509916 CCTGCTCCCTCCTCATGC 59.490 66.667 0.00 0.00 0.00 4.06
697 698 1.918467 TTGCCTGCTCCCTCCTCATG 61.918 60.000 0.00 0.00 0.00 3.07
698 699 1.617536 TTGCCTGCTCCCTCCTCAT 60.618 57.895 0.00 0.00 0.00 2.90
699 700 2.203983 TTGCCTGCTCCCTCCTCA 60.204 61.111 0.00 0.00 0.00 3.86
700 701 2.588989 CTTGCCTGCTCCCTCCTC 59.411 66.667 0.00 0.00 0.00 3.71
701 702 3.726144 GCTTGCCTGCTCCCTCCT 61.726 66.667 0.00 0.00 0.00 3.69
702 703 4.811364 GGCTTGCCTGCTCCCTCC 62.811 72.222 4.11 0.00 0.00 4.30
706 707 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
707 708 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
708 709 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
710 711 4.113815 TGGGATCCGGCTTGCCTG 62.114 66.667 14.28 3.29 0.00 4.85
711 712 4.115199 GTGGGATCCGGCTTGCCT 62.115 66.667 14.28 0.00 0.00 4.75
712 713 3.645268 AAGTGGGATCCGGCTTGCC 62.645 63.158 15.83 1.50 0.00 4.52
713 714 1.250840 AAAAGTGGGATCCGGCTTGC 61.251 55.000 16.88 0.00 0.00 4.01
714 715 0.527565 CAAAAGTGGGATCCGGCTTG 59.472 55.000 16.88 7.86 0.00 4.01
715 716 0.404040 TCAAAAGTGGGATCCGGCTT 59.596 50.000 5.45 9.51 0.00 4.35
716 717 0.322546 GTCAAAAGTGGGATCCGGCT 60.323 55.000 5.45 3.09 0.00 5.52
717 718 1.644786 CGTCAAAAGTGGGATCCGGC 61.645 60.000 5.45 0.42 0.00 6.13
718 719 1.644786 GCGTCAAAAGTGGGATCCGG 61.645 60.000 5.45 0.00 0.00 5.14
719 720 1.644786 GGCGTCAAAAGTGGGATCCG 61.645 60.000 5.45 0.00 0.00 4.18
720 721 1.644786 CGGCGTCAAAAGTGGGATCC 61.645 60.000 1.92 1.92 0.00 3.36
721 722 0.953960 ACGGCGTCAAAAGTGGGATC 60.954 55.000 6.77 0.00 0.00 3.36
722 723 1.072505 ACGGCGTCAAAAGTGGGAT 59.927 52.632 6.77 0.00 0.00 3.85
723 724 1.890041 CACGGCGTCAAAAGTGGGA 60.890 57.895 10.85 0.00 0.00 4.37
724 725 2.637025 CACGGCGTCAAAAGTGGG 59.363 61.111 10.85 0.00 0.00 4.61
725 726 2.637025 CCACGGCGTCAAAAGTGG 59.363 61.111 10.85 2.06 46.52 4.00
782 784 0.463833 GGATGCGACCCCTTAACCAG 60.464 60.000 0.00 0.00 0.00 4.00
783 785 1.605453 GGATGCGACCCCTTAACCA 59.395 57.895 0.00 0.00 0.00 3.67
886 892 0.101579 AAAAACGCAAGGTCGGTTGG 59.898 50.000 0.00 0.00 38.58 3.77
900 906 4.817517 TCTATGGAGGAGTCGTGAAAAAC 58.182 43.478 0.00 0.00 0.00 2.43
906 912 2.496070 TGGTTTCTATGGAGGAGTCGTG 59.504 50.000 0.00 0.00 0.00 4.35
907 913 2.816411 TGGTTTCTATGGAGGAGTCGT 58.184 47.619 0.00 0.00 0.00 4.34
908 914 3.195825 AGTTGGTTTCTATGGAGGAGTCG 59.804 47.826 0.00 0.00 0.00 4.18
909 915 4.223032 TGAGTTGGTTTCTATGGAGGAGTC 59.777 45.833 0.00 0.00 0.00 3.36
912 918 4.565652 GCTTGAGTTGGTTTCTATGGAGGA 60.566 45.833 0.00 0.00 0.00 3.71
913 919 3.691609 GCTTGAGTTGGTTTCTATGGAGG 59.308 47.826 0.00 0.00 0.00 4.30
919 925 3.135712 TCAGGTGCTTGAGTTGGTTTCTA 59.864 43.478 0.00 0.00 0.00 2.10
920 926 2.092429 TCAGGTGCTTGAGTTGGTTTCT 60.092 45.455 0.00 0.00 0.00 2.52
921 927 2.297701 TCAGGTGCTTGAGTTGGTTTC 58.702 47.619 0.00 0.00 0.00 2.78
985 1016 1.746615 CCATGGTCGGCTCCAACTG 60.747 63.158 2.57 0.00 41.09 3.16
997 1028 1.231068 GGGATGTCATGGCCATGGT 59.769 57.895 38.81 26.90 39.24 3.55
1029 1060 0.038526 CGCTCTTGTACCGTTCCAGT 60.039 55.000 0.00 0.00 0.00 4.00
1201 1232 1.069668 GAAGACACGGTTGTACAGGGT 59.930 52.381 0.00 0.00 35.47 4.34
1226 1257 1.962306 GAAACGTACGCCTTGGCCA 60.962 57.895 16.72 0.00 0.00 5.36
1371 1402 2.775032 TTAGGCGCCACGTGACCTTC 62.775 60.000 31.54 8.42 33.60 3.46
1470 1501 2.165380 CACCATGTCCTTGTGCTCG 58.835 57.895 0.00 0.00 0.00 5.03
1825 1856 2.668550 GGTGTTGGACCTGACGCC 60.669 66.667 13.16 13.16 42.25 5.68
1932 1963 3.453679 GAGCTTCCCGTCGCCTCT 61.454 66.667 0.00 0.00 0.00 3.69
2092 3229 5.191426 AGTACTACTACTGGCAAGAATCGA 58.809 41.667 0.00 0.00 31.46 3.59
2112 3249 5.737860 TCAATGTCGGAGTACAGAGTAGTA 58.262 41.667 0.00 0.00 31.70 1.82
2114 3251 5.562506 TTCAATGTCGGAGTACAGAGTAG 57.437 43.478 0.00 0.00 31.70 2.57
2115 3252 5.242171 TGTTTCAATGTCGGAGTACAGAGTA 59.758 40.000 0.00 0.00 31.70 2.59
2128 3594 8.872845 AGAGTTTTGTTTGATTGTTTCAATGTC 58.127 29.630 0.00 0.00 43.73 3.06
2129 3595 8.658609 CAGAGTTTTGTTTGATTGTTTCAATGT 58.341 29.630 0.00 0.00 43.73 2.71
2132 3598 6.593382 CCCAGAGTTTTGTTTGATTGTTTCAA 59.407 34.615 0.00 0.00 42.62 2.69
2251 4414 2.988343 CGACTATAGAGTTGTCGCCTG 58.012 52.381 6.78 0.00 45.88 4.85
2356 4519 1.533731 GGCAACGCACAGCTTAGTTAA 59.466 47.619 0.00 0.00 0.00 2.01
2357 4520 1.153353 GGCAACGCACAGCTTAGTTA 58.847 50.000 0.00 0.00 0.00 2.24
2595 4758 1.801309 CTCGATCTCCGGGAAGAGCC 61.801 65.000 0.00 0.00 42.61 4.70
2620 4783 4.316823 ACCTCCACCTCCCGCAGA 62.317 66.667 0.00 0.00 0.00 4.26
2991 5154 7.360113 TCATGCATAGTGATTTACTCCACTA 57.640 36.000 0.00 0.00 46.15 2.74
2992 5155 6.239217 TCATGCATAGTGATTTACTCCACT 57.761 37.500 0.00 0.00 44.81 4.00
2993 5156 6.925610 TTCATGCATAGTGATTTACTCCAC 57.074 37.500 0.00 0.00 40.89 4.02
2994 5157 7.337938 TCTTTCATGCATAGTGATTTACTCCA 58.662 34.615 0.00 0.00 40.89 3.86
2995 5158 7.792374 TCTTTCATGCATAGTGATTTACTCC 57.208 36.000 0.00 0.00 40.89 3.85
2996 5159 9.495754 GTTTCTTTCATGCATAGTGATTTACTC 57.504 33.333 0.00 0.00 40.89 2.59
3082 5247 2.795297 GAGAGACTGAGTCGGCCG 59.205 66.667 22.12 22.12 37.67 6.13
3088 5253 0.885196 GCACCTTCGAGAGACTGAGT 59.115 55.000 0.00 0.00 41.84 3.41
3101 5266 1.486726 GCCTACACCTATGAGCACCTT 59.513 52.381 0.00 0.00 0.00 3.50
3132 5297 1.541588 GCCAAATTTTCTGACTCCGCT 59.458 47.619 0.00 0.00 0.00 5.52
3139 5304 2.978278 ACCCAATGGCCAAATTTTCTGA 59.022 40.909 10.96 0.00 33.59 3.27
3284 5459 7.328249 TGTCTTGCACTTTTCAGTTTTTAGTTG 59.672 33.333 0.00 0.00 0.00 3.16
3287 5462 7.992180 ATGTCTTGCACTTTTCAGTTTTTAG 57.008 32.000 0.00 0.00 0.00 1.85
3375 5550 9.129209 GGCTATCAAACAGTATTTTTCAAAGAC 57.871 33.333 0.00 0.00 0.00 3.01
3546 5780 5.292834 CAGATCCATAACAACTACAGCTGTG 59.707 44.000 29.57 20.07 0.00 3.66
3551 5785 4.272018 GCTGCAGATCCATAACAACTACAG 59.728 45.833 20.43 0.00 0.00 2.74
3562 5796 1.152943 CAGGCTGCTGCAGATCCAT 60.153 57.895 32.30 10.38 41.91 3.41
3611 5845 1.336755 GATCGACTCTCCTCTTGCTCC 59.663 57.143 0.00 0.00 0.00 4.70
3695 5937 5.454755 GCCTAGACCATGATTAGCCTAACAA 60.455 44.000 0.00 0.00 0.00 2.83
3818 6074 2.649531 TTGATCACTTGAACCCGGTT 57.350 45.000 1.22 1.22 0.00 4.44
3821 6077 5.880054 ACTTATTTGATCACTTGAACCCG 57.120 39.130 0.00 0.00 0.00 5.28
3895 6154 3.730761 CACAACCAGCGGCAGAGC 61.731 66.667 1.45 0.00 37.41 4.09
3896 6155 3.730761 GCACAACCAGCGGCAGAG 61.731 66.667 1.45 0.00 0.00 3.35
3903 6162 1.278637 GTACACACGCACAACCAGC 59.721 57.895 0.00 0.00 0.00 4.85
3904 6163 1.562691 CGTACACACGCACAACCAG 59.437 57.895 0.00 0.00 42.05 4.00
3905 6164 3.707440 CGTACACACGCACAACCA 58.293 55.556 0.00 0.00 42.05 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.