Multiple sequence alignment - TraesCS3B01G256600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G256600 chr3B 100.000 6384 0 0 1 6384 414013586 414019969 0.000000e+00 11790.0
1 TraesCS3B01G256600 chr3B 84.790 309 15 6 3460 3737 332929585 332929278 1.360000e-71 281.0
2 TraesCS3B01G256600 chr3B 90.789 76 3 2 4778 4852 271190801 271190873 1.460000e-16 99.0
3 TraesCS3B01G256600 chr3B 100.000 28 0 0 3900 3927 435292902 435292875 1.200000e-02 52.8
4 TraesCS3B01G256600 chr3D 94.556 3582 121 24 1245 4792 307238439 307234898 0.000000e+00 5467.0
5 TraesCS3B01G256600 chr3D 95.429 1225 34 7 1 1217 307239637 307238427 0.000000e+00 1932.0
6 TraesCS3B01G256600 chr3D 90.585 1009 48 20 4848 5833 307234870 307233886 0.000000e+00 1293.0
7 TraesCS3B01G256600 chr3D 85.437 309 13 6 3460 3737 210621184 210620877 6.260000e-75 292.0
8 TraesCS3B01G256600 chr3D 93.789 161 10 0 5884 6044 307233761 307233601 6.390000e-60 243.0
9 TraesCS3B01G256600 chr3D 86.207 87 6 4 4766 4849 232329279 232329362 8.820000e-14 89.8
10 TraesCS3B01G256600 chr3D 100.000 28 0 0 3900 3927 337526764 337526737 1.200000e-02 52.8
11 TraesCS3B01G256600 chr3A 94.809 1233 33 12 1 1222 426858031 426859243 0.000000e+00 1893.0
12 TraesCS3B01G256600 chr3A 90.540 1427 86 19 2604 3996 426860564 426861975 0.000000e+00 1842.0
13 TraesCS3B01G256600 chr3A 90.584 1147 66 24 1323 2442 426859429 426860560 0.000000e+00 1482.0
14 TraesCS3B01G256600 chr3A 93.325 764 19 14 4848 5579 426862700 426863463 0.000000e+00 1099.0
15 TraesCS3B01G256600 chr3A 96.651 657 19 3 4140 4795 426862025 426862679 0.000000e+00 1088.0
16 TraesCS3B01G256600 chr3A 89.370 254 15 4 5578 5830 426863546 426863788 6.220000e-80 309.0
17 TraesCS3B01G256600 chr3A 84.466 309 13 7 3460 3737 275291717 275292021 8.160000e-69 272.0
18 TraesCS3B01G256600 chr3A 95.031 161 8 0 5884 6044 426863915 426864075 2.950000e-63 254.0
19 TraesCS3B01G256600 chr3A 90.840 131 11 1 6255 6384 426864066 426864196 2.370000e-39 174.0
20 TraesCS3B01G256600 chr3A 89.381 113 9 1 1233 1342 426859222 426859334 8.630000e-29 139.0
21 TraesCS3B01G256600 chr3A 100.000 28 0 0 3900 3927 455028763 455028736 1.200000e-02 52.8
22 TraesCS3B01G256600 chr5D 92.593 162 10 2 2442 2602 461072764 461072604 1.380000e-56 231.0
23 TraesCS3B01G256600 chr5D 91.515 165 14 0 2442 2606 150835730 150835566 1.790000e-55 228.0
24 TraesCS3B01G256600 chr5D 94.030 67 4 0 4784 4850 154533584 154533518 1.130000e-17 102.0
25 TraesCS3B01G256600 chr5D 89.333 75 3 3 4778 4851 313155597 313155667 8.820000e-14 89.8
26 TraesCS3B01G256600 chr4A 90.000 180 16 2 2436 2615 150653480 150653303 1.380000e-56 231.0
27 TraesCS3B01G256600 chr6A 90.533 169 15 1 2442 2609 108947865 108947697 8.330000e-54 222.0
28 TraesCS3B01G256600 chr6A 87.805 82 8 2 4769 4849 485007664 485007744 1.890000e-15 95.3
29 TraesCS3B01G256600 chr7A 90.854 164 15 0 2439 2602 494786825 494786988 3.000000e-53 220.0
30 TraesCS3B01G256600 chr7A 87.037 108 12 2 6136 6242 492238993 492238887 3.130000e-23 121.0
31 TraesCS3B01G256600 chr6D 89.655 174 17 1 2436 2608 460745094 460744921 3.000000e-53 220.0
32 TraesCS3B01G256600 chr6D 87.778 180 22 0 2433 2612 145462453 145462632 1.800000e-50 211.0
33 TraesCS3B01G256600 chr7B 87.500 184 21 2 2434 2617 428829366 428829547 1.800000e-50 211.0
34 TraesCS3B01G256600 chr7B 87.387 111 10 4 6134 6242 458341027 458340919 2.420000e-24 124.0
35 TraesCS3B01G256600 chr2D 90.667 75 5 2 4778 4850 62293281 62293355 1.460000e-16 99.0
36 TraesCS3B01G256600 chr6B 87.654 81 10 0 6159 6239 186702394 186702474 1.890000e-15 95.3
37 TraesCS3B01G256600 chr2B 90.541 74 3 2 4778 4850 474405765 474405695 1.890000e-15 95.3
38 TraesCS3B01G256600 chr2B 90.541 74 3 2 4778 4850 700390910 700390840 1.890000e-15 95.3
39 TraesCS3B01G256600 chr1B 90.541 74 3 2 4778 4850 236023948 236023878 1.890000e-15 95.3
40 TraesCS3B01G256600 chr1B 78.916 166 14 10 4861 5011 67443847 67444006 6.820000e-15 93.5
41 TraesCS3B01G256600 chr1A 78.313 166 15 10 4861 5011 47581485 47581644 3.170000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G256600 chr3B 414013586 414019969 6383 False 11790.00 11790 100.000000 1 6384 1 chr3B.!!$F2 6383
1 TraesCS3B01G256600 chr3D 307233601 307239637 6036 True 2233.75 5467 93.589750 1 6044 4 chr3D.!!$R3 6043
2 TraesCS3B01G256600 chr3A 426858031 426864196 6165 False 920.00 1893 92.281222 1 6384 9 chr3A.!!$F2 6383

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
93 94 1.298014 CCTGTGTTGCTCTCCCTCC 59.702 63.158 0.00 0.0 0.00 4.30 F
98 99 1.306568 GTTGCTCTCCCTCCCCTCT 60.307 63.158 0.00 0.0 0.00 3.69 F
1438 1587 0.591170 AAATTGCCGGTGACTGAACG 59.409 50.000 1.90 0.0 0.00 3.95 F
1441 1590 3.103911 GCCGGTGACTGAACGTCG 61.104 66.667 1.90 0.0 45.87 5.12 F
2602 2790 0.544697 TATTTGGGAACGGAGGGAGC 59.455 55.000 0.00 0.0 0.00 4.70 F
2750 2938 1.068194 TGTGGCGGGCTAAATTTTTCG 60.068 47.619 2.38 0.0 0.00 3.46 F
3430 3625 1.203994 GCAGCAATGGATGAAAGCACT 59.796 47.619 0.00 0.0 30.05 4.40 F
3935 4157 1.838112 TTTGGATGGTAAGCAGGCAG 58.162 50.000 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1087 1109 2.353889 CGTGGAATGCAATCTCTTGAGG 59.646 50.000 1.01 0.0 34.04 3.86 R
1897 2066 2.759191 CAACACTTCAGCAGTAGAGCA 58.241 47.619 0.00 0.0 36.85 4.26 R
2588 2776 0.765510 ATATTGCTCCCTCCGTTCCC 59.234 55.000 0.00 0.0 0.00 3.97 R
3111 3306 1.635487 TGTTAGGATGGCTTCAAGGCT 59.365 47.619 12.92 0.0 41.96 4.58 R
4134 4356 3.052642 AGCATAATCAAATCCCCACAGGT 60.053 43.478 0.00 0.0 36.75 4.00 R
4135 4357 3.569491 AGCATAATCAAATCCCCACAGG 58.431 45.455 0.00 0.0 0.00 4.00 R
4790 5018 0.109723 TTTTGGGACGGAGGGAACAG 59.890 55.000 0.00 0.0 0.00 3.16 R
5848 6200 0.033504 GAGTCTGGTTTCCTCACGCA 59.966 55.000 0.00 0.0 0.00 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 1.298014 CCTGTGTTGCTCTCCCTCC 59.702 63.158 0.00 0.00 0.00 4.30
96 97 1.920835 GTGTTGCTCTCCCTCCCCT 60.921 63.158 0.00 0.00 0.00 4.79
98 99 1.306568 GTTGCTCTCCCTCCCCTCT 60.307 63.158 0.00 0.00 0.00 3.69
102 110 3.036959 TCTCCCTCCCCTCTCCCC 61.037 72.222 0.00 0.00 0.00 4.81
131 139 4.688419 TTGCGCGCTTGCTTGCTC 62.688 61.111 33.29 0.00 36.08 4.26
158 166 3.749064 GTGTGAGCGAGGCCGAGA 61.749 66.667 0.00 0.00 38.22 4.04
159 167 3.749064 TGTGAGCGAGGCCGAGAC 61.749 66.667 0.00 0.00 38.22 3.36
160 168 4.838486 GTGAGCGAGGCCGAGACG 62.838 72.222 0.00 3.56 38.22 4.18
241 249 1.479021 GGTACGTATCTCCCCTGCTCT 60.479 57.143 0.00 0.00 0.00 4.09
275 283 9.404348 CCAAGCTTTAATTTCTCTCTCTTTTTC 57.596 33.333 0.00 0.00 0.00 2.29
288 296 8.198109 TCTCTCTCTTTTTCCCAATAGTATTCG 58.802 37.037 0.00 0.00 0.00 3.34
293 301 5.473796 TTTTCCCAATAGTATTCGTTCGC 57.526 39.130 0.00 0.00 0.00 4.70
334 347 1.612950 TGTGATTGCTGCGGATTTTGT 59.387 42.857 0.00 0.00 0.00 2.83
349 362 6.469275 GCGGATTTTGTTTACTAATTGAGCTC 59.531 38.462 6.82 6.82 0.00 4.09
407 426 8.474710 TGAGGTATCTCTAGTATTTTGGTACC 57.525 38.462 4.43 4.43 40.58 3.34
454 474 2.112815 GGCTGTTGGGCGTATGGTC 61.113 63.158 0.00 0.00 0.00 4.02
677 697 1.666189 GTTTATCGGAGGCTGCTTGAC 59.334 52.381 4.02 0.00 0.00 3.18
844 866 9.919348 CGAGAACTACTAAAGTACTGTATTCTC 57.081 37.037 17.27 17.27 37.50 2.87
871 893 6.466885 TCCACTACACTAGCCTTTAGATTC 57.533 41.667 0.00 0.00 0.00 2.52
1087 1109 3.994392 TGAAATACTGGAAGACTCGCAAC 59.006 43.478 0.00 0.00 37.43 4.17
1214 1243 6.987386 TCGTTTTGATCTTTTCTCTCTCTCT 58.013 36.000 0.00 0.00 0.00 3.10
1215 1244 7.087639 TCGTTTTGATCTTTTCTCTCTCTCTC 58.912 38.462 0.00 0.00 0.00 3.20
1216 1245 7.040062 TCGTTTTGATCTTTTCTCTCTCTCTCT 60.040 37.037 0.00 0.00 0.00 3.10
1217 1246 7.273381 CGTTTTGATCTTTTCTCTCTCTCTCTC 59.727 40.741 0.00 0.00 0.00 3.20
1218 1247 8.306761 GTTTTGATCTTTTCTCTCTCTCTCTCT 58.693 37.037 0.00 0.00 0.00 3.10
1219 1248 7.630242 TTGATCTTTTCTCTCTCTCTCTCTC 57.370 40.000 0.00 0.00 0.00 3.20
1220 1249 6.962182 TGATCTTTTCTCTCTCTCTCTCTCT 58.038 40.000 0.00 0.00 0.00 3.10
1221 1250 7.050377 TGATCTTTTCTCTCTCTCTCTCTCTC 58.950 42.308 0.00 0.00 0.00 3.20
1222 1251 6.627087 TCTTTTCTCTCTCTCTCTCTCTCT 57.373 41.667 0.00 0.00 0.00 3.10
1223 1252 6.644347 TCTTTTCTCTCTCTCTCTCTCTCTC 58.356 44.000 0.00 0.00 0.00 3.20
1224 1253 6.441924 TCTTTTCTCTCTCTCTCTCTCTCTCT 59.558 42.308 0.00 0.00 0.00 3.10
1225 1254 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
1226 1255 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1227 1256 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1228 1257 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1229 1258 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1230 1259 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1231 1260 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1232 1261 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1233 1262 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1234 1263 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1235 1264 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1236 1265 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1237 1266 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1238 1267 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1239 1268 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1240 1269 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1241 1270 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1242 1271 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1243 1272 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1244 1273 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1245 1274 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1246 1275 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1247 1276 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1248 1277 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1249 1278 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1250 1279 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1251 1280 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1252 1281 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1253 1282 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1289 1318 3.788227 TTCTGCTTGGAATACACCTGT 57.212 42.857 0.00 0.00 0.00 4.00
1295 1324 4.528987 TGCTTGGAATACACCTGTACTGTA 59.471 41.667 0.00 0.00 32.72 2.74
1372 1521 8.701908 ATAATCCTCAGGAACGTGTTATACTA 57.298 34.615 0.00 0.00 34.34 1.82
1373 1522 5.824904 TCCTCAGGAACGTGTTATACTAC 57.175 43.478 0.00 0.00 0.00 2.73
1374 1523 5.503927 TCCTCAGGAACGTGTTATACTACT 58.496 41.667 0.00 0.00 0.00 2.57
1438 1587 0.591170 AAATTGCCGGTGACTGAACG 59.409 50.000 1.90 0.00 0.00 3.95
1441 1590 3.103911 GCCGGTGACTGAACGTCG 61.104 66.667 1.90 0.00 45.87 5.12
1460 1609 4.142578 CGTCGGTCTGGATATCTGGATTAG 60.143 50.000 2.05 0.00 0.00 1.73
1531 1692 9.616156 TTGTTCCTTGTTGTACTTTTATACTGA 57.384 29.630 0.00 0.00 0.00 3.41
1790 1959 8.877808 TCATTGCTCTATAATTAGGATATGCG 57.122 34.615 0.00 0.00 0.00 4.73
1930 2099 8.654230 TGCTGAAGTGTTGCAATTTAATTTAA 57.346 26.923 0.59 0.00 33.48 1.52
2161 2333 8.324306 TCTGGTCTCTGATAAGAAAATCACATT 58.676 33.333 0.00 0.00 32.51 2.71
2213 2385 7.482169 TTCCTCTATTTCTCAGAAGCAACTA 57.518 36.000 0.00 0.00 0.00 2.24
2239 2411 9.583765 ACGTACTTAGGTTCATATCTTCTTTTC 57.416 33.333 0.00 0.00 0.00 2.29
2262 2434 8.488651 TTCGATAATGCGTAGACTCATATCTA 57.511 34.615 0.00 0.00 0.00 1.98
2453 2641 6.131264 TCATGTTAATAAGTACTCCCTCCGA 58.869 40.000 0.00 0.00 0.00 4.55
2474 2662 8.391075 TCCGATTCTAAATATAAGCCCTTTTG 57.609 34.615 0.00 0.00 0.00 2.44
2491 2679 5.163652 CCCTTTTGGAGATTTCAATACGGAC 60.164 44.000 0.00 0.00 44.07 4.79
2492 2680 5.648092 CCTTTTGGAGATTTCAATACGGACT 59.352 40.000 0.00 0.00 44.07 3.85
2493 2681 6.821665 CCTTTTGGAGATTTCAATACGGACTA 59.178 38.462 0.00 0.00 44.07 2.59
2494 2682 7.201617 CCTTTTGGAGATTTCAATACGGACTAC 60.202 40.741 0.00 0.00 44.07 2.73
2495 2683 5.925506 TGGAGATTTCAATACGGACTACA 57.074 39.130 0.00 0.00 0.00 2.74
2496 2684 6.479972 TGGAGATTTCAATACGGACTACAT 57.520 37.500 0.00 0.00 0.00 2.29
2497 2685 7.591421 TGGAGATTTCAATACGGACTACATA 57.409 36.000 0.00 0.00 0.00 2.29
2498 2686 7.431249 TGGAGATTTCAATACGGACTACATAC 58.569 38.462 0.00 0.00 0.00 2.39
2499 2687 6.581542 GGAGATTTCAATACGGACTACATACG 59.418 42.308 0.00 0.00 0.00 3.06
2500 2688 6.444633 AGATTTCAATACGGACTACATACGG 58.555 40.000 0.00 0.00 0.00 4.02
2501 2689 5.833406 TTTCAATACGGACTACATACGGA 57.167 39.130 0.00 0.00 0.00 4.69
2504 2692 3.844577 ATACGGACTACATACGGATGC 57.155 47.619 7.78 0.00 36.43 3.91
2514 2702 7.201830 GGACTACATACGGATGCATATAGACAT 60.202 40.741 7.78 0.00 36.43 3.06
2579 2767 4.379499 CCACGTTGGAATCTCTAAAAAGGC 60.379 45.833 0.00 0.00 40.96 4.35
2601 2789 4.642429 CTTATATTTGGGAACGGAGGGAG 58.358 47.826 0.00 0.00 0.00 4.30
2602 2790 0.544697 TATTTGGGAACGGAGGGAGC 59.455 55.000 0.00 0.00 0.00 4.70
2656 2844 6.844696 ACTACATACACTTGTCACAAGTTG 57.155 37.500 21.04 18.23 0.00 3.16
2680 2868 8.703604 TGAATACTAAATACTGTTGAGCTGAC 57.296 34.615 0.00 0.00 0.00 3.51
2725 2913 6.130298 TGCTTATGTTACATTGGGAAATCG 57.870 37.500 2.23 0.00 0.00 3.34
2750 2938 1.068194 TGTGGCGGGCTAAATTTTTCG 60.068 47.619 2.38 0.00 0.00 3.46
2838 3026 6.942005 TGATGAAACCATAACAGTTCAGTGAT 59.058 34.615 0.00 0.00 0.00 3.06
2998 3192 9.468532 GATTCCATCTTTGCTTTATTTATCCAC 57.531 33.333 0.00 0.00 0.00 4.02
3031 3225 4.808414 AGAAGCACTGCTACTTATGTCA 57.192 40.909 3.33 0.00 38.25 3.58
3111 3306 8.496534 TCCAATATCAGTTCCTTCATCATCTA 57.503 34.615 0.00 0.00 0.00 1.98
3169 3364 5.882557 ACAGTGATGTTCAGTTGAAAGAAGT 59.117 36.000 0.00 0.00 35.58 3.01
3170 3365 6.183360 ACAGTGATGTTCAGTTGAAAGAAGTG 60.183 38.462 0.00 0.30 35.58 3.16
3171 3366 6.037500 CAGTGATGTTCAGTTGAAAGAAGTGA 59.962 38.462 0.00 0.00 35.58 3.41
3222 3417 5.009010 GCTTGACTTTCAACTCTTCCAATGA 59.991 40.000 0.00 0.00 32.21 2.57
3235 3430 6.071728 ACTCTTCCAATGATTTAAGTTGCTGG 60.072 38.462 0.00 0.00 0.00 4.85
3239 3434 4.628333 CCAATGATTTAAGTTGCTGGCTTG 59.372 41.667 0.00 0.00 0.00 4.01
3281 3476 6.072199 AGGTTTCATATCTTCAGCCTTTCT 57.928 37.500 0.00 0.00 0.00 2.52
3345 3540 1.407979 AGCTGCTTGCCTTTATCATGC 59.592 47.619 0.00 0.00 44.23 4.06
3430 3625 1.203994 GCAGCAATGGATGAAAGCACT 59.796 47.619 0.00 0.00 30.05 4.40
3763 3958 4.792068 TGAAACCACCAGATTCAGAAACT 58.208 39.130 0.00 0.00 0.00 2.66
3935 4157 1.838112 TTTGGATGGTAAGCAGGCAG 58.162 50.000 0.00 0.00 0.00 4.85
4002 4224 9.371136 CTTCTAGTAATTGTGACTTAAGCATGA 57.629 33.333 1.29 0.00 0.00 3.07
4033 4255 3.582647 TGTCTGCTCAGGGATTTGTAAGA 59.417 43.478 0.00 0.00 0.00 2.10
4034 4256 3.935828 GTCTGCTCAGGGATTTGTAAGAC 59.064 47.826 0.00 0.00 0.00 3.01
4076 4298 7.631717 AGGAAGCAAAGTTCATAAATCTACC 57.368 36.000 0.00 0.00 0.00 3.18
4100 4322 5.099042 ACTACATCGGCTGGAATTAAACT 57.901 39.130 0.00 0.00 0.00 2.66
4163 4385 5.372363 TGGGGATTTGATTATGCTCTCCTAA 59.628 40.000 0.00 0.00 0.00 2.69
4217 4439 5.776716 AGCCCCATCAATATGTTGGATAAAG 59.223 40.000 8.65 0.00 39.08 1.85
4266 4488 6.716173 TGAAATCTTTGATCATCCAGTTCACA 59.284 34.615 0.00 0.00 0.00 3.58
4302 4524 9.883142 TTTCTTTTTCTTTGTGGTGTCATAAAT 57.117 25.926 0.00 0.00 34.35 1.40
4386 4608 7.041848 TCAGTTGTGATGTCAACATTCTTACTG 60.042 37.037 15.62 15.62 46.78 2.74
4392 4614 5.940192 TGTCAACATTCTTACTGCGATTT 57.060 34.783 0.00 0.00 0.00 2.17
4400 4622 9.774742 AACATTCTTACTGCGATTTCTATTTTC 57.225 29.630 0.00 0.00 0.00 2.29
4790 5018 7.312899 CACAGGTAACATTCCTTCCAAAATAC 58.687 38.462 0.00 0.00 41.41 1.89
4791 5019 7.176690 CACAGGTAACATTCCTTCCAAAATACT 59.823 37.037 0.00 0.00 41.41 2.12
4792 5020 7.176690 ACAGGTAACATTCCTTCCAAAATACTG 59.823 37.037 0.00 0.00 41.41 2.74
4795 5023 8.027189 GGTAACATTCCTTCCAAAATACTGTTC 58.973 37.037 0.00 0.00 0.00 3.18
4796 5024 6.590234 ACATTCCTTCCAAAATACTGTTCC 57.410 37.500 0.00 0.00 0.00 3.62
4797 5025 5.480422 ACATTCCTTCCAAAATACTGTTCCC 59.520 40.000 0.00 0.00 0.00 3.97
4798 5026 5.333566 TTCCTTCCAAAATACTGTTCCCT 57.666 39.130 0.00 0.00 0.00 4.20
4799 5027 4.918588 TCCTTCCAAAATACTGTTCCCTC 58.081 43.478 0.00 0.00 0.00 4.30
4802 5030 2.640826 TCCAAAATACTGTTCCCTCCGT 59.359 45.455 0.00 0.00 0.00 4.69
4804 5032 3.007635 CAAAATACTGTTCCCTCCGTCC 58.992 50.000 0.00 0.00 0.00 4.79
4805 5033 1.201424 AATACTGTTCCCTCCGTCCC 58.799 55.000 0.00 0.00 0.00 4.46
4806 5034 0.042131 ATACTGTTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
4807 5035 0.178926 TACTGTTCCCTCCGTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
4809 5037 0.109723 CTGTTCCCTCCGTCCCAAAA 59.890 55.000 0.00 0.00 0.00 2.44
4810 5038 0.774908 TGTTCCCTCCGTCCCAAAAT 59.225 50.000 0.00 0.00 0.00 1.82
4812 5040 1.816835 GTTCCCTCCGTCCCAAAATTC 59.183 52.381 0.00 0.00 0.00 2.17
4814 5042 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4815 5043 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4816 5044 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4817 5045 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4818 5046 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4819 5047 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4820 5048 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4821 5049 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4822 5050 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4823 5051 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4824 5052 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4825 5053 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4826 5054 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4827 5055 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4828 5056 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4829 5057 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4859 5087 7.044798 ACAGATGTATCTAGTTTCTCCTTTGC 58.955 38.462 0.00 0.00 34.85 3.68
5102 5341 1.549203 CCTGCAGGTATTTGGTTGCT 58.451 50.000 25.53 0.00 37.45 3.91
5104 5343 2.094545 CCTGCAGGTATTTGGTTGCTTC 60.095 50.000 25.53 0.00 37.45 3.86
5120 5361 5.636543 GGTTGCTTCCTTTGAATCAAATCAG 59.363 40.000 9.02 6.71 38.08 2.90
5160 5401 2.032620 CGCTCTCTTCCTAAGGGCTTA 58.967 52.381 0.00 0.00 0.00 3.09
5302 5548 1.891150 GAACTGGTCGAGTTACTCCCA 59.109 52.381 6.80 8.31 45.48 4.37
5352 5598 4.113354 GACGTAAGGCCACTAATCTCAAG 58.887 47.826 5.01 0.00 42.36 3.02
5362 5608 5.106515 GCCACTAATCTCAAGGACTTTTCAC 60.107 44.000 0.00 0.00 0.00 3.18
5368 5614 0.310854 CAAGGACTTTTCACGGCACC 59.689 55.000 0.00 0.00 0.00 5.01
5369 5615 0.106918 AAGGACTTTTCACGGCACCA 60.107 50.000 0.00 0.00 0.00 4.17
5400 5647 7.968956 GCAGGATTAGATTTAGATGCATCATTG 59.031 37.037 27.81 7.82 32.79 2.82
5403 5650 8.173775 GGATTAGATTTAGATGCATCATTGTCG 58.826 37.037 27.81 0.00 0.00 4.35
5424 5677 4.079850 ACTGAGCCTGAGCCTGCG 62.080 66.667 0.00 0.00 41.25 5.18
5426 5679 3.306595 CTGAGCCTGAGCCTGCGAA 62.307 63.158 0.00 0.00 41.25 4.70
5427 5680 2.817396 GAGCCTGAGCCTGCGAAC 60.817 66.667 0.00 0.00 41.25 3.95
5428 5681 3.308014 GAGCCTGAGCCTGCGAACT 62.308 63.158 0.00 0.00 41.25 3.01
5614 5966 3.326006 TGATCTGAGTCCAGTTTTGCTCT 59.674 43.478 0.00 0.00 41.16 4.09
5615 5967 3.117491 TCTGAGTCCAGTTTTGCTCTG 57.883 47.619 0.00 0.00 41.16 3.35
5620 5972 0.401738 TCCAGTTTTGCTCTGAGGGG 59.598 55.000 6.83 0.00 35.20 4.79
5633 5985 3.695747 GAGGGGCCTCTCAAGCAGC 62.696 68.421 28.63 0.00 39.80 5.25
5634 5986 4.039092 GGGGCCTCTCAAGCAGCA 62.039 66.667 0.84 0.00 0.00 4.41
5635 5987 2.438075 GGGCCTCTCAAGCAGCAG 60.438 66.667 0.84 0.00 0.00 4.24
5636 5988 2.350514 GGCCTCTCAAGCAGCAGT 59.649 61.111 0.00 0.00 0.00 4.40
5713 6065 6.723298 ATCTCTATCCTGGTTGTAGAACAG 57.277 41.667 5.00 0.90 33.27 3.16
5725 6077 6.762187 TGGTTGTAGAACAGTCGTAAATTTCA 59.238 34.615 5.00 0.00 33.27 2.69
5755 6107 1.448893 GGAATAGCGCCCAACACGA 60.449 57.895 2.29 0.00 0.00 4.35
5765 6117 0.667184 CCCAACACGAATGCTTTGGC 60.667 55.000 0.00 0.00 39.26 4.52
5769 6121 0.515564 ACACGAATGCTTTGGCGTAC 59.484 50.000 0.00 0.00 42.25 3.67
5794 6146 0.796312 CGTGATGCGCCTAAAAGTGT 59.204 50.000 4.18 0.00 0.00 3.55
5849 6201 9.820229 TTTCTTTAATTAACTGATAAGCGTGTG 57.180 29.630 0.00 0.00 0.00 3.82
5850 6202 7.461107 TCTTTAATTAACTGATAAGCGTGTGC 58.539 34.615 0.00 0.00 43.24 4.57
5860 6212 2.248431 GCGTGTGCGTGAGGAAAC 59.752 61.111 0.00 0.00 40.81 2.78
5861 6213 2.935955 CGTGTGCGTGAGGAAACC 59.064 61.111 0.00 0.00 36.11 3.27
5862 6214 1.885388 CGTGTGCGTGAGGAAACCA 60.885 57.895 0.00 0.00 36.11 3.67
5863 6215 1.831389 CGTGTGCGTGAGGAAACCAG 61.831 60.000 0.00 0.00 36.11 4.00
5864 6216 0.531974 GTGTGCGTGAGGAAACCAGA 60.532 55.000 0.00 0.00 32.89 3.86
5865 6217 0.531974 TGTGCGTGAGGAAACCAGAC 60.532 55.000 0.00 0.00 0.00 3.51
5866 6218 0.249911 GTGCGTGAGGAAACCAGACT 60.250 55.000 0.00 0.00 0.00 3.24
5867 6219 0.033504 TGCGTGAGGAAACCAGACTC 59.966 55.000 0.00 0.00 0.00 3.36
5868 6220 0.670854 GCGTGAGGAAACCAGACTCC 60.671 60.000 0.00 0.00 0.00 3.85
5871 6223 2.224305 CGTGAGGAAACCAGACTCCTTT 60.224 50.000 0.00 0.00 42.34 3.11
5872 6224 3.744530 CGTGAGGAAACCAGACTCCTTTT 60.745 47.826 0.00 0.00 42.34 2.27
5873 6225 4.207955 GTGAGGAAACCAGACTCCTTTTT 58.792 43.478 0.00 0.00 42.34 1.94
5934 6360 0.249911 AGCGTTCTCTTCACCACCAC 60.250 55.000 0.00 0.00 0.00 4.16
5936 6362 0.944311 CGTTCTCTTCACCACCACCG 60.944 60.000 0.00 0.00 0.00 4.94
5946 6372 0.110486 ACCACCACCGAAATGCTTCT 59.890 50.000 0.00 0.00 0.00 2.85
5962 6388 0.112218 TTCTTAGCAAAGGGGCAGCA 59.888 50.000 0.00 0.00 35.83 4.41
6003 6429 1.864711 CTCTTGGCGACGAAAACTCAA 59.135 47.619 0.00 0.00 0.00 3.02
6040 6466 1.599171 CGTCTCAGCGAGCTAAGATGG 60.599 57.143 9.14 0.00 0.00 3.51
6044 6470 3.058450 CTCAGCGAGCTAAGATGGAATG 58.942 50.000 7.02 0.00 0.00 2.67
6045 6471 2.695147 TCAGCGAGCTAAGATGGAATGA 59.305 45.455 7.02 0.00 0.00 2.57
6047 6473 1.789464 GCGAGCTAAGATGGAATGACG 59.211 52.381 0.00 0.00 0.00 4.35
6048 6474 1.789464 CGAGCTAAGATGGAATGACGC 59.211 52.381 0.00 0.00 0.00 5.19
6050 6476 3.056304 GAGCTAAGATGGAATGACGCTC 58.944 50.000 0.00 0.00 36.32 5.03
6051 6477 2.432146 AGCTAAGATGGAATGACGCTCA 59.568 45.455 0.00 0.00 0.00 4.26
6052 6478 3.070734 AGCTAAGATGGAATGACGCTCAT 59.929 43.478 0.00 0.00 39.09 2.90
6053 6479 4.281941 AGCTAAGATGGAATGACGCTCATA 59.718 41.667 0.00 0.00 35.76 2.15
6054 6480 4.991056 GCTAAGATGGAATGACGCTCATAA 59.009 41.667 1.73 0.00 35.76 1.90
6055 6481 5.107298 GCTAAGATGGAATGACGCTCATAAC 60.107 44.000 1.73 0.18 35.76 1.89
6056 6482 4.679373 AGATGGAATGACGCTCATAACT 57.321 40.909 1.73 0.00 35.76 2.24
6057 6483 4.375272 AGATGGAATGACGCTCATAACTG 58.625 43.478 1.73 0.00 35.76 3.16
6058 6484 2.905075 TGGAATGACGCTCATAACTGG 58.095 47.619 1.73 0.00 35.76 4.00
6059 6485 1.599542 GGAATGACGCTCATAACTGGC 59.400 52.381 1.73 0.00 35.76 4.85
6066 6492 1.009829 GCTCATAACTGGCGAACTGG 58.990 55.000 0.00 0.00 0.00 4.00
6067 6493 1.405526 GCTCATAACTGGCGAACTGGA 60.406 52.381 0.00 0.00 0.00 3.86
6068 6494 2.544685 CTCATAACTGGCGAACTGGAG 58.455 52.381 0.00 0.00 0.00 3.86
6069 6495 2.166459 CTCATAACTGGCGAACTGGAGA 59.834 50.000 0.00 0.00 0.00 3.71
6070 6496 2.565391 TCATAACTGGCGAACTGGAGAA 59.435 45.455 0.00 0.00 0.00 2.87
6071 6497 2.450609 TAACTGGCGAACTGGAGAAC 57.549 50.000 0.00 0.00 0.00 3.01
6072 6498 0.600255 AACTGGCGAACTGGAGAACG 60.600 55.000 0.00 0.00 0.00 3.95
6073 6499 1.289066 CTGGCGAACTGGAGAACGA 59.711 57.895 0.00 0.00 0.00 3.85
6074 6500 0.319555 CTGGCGAACTGGAGAACGAA 60.320 55.000 0.00 0.00 0.00 3.85
6075 6501 0.599204 TGGCGAACTGGAGAACGAAC 60.599 55.000 0.00 0.00 0.00 3.95
6076 6502 1.615107 GGCGAACTGGAGAACGAACG 61.615 60.000 0.00 0.00 0.00 3.95
6077 6503 0.662374 GCGAACTGGAGAACGAACGA 60.662 55.000 0.14 0.00 0.00 3.85
6078 6504 1.978542 CGAACTGGAGAACGAACGAT 58.021 50.000 0.14 0.00 0.00 3.73
6079 6505 1.912110 CGAACTGGAGAACGAACGATC 59.088 52.381 0.14 0.00 0.00 3.69
6080 6506 2.667448 CGAACTGGAGAACGAACGATCA 60.667 50.000 0.14 0.00 0.00 2.92
6081 6507 3.512680 GAACTGGAGAACGAACGATCAT 58.487 45.455 0.14 0.00 0.00 2.45
6082 6508 3.152261 ACTGGAGAACGAACGATCATC 57.848 47.619 0.14 0.00 0.00 2.92
6083 6509 2.492088 ACTGGAGAACGAACGATCATCA 59.508 45.455 0.14 1.30 0.00 3.07
6084 6510 3.111838 CTGGAGAACGAACGATCATCAG 58.888 50.000 0.14 6.89 0.00 2.90
6085 6511 2.159240 TGGAGAACGAACGATCATCAGG 60.159 50.000 0.14 0.00 0.00 3.86
6086 6512 2.464865 GAGAACGAACGATCATCAGGG 58.535 52.381 0.14 0.00 0.00 4.45
6087 6513 2.099263 GAGAACGAACGATCATCAGGGA 59.901 50.000 0.14 0.00 0.00 4.20
6088 6514 2.099921 AGAACGAACGATCATCAGGGAG 59.900 50.000 0.14 0.00 0.00 4.30
6089 6515 0.747255 ACGAACGATCATCAGGGAGG 59.253 55.000 0.14 0.00 0.00 4.30
6090 6516 0.032678 CGAACGATCATCAGGGAGGG 59.967 60.000 0.00 0.00 0.00 4.30
6091 6517 1.123928 GAACGATCATCAGGGAGGGT 58.876 55.000 0.00 0.00 0.00 4.34
6092 6518 0.833287 AACGATCATCAGGGAGGGTG 59.167 55.000 0.00 0.00 0.00 4.61
6093 6519 1.050988 ACGATCATCAGGGAGGGTGG 61.051 60.000 0.00 0.00 0.00 4.61
6094 6520 0.760567 CGATCATCAGGGAGGGTGGA 60.761 60.000 0.00 0.00 0.00 4.02
6095 6521 1.511613 GATCATCAGGGAGGGTGGAA 58.488 55.000 0.00 0.00 0.00 3.53
6096 6522 1.141858 GATCATCAGGGAGGGTGGAAC 59.858 57.143 0.00 0.00 0.00 3.62
6097 6523 0.178876 TCATCAGGGAGGGTGGAACA 60.179 55.000 0.00 0.00 39.98 3.18
6134 6560 7.954666 TTATGGAATTTTTAGTTCTCAGGGG 57.045 36.000 0.00 0.00 0.00 4.79
6135 6561 4.672899 TGGAATTTTTAGTTCTCAGGGGG 58.327 43.478 0.00 0.00 0.00 5.40
6136 6562 4.107311 TGGAATTTTTAGTTCTCAGGGGGT 59.893 41.667 0.00 0.00 0.00 4.95
6137 6563 4.462834 GGAATTTTTAGTTCTCAGGGGGTG 59.537 45.833 0.00 0.00 0.00 4.61
6138 6564 3.518992 TTTTTAGTTCTCAGGGGGTGG 57.481 47.619 0.00 0.00 0.00 4.61
6139 6565 0.696501 TTTAGTTCTCAGGGGGTGGC 59.303 55.000 0.00 0.00 0.00 5.01
6140 6566 0.474854 TTAGTTCTCAGGGGGTGGCA 60.475 55.000 0.00 0.00 0.00 4.92
6141 6567 0.253160 TAGTTCTCAGGGGGTGGCAT 60.253 55.000 0.00 0.00 0.00 4.40
6142 6568 1.142688 AGTTCTCAGGGGGTGGCATT 61.143 55.000 0.00 0.00 0.00 3.56
6143 6569 0.251787 GTTCTCAGGGGGTGGCATTT 60.252 55.000 0.00 0.00 0.00 2.32
6144 6570 0.486879 TTCTCAGGGGGTGGCATTTT 59.513 50.000 0.00 0.00 0.00 1.82
6145 6571 0.039618 TCTCAGGGGGTGGCATTTTC 59.960 55.000 0.00 0.00 0.00 2.29
6146 6572 0.040204 CTCAGGGGGTGGCATTTTCT 59.960 55.000 0.00 0.00 0.00 2.52
6147 6573 0.486879 TCAGGGGGTGGCATTTTCTT 59.513 50.000 0.00 0.00 0.00 2.52
6148 6574 0.897621 CAGGGGGTGGCATTTTCTTC 59.102 55.000 0.00 0.00 0.00 2.87
6149 6575 0.486879 AGGGGGTGGCATTTTCTTCA 59.513 50.000 0.00 0.00 0.00 3.02
6150 6576 1.079323 AGGGGGTGGCATTTTCTTCAT 59.921 47.619 0.00 0.00 0.00 2.57
6151 6577 2.314549 AGGGGGTGGCATTTTCTTCATA 59.685 45.455 0.00 0.00 0.00 2.15
6152 6578 2.695147 GGGGGTGGCATTTTCTTCATAG 59.305 50.000 0.00 0.00 0.00 2.23
6153 6579 2.101415 GGGGTGGCATTTTCTTCATAGC 59.899 50.000 0.00 0.00 0.00 2.97
6154 6580 2.223572 GGGTGGCATTTTCTTCATAGCG 60.224 50.000 0.00 0.00 0.00 4.26
6155 6581 2.682856 GGTGGCATTTTCTTCATAGCGA 59.317 45.455 0.00 0.00 0.00 4.93
6156 6582 3.487544 GGTGGCATTTTCTTCATAGCGAC 60.488 47.826 0.00 0.00 0.00 5.19
6157 6583 3.126858 GTGGCATTTTCTTCATAGCGACA 59.873 43.478 0.00 0.00 32.20 4.35
6158 6584 3.947196 TGGCATTTTCTTCATAGCGACAT 59.053 39.130 0.00 0.00 0.00 3.06
6159 6585 4.201940 TGGCATTTTCTTCATAGCGACATG 60.202 41.667 0.00 0.00 0.00 3.21
6160 6586 4.285292 GCATTTTCTTCATAGCGACATGG 58.715 43.478 0.00 0.00 0.00 3.66
6161 6587 4.285292 CATTTTCTTCATAGCGACATGGC 58.715 43.478 0.00 0.00 0.00 4.40
6162 6588 2.689553 TTCTTCATAGCGACATGGCA 57.310 45.000 0.00 0.00 34.64 4.92
6163 6589 2.229675 TCTTCATAGCGACATGGCAG 57.770 50.000 0.00 0.00 34.64 4.85
6164 6590 1.482182 TCTTCATAGCGACATGGCAGT 59.518 47.619 0.00 0.00 34.64 4.40
6165 6591 2.093500 TCTTCATAGCGACATGGCAGTT 60.093 45.455 0.00 0.00 34.64 3.16
6166 6592 2.401583 TCATAGCGACATGGCAGTTT 57.598 45.000 0.00 0.00 34.64 2.66
6167 6593 2.279741 TCATAGCGACATGGCAGTTTC 58.720 47.619 0.00 0.00 34.64 2.78
6168 6594 2.093500 TCATAGCGACATGGCAGTTTCT 60.093 45.455 0.00 0.00 34.64 2.52
6169 6595 2.472695 TAGCGACATGGCAGTTTCTT 57.527 45.000 0.00 0.00 34.64 2.52
6170 6596 1.160137 AGCGACATGGCAGTTTCTTC 58.840 50.000 0.00 0.00 34.64 2.87
6171 6597 0.874390 GCGACATGGCAGTTTCTTCA 59.126 50.000 0.00 0.00 0.00 3.02
6172 6598 1.135859 GCGACATGGCAGTTTCTTCAG 60.136 52.381 0.00 0.00 0.00 3.02
6173 6599 2.416747 CGACATGGCAGTTTCTTCAGA 58.583 47.619 0.00 0.00 0.00 3.27
6174 6600 2.414481 CGACATGGCAGTTTCTTCAGAG 59.586 50.000 0.00 0.00 0.00 3.35
6175 6601 3.668447 GACATGGCAGTTTCTTCAGAGA 58.332 45.455 0.00 0.00 0.00 3.10
6176 6602 4.067896 GACATGGCAGTTTCTTCAGAGAA 58.932 43.478 0.00 0.00 40.07 2.87
6177 6603 4.070716 ACATGGCAGTTTCTTCAGAGAAG 58.929 43.478 0.00 0.39 42.55 2.85
6178 6604 4.202398 ACATGGCAGTTTCTTCAGAGAAGA 60.202 41.667 5.41 5.41 42.55 2.87
6179 6605 3.733337 TGGCAGTTTCTTCAGAGAAGAC 58.267 45.455 8.84 0.52 42.55 3.01
6180 6606 3.134623 TGGCAGTTTCTTCAGAGAAGACA 59.865 43.478 8.84 0.50 42.55 3.41
6181 6607 4.130118 GGCAGTTTCTTCAGAGAAGACAA 58.870 43.478 8.84 5.07 42.55 3.18
6182 6608 4.759183 GGCAGTTTCTTCAGAGAAGACAAT 59.241 41.667 8.84 0.00 42.55 2.71
6183 6609 5.240403 GGCAGTTTCTTCAGAGAAGACAATT 59.760 40.000 8.84 2.69 42.55 2.32
6184 6610 6.238869 GGCAGTTTCTTCAGAGAAGACAATTT 60.239 38.462 8.84 0.12 42.55 1.82
6185 6611 7.199078 GCAGTTTCTTCAGAGAAGACAATTTT 58.801 34.615 8.84 0.00 42.55 1.82
6186 6612 7.378194 GCAGTTTCTTCAGAGAAGACAATTTTC 59.622 37.037 8.84 0.00 42.55 2.29
6187 6613 8.400947 CAGTTTCTTCAGAGAAGACAATTTTCA 58.599 33.333 8.84 0.00 42.55 2.69
6188 6614 9.129532 AGTTTCTTCAGAGAAGACAATTTTCAT 57.870 29.630 8.84 0.00 42.55 2.57
6189 6615 9.741647 GTTTCTTCAGAGAAGACAATTTTCATT 57.258 29.630 8.84 0.00 42.55 2.57
6200 6626 9.650371 GAAGACAATTTTCATTTAAAAACTGCC 57.350 29.630 0.00 0.00 40.37 4.85
6201 6627 7.850501 AGACAATTTTCATTTAAAAACTGCCG 58.149 30.769 0.00 0.00 40.37 5.69
6202 6628 7.494298 AGACAATTTTCATTTAAAAACTGCCGT 59.506 29.630 0.00 0.00 40.37 5.68
6203 6629 7.626446 ACAATTTTCATTTAAAAACTGCCGTC 58.374 30.769 0.00 0.00 40.37 4.79
6204 6630 5.874892 TTTTCATTTAAAAACTGCCGTCG 57.125 34.783 0.00 0.00 34.11 5.12
6205 6631 4.555348 TTCATTTAAAAACTGCCGTCGT 57.445 36.364 0.00 0.00 0.00 4.34
6206 6632 4.555348 TCATTTAAAAACTGCCGTCGTT 57.445 36.364 0.00 0.00 0.00 3.85
6207 6633 4.922719 TCATTTAAAAACTGCCGTCGTTT 58.077 34.783 0.00 0.00 36.22 3.60
6208 6634 4.735822 TCATTTAAAAACTGCCGTCGTTTG 59.264 37.500 0.00 0.00 35.00 2.93
6209 6635 4.352600 TTTAAAAACTGCCGTCGTTTGA 57.647 36.364 0.00 0.00 35.00 2.69
6210 6636 4.555348 TTAAAAACTGCCGTCGTTTGAT 57.445 36.364 0.00 0.00 35.00 2.57
6211 6637 3.430333 AAAAACTGCCGTCGTTTGATT 57.570 38.095 0.00 0.00 35.00 2.57
6212 6638 3.430333 AAAACTGCCGTCGTTTGATTT 57.570 38.095 0.00 0.00 35.00 2.17
6213 6639 4.555348 AAAACTGCCGTCGTTTGATTTA 57.445 36.364 0.00 0.00 35.00 1.40
6214 6640 4.759516 AAACTGCCGTCGTTTGATTTAT 57.240 36.364 0.00 0.00 33.64 1.40
6215 6641 4.759516 AACTGCCGTCGTTTGATTTATT 57.240 36.364 0.00 0.00 0.00 1.40
6216 6642 4.759516 ACTGCCGTCGTTTGATTTATTT 57.240 36.364 0.00 0.00 0.00 1.40
6217 6643 5.116069 ACTGCCGTCGTTTGATTTATTTT 57.884 34.783 0.00 0.00 0.00 1.82
6218 6644 5.151389 ACTGCCGTCGTTTGATTTATTTTC 58.849 37.500 0.00 0.00 0.00 2.29
6219 6645 5.109662 TGCCGTCGTTTGATTTATTTTCA 57.890 34.783 0.00 0.00 0.00 2.69
6220 6646 4.912766 TGCCGTCGTTTGATTTATTTTCAC 59.087 37.500 0.00 0.00 0.00 3.18
6221 6647 4.912766 GCCGTCGTTTGATTTATTTTCACA 59.087 37.500 0.00 0.00 0.00 3.58
6222 6648 5.399892 GCCGTCGTTTGATTTATTTTCACAA 59.600 36.000 0.00 0.00 0.00 3.33
6223 6649 6.398517 GCCGTCGTTTGATTTATTTTCACAAG 60.399 38.462 0.00 0.00 0.00 3.16
6224 6650 6.635239 CCGTCGTTTGATTTATTTTCACAAGT 59.365 34.615 0.00 0.00 0.00 3.16
6225 6651 7.799447 CCGTCGTTTGATTTATTTTCACAAGTA 59.201 33.333 0.00 0.00 0.00 2.24
6226 6652 8.827599 CGTCGTTTGATTTATTTTCACAAGTAG 58.172 33.333 0.00 0.00 0.00 2.57
6227 6653 9.872757 GTCGTTTGATTTATTTTCACAAGTAGA 57.127 29.630 0.00 0.00 0.00 2.59
6233 6659 9.638239 TGATTTATTTTCACAAGTAGAATTGCC 57.362 29.630 0.00 0.00 33.28 4.52
6234 6660 9.638239 GATTTATTTTCACAAGTAGAATTGCCA 57.362 29.630 0.00 0.00 33.28 4.92
6236 6662 9.638239 TTTATTTTCACAAGTAGAATTGCCATC 57.362 29.630 0.00 0.00 33.28 3.51
6237 6663 6.647334 TTTTCACAAGTAGAATTGCCATCA 57.353 33.333 0.00 0.00 33.28 3.07
6238 6664 6.647334 TTTCACAAGTAGAATTGCCATCAA 57.353 33.333 0.00 0.00 36.51 2.57
6239 6665 6.647334 TTCACAAGTAGAATTGCCATCAAA 57.353 33.333 0.00 0.00 35.56 2.69
6240 6666 6.839124 TCACAAGTAGAATTGCCATCAAAT 57.161 33.333 0.00 0.00 35.56 2.32
6241 6667 6.623486 TCACAAGTAGAATTGCCATCAAATG 58.377 36.000 0.00 0.00 35.56 2.32
6242 6668 6.209192 TCACAAGTAGAATTGCCATCAAATGT 59.791 34.615 0.00 0.00 35.56 2.71
6243 6669 6.309494 CACAAGTAGAATTGCCATCAAATGTG 59.691 38.462 0.00 0.00 35.56 3.21
6244 6670 6.209192 ACAAGTAGAATTGCCATCAAATGTGA 59.791 34.615 0.00 0.00 35.56 3.58
6245 6671 7.093640 ACAAGTAGAATTGCCATCAAATGTGAT 60.094 33.333 0.00 0.00 38.10 3.06
6246 6672 7.414222 AGTAGAATTGCCATCAAATGTGATT 57.586 32.000 0.00 0.00 42.03 2.57
6247 6673 7.844009 AGTAGAATTGCCATCAAATGTGATTT 58.156 30.769 0.00 0.00 42.03 2.17
6249 6675 5.353123 AGAATTGCCATCAAATGTGATTTGC 59.647 36.000 9.35 9.35 46.96 3.68
6250 6676 3.965379 TGCCATCAAATGTGATTTGCT 57.035 38.095 15.04 0.00 46.96 3.91
6251 6677 3.852286 TGCCATCAAATGTGATTTGCTC 58.148 40.909 15.04 0.00 46.96 4.26
6252 6678 3.192466 GCCATCAAATGTGATTTGCTCC 58.808 45.455 9.10 0.00 46.96 4.70
6253 6679 3.441163 CCATCAAATGTGATTTGCTCCG 58.559 45.455 0.00 0.00 46.96 4.63
6254 6680 3.129113 CCATCAAATGTGATTTGCTCCGA 59.871 43.478 0.00 0.00 46.96 4.55
6255 6681 4.380761 CCATCAAATGTGATTTGCTCCGAA 60.381 41.667 0.00 0.00 46.96 4.30
6256 6682 4.424061 TCAAATGTGATTTGCTCCGAAG 57.576 40.909 4.47 0.00 46.96 3.79
6257 6683 4.071423 TCAAATGTGATTTGCTCCGAAGA 58.929 39.130 4.47 0.00 46.96 2.87
6258 6684 4.701651 TCAAATGTGATTTGCTCCGAAGAT 59.298 37.500 4.47 0.00 46.96 2.40
6259 6685 4.627611 AATGTGATTTGCTCCGAAGATG 57.372 40.909 0.00 0.00 0.00 2.90
6260 6686 3.333029 TGTGATTTGCTCCGAAGATGA 57.667 42.857 0.00 0.00 0.00 2.92
6261 6687 3.673902 TGTGATTTGCTCCGAAGATGAA 58.326 40.909 0.00 0.00 0.00 2.57
6262 6688 4.071423 TGTGATTTGCTCCGAAGATGAAA 58.929 39.130 0.00 0.00 0.00 2.69
6263 6689 4.701651 TGTGATTTGCTCCGAAGATGAAAT 59.298 37.500 0.00 0.00 0.00 2.17
6264 6690 5.183713 TGTGATTTGCTCCGAAGATGAAATT 59.816 36.000 0.00 0.00 0.00 1.82
6265 6691 5.514204 GTGATTTGCTCCGAAGATGAAATTG 59.486 40.000 0.00 0.00 0.00 2.32
6266 6692 3.492421 TTGCTCCGAAGATGAAATTGC 57.508 42.857 0.00 0.00 0.00 3.56
6267 6693 1.745087 TGCTCCGAAGATGAAATTGCC 59.255 47.619 0.00 0.00 0.00 4.52
6268 6694 1.268234 GCTCCGAAGATGAAATTGCCG 60.268 52.381 0.00 0.00 0.00 5.69
6269 6695 2.009774 CTCCGAAGATGAAATTGCCGT 58.990 47.619 0.00 0.00 0.00 5.68
6270 6696 2.420022 CTCCGAAGATGAAATTGCCGTT 59.580 45.455 0.00 0.00 0.00 4.44
6271 6697 2.817258 TCCGAAGATGAAATTGCCGTTT 59.183 40.909 0.00 0.00 0.00 3.60
6272 6698 3.119990 TCCGAAGATGAAATTGCCGTTTC 60.120 43.478 4.46 4.46 38.32 2.78
6273 6699 2.840176 CGAAGATGAAATTGCCGTTTCG 59.160 45.455 6.47 0.69 40.20 3.46
6281 6707 2.153547 ATTGCCGTTTCGCCCCAAAG 62.154 55.000 0.00 0.00 0.00 2.77
6313 6739 1.753930 ATGATCATCTGCGTTTGCCA 58.246 45.000 1.18 0.00 41.78 4.92
6325 6751 2.097153 GCGTTTGCCATGTTTAAAACCG 60.097 45.455 0.00 0.00 33.98 4.44
6327 6753 3.459145 GTTTGCCATGTTTAAAACCGGT 58.541 40.909 0.00 0.00 0.00 5.28
6328 6754 2.802787 TGCCATGTTTAAAACCGGTG 57.197 45.000 8.52 0.00 0.00 4.94
6329 6755 2.307768 TGCCATGTTTAAAACCGGTGA 58.692 42.857 8.52 0.00 0.00 4.02
6340 6766 0.762418 AACCGGTGACCACTGATTCA 59.238 50.000 8.52 0.00 40.06 2.57
6346 6772 3.335579 GGTGACCACTGATTCAACTACC 58.664 50.000 0.00 0.00 0.00 3.18
6371 6797 1.066605 GGCAATTATCACCTGCAGCAG 59.933 52.381 16.23 16.23 37.83 4.24
6378 6804 0.533531 TCACCTGCAGCAGAAGTGTG 60.534 55.000 24.90 21.13 32.44 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 110 2.498726 GCGCAAGAGAGAGAGGGG 59.501 66.667 0.30 0.00 43.02 4.79
104 112 2.555565 AAGCGCGCAAGAGAGAGAGG 62.556 60.000 35.10 0.00 40.82 3.69
155 163 4.803426 CCGCTGGTGCTCCGTCTC 62.803 72.222 0.00 0.00 36.97 3.36
157 165 4.803426 CTCCGCTGGTGCTCCGTC 62.803 72.222 0.00 0.00 36.97 4.79
160 168 4.154347 CTCCTCCGCTGGTGCTCC 62.154 72.222 0.00 0.00 36.97 4.70
161 169 4.154347 CCTCCTCCGCTGGTGCTC 62.154 72.222 0.00 0.00 36.97 4.26
275 283 3.978687 AGAGCGAACGAATACTATTGGG 58.021 45.455 0.00 0.00 0.00 4.12
288 296 6.307915 GGAAAATAAAAGTCAGAGAGCGAAC 58.692 40.000 0.00 0.00 0.00 3.95
293 301 6.423905 TCACACGGAAAATAAAAGTCAGAGAG 59.576 38.462 0.00 0.00 0.00 3.20
334 347 6.173339 CAACCCAGAGAGCTCAATTAGTAAA 58.827 40.000 17.77 0.00 0.00 2.01
349 362 3.017581 CCCCTCCCCAACCCAGAG 61.018 72.222 0.00 0.00 0.00 3.35
368 381 0.478507 ACCTCAAGTTTGACCCCAGG 59.521 55.000 0.00 0.00 32.90 4.45
407 426 6.595716 AGCAAGCTGAACCAAACTAATACTAG 59.404 38.462 0.00 0.00 0.00 2.57
454 474 2.159338 CGGGCCAGAATTCACAAATCAG 60.159 50.000 4.39 0.00 0.00 2.90
677 697 6.032094 GTCATATGGCAAGTGAATTCAACAG 58.968 40.000 10.35 3.89 0.00 3.16
797 819 5.175859 TCGAGAAATTAAGAGCGTCCATTT 58.824 37.500 0.00 0.00 0.00 2.32
798 820 4.755411 TCGAGAAATTAAGAGCGTCCATT 58.245 39.130 0.00 0.00 0.00 3.16
799 821 4.098044 TCTCGAGAAATTAAGAGCGTCCAT 59.902 41.667 14.01 0.00 0.00 3.41
844 866 6.698380 TCTAAAGGCTAGTGTAGTGGAAAAG 58.302 40.000 0.00 0.00 0.00 2.27
882 904 9.722056 CAATACATTAGTGGAGAAAAGTATTGC 57.278 33.333 0.00 0.00 39.96 3.56
1087 1109 2.353889 CGTGGAATGCAATCTCTTGAGG 59.646 50.000 1.01 0.00 34.04 3.86
1173 1195 7.439381 TCAAAACGAGTCTAACCAAGTAGATT 58.561 34.615 0.00 0.00 32.81 2.40
1214 1243 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1215 1244 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1216 1245 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1217 1246 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1218 1247 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1219 1248 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1220 1249 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1221 1250 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1222 1251 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1223 1252 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1224 1253 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1225 1254 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1226 1255 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1227 1256 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1228 1257 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1229 1258 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1230 1259 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1231 1260 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
1232 1261 4.646945 GTGAGAGAGAGAGAGAGAGAGAGA 59.353 50.000 0.00 0.00 0.00 3.10
1233 1262 4.648762 AGTGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
1234 1263 4.403752 CAGTGAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
1235 1264 4.403752 TCAGTGAGAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
1236 1265 4.352893 TCAGTGAGAGAGAGAGAGAGAGA 58.647 47.826 0.00 0.00 0.00 3.10
1237 1266 4.743057 TCAGTGAGAGAGAGAGAGAGAG 57.257 50.000 0.00 0.00 0.00 3.20
1238 1267 5.698741 ATTCAGTGAGAGAGAGAGAGAGA 57.301 43.478 0.00 0.00 0.00 3.10
1239 1268 6.037940 CAGAATTCAGTGAGAGAGAGAGAGAG 59.962 46.154 8.44 0.00 0.00 3.20
1240 1269 5.882000 CAGAATTCAGTGAGAGAGAGAGAGA 59.118 44.000 8.44 0.00 0.00 3.10
1241 1270 5.066893 CCAGAATTCAGTGAGAGAGAGAGAG 59.933 48.000 8.44 0.00 0.00 3.20
1242 1271 4.949238 CCAGAATTCAGTGAGAGAGAGAGA 59.051 45.833 8.44 0.00 0.00 3.10
1243 1272 4.949238 TCCAGAATTCAGTGAGAGAGAGAG 59.051 45.833 8.44 0.00 0.00 3.20
1244 1273 4.928263 TCCAGAATTCAGTGAGAGAGAGA 58.072 43.478 8.44 0.00 0.00 3.10
1245 1274 5.857471 ATCCAGAATTCAGTGAGAGAGAG 57.143 43.478 8.44 0.00 0.00 3.20
1246 1275 6.617782 AAATCCAGAATTCAGTGAGAGAGA 57.382 37.500 8.44 0.00 0.00 3.10
1247 1276 7.064847 CAGAAAATCCAGAATTCAGTGAGAGAG 59.935 40.741 8.44 0.00 0.00 3.20
1248 1277 6.877855 CAGAAAATCCAGAATTCAGTGAGAGA 59.122 38.462 8.44 0.00 0.00 3.10
1249 1278 6.403418 GCAGAAAATCCAGAATTCAGTGAGAG 60.403 42.308 8.44 0.00 0.00 3.20
1250 1279 5.413833 GCAGAAAATCCAGAATTCAGTGAGA 59.586 40.000 8.44 0.00 0.00 3.27
1251 1280 5.415077 AGCAGAAAATCCAGAATTCAGTGAG 59.585 40.000 8.44 0.00 0.00 3.51
1252 1281 5.319453 AGCAGAAAATCCAGAATTCAGTGA 58.681 37.500 8.44 1.17 0.00 3.41
1253 1282 5.640189 AGCAGAAAATCCAGAATTCAGTG 57.360 39.130 8.44 0.00 0.00 3.66
1289 1318 6.038382 GTCACTACTCTAATGCAGCTACAGTA 59.962 42.308 0.00 0.00 0.00 2.74
1438 1587 4.767928 ACTAATCCAGATATCCAGACCGAC 59.232 45.833 0.00 0.00 0.00 4.79
1441 1590 7.540474 TTACACTAATCCAGATATCCAGACC 57.460 40.000 0.00 0.00 0.00 3.85
1498 1647 9.634163 AAAAGTACAACAAGGAACAAAAACTAG 57.366 29.630 0.00 0.00 0.00 2.57
1531 1692 8.256356 AGAGGTTAATGCTAGATACACTCATT 57.744 34.615 0.00 0.00 31.24 2.57
1897 2066 2.759191 CAACACTTCAGCAGTAGAGCA 58.241 47.619 0.00 0.00 36.85 4.26
1930 2099 5.009010 CAGTAGAGTGGACTGCAAACAAATT 59.991 40.000 0.00 0.00 38.06 1.82
1968 2138 3.281727 TCAGCCATTCCAATGTCTACC 57.718 47.619 0.00 0.00 34.60 3.18
1970 2140 4.019411 TGACTTCAGCCATTCCAATGTCTA 60.019 41.667 0.00 0.00 34.60 2.59
2132 2304 9.171877 GTGATTTTCTTATCAGAGACCAGAAAT 57.828 33.333 0.00 0.00 35.32 2.17
2213 2385 9.583765 GAAAAGAAGATATGAACCTAAGTACGT 57.416 33.333 0.00 0.00 0.00 3.57
2239 2411 6.848800 GCTAGATATGAGTCTACGCATTATCG 59.151 42.308 4.66 0.00 37.54 2.92
2262 2434 5.539955 ACTTTTTCAATAGGACCACAATGCT 59.460 36.000 0.00 0.00 0.00 3.79
2474 2662 6.581542 CGTATGTAGTCCGTATTGAAATCTCC 59.418 42.308 0.00 0.00 0.00 3.71
2493 2681 9.890629 AAAATATGTCTATATGCATCCGTATGT 57.109 29.630 0.19 0.00 35.38 2.29
2497 2685 9.809096 CTCTAAAATATGTCTATATGCATCCGT 57.191 33.333 0.19 0.00 30.00 4.69
2498 2686 9.809096 ACTCTAAAATATGTCTATATGCATCCG 57.191 33.333 0.19 0.00 30.00 4.18
2579 2767 4.642429 CTCCCTCCGTTCCCAAATATAAG 58.358 47.826 0.00 0.00 0.00 1.73
2588 2776 0.765510 ATATTGCTCCCTCCGTTCCC 59.234 55.000 0.00 0.00 0.00 3.97
2656 2844 8.703604 TGTCAGCTCAACAGTATTTAGTATTC 57.296 34.615 0.00 0.00 0.00 1.75
2701 2889 6.375736 TCGATTTCCCAATGTAACATAAGCAA 59.624 34.615 0.00 0.00 0.00 3.91
2725 2913 1.680338 ATTTAGCCCGCCACATTCTC 58.320 50.000 0.00 0.00 0.00 2.87
2750 2938 5.783111 ACTTCCAAACATGTAATTGGCTTC 58.217 37.500 20.23 0.00 44.63 3.86
2795 2983 7.523293 TTCATCACTTCAACCAATGTTACAT 57.477 32.000 0.00 0.00 32.09 2.29
2838 3026 2.635427 GGTTTGTTATTTCCAGCCCCAA 59.365 45.455 0.00 0.00 0.00 4.12
2998 3192 3.196463 CAGTGCTTCTAGGCTGATGAAG 58.804 50.000 16.85 16.85 39.88 3.02
3031 3225 8.757982 ATCCATACTGCAGAATTCATAACTTT 57.242 30.769 23.35 0.00 0.00 2.66
3080 3275 7.265599 TGAAGGAACTGATATTGGAACCTAA 57.734 36.000 0.00 0.00 40.86 2.69
3101 3296 3.200605 TGGCTTCAAGGCTAGATGATGAA 59.799 43.478 12.92 1.71 41.96 2.57
3111 3306 1.635487 TGTTAGGATGGCTTCAAGGCT 59.365 47.619 12.92 0.00 41.96 4.58
3169 3364 5.420725 ACCTGTAGCATTGTAGTTCATCA 57.579 39.130 0.00 0.00 0.00 3.07
3170 3365 9.712305 ATATTACCTGTAGCATTGTAGTTCATC 57.288 33.333 0.00 0.00 0.00 2.92
3171 3366 9.494271 CATATTACCTGTAGCATTGTAGTTCAT 57.506 33.333 0.00 0.00 0.00 2.57
3222 3417 2.629617 ACAGCAAGCCAGCAACTTAAAT 59.370 40.909 0.55 0.00 36.85 1.40
3261 3456 7.624549 ACACTAGAAAGGCTGAAGATATGAAA 58.375 34.615 0.00 0.00 0.00 2.69
3302 3497 7.743104 GCTAAATGCGTATATACTTGAGCAAT 58.257 34.615 14.51 6.33 38.15 3.56
3421 3616 3.470709 CTGAAGGAACTCAGTGCTTTCA 58.529 45.455 9.92 9.92 38.49 2.69
3430 3625 4.630644 AAGAATCAGCTGAAGGAACTCA 57.369 40.909 22.50 0.00 38.49 3.41
4128 4350 9.312904 CATAATCAAATCCCCACAGGTTATTAT 57.687 33.333 0.00 0.00 36.75 1.28
4129 4351 7.232534 GCATAATCAAATCCCCACAGGTTATTA 59.767 37.037 0.00 0.00 36.75 0.98
4130 4352 6.041979 GCATAATCAAATCCCCACAGGTTATT 59.958 38.462 0.00 0.00 36.75 1.40
4131 4353 5.539955 GCATAATCAAATCCCCACAGGTTAT 59.460 40.000 0.00 0.00 36.75 1.89
4132 4354 4.892934 GCATAATCAAATCCCCACAGGTTA 59.107 41.667 0.00 0.00 36.75 2.85
4133 4355 3.706086 GCATAATCAAATCCCCACAGGTT 59.294 43.478 0.00 0.00 36.75 3.50
4134 4356 3.052642 AGCATAATCAAATCCCCACAGGT 60.053 43.478 0.00 0.00 36.75 4.00
4135 4357 3.569491 AGCATAATCAAATCCCCACAGG 58.431 45.455 0.00 0.00 0.00 4.00
4136 4358 4.467769 AGAGCATAATCAAATCCCCACAG 58.532 43.478 0.00 0.00 0.00 3.66
4137 4359 4.464008 GAGAGCATAATCAAATCCCCACA 58.536 43.478 0.00 0.00 0.00 4.17
4138 4360 3.823304 GGAGAGCATAATCAAATCCCCAC 59.177 47.826 0.00 0.00 0.00 4.61
4217 4439 5.728637 AGGAAACAGAAATTTGGATCCAC 57.271 39.130 15.91 1.97 32.47 4.02
4266 4488 7.334171 CCACAAAGAAAAAGAAAACCATTCACT 59.666 33.333 0.00 0.00 0.00 3.41
4336 4558 8.035984 TGAATTTTGCAATGCTGAAGATAATGA 58.964 29.630 6.82 0.00 0.00 2.57
4433 4656 5.139727 TCCAATGTTGAATGGACAAGAGTT 58.860 37.500 0.00 0.00 40.74 3.01
4790 5018 0.109723 TTTTGGGACGGAGGGAACAG 59.890 55.000 0.00 0.00 0.00 3.16
4791 5019 0.774908 ATTTTGGGACGGAGGGAACA 59.225 50.000 0.00 0.00 0.00 3.18
4792 5020 1.816835 GAATTTTGGGACGGAGGGAAC 59.183 52.381 0.00 0.00 0.00 3.62
4795 5023 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4796 5024 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4797 5025 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4798 5026 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4799 5027 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4802 5030 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4833 5061 8.198109 GCAAAGGAGAAACTAGATACATCTGTA 58.802 37.037 0.00 0.00 37.76 2.74
4834 5062 7.044798 GCAAAGGAGAAACTAGATACATCTGT 58.955 38.462 0.00 0.00 37.76 3.41
4835 5063 7.044181 TGCAAAGGAGAAACTAGATACATCTG 58.956 38.462 0.00 0.00 37.76 2.90
4836 5064 7.187824 TGCAAAGGAGAAACTAGATACATCT 57.812 36.000 0.00 0.00 40.86 2.90
4837 5065 7.849804 TTGCAAAGGAGAAACTAGATACATC 57.150 36.000 0.00 0.00 0.00 3.06
4838 5066 7.148407 CGTTTGCAAAGGAGAAACTAGATACAT 60.148 37.037 23.99 0.00 0.00 2.29
4839 5067 6.147164 CGTTTGCAAAGGAGAAACTAGATACA 59.853 38.462 23.99 0.00 0.00 2.29
4840 5068 6.147328 ACGTTTGCAAAGGAGAAACTAGATAC 59.853 38.462 32.16 7.65 0.00 2.24
4841 5069 6.228258 ACGTTTGCAAAGGAGAAACTAGATA 58.772 36.000 32.16 0.00 0.00 1.98
4842 5070 5.063880 ACGTTTGCAAAGGAGAAACTAGAT 58.936 37.500 32.16 8.37 0.00 1.98
4843 5071 4.448210 ACGTTTGCAAAGGAGAAACTAGA 58.552 39.130 32.16 0.00 0.00 2.43
4844 5072 4.813296 ACGTTTGCAAAGGAGAAACTAG 57.187 40.909 32.16 8.97 0.00 2.57
4845 5073 4.201970 CCAACGTTTGCAAAGGAGAAACTA 60.202 41.667 32.16 0.00 0.00 2.24
4846 5074 3.428862 CCAACGTTTGCAAAGGAGAAACT 60.429 43.478 32.16 11.01 0.00 2.66
4859 5087 0.601057 CCCCCTTTAGCCAACGTTTG 59.399 55.000 0.00 0.00 0.00 2.93
5100 5339 6.685657 AGTTCTGATTTGATTCAAAGGAAGC 58.314 36.000 16.34 13.08 39.83 3.86
5101 5340 9.538508 AAAAGTTCTGATTTGATTCAAAGGAAG 57.461 29.630 16.34 12.84 36.76 3.46
5120 5361 4.924462 AGCGACTCTAGCTGTTAAAAGTTC 59.076 41.667 0.00 0.00 44.22 3.01
5150 5391 4.553330 TCAGGAGTTGTTAAGCCCTTAG 57.447 45.455 0.00 0.00 0.00 2.18
5152 5393 3.117663 TGTTCAGGAGTTGTTAAGCCCTT 60.118 43.478 0.00 0.00 0.00 3.95
5160 5401 5.071788 TCCATAAGAGTGTTCAGGAGTTGTT 59.928 40.000 0.00 0.00 0.00 2.83
5290 5536 2.022195 TCGAGGAATGGGAGTAACTCG 58.978 52.381 0.00 0.00 46.41 4.18
5302 5548 2.257207 TCAACAAGGGTCTCGAGGAAT 58.743 47.619 13.56 0.00 0.00 3.01
5352 5598 0.521735 GATGGTGCCGTGAAAAGTCC 59.478 55.000 0.00 0.00 0.00 3.85
5362 5608 4.100084 TCCTGCTGGATGGTGCCG 62.100 66.667 8.48 0.00 37.46 5.69
5385 5631 3.688673 TGCACGACAATGATGCATCTAAA 59.311 39.130 26.32 7.97 44.17 1.85
5400 5647 1.735920 CTCAGGCTCAGTGCACGAC 60.736 63.158 12.01 0.00 45.15 4.34
5403 5650 2.745492 GGCTCAGGCTCAGTGCAC 60.745 66.667 9.40 9.40 45.15 4.57
5426 5679 9.684702 TCCTATACCTAATTTCCCAAGATAAGT 57.315 33.333 0.00 0.00 0.00 2.24
5600 5951 1.528129 CCCTCAGAGCAAAACTGGAC 58.472 55.000 0.00 0.00 36.22 4.02
5614 5966 2.203983 TGCTTGAGAGGCCCCTCA 60.204 61.111 13.85 13.85 44.99 3.86
5615 5967 2.588989 CTGCTTGAGAGGCCCCTC 59.411 66.667 7.46 7.46 43.03 4.30
5620 5972 1.004080 TGACTGCTGCTTGAGAGGC 60.004 57.895 0.00 0.00 0.00 4.70
5635 5987 3.490078 GGCATAGTCAGCTACTCTGTGAC 60.490 52.174 10.97 6.06 43.32 3.67
5636 5988 2.690497 GGCATAGTCAGCTACTCTGTGA 59.310 50.000 10.97 0.00 43.32 3.58
5725 6077 6.410540 TGGGCGCTATTCCAAAAATAAAATT 58.589 32.000 7.64 0.00 0.00 1.82
5755 6107 0.237235 CACACGTACGCCAAAGCATT 59.763 50.000 16.72 0.00 39.83 3.56
5777 6129 2.177394 TCACACTTTTAGGCGCATCA 57.823 45.000 10.83 0.00 0.00 3.07
5778 6130 4.570772 TCTTATCACACTTTTAGGCGCATC 59.429 41.667 10.83 0.00 0.00 3.91
5779 6131 4.332819 GTCTTATCACACTTTTAGGCGCAT 59.667 41.667 10.83 3.98 0.00 4.73
5780 6132 3.682858 GTCTTATCACACTTTTAGGCGCA 59.317 43.478 10.83 0.00 0.00 6.09
5782 6134 4.201724 GCAGTCTTATCACACTTTTAGGCG 60.202 45.833 0.00 0.00 0.00 5.52
5783 6135 4.095036 GGCAGTCTTATCACACTTTTAGGC 59.905 45.833 0.00 0.00 0.00 3.93
5784 6136 5.491982 AGGCAGTCTTATCACACTTTTAGG 58.508 41.667 0.00 0.00 0.00 2.69
5785 6137 6.091441 GTGAGGCAGTCTTATCACACTTTTAG 59.909 42.308 0.00 0.00 41.32 1.85
5786 6138 5.932303 GTGAGGCAGTCTTATCACACTTTTA 59.068 40.000 0.00 0.00 41.32 1.52
5787 6139 4.757149 GTGAGGCAGTCTTATCACACTTTT 59.243 41.667 0.00 0.00 41.32 2.27
5788 6140 4.040952 AGTGAGGCAGTCTTATCACACTTT 59.959 41.667 6.91 0.00 43.55 2.66
5794 6146 5.939764 ATAACAGTGAGGCAGTCTTATCA 57.060 39.130 0.00 0.00 0.00 2.15
5833 6185 1.989864 CACGCACACGCTTATCAGTTA 59.010 47.619 0.00 0.00 45.53 2.24
5834 6186 0.790207 CACGCACACGCTTATCAGTT 59.210 50.000 0.00 0.00 45.53 3.16
5835 6187 0.038618 TCACGCACACGCTTATCAGT 60.039 50.000 0.00 0.00 45.53 3.41
5836 6188 0.642291 CTCACGCACACGCTTATCAG 59.358 55.000 0.00 0.00 45.53 2.90
5838 6190 0.457853 TCCTCACGCACACGCTTATC 60.458 55.000 0.00 0.00 45.53 1.75
5841 6193 1.522806 TTTCCTCACGCACACGCTT 60.523 52.632 0.00 0.00 45.53 4.68
5842 6194 2.108157 TTTCCTCACGCACACGCT 59.892 55.556 0.00 0.00 45.53 5.07
5845 6197 0.531974 TCTGGTTTCCTCACGCACAC 60.532 55.000 0.00 0.00 0.00 3.82
5846 6198 0.531974 GTCTGGTTTCCTCACGCACA 60.532 55.000 0.00 0.00 0.00 4.57
5847 6199 0.249911 AGTCTGGTTTCCTCACGCAC 60.250 55.000 0.00 0.00 0.00 5.34
5848 6200 0.033504 GAGTCTGGTTTCCTCACGCA 59.966 55.000 0.00 0.00 0.00 5.24
5849 6201 0.670854 GGAGTCTGGTTTCCTCACGC 60.671 60.000 0.00 0.00 0.00 5.34
5850 6202 0.969894 AGGAGTCTGGTTTCCTCACG 59.030 55.000 0.00 0.00 39.65 4.35
5851 6203 3.493767 AAAGGAGTCTGGTTTCCTCAC 57.506 47.619 0.00 0.00 42.95 3.51
5852 6204 4.519906 AAAAAGGAGTCTGGTTTCCTCA 57.480 40.909 0.00 0.00 42.95 3.86
5880 6232 9.507329 GCATGGAGATTGGTTTTCTATCTAATA 57.493 33.333 0.00 0.00 0.00 0.98
5881 6233 7.449704 GGCATGGAGATTGGTTTTCTATCTAAT 59.550 37.037 0.00 0.00 0.00 1.73
5946 6372 1.535204 GCTTGCTGCCCCTTTGCTAA 61.535 55.000 0.00 0.00 35.15 3.09
5962 6388 5.044698 AGAGTACAGTCCCTAGTCTTAGCTT 60.045 44.000 0.00 0.00 0.00 3.74
6003 6429 4.341827 GCAATGTTGCGCAAACCT 57.658 50.000 26.87 9.57 45.11 3.50
6023 6449 2.879002 TTCCATCTTAGCTCGCTGAG 57.121 50.000 4.48 4.48 0.00 3.35
6040 6466 1.258982 CGCCAGTTATGAGCGTCATTC 59.741 52.381 5.94 2.10 38.26 2.67
6044 6470 0.645868 GTTCGCCAGTTATGAGCGTC 59.354 55.000 3.39 0.00 42.78 5.19
6045 6471 0.246635 AGTTCGCCAGTTATGAGCGT 59.753 50.000 3.39 0.00 42.78 5.07
6047 6473 1.009829 CCAGTTCGCCAGTTATGAGC 58.990 55.000 0.00 0.00 0.00 4.26
6048 6474 2.166459 TCTCCAGTTCGCCAGTTATGAG 59.834 50.000 0.00 0.00 0.00 2.90
6050 6476 2.672961 TCTCCAGTTCGCCAGTTATG 57.327 50.000 0.00 0.00 0.00 1.90
6051 6477 2.674177 CGTTCTCCAGTTCGCCAGTTAT 60.674 50.000 0.00 0.00 0.00 1.89
6052 6478 1.336517 CGTTCTCCAGTTCGCCAGTTA 60.337 52.381 0.00 0.00 0.00 2.24
6053 6479 0.600255 CGTTCTCCAGTTCGCCAGTT 60.600 55.000 0.00 0.00 0.00 3.16
6054 6480 1.006102 CGTTCTCCAGTTCGCCAGT 60.006 57.895 0.00 0.00 0.00 4.00
6055 6481 0.319555 TTCGTTCTCCAGTTCGCCAG 60.320 55.000 0.00 0.00 0.00 4.85
6056 6482 0.599204 GTTCGTTCTCCAGTTCGCCA 60.599 55.000 0.00 0.00 0.00 5.69
6057 6483 1.615107 CGTTCGTTCTCCAGTTCGCC 61.615 60.000 0.00 0.00 0.00 5.54
6058 6484 0.662374 TCGTTCGTTCTCCAGTTCGC 60.662 55.000 0.00 0.00 0.00 4.70
6059 6485 1.912110 GATCGTTCGTTCTCCAGTTCG 59.088 52.381 0.00 0.00 0.00 3.95
6060 6486 2.942710 TGATCGTTCGTTCTCCAGTTC 58.057 47.619 5.19 0.00 0.00 3.01
6061 6487 3.056821 TGATGATCGTTCGTTCTCCAGTT 60.057 43.478 0.00 0.00 0.00 3.16
6062 6488 2.492088 TGATGATCGTTCGTTCTCCAGT 59.508 45.455 0.00 0.00 0.00 4.00
6063 6489 3.111838 CTGATGATCGTTCGTTCTCCAG 58.888 50.000 0.00 7.51 0.00 3.86
6064 6490 2.159240 CCTGATGATCGTTCGTTCTCCA 60.159 50.000 0.00 2.99 0.00 3.86
6065 6491 2.464865 CCTGATGATCGTTCGTTCTCC 58.535 52.381 0.00 0.00 0.00 3.71
6066 6492 2.099263 TCCCTGATGATCGTTCGTTCTC 59.901 50.000 0.00 2.21 0.00 2.87
6067 6493 2.099921 CTCCCTGATGATCGTTCGTTCT 59.900 50.000 0.00 0.00 0.00 3.01
6068 6494 2.464865 CTCCCTGATGATCGTTCGTTC 58.535 52.381 0.00 0.00 0.00 3.95
6069 6495 1.137086 CCTCCCTGATGATCGTTCGTT 59.863 52.381 0.00 0.00 0.00 3.85
6070 6496 0.747255 CCTCCCTGATGATCGTTCGT 59.253 55.000 0.00 0.00 0.00 3.85
6071 6497 0.032678 CCCTCCCTGATGATCGTTCG 59.967 60.000 0.00 0.00 0.00 3.95
6072 6498 1.123928 ACCCTCCCTGATGATCGTTC 58.876 55.000 0.00 0.00 0.00 3.95
6073 6499 0.833287 CACCCTCCCTGATGATCGTT 59.167 55.000 0.00 0.00 0.00 3.85
6074 6500 1.050988 CCACCCTCCCTGATGATCGT 61.051 60.000 0.00 0.00 0.00 3.73
6075 6501 0.760567 TCCACCCTCCCTGATGATCG 60.761 60.000 0.00 0.00 0.00 3.69
6076 6502 1.141858 GTTCCACCCTCCCTGATGATC 59.858 57.143 0.00 0.00 0.00 2.92
6077 6503 1.216990 GTTCCACCCTCCCTGATGAT 58.783 55.000 0.00 0.00 0.00 2.45
6078 6504 0.178876 TGTTCCACCCTCCCTGATGA 60.179 55.000 0.00 0.00 0.00 2.92
6079 6505 0.035056 GTGTTCCACCCTCCCTGATG 60.035 60.000 0.00 0.00 0.00 3.07
6080 6506 1.553690 CGTGTTCCACCCTCCCTGAT 61.554 60.000 0.00 0.00 0.00 2.90
6081 6507 2.214216 CGTGTTCCACCCTCCCTGA 61.214 63.158 0.00 0.00 0.00 3.86
6082 6508 2.347490 CGTGTTCCACCCTCCCTG 59.653 66.667 0.00 0.00 0.00 4.45
6083 6509 3.637273 GCGTGTTCCACCCTCCCT 61.637 66.667 0.00 0.00 0.00 4.20
6084 6510 2.969300 TTTGCGTGTTCCACCCTCCC 62.969 60.000 0.00 0.00 0.00 4.30
6085 6511 1.527380 TTTGCGTGTTCCACCCTCC 60.527 57.895 0.00 0.00 0.00 4.30
6086 6512 1.652563 GTTTGCGTGTTCCACCCTC 59.347 57.895 0.00 0.00 0.00 4.30
6087 6513 2.184167 CGTTTGCGTGTTCCACCCT 61.184 57.895 0.00 0.00 0.00 4.34
6088 6514 2.330041 CGTTTGCGTGTTCCACCC 59.670 61.111 0.00 0.00 0.00 4.61
6108 6534 8.811994 CCCCTGAGAACTAAAAATTCCATAAAA 58.188 33.333 0.00 0.00 0.00 1.52
6109 6535 7.398904 CCCCCTGAGAACTAAAAATTCCATAAA 59.601 37.037 0.00 0.00 0.00 1.40
6110 6536 6.895204 CCCCCTGAGAACTAAAAATTCCATAA 59.105 38.462 0.00 0.00 0.00 1.90
6111 6537 6.011096 ACCCCCTGAGAACTAAAAATTCCATA 60.011 38.462 0.00 0.00 0.00 2.74
6112 6538 5.222547 ACCCCCTGAGAACTAAAAATTCCAT 60.223 40.000 0.00 0.00 0.00 3.41
6113 6539 4.107311 ACCCCCTGAGAACTAAAAATTCCA 59.893 41.667 0.00 0.00 0.00 3.53
6114 6540 4.462834 CACCCCCTGAGAACTAAAAATTCC 59.537 45.833 0.00 0.00 0.00 3.01
6115 6541 4.462834 CCACCCCCTGAGAACTAAAAATTC 59.537 45.833 0.00 0.00 0.00 2.17
6116 6542 4.416516 CCACCCCCTGAGAACTAAAAATT 58.583 43.478 0.00 0.00 0.00 1.82
6117 6543 3.817931 GCCACCCCCTGAGAACTAAAAAT 60.818 47.826 0.00 0.00 0.00 1.82
6118 6544 2.490168 GCCACCCCCTGAGAACTAAAAA 60.490 50.000 0.00 0.00 0.00 1.94
6119 6545 1.074889 GCCACCCCCTGAGAACTAAAA 59.925 52.381 0.00 0.00 0.00 1.52
6120 6546 0.696501 GCCACCCCCTGAGAACTAAA 59.303 55.000 0.00 0.00 0.00 1.85
6121 6547 0.474854 TGCCACCCCCTGAGAACTAA 60.475 55.000 0.00 0.00 0.00 2.24
6122 6548 0.253160 ATGCCACCCCCTGAGAACTA 60.253 55.000 0.00 0.00 0.00 2.24
6123 6549 1.142688 AATGCCACCCCCTGAGAACT 61.143 55.000 0.00 0.00 0.00 3.01
6124 6550 0.251787 AAATGCCACCCCCTGAGAAC 60.252 55.000 0.00 0.00 0.00 3.01
6125 6551 0.486879 AAAATGCCACCCCCTGAGAA 59.513 50.000 0.00 0.00 0.00 2.87
6126 6552 0.039618 GAAAATGCCACCCCCTGAGA 59.960 55.000 0.00 0.00 0.00 3.27
6127 6553 0.040204 AGAAAATGCCACCCCCTGAG 59.960 55.000 0.00 0.00 0.00 3.35
6128 6554 0.486879 AAGAAAATGCCACCCCCTGA 59.513 50.000 0.00 0.00 0.00 3.86
6129 6555 0.897621 GAAGAAAATGCCACCCCCTG 59.102 55.000 0.00 0.00 0.00 4.45
6130 6556 0.486879 TGAAGAAAATGCCACCCCCT 59.513 50.000 0.00 0.00 0.00 4.79
6131 6557 1.571955 ATGAAGAAAATGCCACCCCC 58.428 50.000 0.00 0.00 0.00 5.40
6132 6558 2.101415 GCTATGAAGAAAATGCCACCCC 59.899 50.000 0.00 0.00 0.00 4.95
6133 6559 2.223572 CGCTATGAAGAAAATGCCACCC 60.224 50.000 0.00 0.00 0.00 4.61
6134 6560 2.682856 TCGCTATGAAGAAAATGCCACC 59.317 45.455 0.00 0.00 0.00 4.61
6135 6561 3.126858 TGTCGCTATGAAGAAAATGCCAC 59.873 43.478 0.00 0.00 0.00 5.01
6136 6562 3.342719 TGTCGCTATGAAGAAAATGCCA 58.657 40.909 0.00 0.00 0.00 4.92
6137 6563 4.285292 CATGTCGCTATGAAGAAAATGCC 58.715 43.478 0.00 0.00 0.00 4.40
6138 6564 4.285292 CCATGTCGCTATGAAGAAAATGC 58.715 43.478 0.00 0.00 0.00 3.56
6139 6565 4.201940 TGCCATGTCGCTATGAAGAAAATG 60.202 41.667 0.00 0.00 0.00 2.32
6140 6566 3.947196 TGCCATGTCGCTATGAAGAAAAT 59.053 39.130 0.00 0.00 0.00 1.82
6141 6567 3.342719 TGCCATGTCGCTATGAAGAAAA 58.657 40.909 0.00 0.00 0.00 2.29
6142 6568 2.938451 CTGCCATGTCGCTATGAAGAAA 59.062 45.455 0.00 0.00 0.00 2.52
6143 6569 2.093500 ACTGCCATGTCGCTATGAAGAA 60.093 45.455 0.00 0.00 0.00 2.52
6144 6570 1.482182 ACTGCCATGTCGCTATGAAGA 59.518 47.619 0.00 0.00 0.00 2.87
6145 6571 1.945387 ACTGCCATGTCGCTATGAAG 58.055 50.000 0.00 1.75 0.00 3.02
6146 6572 2.401583 AACTGCCATGTCGCTATGAA 57.598 45.000 0.00 0.00 0.00 2.57
6147 6573 2.093500 AGAAACTGCCATGTCGCTATGA 60.093 45.455 0.00 0.00 0.00 2.15
6148 6574 2.283298 AGAAACTGCCATGTCGCTATG 58.717 47.619 0.00 0.00 0.00 2.23
6149 6575 2.698855 AGAAACTGCCATGTCGCTAT 57.301 45.000 0.00 0.00 0.00 2.97
6150 6576 2.289382 TGAAGAAACTGCCATGTCGCTA 60.289 45.455 0.00 0.00 0.00 4.26
6151 6577 1.160137 GAAGAAACTGCCATGTCGCT 58.840 50.000 0.00 0.00 0.00 4.93
6152 6578 0.874390 TGAAGAAACTGCCATGTCGC 59.126 50.000 0.00 0.00 0.00 5.19
6153 6579 2.414481 CTCTGAAGAAACTGCCATGTCG 59.586 50.000 0.00 0.00 0.00 4.35
6154 6580 3.668447 TCTCTGAAGAAACTGCCATGTC 58.332 45.455 0.00 0.00 0.00 3.06
6155 6581 3.777106 TCTCTGAAGAAACTGCCATGT 57.223 42.857 0.00 0.00 0.00 3.21
6156 6582 4.153835 GTCTTCTCTGAAGAAACTGCCATG 59.846 45.833 11.03 0.00 40.95 3.66
6157 6583 4.202398 TGTCTTCTCTGAAGAAACTGCCAT 60.202 41.667 11.03 0.00 40.95 4.40
6158 6584 3.134623 TGTCTTCTCTGAAGAAACTGCCA 59.865 43.478 11.03 2.67 40.95 4.92
6159 6585 3.733337 TGTCTTCTCTGAAGAAACTGCC 58.267 45.455 11.03 0.36 40.95 4.85
6160 6586 5.938438 ATTGTCTTCTCTGAAGAAACTGC 57.062 39.130 11.03 0.97 40.95 4.40
6161 6587 8.400947 TGAAAATTGTCTTCTCTGAAGAAACTG 58.599 33.333 11.03 0.00 40.95 3.16
6162 6588 8.511604 TGAAAATTGTCTTCTCTGAAGAAACT 57.488 30.769 11.03 0.00 40.95 2.66
6163 6589 9.741647 AATGAAAATTGTCTTCTCTGAAGAAAC 57.258 29.630 11.03 2.71 40.95 2.78
6174 6600 9.650371 GGCAGTTTTTAAATGAAAATTGTCTTC 57.350 29.630 0.00 0.00 37.65 2.87
6175 6601 8.334632 CGGCAGTTTTTAAATGAAAATTGTCTT 58.665 29.630 8.21 0.00 38.15 3.01
6176 6602 7.494298 ACGGCAGTTTTTAAATGAAAATTGTCT 59.506 29.630 8.21 0.00 38.15 3.41
6177 6603 7.626446 ACGGCAGTTTTTAAATGAAAATTGTC 58.374 30.769 7.41 4.80 38.05 3.18
6178 6604 7.515998 CGACGGCAGTTTTTAAATGAAAATTGT 60.516 33.333 0.00 0.00 38.05 2.71
6179 6605 6.785164 CGACGGCAGTTTTTAAATGAAAATTG 59.215 34.615 0.00 2.79 38.49 2.32
6180 6606 6.477360 ACGACGGCAGTTTTTAAATGAAAATT 59.523 30.769 0.00 0.00 36.89 1.82
6181 6607 5.980715 ACGACGGCAGTTTTTAAATGAAAAT 59.019 32.000 0.00 0.00 36.89 1.82
6182 6608 5.341617 ACGACGGCAGTTTTTAAATGAAAA 58.658 33.333 0.00 0.00 35.16 2.29
6183 6609 4.922719 ACGACGGCAGTTTTTAAATGAAA 58.077 34.783 0.00 0.00 0.00 2.69
6184 6610 4.555348 ACGACGGCAGTTTTTAAATGAA 57.445 36.364 0.00 0.00 0.00 2.57
6185 6611 4.555348 AACGACGGCAGTTTTTAAATGA 57.445 36.364 0.00 0.00 0.00 2.57
6186 6612 4.735822 TCAAACGACGGCAGTTTTTAAATG 59.264 37.500 8.23 0.00 39.50 2.32
6187 6613 4.922719 TCAAACGACGGCAGTTTTTAAAT 58.077 34.783 8.23 0.00 39.50 1.40
6188 6614 4.352600 TCAAACGACGGCAGTTTTTAAA 57.647 36.364 8.23 0.00 39.50 1.52
6189 6615 4.555348 ATCAAACGACGGCAGTTTTTAA 57.445 36.364 8.23 0.00 39.50 1.52
6190 6616 4.555348 AATCAAACGACGGCAGTTTTTA 57.445 36.364 8.23 1.99 39.50 1.52
6191 6617 3.430333 AATCAAACGACGGCAGTTTTT 57.570 38.095 8.23 0.59 39.50 1.94
6192 6618 3.430333 AAATCAAACGACGGCAGTTTT 57.570 38.095 8.23 0.00 39.50 2.43
6193 6619 4.759516 ATAAATCAAACGACGGCAGTTT 57.240 36.364 5.56 5.56 41.90 2.66
6194 6620 4.759516 AATAAATCAAACGACGGCAGTT 57.240 36.364 0.00 0.00 0.00 3.16
6195 6621 4.759516 AAATAAATCAAACGACGGCAGT 57.240 36.364 0.00 0.00 0.00 4.40
6196 6622 5.059221 GTGAAAATAAATCAAACGACGGCAG 59.941 40.000 0.00 0.00 0.00 4.85
6197 6623 4.912766 GTGAAAATAAATCAAACGACGGCA 59.087 37.500 0.00 0.00 0.00 5.69
6198 6624 4.912766 TGTGAAAATAAATCAAACGACGGC 59.087 37.500 0.00 0.00 0.00 5.68
6199 6625 6.635239 ACTTGTGAAAATAAATCAAACGACGG 59.365 34.615 0.00 0.00 0.00 4.79
6200 6626 7.603297 ACTTGTGAAAATAAATCAAACGACG 57.397 32.000 0.00 0.00 0.00 5.12
6201 6627 9.872757 TCTACTTGTGAAAATAAATCAAACGAC 57.127 29.630 0.00 0.00 0.00 4.34
6207 6633 9.638239 GGCAATTCTACTTGTGAAAATAAATCA 57.362 29.630 0.00 0.00 0.00 2.57
6208 6634 9.638239 TGGCAATTCTACTTGTGAAAATAAATC 57.362 29.630 0.00 0.00 0.00 2.17
6210 6636 9.638239 GATGGCAATTCTACTTGTGAAAATAAA 57.362 29.630 0.00 0.00 0.00 1.40
6211 6637 8.801299 TGATGGCAATTCTACTTGTGAAAATAA 58.199 29.630 0.00 0.00 0.00 1.40
6212 6638 8.347004 TGATGGCAATTCTACTTGTGAAAATA 57.653 30.769 0.00 0.00 0.00 1.40
6213 6639 7.230849 TGATGGCAATTCTACTTGTGAAAAT 57.769 32.000 0.00 0.00 0.00 1.82
6214 6640 6.647334 TGATGGCAATTCTACTTGTGAAAA 57.353 33.333 0.00 0.00 0.00 2.29
6215 6641 6.647334 TTGATGGCAATTCTACTTGTGAAA 57.353 33.333 0.00 0.00 0.00 2.69
6216 6642 6.647334 TTTGATGGCAATTCTACTTGTGAA 57.353 33.333 0.00 0.00 33.25 3.18
6217 6643 6.209192 ACATTTGATGGCAATTCTACTTGTGA 59.791 34.615 0.00 0.00 33.25 3.58
6218 6644 6.309494 CACATTTGATGGCAATTCTACTTGTG 59.691 38.462 0.00 0.00 33.25 3.33
6219 6645 6.209192 TCACATTTGATGGCAATTCTACTTGT 59.791 34.615 0.00 0.00 33.25 3.16
6220 6646 6.623486 TCACATTTGATGGCAATTCTACTTG 58.377 36.000 0.00 0.00 33.25 3.16
6221 6647 6.839124 TCACATTTGATGGCAATTCTACTT 57.161 33.333 0.00 0.00 33.25 2.24
6222 6648 7.414222 AATCACATTTGATGGCAATTCTACT 57.586 32.000 0.00 0.00 42.00 2.57
6237 6663 4.701651 TCATCTTCGGAGCAAATCACATTT 59.298 37.500 0.00 0.00 0.00 2.32
6238 6664 4.264253 TCATCTTCGGAGCAAATCACATT 58.736 39.130 0.00 0.00 0.00 2.71
6239 6665 3.877559 TCATCTTCGGAGCAAATCACAT 58.122 40.909 0.00 0.00 0.00 3.21
6240 6666 3.333029 TCATCTTCGGAGCAAATCACA 57.667 42.857 0.00 0.00 0.00 3.58
6241 6667 4.685169 TTTCATCTTCGGAGCAAATCAC 57.315 40.909 0.00 0.00 0.00 3.06
6242 6668 5.643664 CAATTTCATCTTCGGAGCAAATCA 58.356 37.500 0.00 0.00 0.00 2.57
6243 6669 4.501921 GCAATTTCATCTTCGGAGCAAATC 59.498 41.667 0.00 0.00 0.00 2.17
6244 6670 4.427312 GCAATTTCATCTTCGGAGCAAAT 58.573 39.130 0.00 0.00 0.00 2.32
6245 6671 3.367292 GGCAATTTCATCTTCGGAGCAAA 60.367 43.478 0.00 0.00 0.00 3.68
6246 6672 2.164219 GGCAATTTCATCTTCGGAGCAA 59.836 45.455 0.00 0.00 0.00 3.91
6247 6673 1.745087 GGCAATTTCATCTTCGGAGCA 59.255 47.619 0.00 0.00 0.00 4.26
6248 6674 1.268234 CGGCAATTTCATCTTCGGAGC 60.268 52.381 0.00 0.00 0.00 4.70
6249 6675 2.009774 ACGGCAATTTCATCTTCGGAG 58.990 47.619 0.00 0.00 0.00 4.63
6250 6676 2.107950 ACGGCAATTTCATCTTCGGA 57.892 45.000 0.00 0.00 0.00 4.55
6251 6677 2.919666 AACGGCAATTTCATCTTCGG 57.080 45.000 0.00 0.00 0.00 4.30
6252 6678 2.840176 CGAAACGGCAATTTCATCTTCG 59.160 45.455 11.23 0.00 38.30 3.79
6253 6679 2.594214 GCGAAACGGCAATTTCATCTTC 59.406 45.455 11.23 0.00 38.30 2.87
6254 6680 2.595386 GCGAAACGGCAATTTCATCTT 58.405 42.857 11.23 0.00 38.30 2.40
6255 6681 2.262572 GCGAAACGGCAATTTCATCT 57.737 45.000 11.23 0.00 38.30 2.90
6281 6707 3.703052 AGATGATCATTTCCTGTTTGCCC 59.297 43.478 10.14 0.00 0.00 5.36
6313 6739 3.316868 CAGTGGTCACCGGTTTTAAACAT 59.683 43.478 2.97 0.00 0.00 2.71
6325 6751 3.008049 AGGTAGTTGAATCAGTGGTCACC 59.992 47.826 0.00 0.00 0.00 4.02
6327 6753 3.007940 CCAGGTAGTTGAATCAGTGGTCA 59.992 47.826 0.00 0.00 0.00 4.02
6328 6754 3.008049 ACCAGGTAGTTGAATCAGTGGTC 59.992 47.826 0.00 0.00 31.23 4.02
6329 6755 2.979678 ACCAGGTAGTTGAATCAGTGGT 59.020 45.455 0.00 0.00 32.09 4.16
6340 6766 4.270008 GTGATAATTGCCACCAGGTAGTT 58.730 43.478 0.00 0.00 37.19 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.