Multiple sequence alignment - TraesCS3B01G253500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G253500 chr3B 100.000 7153 0 0 1 7153 406647505 406654657 0.000000e+00 13210.0
1 TraesCS3B01G253500 chr3B 80.112 895 160 16 2433 3317 401809654 401808768 0.000000e+00 651.0
2 TraesCS3B01G253500 chr3B 92.507 347 24 2 6809 7153 406664992 406665338 4.980000e-136 496.0
3 TraesCS3B01G253500 chr3B 92.023 351 25 3 6805 7153 498666766 498666417 2.320000e-134 490.0
4 TraesCS3B01G253500 chr3A 95.662 5072 160 20 659 5679 419331036 419336098 0.000000e+00 8093.0
5 TraesCS3B01G253500 chr3A 93.489 1029 40 14 5677 6699 419336179 419337186 0.000000e+00 1504.0
6 TraesCS3B01G253500 chr3A 80.112 895 160 15 2433 3317 410114259 410113373 0.000000e+00 651.0
7 TraesCS3B01G253500 chr3A 90.816 98 8 1 6704 6801 419337365 419337461 5.820000e-26 130.0
8 TraesCS3B01G253500 chr3D 96.796 4370 110 10 1338 5679 313182778 313178411 0.000000e+00 7267.0
9 TraesCS3B01G253500 chr3D 90.963 1361 62 24 1 1342 313184127 313182809 0.000000e+00 1775.0
10 TraesCS3B01G253500 chr3D 92.465 1075 42 20 5677 6728 313178330 313177272 0.000000e+00 1500.0
11 TraesCS3B01G253500 chr3D 79.473 911 152 29 2430 3317 317199140 317200038 1.320000e-171 614.0
12 TraesCS3B01G253500 chr3D 83.621 116 17 2 3644 3758 572018602 572018716 2.730000e-19 108.0
13 TraesCS3B01G253500 chr3D 86.207 58 4 4 3479 3535 153750416 153750362 7.750000e-05 60.2
14 TraesCS3B01G253500 chr4D 80.045 897 151 23 3896 4775 96908404 96907519 2.180000e-179 640.0
15 TraesCS3B01G253500 chr4D 82.955 352 54 6 6805 7152 29672806 29673155 5.390000e-81 313.0
16 TraesCS3B01G253500 chr4D 78.652 356 51 18 6805 7151 29860797 29861136 5.620000e-51 213.0
17 TraesCS3B01G253500 chr4D 78.371 356 52 18 6805 7151 29840726 29841065 2.620000e-49 207.0
18 TraesCS3B01G253500 chr4D 89.474 57 6 0 3475 3531 8600136 8600192 9.950000e-09 73.1
19 TraesCS3B01G253500 chr4A 81.091 825 132 19 3921 4731 479416382 479417196 7.830000e-179 638.0
20 TraesCS3B01G253500 chr4A 78.947 912 169 16 2418 3314 479412116 479413019 3.690000e-167 599.0
21 TraesCS3B01G253500 chr4A 86.885 61 8 0 3471 3531 560903861 560903921 1.290000e-07 69.4
22 TraesCS3B01G253500 chr4B 80.941 808 130 19 3937 4730 138302844 138302047 1.020000e-172 617.0
23 TraesCS3B01G253500 chr4B 80.984 610 107 9 2418 3022 138306160 138305555 6.490000e-130 475.0
24 TraesCS3B01G253500 chr5A 81.276 486 87 4 3902 4384 684629469 684628985 2.420000e-104 390.0
25 TraesCS3B01G253500 chr2B 82.230 287 45 5 3478 3762 260097438 260097156 7.170000e-60 243.0
26 TraesCS3B01G253500 chrUn 82.836 268 36 4 3481 3739 28299974 28299708 1.550000e-56 231.0
27 TraesCS3B01G253500 chr2D 79.940 334 45 15 6805 7131 535554654 535554972 7.220000e-55 226.0
28 TraesCS3B01G253500 chr2D 78.457 311 49 11 6805 7111 535479694 535479990 3.410000e-43 187.0
29 TraesCS3B01G253500 chr2D 78.873 284 40 13 3477 3758 249881149 249881414 2.650000e-39 174.0
30 TraesCS3B01G253500 chr5B 82.490 257 33 8 3481 3727 43132599 43132853 1.560000e-51 215.0
31 TraesCS3B01G253500 chr5B 87.766 188 15 1 3480 3659 330793159 330792972 5.620000e-51 213.0
32 TraesCS3B01G253500 chr5B 76.712 365 60 18 6797 7151 239284295 239284644 5.700000e-41 180.0
33 TraesCS3B01G253500 chr5B 82.243 214 30 5 3547 3757 43190018 43190226 2.050000e-40 178.0
34 TraesCS3B01G253500 chr2A 85.714 168 22 1 3556 3721 385916089 385915922 7.370000e-40 176.0
35 TraesCS3B01G253500 chr6D 80.769 182 29 5 3478 3655 55972308 55972129 3.480000e-28 137.0
36 TraesCS3B01G253500 chr7A 80.952 189 15 19 6972 7149 540878273 540878451 5.820000e-26 130.0
37 TraesCS3B01G253500 chr7D 79.661 177 34 2 3580 3754 75266249 75266073 7.530000e-25 126.0
38 TraesCS3B01G253500 chr1D 86.957 69 7 1 3480 3546 140049673 140049605 7.690000e-10 76.8
39 TraesCS3B01G253500 chr1A 85.075 67 9 1 5103 5168 23453649 23453583 4.630000e-07 67.6
40 TraesCS3B01G253500 chr1A 92.683 41 3 0 5102 5142 568917609 568917569 7.750000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G253500 chr3B 406647505 406654657 7152 False 13210.000000 13210 100.000000 1 7153 1 chr3B.!!$F1 7152
1 TraesCS3B01G253500 chr3B 401808768 401809654 886 True 651.000000 651 80.112000 2433 3317 1 chr3B.!!$R1 884
2 TraesCS3B01G253500 chr3A 419331036 419337461 6425 False 3242.333333 8093 93.322333 659 6801 3 chr3A.!!$F1 6142
3 TraesCS3B01G253500 chr3A 410113373 410114259 886 True 651.000000 651 80.112000 2433 3317 1 chr3A.!!$R1 884
4 TraesCS3B01G253500 chr3D 313177272 313184127 6855 True 3514.000000 7267 93.408000 1 6728 3 chr3D.!!$R2 6727
5 TraesCS3B01G253500 chr3D 317199140 317200038 898 False 614.000000 614 79.473000 2430 3317 1 chr3D.!!$F1 887
6 TraesCS3B01G253500 chr4D 96907519 96908404 885 True 640.000000 640 80.045000 3896 4775 1 chr4D.!!$R1 879
7 TraesCS3B01G253500 chr4A 479412116 479417196 5080 False 618.500000 638 80.019000 2418 4731 2 chr4A.!!$F2 2313
8 TraesCS3B01G253500 chr4B 138302047 138306160 4113 True 546.000000 617 80.962500 2418 4730 2 chr4B.!!$R1 2312

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
504 513 0.030603 GAGGAGGAGAAGGGGGACAT 60.031 60.000 0.00 0.0 0.00 3.06 F
687 696 0.250770 GAGCCCTTGACCGGAAAACT 60.251 55.000 9.46 0.0 0.00 2.66 F
880 901 1.146358 CCGATTCGCTTCCGTCTTCC 61.146 60.000 0.00 0.0 35.54 3.46 F
921 942 1.377725 CCCTTCTCAGCGGCATTGT 60.378 57.895 1.45 0.0 0.00 2.71 F
2490 2563 1.540146 GGTGTTTTGGTCAATGTGCCC 60.540 52.381 0.00 0.0 0.00 5.36 F
2986 3074 1.004511 AGCAAAAGGATCAGCTGCTCT 59.995 47.619 16.61 7.4 39.04 4.09 F
3727 4228 3.245264 ACGGGGAAGATTTGTTGGATCTT 60.245 43.478 0.00 0.0 44.32 2.40 F
4761 7656 0.535335 TATGTCACGCTGGACTTCCC 59.465 55.000 6.25 0.0 38.61 3.97 F
5706 8707 1.461127 GCGTCTTGAGTCCATGACAAC 59.539 52.381 0.00 0.0 43.61 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2088 2161 0.601558 TCGGCTGAACACTGGACTAC 59.398 55.000 0.00 0.0 0.00 2.73 R
2509 2582 1.144708 TCCACTTTCTCCAACATGGCA 59.855 47.619 0.00 0.0 37.47 4.92 R
2535 2608 1.543802 CACGAGAGCTTCTCCTTCAGT 59.456 52.381 0.00 0.0 40.34 3.41 R
2739 2827 3.451894 GCCCTTGCAACCCATCCG 61.452 66.667 0.00 0.0 37.47 4.18 R
4319 7207 2.295909 TCATTGCTTTTCCGTTCCTTGG 59.704 45.455 0.00 0.0 0.00 3.61 R
4625 7516 1.632589 AGGGTGCCATTCTGGTTTTC 58.367 50.000 0.00 0.0 40.46 2.29 R
5667 8585 2.032117 CGCACACAACTACTTCATTGCA 60.032 45.455 0.00 0.0 0.00 4.08 R
5939 8940 0.942962 CCTGAAGCTTCGCATCATCC 59.057 55.000 21.11 0.0 35.74 3.51 R
6812 10009 0.032615 AGTGGAGGAGCTAGGACTGG 60.033 60.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.874895 GGGTTAATAAGCCCGTCATATTC 57.125 43.478 9.96 0.00 43.23 1.75
64 65 0.693049 ATGCATATCCCCGGAAGTCC 59.307 55.000 0.73 0.00 0.00 3.85
67 68 1.362224 CATATCCCCGGAAGTCCCAT 58.638 55.000 0.73 0.00 34.14 4.00
122 123 6.404074 CCCAAGATAGTTGAACTGAATTGAGC 60.404 42.308 8.33 0.00 0.00 4.26
135 144 3.436704 TGAATTGAGCGTGTTGATCCTTC 59.563 43.478 0.00 0.00 29.76 3.46
137 146 2.370281 TGAGCGTGTTGATCCTTCTC 57.630 50.000 0.00 0.00 29.76 2.87
172 181 4.570663 CGGGTTCTAGGCCGCTCG 62.571 72.222 0.00 0.00 0.00 5.03
187 196 1.204704 CGCTCGCATATCCCCTATCAA 59.795 52.381 0.00 0.00 0.00 2.57
211 220 4.129380 GCATTTTGGCTGGAAGTTTTCTT 58.871 39.130 0.00 0.00 43.55 2.52
271 280 1.875009 TCAGCCGCATCATTCTCATC 58.125 50.000 0.00 0.00 0.00 2.92
285 294 8.745590 CATCATTCTCATCATCTCAGACTAGAT 58.254 37.037 0.00 0.00 36.64 1.98
291 300 5.647225 TCATCATCTCAGACTAGATCATCCG 59.353 44.000 0.00 0.00 33.87 4.18
348 357 1.153429 GACGGGTCCTCCAAATCCG 60.153 63.158 0.00 0.00 45.42 4.18
429 438 0.036306 TCAAAACCCTCTTCCGCTCC 59.964 55.000 0.00 0.00 0.00 4.70
480 489 0.395686 GTTATCCCCGAGGTTAGCCC 59.604 60.000 0.00 0.00 34.57 5.19
503 512 1.156322 AGAGGAGGAGAAGGGGGACA 61.156 60.000 0.00 0.00 0.00 4.02
504 513 0.030603 GAGGAGGAGAAGGGGGACAT 60.031 60.000 0.00 0.00 0.00 3.06
512 521 2.552231 GAAGGGGGACATGGGAACGG 62.552 65.000 0.00 0.00 0.00 4.44
534 543 1.355563 CGAGACGCCATCGAAGCTA 59.644 57.895 8.90 0.00 42.76 3.32
539 548 1.001268 GACGCCATCGAAGCTAGATGA 60.001 52.381 25.11 6.62 46.09 2.92
542 551 2.094803 CGCCATCGAAGCTAGATGAGAT 60.095 50.000 25.11 6.66 46.09 2.75
543 552 3.127721 CGCCATCGAAGCTAGATGAGATA 59.872 47.826 25.11 0.00 46.09 1.98
546 555 5.676079 GCCATCGAAGCTAGATGAGATACTC 60.676 48.000 25.11 0.00 46.09 2.59
547 556 5.414144 CCATCGAAGCTAGATGAGATACTCA 59.586 44.000 25.11 3.95 46.09 3.41
548 557 5.933187 TCGAAGCTAGATGAGATACTCAC 57.067 43.478 3.54 0.00 43.63 3.51
549 558 4.449405 TCGAAGCTAGATGAGATACTCACG 59.551 45.833 3.54 1.62 43.63 4.35
550 559 4.377943 CGAAGCTAGATGAGATACTCACGG 60.378 50.000 3.54 0.00 43.63 4.94
551 560 2.817258 AGCTAGATGAGATACTCACGGC 59.183 50.000 3.54 6.37 43.63 5.68
552 561 2.413502 GCTAGATGAGATACTCACGGCG 60.414 54.545 4.80 4.80 43.63 6.46
553 562 0.955178 AGATGAGATACTCACGGCGG 59.045 55.000 13.24 0.00 43.63 6.13
554 563 0.664767 GATGAGATACTCACGGCGGC 60.665 60.000 13.24 0.00 43.63 6.53
555 564 2.027751 GAGATACTCACGGCGGCC 59.972 66.667 13.24 9.54 0.00 6.13
556 565 2.442272 AGATACTCACGGCGGCCT 60.442 61.111 18.34 0.00 0.00 5.19
557 566 2.279517 GATACTCACGGCGGCCTG 60.280 66.667 18.34 14.03 0.00 4.85
558 567 4.530857 ATACTCACGGCGGCCTGC 62.531 66.667 18.34 10.60 45.38 4.85
687 696 0.250770 GAGCCCTTGACCGGAAAACT 60.251 55.000 9.46 0.00 0.00 2.66
753 764 1.205657 TCGAGTTTTGTGTGTCGCTC 58.794 50.000 0.00 0.00 32.41 5.03
775 787 4.083862 GCTTCCCGAGTCGGCCTT 62.084 66.667 26.60 0.00 46.86 4.35
817 838 3.386237 GCTCACTCACTCGCCCCT 61.386 66.667 0.00 0.00 0.00 4.79
823 844 1.984570 CTCACTCGCCCCTCTCCAA 60.985 63.158 0.00 0.00 0.00 3.53
830 851 2.359975 CCCCTCTCCAACCAACGC 60.360 66.667 0.00 0.00 0.00 4.84
880 901 1.146358 CCGATTCGCTTCCGTCTTCC 61.146 60.000 0.00 0.00 35.54 3.46
903 924 3.798511 CCGCCCCTTCTTCCCCTC 61.799 72.222 0.00 0.00 0.00 4.30
921 942 1.377725 CCCTTCTCAGCGGCATTGT 60.378 57.895 1.45 0.00 0.00 2.71
922 943 1.651240 CCCTTCTCAGCGGCATTGTG 61.651 60.000 1.45 0.00 0.00 3.33
1063 1090 6.672266 ACTCTTCTGTCCTTCACTGATTTA 57.328 37.500 0.00 0.00 33.30 1.40
1081 1108 5.242838 TGATTTAGTTCCACGAATTTTGGCT 59.757 36.000 0.00 0.00 33.71 4.75
1129 1156 6.746364 CGAACTAGAATATCTACGCCCAATAC 59.254 42.308 0.00 0.00 0.00 1.89
1234 1261 6.447162 TGGAGATATGACGTACTTATTGCTG 58.553 40.000 0.00 0.00 0.00 4.41
1299 1328 9.937175 GATTTTATATGCTTTCTGTCACCTTAC 57.063 33.333 0.00 0.00 0.00 2.34
1357 1421 8.955388 TGCATATTATTTTGTCTTGCTTCAGTA 58.045 29.630 0.00 0.00 0.00 2.74
1478 1550 3.804036 CTTTGGGCATGCAAATGATGAT 58.196 40.909 21.36 0.00 0.00 2.45
1541 1613 6.464222 GCTACCTCTTATATGGTTGTATGCA 58.536 40.000 0.00 0.00 37.74 3.96
1609 1682 2.092914 AGCTAGTCCAAATGGTACCAGC 60.093 50.000 21.41 14.24 33.71 4.85
1657 1730 9.881649 GCATATCTGTATATACATATGATGGGG 57.118 37.037 26.52 16.19 33.88 4.96
1744 1817 3.674528 ATGACCACTCACAGTTCAGAG 57.325 47.619 0.00 0.00 37.87 3.35
1817 1890 2.482721 AGTCGGTGCGTTTTCTTTATGG 59.517 45.455 0.00 0.00 0.00 2.74
1925 1998 7.852263 TCTAATTAAAGTAGCTCAGCTCCTTT 58.148 34.615 19.95 19.95 44.61 3.11
1974 2047 7.991460 TGATCTAGTGAATGAAATTGATCAGCT 59.009 33.333 0.00 0.00 36.46 4.24
2019 2092 5.601662 GGCTGCACTAGTTCAGATGTAATA 58.398 41.667 24.30 0.00 32.26 0.98
2020 2093 6.226787 GGCTGCACTAGTTCAGATGTAATAT 58.773 40.000 24.30 0.00 32.26 1.28
2031 2104 4.082190 TCAGATGTAATATGCTAGTCCGGC 60.082 45.833 0.00 0.00 35.01 6.13
2088 2161 3.187227 GCACCTGTTCAGATATAATGCGG 59.813 47.826 1.00 0.00 0.00 5.69
2151 2224 6.403636 CCCATTACACTAGATTTCTGTGCAAC 60.404 42.308 0.00 0.00 35.33 4.17
2174 2247 6.767456 ACATTTTCTTTGTATCCAAATGGCA 58.233 32.000 7.60 0.00 39.72 4.92
2251 2324 2.749600 CATGATTCCCAAATGGACCCA 58.250 47.619 0.00 0.00 45.11 4.51
2253 2326 4.482030 CATGATTCCCAAATGGACCCATA 58.518 43.478 1.41 0.00 45.11 2.74
2261 2334 5.549619 TCCCAAATGGACCCATAACATTTTT 59.450 36.000 1.41 0.00 41.41 1.94
2262 2335 5.647225 CCCAAATGGACCCATAACATTTTTG 59.353 40.000 1.41 2.60 41.41 2.44
2304 2377 1.734465 CGCAAGGAAAGAGCTTGTAGG 59.266 52.381 0.00 0.00 0.00 3.18
2361 2434 2.875672 GCATGCAACTGGAGTAGGTTCA 60.876 50.000 14.21 0.00 0.00 3.18
2390 2463 3.844090 GCAGGGGAGAGACGAGGC 61.844 72.222 0.00 0.00 0.00 4.70
2490 2563 1.540146 GGTGTTTTGGTCAATGTGCCC 60.540 52.381 0.00 0.00 0.00 5.36
2535 2608 2.092861 TGTTGGAGAAAGTGGAAACCGA 60.093 45.455 0.00 0.00 0.00 4.69
2661 2746 2.827322 TGCCTTCAATAATGCACTTGCT 59.173 40.909 2.33 0.00 42.66 3.91
2739 2827 2.012902 ATCGACGACCGGGGATGTTC 62.013 60.000 6.32 0.00 39.14 3.18
2986 3074 1.004511 AGCAAAAGGATCAGCTGCTCT 59.995 47.619 16.61 7.40 39.04 4.09
3457 3753 6.695278 CCCTAACATTGTATTTTGTATTGCCG 59.305 38.462 0.00 0.00 0.00 5.69
3727 4228 3.245264 ACGGGGAAGATTTGTTGGATCTT 60.245 43.478 0.00 0.00 44.32 2.40
4319 7207 5.591067 AGTCACTCTACCATACTCTGCTTAC 59.409 44.000 0.00 0.00 0.00 2.34
4470 7361 5.482526 TCTGTTGCATACTCTACAGGGTTTA 59.517 40.000 12.72 0.00 39.27 2.01
4547 7438 8.362639 ACTTGATCTTAAATCACTTGCAATTGT 58.637 29.630 15.50 1.02 0.00 2.71
4563 7454 5.568747 CAATTGTTTGCGGACGTAAATTT 57.431 34.783 10.85 0.00 32.81 1.82
4625 7516 2.288702 CGAAGTGGGAGGCTGATATCAG 60.289 54.545 25.64 25.64 46.40 2.90
4761 7656 0.535335 TATGTCACGCTGGACTTCCC 59.465 55.000 6.25 0.00 38.61 3.97
5035 7947 6.882140 TGGTGTCATACGAAAAGATTTGGTAT 59.118 34.615 5.12 5.12 0.00 2.73
5036 7948 7.392113 TGGTGTCATACGAAAAGATTTGGTATT 59.608 33.333 7.49 0.00 0.00 1.89
5093 8010 9.466497 TGGTTTAATTCTGAGAAGCAATTCTAT 57.534 29.630 0.00 0.00 0.00 1.98
5114 8031 4.497291 TTGCGAGGGACCTTATGTTAAT 57.503 40.909 0.00 0.00 0.00 1.40
5137 8054 5.114780 TGTTAGCTGCTCTTGATTGAGATC 58.885 41.667 4.91 0.00 36.23 2.75
5144 8061 6.365789 GCTGCTCTTGATTGAGATCTATACAC 59.634 42.308 0.00 0.00 36.23 2.90
5403 8320 5.822278 TCAAGTTGTTTGCGTGCTAATTAA 58.178 33.333 2.11 0.00 36.70 1.40
5408 8325 4.013728 TGTTTGCGTGCTAATTAATCCCT 58.986 39.130 0.00 0.00 0.00 4.20
5411 8328 3.211045 TGCGTGCTAATTAATCCCTTCC 58.789 45.455 0.00 0.00 0.00 3.46
5421 8338 9.764363 GCTAATTAATCCCTTCCCATTTAAAAG 57.236 33.333 0.00 0.00 0.00 2.27
5423 8340 7.747809 ATTAATCCCTTCCCATTTAAAAGCA 57.252 32.000 0.00 0.00 0.00 3.91
5428 8345 6.439487 TCCCTTCCCATTTAAAAGCATATGA 58.561 36.000 6.97 0.00 0.00 2.15
5457 8374 9.959749 TTTTGTCAATTAAGTTAGGCAAGTAAG 57.040 29.630 0.00 0.00 0.00 2.34
5481 8398 2.231721 GTGTTCTCTGACTGGGACTACC 59.768 54.545 0.00 0.00 40.81 3.18
5524 8441 1.750778 CCAATTCAGCGCTGGGTAAAT 59.249 47.619 35.36 24.15 0.00 1.40
5539 8456 8.258007 CGCTGGGTAAATTGGATATATCTTAGA 58.742 37.037 12.42 0.00 0.00 2.10
5540 8457 9.384764 GCTGGGTAAATTGGATATATCTTAGAC 57.615 37.037 12.42 4.20 0.00 2.59
5574 8491 6.348498 TGACACATAGGAAATGATACTGGTG 58.652 40.000 0.00 0.00 0.00 4.17
5667 8585 5.244626 AGTTTCTGCAGCTTTGTATTTCCAT 59.755 36.000 9.47 0.00 0.00 3.41
5706 8707 1.461127 GCGTCTTGAGTCCATGACAAC 59.539 52.381 0.00 0.00 43.61 3.32
5707 8708 2.754472 CGTCTTGAGTCCATGACAACA 58.246 47.619 0.00 0.00 43.61 3.33
5725 8726 7.637229 TGACAACATGCATAAACAATTTTTGG 58.363 30.769 0.00 0.00 34.12 3.28
5727 8728 7.994194 ACAACATGCATAAACAATTTTTGGTT 58.006 26.923 0.00 0.00 44.15 3.67
5728 8729 8.127954 ACAACATGCATAAACAATTTTTGGTTC 58.872 29.630 0.00 0.00 40.35 3.62
5729 8730 6.886307 ACATGCATAAACAATTTTTGGTTCG 58.114 32.000 0.00 0.00 40.35 3.95
5735 8736 7.059374 GCATAAACAATTTTTGGTTCGAAATGC 59.941 33.333 0.00 2.57 40.35 3.56
5780 8781 3.701542 AGCATTGGAGAGTCGTCTATGAA 59.298 43.478 11.77 0.00 30.97 2.57
5794 8795 8.291032 AGTCGTCTATGAATAACAGTATGCTAC 58.709 37.037 0.00 0.00 42.53 3.58
5908 8909 9.733556 TTGTAGTATTTGTTTATCTCACATGGT 57.266 29.630 0.00 0.00 0.00 3.55
5939 8940 4.211125 TGGTGTAGGAGCTTATCTCTGAG 58.789 47.826 0.00 0.00 41.60 3.35
5994 8995 6.016610 AGAGTATGGCGAAGAAGTCTATTCTC 60.017 42.308 0.00 0.00 0.00 2.87
6268 9272 6.419484 TGGTGAGACTTCTAGAATGTTCAA 57.581 37.500 5.44 0.00 0.00 2.69
6282 9286 0.928229 GTTCAACTGTCGCAGTCGTT 59.072 50.000 11.92 0.00 44.62 3.85
6346 9365 1.687563 CGTTTTCCAGGGTTTCAGGT 58.312 50.000 0.00 0.00 0.00 4.00
6397 9416 4.036734 TGTTGTGCAGGAGACAAAAGATTC 59.963 41.667 0.00 0.00 35.15 2.52
6404 9423 5.065914 CAGGAGACAAAAGATTCTGGAACA 58.934 41.667 0.00 0.00 0.00 3.18
6447 9466 5.466393 CACGATGATGAATTGCTACCATACA 59.534 40.000 0.00 0.00 0.00 2.29
6626 9648 6.584942 ACAACTGGAAACGTTTCTTTTCTTTC 59.415 34.615 33.23 18.36 37.35 2.62
6636 9658 7.959733 ACGTTTCTTTTCTTTCCAAAATGAAC 58.040 30.769 0.00 0.00 32.66 3.18
6670 9692 0.645355 CACACACACACACACGAGAC 59.355 55.000 0.00 0.00 0.00 3.36
6675 9698 0.524816 ACACACACACGAGACACGAC 60.525 55.000 0.00 0.00 45.77 4.34
6685 9708 1.394572 CGAGACACGACACCATACGTA 59.605 52.381 0.00 0.00 45.77 3.57
6701 9724 2.448453 ACGTAAGAGGACCAGGAGAAG 58.552 52.381 0.00 0.00 43.62 2.85
6741 9938 4.647611 ACACAAACCTCGAACCATATTCA 58.352 39.130 0.00 0.00 0.00 2.57
6743 9940 3.682858 ACAAACCTCGAACCATATTCACG 59.317 43.478 0.00 0.00 0.00 4.35
6747 9944 0.466543 TCGAACCATATTCACGGGGG 59.533 55.000 0.00 0.00 0.00 5.40
6750 9947 1.489230 GAACCATATTCACGGGGGAGT 59.511 52.381 0.00 0.00 0.00 3.85
6751 9948 2.482414 ACCATATTCACGGGGGAGTA 57.518 50.000 0.00 0.00 0.00 2.59
6761 9958 4.065281 GGGGAGTACACGCACGCT 62.065 66.667 9.43 0.00 0.00 5.07
6764 9961 1.801913 GGAGTACACGCACGCTCAG 60.802 63.158 0.00 0.00 0.00 3.35
6766 9963 2.733218 GTACACGCACGCTCAGCA 60.733 61.111 0.00 0.00 0.00 4.41
6771 9968 2.097160 CGCACGCTCAGCACATTC 59.903 61.111 0.00 0.00 0.00 2.67
6801 9998 0.460987 CTCCTTCCACTTGCTAGCCG 60.461 60.000 13.29 5.89 0.00 5.52
6802 9999 2.109126 CCTTCCACTTGCTAGCCGC 61.109 63.158 13.29 0.00 39.77 6.53
6803 10000 2.046314 TTCCACTTGCTAGCCGCC 60.046 61.111 13.29 0.00 38.05 6.13
6804 10001 2.527951 CTTCCACTTGCTAGCCGCCT 62.528 60.000 13.29 0.00 38.05 5.52
6805 10002 2.803155 TTCCACTTGCTAGCCGCCTG 62.803 60.000 13.29 2.10 38.05 4.85
6806 10003 2.046892 CACTTGCTAGCCGCCTGT 60.047 61.111 13.29 0.85 38.05 4.00
6807 10004 1.672356 CACTTGCTAGCCGCCTGTT 60.672 57.895 13.29 0.00 38.05 3.16
6808 10005 0.391130 CACTTGCTAGCCGCCTGTTA 60.391 55.000 13.29 0.00 38.05 2.41
6809 10006 0.108138 ACTTGCTAGCCGCCTGTTAG 60.108 55.000 13.29 0.00 38.05 2.34
6810 10007 0.811616 CTTGCTAGCCGCCTGTTAGG 60.812 60.000 13.29 0.00 38.80 2.69
6819 10016 4.153957 CCTGTTAGGCCCAGTCCT 57.846 61.111 0.00 0.00 40.21 3.85
6820 10017 3.317280 CCTGTTAGGCCCAGTCCTA 57.683 57.895 0.00 0.00 37.66 2.94
6821 10018 1.123928 CCTGTTAGGCCCAGTCCTAG 58.876 60.000 0.00 0.00 39.66 3.02
6822 10019 0.466124 CTGTTAGGCCCAGTCCTAGC 59.534 60.000 0.00 0.00 39.66 3.42
6823 10020 0.042731 TGTTAGGCCCAGTCCTAGCT 59.957 55.000 0.00 0.00 39.68 3.32
6824 10021 0.753867 GTTAGGCCCAGTCCTAGCTC 59.246 60.000 0.00 0.00 39.66 4.09
6825 10022 0.398664 TTAGGCCCAGTCCTAGCTCC 60.399 60.000 0.00 0.00 39.66 4.70
6826 10023 1.297409 TAGGCCCAGTCCTAGCTCCT 61.297 60.000 0.00 0.00 37.66 3.69
6827 10024 2.137528 GGCCCAGTCCTAGCTCCTC 61.138 68.421 0.00 0.00 0.00 3.71
6828 10025 2.137528 GCCCAGTCCTAGCTCCTCC 61.138 68.421 0.00 0.00 0.00 4.30
6829 10026 1.311403 CCCAGTCCTAGCTCCTCCA 59.689 63.158 0.00 0.00 0.00 3.86
6830 10027 1.045911 CCCAGTCCTAGCTCCTCCAC 61.046 65.000 0.00 0.00 0.00 4.02
6831 10028 0.032615 CCAGTCCTAGCTCCTCCACT 60.033 60.000 0.00 0.00 0.00 4.00
6832 10029 1.110442 CAGTCCTAGCTCCTCCACTG 58.890 60.000 0.00 0.00 0.00 3.66
6833 10030 0.707616 AGTCCTAGCTCCTCCACTGT 59.292 55.000 0.00 0.00 0.00 3.55
6834 10031 1.077993 AGTCCTAGCTCCTCCACTGTT 59.922 52.381 0.00 0.00 0.00 3.16
6835 10032 1.478916 GTCCTAGCTCCTCCACTGTTC 59.521 57.143 0.00 0.00 0.00 3.18
6836 10033 0.827368 CCTAGCTCCTCCACTGTTCC 59.173 60.000 0.00 0.00 0.00 3.62
6837 10034 1.621072 CCTAGCTCCTCCACTGTTCCT 60.621 57.143 0.00 0.00 0.00 3.36
6838 10035 1.480137 CTAGCTCCTCCACTGTTCCTG 59.520 57.143 0.00 0.00 0.00 3.86
6839 10036 0.472734 AGCTCCTCCACTGTTCCTGT 60.473 55.000 0.00 0.00 0.00 4.00
6840 10037 0.321122 GCTCCTCCACTGTTCCTGTG 60.321 60.000 0.00 0.00 33.98 3.66
6841 10038 1.051812 CTCCTCCACTGTTCCTGTGT 58.948 55.000 0.00 0.00 32.65 3.72
6842 10039 0.758734 TCCTCCACTGTTCCTGTGTG 59.241 55.000 0.00 0.00 32.65 3.82
6843 10040 0.886490 CCTCCACTGTTCCTGTGTGC 60.886 60.000 0.00 0.00 32.65 4.57
6844 10041 0.886490 CTCCACTGTTCCTGTGTGCC 60.886 60.000 0.00 0.00 32.65 5.01
6845 10042 2.253758 CCACTGTTCCTGTGTGCCG 61.254 63.158 0.00 0.00 32.65 5.69
6846 10043 2.591715 ACTGTTCCTGTGTGCCGC 60.592 61.111 0.00 0.00 0.00 6.53
6847 10044 2.281070 CTGTTCCTGTGTGCCGCT 60.281 61.111 0.00 0.00 0.00 5.52
6848 10045 2.591429 TGTTCCTGTGTGCCGCTG 60.591 61.111 0.00 0.00 0.00 5.18
6849 10046 3.357079 GTTCCTGTGTGCCGCTGG 61.357 66.667 0.00 5.64 34.90 4.85
6850 10047 4.641645 TTCCTGTGTGCCGCTGGG 62.642 66.667 10.31 0.00 34.46 4.45
6852 10049 4.415150 CCTGTGTGCCGCTGGGAT 62.415 66.667 0.00 0.00 34.06 3.85
6853 10050 2.360350 CTGTGTGCCGCTGGGATT 60.360 61.111 0.00 0.00 34.06 3.01
6854 10051 1.973281 CTGTGTGCCGCTGGGATTT 60.973 57.895 0.00 0.00 34.06 2.17
6855 10052 1.926511 CTGTGTGCCGCTGGGATTTC 61.927 60.000 0.00 0.00 34.06 2.17
6856 10053 1.675641 GTGTGCCGCTGGGATTTCT 60.676 57.895 0.00 0.00 34.06 2.52
6857 10054 1.675310 TGTGCCGCTGGGATTTCTG 60.675 57.895 0.00 0.00 34.06 3.02
6858 10055 1.675641 GTGCCGCTGGGATTTCTGT 60.676 57.895 0.00 0.00 34.06 3.41
6859 10056 1.074775 TGCCGCTGGGATTTCTGTT 59.925 52.632 0.00 0.00 34.06 3.16
6860 10057 0.960364 TGCCGCTGGGATTTCTGTTC 60.960 55.000 0.00 0.00 34.06 3.18
6861 10058 1.982073 GCCGCTGGGATTTCTGTTCG 61.982 60.000 0.00 0.00 34.06 3.95
6862 10059 0.673644 CCGCTGGGATTTCTGTTCGT 60.674 55.000 0.00 0.00 34.06 3.85
6863 10060 0.721718 CGCTGGGATTTCTGTTCGTC 59.278 55.000 0.00 0.00 0.00 4.20
6864 10061 0.721718 GCTGGGATTTCTGTTCGTCG 59.278 55.000 0.00 0.00 0.00 5.12
6865 10062 1.671850 GCTGGGATTTCTGTTCGTCGA 60.672 52.381 0.00 0.00 0.00 4.20
6866 10063 2.893637 CTGGGATTTCTGTTCGTCGAT 58.106 47.619 0.00 0.00 0.00 3.59
6867 10064 2.860735 CTGGGATTTCTGTTCGTCGATC 59.139 50.000 0.00 0.00 0.00 3.69
6868 10065 1.852895 GGGATTTCTGTTCGTCGATCG 59.147 52.381 9.36 9.36 41.41 3.69
6869 10066 1.255600 GGATTTCTGTTCGTCGATCGC 59.744 52.381 11.09 4.79 39.67 4.58
6870 10067 1.255600 GATTTCTGTTCGTCGATCGCC 59.744 52.381 11.09 0.00 39.67 5.54
6871 10068 0.734942 TTTCTGTTCGTCGATCGCCC 60.735 55.000 11.09 2.15 39.67 6.13
6872 10069 1.868987 TTCTGTTCGTCGATCGCCCA 61.869 55.000 11.09 1.28 39.67 5.36
6873 10070 1.226974 CTGTTCGTCGATCGCCCAT 60.227 57.895 11.09 0.00 39.67 4.00
6874 10071 1.209275 CTGTTCGTCGATCGCCCATC 61.209 60.000 11.09 1.51 39.67 3.51
6875 10072 1.065928 GTTCGTCGATCGCCCATCT 59.934 57.895 11.09 0.00 39.67 2.90
6876 10073 0.309922 GTTCGTCGATCGCCCATCTA 59.690 55.000 11.09 0.00 39.67 1.98
6877 10074 1.026584 TTCGTCGATCGCCCATCTAA 58.973 50.000 11.09 0.00 39.67 2.10
6878 10075 0.309922 TCGTCGATCGCCCATCTAAC 59.690 55.000 11.09 0.00 39.67 2.34
6879 10076 0.997226 CGTCGATCGCCCATCTAACG 60.997 60.000 11.09 8.79 34.19 3.18
6880 10077 0.663568 GTCGATCGCCCATCTAACGG 60.664 60.000 11.09 0.00 0.00 4.44
6881 10078 2.022129 CGATCGCCCATCTAACGGC 61.022 63.158 0.26 0.00 42.05 5.68
6882 10079 1.367840 GATCGCCCATCTAACGGCT 59.632 57.895 0.00 0.00 43.38 5.52
6883 10080 0.667792 GATCGCCCATCTAACGGCTC 60.668 60.000 0.00 0.00 43.38 4.70
6884 10081 1.399744 ATCGCCCATCTAACGGCTCA 61.400 55.000 0.00 0.00 43.38 4.26
6885 10082 1.883084 CGCCCATCTAACGGCTCAC 60.883 63.158 0.00 0.00 43.38 3.51
6886 10083 1.220749 GCCCATCTAACGGCTCACA 59.779 57.895 0.00 0.00 42.21 3.58
6887 10084 0.179045 GCCCATCTAACGGCTCACAT 60.179 55.000 0.00 0.00 42.21 3.21
6888 10085 1.747206 GCCCATCTAACGGCTCACATT 60.747 52.381 0.00 0.00 42.21 2.71
6889 10086 1.942657 CCCATCTAACGGCTCACATTG 59.057 52.381 0.00 0.00 0.00 2.82
6890 10087 1.942657 CCATCTAACGGCTCACATTGG 59.057 52.381 0.00 0.00 0.00 3.16
6891 10088 2.419990 CCATCTAACGGCTCACATTGGA 60.420 50.000 0.00 0.00 0.00 3.53
6892 10089 2.672961 TCTAACGGCTCACATTGGAG 57.327 50.000 0.00 0.00 37.97 3.86
6893 10090 1.207089 TCTAACGGCTCACATTGGAGG 59.793 52.381 0.00 0.00 35.41 4.30
6894 10091 1.207089 CTAACGGCTCACATTGGAGGA 59.793 52.381 0.00 0.00 35.41 3.71
6895 10092 0.620556 AACGGCTCACATTGGAGGAT 59.379 50.000 0.00 0.00 35.41 3.24
6896 10093 1.496060 ACGGCTCACATTGGAGGATA 58.504 50.000 0.00 0.00 35.41 2.59
6897 10094 1.139058 ACGGCTCACATTGGAGGATAC 59.861 52.381 0.00 0.00 35.41 2.24
6898 10095 1.541233 CGGCTCACATTGGAGGATACC 60.541 57.143 0.00 0.00 35.41 2.73
6899 10096 1.541233 GGCTCACATTGGAGGATACCG 60.541 57.143 0.00 0.00 35.41 4.02
6900 10097 1.541233 GCTCACATTGGAGGATACCGG 60.541 57.143 0.00 0.00 35.41 5.28
6901 10098 1.762957 CTCACATTGGAGGATACCGGT 59.237 52.381 13.98 13.98 37.17 5.28
6902 10099 2.170607 CTCACATTGGAGGATACCGGTT 59.829 50.000 15.04 0.00 37.17 4.44
6903 10100 2.169769 TCACATTGGAGGATACCGGTTC 59.830 50.000 15.04 10.43 37.17 3.62
6904 10101 1.138266 ACATTGGAGGATACCGGTTCG 59.862 52.381 15.04 0.00 37.17 3.95
6905 10102 0.106149 ATTGGAGGATACCGGTTCGC 59.894 55.000 15.04 4.86 37.17 4.70
6906 10103 0.974010 TTGGAGGATACCGGTTCGCT 60.974 55.000 15.04 9.55 37.17 4.93
6907 10104 0.106569 TGGAGGATACCGGTTCGCTA 60.107 55.000 15.04 0.00 37.17 4.26
6908 10105 0.597072 GGAGGATACCGGTTCGCTAG 59.403 60.000 15.04 0.00 37.17 3.42
6909 10106 0.039346 GAGGATACCGGTTCGCTAGC 60.039 60.000 15.04 4.06 37.17 3.42
6910 10107 0.754217 AGGATACCGGTTCGCTAGCA 60.754 55.000 15.04 0.00 37.17 3.49
6911 10108 0.317479 GGATACCGGTTCGCTAGCAT 59.683 55.000 15.04 0.00 0.00 3.79
6912 10109 1.419374 GATACCGGTTCGCTAGCATG 58.581 55.000 15.04 0.00 0.00 4.06
6913 10110 0.033504 ATACCGGTTCGCTAGCATGG 59.966 55.000 15.04 10.50 0.00 3.66
6914 10111 1.038681 TACCGGTTCGCTAGCATGGA 61.039 55.000 15.04 0.50 0.00 3.41
6915 10112 1.883084 CCGGTTCGCTAGCATGGAC 60.883 63.158 16.45 3.89 0.00 4.02
6916 10113 2.230940 CGGTTCGCTAGCATGGACG 61.231 63.158 16.45 8.39 0.00 4.79
6917 10114 1.141019 GGTTCGCTAGCATGGACGA 59.859 57.895 16.45 0.00 0.00 4.20
6918 10115 0.249489 GGTTCGCTAGCATGGACGAT 60.249 55.000 16.45 0.00 34.07 3.73
6919 10116 1.132588 GTTCGCTAGCATGGACGATC 58.867 55.000 16.45 0.00 34.07 3.69
6920 10117 1.032794 TTCGCTAGCATGGACGATCT 58.967 50.000 16.45 0.00 34.07 2.75
6921 10118 0.593618 TCGCTAGCATGGACGATCTC 59.406 55.000 16.45 0.00 0.00 2.75
6922 10119 0.387878 CGCTAGCATGGACGATCTCC 60.388 60.000 16.45 4.71 39.97 3.71
6931 10128 1.694150 TGGACGATCTCCATCCATTCC 59.306 52.381 9.14 0.00 44.99 3.01
6932 10129 1.974236 GGACGATCTCCATCCATTCCT 59.026 52.381 0.00 0.00 39.21 3.36
6933 10130 2.370189 GGACGATCTCCATCCATTCCTT 59.630 50.000 0.00 0.00 39.21 3.36
6934 10131 3.397482 GACGATCTCCATCCATTCCTTG 58.603 50.000 0.00 0.00 0.00 3.61
6935 10132 3.041211 ACGATCTCCATCCATTCCTTGA 58.959 45.455 0.00 0.00 0.00 3.02
6936 10133 3.455910 ACGATCTCCATCCATTCCTTGAA 59.544 43.478 0.00 0.00 0.00 2.69
6937 10134 4.063689 CGATCTCCATCCATTCCTTGAAG 58.936 47.826 0.00 0.00 0.00 3.02
6938 10135 4.202295 CGATCTCCATCCATTCCTTGAAGA 60.202 45.833 0.00 0.00 0.00 2.87
6939 10136 5.512749 CGATCTCCATCCATTCCTTGAAGAT 60.513 44.000 0.00 0.00 0.00 2.40
6940 10137 5.301835 TCTCCATCCATTCCTTGAAGATC 57.698 43.478 0.00 0.00 0.00 2.75
6941 10138 4.103785 TCTCCATCCATTCCTTGAAGATCC 59.896 45.833 0.00 0.00 0.00 3.36
6942 10139 3.787577 TCCATCCATTCCTTGAAGATCCA 59.212 43.478 0.00 0.00 0.00 3.41
6943 10140 4.230272 TCCATCCATTCCTTGAAGATCCAA 59.770 41.667 0.00 0.00 0.00 3.53
6944 10141 4.340381 CCATCCATTCCTTGAAGATCCAAC 59.660 45.833 0.00 0.00 0.00 3.77
6945 10142 4.656100 TCCATTCCTTGAAGATCCAACA 57.344 40.909 0.00 0.00 0.00 3.33
6946 10143 4.592942 TCCATTCCTTGAAGATCCAACAG 58.407 43.478 0.00 0.00 0.00 3.16
6947 10144 3.129988 CCATTCCTTGAAGATCCAACAGC 59.870 47.826 0.00 0.00 0.00 4.40
6948 10145 3.795688 TTCCTTGAAGATCCAACAGCT 57.204 42.857 0.00 0.00 0.00 4.24
6949 10146 4.908601 TTCCTTGAAGATCCAACAGCTA 57.091 40.909 0.00 0.00 0.00 3.32
6950 10147 5.441718 TTCCTTGAAGATCCAACAGCTAT 57.558 39.130 0.00 0.00 0.00 2.97
6951 10148 4.774124 TCCTTGAAGATCCAACAGCTATG 58.226 43.478 0.00 0.00 0.00 2.23
6952 10149 3.881688 CCTTGAAGATCCAACAGCTATGG 59.118 47.826 10.77 10.77 39.41 2.74
6959 10156 1.559682 TCCAACAGCTATGGAAGACCC 59.440 52.381 16.05 0.00 43.84 4.46
6968 10165 1.377202 TGGAAGACCCAAGCATCGC 60.377 57.895 0.00 0.00 43.29 4.58
6969 10166 1.078143 GGAAGACCCAAGCATCGCT 60.078 57.895 0.00 0.00 42.56 4.93
6970 10167 0.178068 GGAAGACCCAAGCATCGCTA 59.822 55.000 0.00 0.00 38.25 4.26
6971 10168 1.202698 GGAAGACCCAAGCATCGCTAT 60.203 52.381 0.00 0.00 38.25 2.97
6972 10169 2.037251 GGAAGACCCAAGCATCGCTATA 59.963 50.000 0.00 0.00 38.25 1.31
6973 10170 3.321497 GAAGACCCAAGCATCGCTATAG 58.679 50.000 0.00 0.00 38.25 1.31
6974 10171 1.001406 AGACCCAAGCATCGCTATAGC 59.999 52.381 15.09 15.09 38.25 2.97
6975 10172 1.001406 GACCCAAGCATCGCTATAGCT 59.999 52.381 21.98 1.65 38.25 3.32
6977 10174 2.158755 ACCCAAGCATCGCTATAGCTTT 60.159 45.455 21.98 6.80 45.57 3.51
6978 10175 2.880890 CCCAAGCATCGCTATAGCTTTT 59.119 45.455 21.98 4.29 45.57 2.27
6979 10176 3.058639 CCCAAGCATCGCTATAGCTTTTC 60.059 47.826 21.98 9.06 45.57 2.29
6980 10177 3.058639 CCAAGCATCGCTATAGCTTTTCC 60.059 47.826 21.98 7.08 45.57 3.13
6981 10178 2.408050 AGCATCGCTATAGCTTTTCCG 58.592 47.619 21.98 5.97 36.99 4.30
6982 10179 2.035961 AGCATCGCTATAGCTTTTCCGA 59.964 45.455 21.98 11.17 36.99 4.55
6983 10180 2.155924 GCATCGCTATAGCTTTTCCGAC 59.844 50.000 21.98 0.69 39.32 4.79
6984 10181 3.381045 CATCGCTATAGCTTTTCCGACA 58.619 45.455 21.98 0.00 39.32 4.35
6985 10182 3.513680 TCGCTATAGCTTTTCCGACAA 57.486 42.857 21.98 0.00 39.32 3.18
6986 10183 3.444916 TCGCTATAGCTTTTCCGACAAG 58.555 45.455 21.98 2.62 39.32 3.16
6987 10184 2.033662 CGCTATAGCTTTTCCGACAAGC 60.034 50.000 21.98 10.72 46.05 4.01
6988 10185 2.288186 GCTATAGCTTTTCCGACAAGCC 59.712 50.000 17.75 0.00 46.76 4.35
6989 10186 2.489938 ATAGCTTTTCCGACAAGCCA 57.510 45.000 14.34 3.01 46.76 4.75
6990 10187 2.489938 TAGCTTTTCCGACAAGCCAT 57.510 45.000 14.34 1.76 46.76 4.40
6991 10188 0.883833 AGCTTTTCCGACAAGCCATG 59.116 50.000 14.34 0.00 46.76 3.66
6992 10189 1.819305 AGCTTTTCCGACAAGCCATGT 60.819 47.619 14.34 0.00 46.76 3.21
6993 10190 1.666888 GCTTTTCCGACAAGCCATGTG 60.667 52.381 7.90 0.00 44.12 3.21
6994 10191 0.313672 TTTTCCGACAAGCCATGTGC 59.686 50.000 0.00 0.00 44.12 4.57
7005 10202 1.457346 GCCATGTGCTCTGCTTTACT 58.543 50.000 0.00 0.00 36.87 2.24
7006 10203 1.815003 GCCATGTGCTCTGCTTTACTT 59.185 47.619 0.00 0.00 36.87 2.24
7007 10204 2.229784 GCCATGTGCTCTGCTTTACTTT 59.770 45.455 0.00 0.00 36.87 2.66
7008 10205 3.671702 GCCATGTGCTCTGCTTTACTTTC 60.672 47.826 0.00 0.00 36.87 2.62
7009 10206 3.755378 CCATGTGCTCTGCTTTACTTTCT 59.245 43.478 0.00 0.00 0.00 2.52
7010 10207 4.217118 CCATGTGCTCTGCTTTACTTTCTT 59.783 41.667 0.00 0.00 0.00 2.52
7011 10208 5.388944 CATGTGCTCTGCTTTACTTTCTTC 58.611 41.667 0.00 0.00 0.00 2.87
7012 10209 4.708177 TGTGCTCTGCTTTACTTTCTTCT 58.292 39.130 0.00 0.00 0.00 2.85
7013 10210 5.126067 TGTGCTCTGCTTTACTTTCTTCTT 58.874 37.500 0.00 0.00 0.00 2.52
7014 10211 5.237344 TGTGCTCTGCTTTACTTTCTTCTTC 59.763 40.000 0.00 0.00 0.00 2.87
7015 10212 5.468409 GTGCTCTGCTTTACTTTCTTCTTCT 59.532 40.000 0.00 0.00 0.00 2.85
7016 10213 6.017523 GTGCTCTGCTTTACTTTCTTCTTCTT 60.018 38.462 0.00 0.00 0.00 2.52
7017 10214 6.543831 TGCTCTGCTTTACTTTCTTCTTCTTT 59.456 34.615 0.00 0.00 0.00 2.52
7018 10215 7.067494 TGCTCTGCTTTACTTTCTTCTTCTTTT 59.933 33.333 0.00 0.00 0.00 2.27
7019 10216 7.918033 GCTCTGCTTTACTTTCTTCTTCTTTTT 59.082 33.333 0.00 0.00 0.00 1.94
7020 10217 9.444534 CTCTGCTTTACTTTCTTCTTCTTTTTC 57.555 33.333 0.00 0.00 0.00 2.29
7021 10218 8.956426 TCTGCTTTACTTTCTTCTTCTTTTTCA 58.044 29.630 0.00 0.00 0.00 2.69
7022 10219 8.911247 TGCTTTACTTTCTTCTTCTTTTTCAC 57.089 30.769 0.00 0.00 0.00 3.18
7023 10220 8.739972 TGCTTTACTTTCTTCTTCTTTTTCACT 58.260 29.630 0.00 0.00 0.00 3.41
7024 10221 9.227490 GCTTTACTTTCTTCTTCTTTTTCACTC 57.773 33.333 0.00 0.00 0.00 3.51
7025 10222 9.427127 CTTTACTTTCTTCTTCTTTTTCACTCG 57.573 33.333 0.00 0.00 0.00 4.18
7026 10223 8.712285 TTACTTTCTTCTTCTTTTTCACTCGA 57.288 30.769 0.00 0.00 0.00 4.04
7027 10224 7.793927 ACTTTCTTCTTCTTTTTCACTCGAT 57.206 32.000 0.00 0.00 0.00 3.59
7028 10225 7.634522 ACTTTCTTCTTCTTTTTCACTCGATG 58.365 34.615 0.00 0.00 0.00 3.84
7029 10226 7.281100 ACTTTCTTCTTCTTTTTCACTCGATGT 59.719 33.333 0.00 0.00 0.00 3.06
7030 10227 8.657074 TTTCTTCTTCTTTTTCACTCGATGTA 57.343 30.769 0.00 0.00 0.00 2.29
7031 10228 8.657074 TTCTTCTTCTTTTTCACTCGATGTAA 57.343 30.769 0.00 0.00 0.00 2.41
7032 10229 8.833231 TCTTCTTCTTTTTCACTCGATGTAAT 57.167 30.769 0.00 0.00 0.00 1.89
7033 10230 8.712363 TCTTCTTCTTTTTCACTCGATGTAATG 58.288 33.333 0.00 0.00 0.00 1.90
7034 10231 7.364522 TCTTCTTTTTCACTCGATGTAATGG 57.635 36.000 0.00 0.00 0.00 3.16
7035 10232 5.545658 TCTTTTTCACTCGATGTAATGGC 57.454 39.130 0.00 0.00 0.00 4.40
7036 10233 5.245531 TCTTTTTCACTCGATGTAATGGCT 58.754 37.500 0.00 0.00 0.00 4.75
7037 10234 5.351465 TCTTTTTCACTCGATGTAATGGCTC 59.649 40.000 0.00 0.00 0.00 4.70
7038 10235 4.471904 TTTCACTCGATGTAATGGCTCT 57.528 40.909 0.00 0.00 0.00 4.09
7039 10236 5.592104 TTTCACTCGATGTAATGGCTCTA 57.408 39.130 0.00 0.00 0.00 2.43
7040 10237 5.592104 TTCACTCGATGTAATGGCTCTAA 57.408 39.130 0.00 0.00 0.00 2.10
7041 10238 5.592104 TCACTCGATGTAATGGCTCTAAA 57.408 39.130 0.00 0.00 0.00 1.85
7042 10239 5.592054 TCACTCGATGTAATGGCTCTAAAG 58.408 41.667 0.00 0.00 0.00 1.85
7051 10248 4.549793 GCTCTAAAGCCAGCCTCC 57.450 61.111 0.00 0.00 43.10 4.30
7052 10249 1.911471 GCTCTAAAGCCAGCCTCCT 59.089 57.895 0.00 0.00 43.10 3.69
7053 10250 0.179059 GCTCTAAAGCCAGCCTCCTC 60.179 60.000 0.00 0.00 43.10 3.71
7054 10251 0.467804 CTCTAAAGCCAGCCTCCTCC 59.532 60.000 0.00 0.00 0.00 4.30
7055 10252 0.983378 TCTAAAGCCAGCCTCCTCCC 60.983 60.000 0.00 0.00 0.00 4.30
7056 10253 0.985490 CTAAAGCCAGCCTCCTCCCT 60.985 60.000 0.00 0.00 0.00 4.20
7057 10254 0.983378 TAAAGCCAGCCTCCTCCCTC 60.983 60.000 0.00 0.00 0.00 4.30
7058 10255 3.569361 AAGCCAGCCTCCTCCCTCA 62.569 63.158 0.00 0.00 0.00 3.86
7059 10256 2.771762 GCCAGCCTCCTCCCTCAT 60.772 66.667 0.00 0.00 0.00 2.90
7060 10257 2.381941 GCCAGCCTCCTCCCTCATT 61.382 63.158 0.00 0.00 0.00 2.57
7061 10258 1.835693 CCAGCCTCCTCCCTCATTC 59.164 63.158 0.00 0.00 0.00 2.67
7062 10259 0.693767 CCAGCCTCCTCCCTCATTCT 60.694 60.000 0.00 0.00 0.00 2.40
7063 10260 0.469070 CAGCCTCCTCCCTCATTCTG 59.531 60.000 0.00 0.00 0.00 3.02
7064 10261 0.693767 AGCCTCCTCCCTCATTCTGG 60.694 60.000 0.00 0.00 0.00 3.86
7065 10262 0.692419 GCCTCCTCCCTCATTCTGGA 60.692 60.000 0.00 0.00 0.00 3.86
7066 10263 1.127343 CCTCCTCCCTCATTCTGGAC 58.873 60.000 0.00 0.00 0.00 4.02
7067 10264 1.343884 CCTCCTCCCTCATTCTGGACT 60.344 57.143 0.00 0.00 0.00 3.85
7068 10265 2.091055 CCTCCTCCCTCATTCTGGACTA 60.091 54.545 0.00 0.00 0.00 2.59
7069 10266 3.439260 CCTCCTCCCTCATTCTGGACTAT 60.439 52.174 0.00 0.00 0.00 2.12
7070 10267 3.577848 CTCCTCCCTCATTCTGGACTATG 59.422 52.174 0.00 0.00 0.00 2.23
7071 10268 3.051803 TCCTCCCTCATTCTGGACTATGT 60.052 47.826 0.00 0.00 0.00 2.29
7072 10269 3.713764 CCTCCCTCATTCTGGACTATGTT 59.286 47.826 0.00 0.00 0.00 2.71
7073 10270 4.444022 CCTCCCTCATTCTGGACTATGTTG 60.444 50.000 0.00 0.00 0.00 3.33
7074 10271 4.361783 TCCCTCATTCTGGACTATGTTGA 58.638 43.478 0.00 0.00 0.00 3.18
7075 10272 4.782691 TCCCTCATTCTGGACTATGTTGAA 59.217 41.667 0.00 0.00 0.00 2.69
7076 10273 5.429762 TCCCTCATTCTGGACTATGTTGAAT 59.570 40.000 0.00 0.00 0.00 2.57
7077 10274 6.069440 TCCCTCATTCTGGACTATGTTGAATT 60.069 38.462 0.00 0.00 0.00 2.17
7078 10275 7.127186 TCCCTCATTCTGGACTATGTTGAATTA 59.873 37.037 0.00 0.00 0.00 1.40
7079 10276 7.941238 CCCTCATTCTGGACTATGTTGAATTAT 59.059 37.037 0.00 0.00 0.00 1.28
7080 10277 8.781196 CCTCATTCTGGACTATGTTGAATTATG 58.219 37.037 0.00 0.00 0.00 1.90
7081 10278 9.334947 CTCATTCTGGACTATGTTGAATTATGT 57.665 33.333 0.00 0.00 0.00 2.29
7082 10279 9.685276 TCATTCTGGACTATGTTGAATTATGTT 57.315 29.630 0.00 0.00 0.00 2.71
7083 10280 9.726232 CATTCTGGACTATGTTGAATTATGTTG 57.274 33.333 0.00 0.00 0.00 3.33
7084 10281 7.864108 TCTGGACTATGTTGAATTATGTTGG 57.136 36.000 0.00 0.00 0.00 3.77
7085 10282 6.828273 TCTGGACTATGTTGAATTATGTTGGG 59.172 38.462 0.00 0.00 0.00 4.12
7086 10283 6.489603 TGGACTATGTTGAATTATGTTGGGT 58.510 36.000 0.00 0.00 0.00 4.51
7087 10284 6.951198 TGGACTATGTTGAATTATGTTGGGTT 59.049 34.615 0.00 0.00 0.00 4.11
7088 10285 7.093988 TGGACTATGTTGAATTATGTTGGGTTG 60.094 37.037 0.00 0.00 0.00 3.77
7089 10286 7.093945 GGACTATGTTGAATTATGTTGGGTTGT 60.094 37.037 0.00 0.00 0.00 3.32
7090 10287 8.871629 ACTATGTTGAATTATGTTGGGTTGTA 57.128 30.769 0.00 0.00 0.00 2.41
7091 10288 9.303116 ACTATGTTGAATTATGTTGGGTTGTAA 57.697 29.630 0.00 0.00 0.00 2.41
7104 10301 2.572209 GTTGTAAACCCTAGCCACCA 57.428 50.000 0.00 0.00 42.21 4.17
7105 10302 2.433436 GTTGTAAACCCTAGCCACCAG 58.567 52.381 0.00 0.00 42.21 4.00
7106 10303 1.737199 TGTAAACCCTAGCCACCAGT 58.263 50.000 0.00 0.00 0.00 4.00
7107 10304 1.349688 TGTAAACCCTAGCCACCAGTG 59.650 52.381 0.00 0.00 0.00 3.66
7116 10313 2.662596 CCACCAGTGGCGAGCTAA 59.337 61.111 9.78 0.00 44.73 3.09
7117 10314 1.003839 CCACCAGTGGCGAGCTAAA 60.004 57.895 9.78 0.00 44.73 1.85
7118 10315 1.298859 CCACCAGTGGCGAGCTAAAC 61.299 60.000 9.78 0.00 44.73 2.01
7119 10316 0.320771 CACCAGTGGCGAGCTAAACT 60.321 55.000 9.78 0.00 0.00 2.66
7120 10317 1.067142 CACCAGTGGCGAGCTAAACTA 60.067 52.381 9.78 0.00 0.00 2.24
7121 10318 1.067071 ACCAGTGGCGAGCTAAACTAC 60.067 52.381 9.78 0.00 0.00 2.73
7122 10319 1.204941 CCAGTGGCGAGCTAAACTACT 59.795 52.381 0.00 0.00 0.00 2.57
7123 10320 2.353803 CCAGTGGCGAGCTAAACTACTT 60.354 50.000 0.00 0.00 0.00 2.24
7124 10321 3.326747 CAGTGGCGAGCTAAACTACTTT 58.673 45.455 0.00 0.00 0.00 2.66
7125 10322 3.368236 CAGTGGCGAGCTAAACTACTTTC 59.632 47.826 0.00 0.00 0.00 2.62
7126 10323 2.671888 GTGGCGAGCTAAACTACTTTCC 59.328 50.000 0.00 0.00 0.00 3.13
7127 10324 2.277969 GGCGAGCTAAACTACTTTCCC 58.722 52.381 0.00 0.00 0.00 3.97
7128 10325 2.354403 GGCGAGCTAAACTACTTTCCCA 60.354 50.000 0.00 0.00 0.00 4.37
7129 10326 3.532542 GCGAGCTAAACTACTTTCCCAT 58.467 45.455 0.00 0.00 0.00 4.00
7130 10327 3.939592 GCGAGCTAAACTACTTTCCCATT 59.060 43.478 0.00 0.00 0.00 3.16
7131 10328 4.034163 GCGAGCTAAACTACTTTCCCATTC 59.966 45.833 0.00 0.00 0.00 2.67
7132 10329 5.420409 CGAGCTAAACTACTTTCCCATTCT 58.580 41.667 0.00 0.00 0.00 2.40
7133 10330 5.292101 CGAGCTAAACTACTTTCCCATTCTG 59.708 44.000 0.00 0.00 0.00 3.02
7134 10331 5.501156 AGCTAAACTACTTTCCCATTCTGG 58.499 41.667 0.00 0.00 37.25 3.86
7135 10332 5.014228 AGCTAAACTACTTTCCCATTCTGGT 59.986 40.000 0.00 0.00 35.17 4.00
7136 10333 5.123979 GCTAAACTACTTTCCCATTCTGGTG 59.876 44.000 0.00 0.00 35.17 4.17
7137 10334 4.993705 AACTACTTTCCCATTCTGGTGA 57.006 40.909 0.00 0.00 35.17 4.02
7138 10335 4.993705 ACTACTTTCCCATTCTGGTGAA 57.006 40.909 0.00 0.00 35.17 3.18
7139 10336 4.911390 ACTACTTTCCCATTCTGGTGAAG 58.089 43.478 4.95 4.95 35.17 3.02
7140 10337 4.597507 ACTACTTTCCCATTCTGGTGAAGA 59.402 41.667 10.79 0.00 35.17 2.87
7151 10348 4.618920 TCTGGTGAAGAAACCCTAGTTC 57.381 45.455 0.00 0.00 39.70 3.01
7152 10349 3.326880 TCTGGTGAAGAAACCCTAGTTCC 59.673 47.826 0.00 0.00 39.70 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.148310 CATGGTCGAATATGACGGGC 58.852 55.000 4.57 0.00 39.83 6.13
22 23 2.812358 TCATGGTCGAATATGACGGG 57.188 50.000 8.35 0.00 39.83 5.28
29 30 6.539826 GGATATGCATTGATCATGGTCGAATA 59.460 38.462 3.54 0.00 32.81 1.75
33 34 3.376234 GGGATATGCATTGATCATGGTCG 59.624 47.826 3.54 0.00 32.81 4.79
64 65 4.468769 ATGCACCAGGGGCCATGG 62.469 66.667 34.29 34.29 43.87 3.66
122 123 2.611518 GTCTGGAGAAGGATCAACACG 58.388 52.381 0.00 0.00 0.00 4.49
135 144 1.811266 CGCAATCGGTGGTCTGGAG 60.811 63.158 0.00 0.00 0.00 3.86
137 146 3.499737 GCGCAATCGGTGGTCTGG 61.500 66.667 0.30 0.00 35.95 3.86
172 181 5.990120 AAATGCTTTGATAGGGGATATGC 57.010 39.130 0.00 0.00 0.00 3.14
187 196 3.843893 AAACTTCCAGCCAAAATGCTT 57.156 38.095 0.00 0.00 40.32 3.91
211 220 1.870580 CGCTGGGACGACTGTTAACAA 60.871 52.381 10.03 0.00 34.06 2.83
258 267 5.543714 AGTCTGAGATGATGAGAATGATGC 58.456 41.667 0.00 0.00 0.00 3.91
271 280 4.078537 ACCGGATGATCTAGTCTGAGATG 58.921 47.826 9.46 0.00 36.27 2.90
285 294 2.093021 TGCAAGATGATGAACCGGATGA 60.093 45.455 9.46 0.00 0.00 2.92
291 300 3.084039 TGAACCTGCAAGATGATGAACC 58.916 45.455 0.00 0.00 34.07 3.62
348 357 1.474478 TGAGAGTGGATCGCAGAAGAC 59.526 52.381 0.00 0.00 43.58 3.01
387 396 0.107703 TTCCCATCTGTGATCGTGGC 60.108 55.000 0.00 0.00 0.00 5.01
429 438 1.448922 TTTCGGCCTTGTTGGAACCG 61.449 55.000 0.00 0.00 41.10 4.44
480 489 2.022918 TCCCCCTTCTCCTCCTCTAAAG 60.023 54.545 0.00 0.00 0.00 1.85
481 490 2.016096 TCCCCCTTCTCCTCCTCTAAA 58.984 52.381 0.00 0.00 0.00 1.85
503 512 1.590147 GTCTCGTCACCGTTCCCAT 59.410 57.895 0.00 0.00 35.01 4.00
504 513 2.911484 CGTCTCGTCACCGTTCCCA 61.911 63.158 0.00 0.00 35.01 4.37
512 521 1.134530 CTTCGATGGCGTCTCGTCAC 61.135 60.000 5.00 0.00 46.32 3.67
518 527 1.000827 CATCTAGCTTCGATGGCGTCT 60.001 52.381 14.61 0.00 38.98 4.18
525 534 5.121611 CGTGAGTATCTCATCTAGCTTCGAT 59.878 44.000 0.00 0.00 42.73 3.59
534 543 0.955178 CCGCCGTGAGTATCTCATCT 59.045 55.000 2.80 0.00 42.73 2.90
539 548 2.442272 AGGCCGCCGTGAGTATCT 60.442 61.111 3.05 0.00 34.92 1.98
563 572 2.902457 TTTTCCAGTCCTCCGGCCC 61.902 63.158 0.00 0.00 0.00 5.80
564 573 1.674651 GTTTTCCAGTCCTCCGGCC 60.675 63.158 0.00 0.00 0.00 6.13
652 661 3.336694 AGGGCTCATTCTAAGGGGAAAAA 59.663 43.478 0.00 0.00 0.00 1.94
653 662 2.926329 AGGGCTCATTCTAAGGGGAAAA 59.074 45.455 0.00 0.00 0.00 2.29
654 663 2.573463 AGGGCTCATTCTAAGGGGAAA 58.427 47.619 0.00 0.00 0.00 3.13
655 664 2.242196 CAAGGGCTCATTCTAAGGGGAA 59.758 50.000 0.00 0.00 0.00 3.97
656 665 1.846439 CAAGGGCTCATTCTAAGGGGA 59.154 52.381 0.00 0.00 0.00 4.81
657 666 1.846439 TCAAGGGCTCATTCTAAGGGG 59.154 52.381 0.00 0.00 0.00 4.79
660 669 2.555199 CGGTCAAGGGCTCATTCTAAG 58.445 52.381 0.00 0.00 0.00 2.18
663 672 0.909610 TCCGGTCAAGGGCTCATTCT 60.910 55.000 0.00 0.00 0.00 2.40
687 696 3.708544 CCGCCCGGAACCAAGGTA 61.709 66.667 0.73 0.00 37.50 3.08
753 764 2.352457 CGACTCGGGAAGCGATCG 60.352 66.667 11.69 11.69 0.00 3.69
775 787 2.050350 GTGGAGGACGTGATCGGGA 61.050 63.158 0.00 0.00 41.85 5.14
903 924 1.377725 ACAATGCCGCTGAGAAGGG 60.378 57.895 0.00 0.00 0.00 3.95
921 942 1.884075 AAGGTACGCGTGGATGAGCA 61.884 55.000 24.59 0.00 0.00 4.26
922 943 1.153628 AAGGTACGCGTGGATGAGC 60.154 57.895 24.59 11.37 0.00 4.26
1032 1059 0.670854 GGACAGAAGAGTTGGCGTCC 60.671 60.000 0.00 0.00 36.46 4.79
1063 1090 3.502211 CAGTAGCCAAAATTCGTGGAACT 59.498 43.478 11.43 10.14 38.54 3.01
1129 1156 4.098044 TCTCAAATACCAAGGCTACTCGAG 59.902 45.833 11.84 11.84 0.00 4.04
1209 1236 7.093354 CAGCAATAAGTACGTCATATCTCCAT 58.907 38.462 0.00 0.00 0.00 3.41
1299 1328 2.061028 GTTTGCAGCTTTTCATTCCCG 58.939 47.619 0.00 0.00 0.00 5.14
1342 1371 6.759272 ACAGAATAGTACTGAAGCAAGACAA 58.241 36.000 5.39 0.00 38.55 3.18
1541 1613 4.986054 TGGAAGTACTGGTACCATTTGT 57.014 40.909 16.75 12.75 36.75 2.83
1609 1682 5.053145 GCAGGTTATAGTGAGATGGAAGTG 58.947 45.833 0.00 0.00 0.00 3.16
1666 1739 9.639563 TGCACATTAATTTCCTCTCCAATATTA 57.360 29.630 0.00 0.00 0.00 0.98
1768 1841 1.337703 GACAACCAGCACATGAAAGCA 59.662 47.619 0.00 0.00 0.00 3.91
1925 1998 6.376299 TCAGCTGAAGACCGAACTAAACTATA 59.624 38.462 15.67 0.00 0.00 1.31
1974 2047 6.543465 AGCCGATCAATTTCATTCACTGATAA 59.457 34.615 0.00 0.00 32.72 1.75
2019 2092 1.141881 CTGAACGCCGGACTAGCAT 59.858 57.895 5.05 0.00 0.00 3.79
2020 2093 2.571757 CTGAACGCCGGACTAGCA 59.428 61.111 5.05 0.00 0.00 3.49
2031 2104 3.244814 GCATTCACTAGATCAGCTGAACG 59.755 47.826 22.50 11.51 31.51 3.95
2062 2135 4.760530 TTATATCTGAACAGGTGCAGCT 57.239 40.909 13.85 13.85 32.27 4.24
2088 2161 0.601558 TCGGCTGAACACTGGACTAC 59.398 55.000 0.00 0.00 0.00 2.73
2174 2247 9.582648 ACATCACTATTTTTACCCTTGTAAACT 57.417 29.630 0.00 0.00 44.47 2.66
2194 2267 9.935682 CACCTGTAAATCATTTGTATACATCAC 57.064 33.333 6.36 0.00 0.00 3.06
2304 2377 4.987832 TCTCTATGTTCTGTTCGCTCTTC 58.012 43.478 0.00 0.00 0.00 2.87
2490 2563 2.930455 GCACCCATTTTTCCATTCGGTG 60.930 50.000 0.00 0.00 41.77 4.94
2509 2582 1.144708 TCCACTTTCTCCAACATGGCA 59.855 47.619 0.00 0.00 37.47 4.92
2535 2608 1.543802 CACGAGAGCTTCTCCTTCAGT 59.456 52.381 0.00 0.00 40.34 3.41
2661 2746 6.918892 TCTGACTCAAAGTGATTTTCGAAA 57.081 33.333 6.47 6.47 0.00 3.46
2739 2827 3.451894 GCCCTTGCAACCCATCCG 61.452 66.667 0.00 0.00 37.47 4.18
2986 3074 3.257873 CACAAACCTTCATTGTATGCCCA 59.742 43.478 0.00 0.00 38.90 5.36
3265 3373 4.590918 TCCTTCTCTCAGATTCACTACGT 58.409 43.478 0.00 0.00 0.00 3.57
3280 3388 1.000955 TCGTGCTCAAGGTTCCTTCTC 59.999 52.381 0.60 0.00 0.00 2.87
3727 4228 9.421806 CACCAATATAAAAAGAGTGAATTGCAA 57.578 29.630 0.00 0.00 0.00 4.08
4319 7207 2.295909 TCATTGCTTTTCCGTTCCTTGG 59.704 45.455 0.00 0.00 0.00 3.61
4470 7361 4.380655 GCTCGACCAGTTGTAATAGTCTGT 60.381 45.833 0.00 0.00 0.00 3.41
4547 7438 6.034591 TCTTTTGAAAATTTACGTCCGCAAA 58.965 32.000 0.00 0.00 0.00 3.68
4563 7454 5.824624 AGTCACTTCTGCATCTTCTTTTGAA 59.175 36.000 0.00 0.00 36.89 2.69
4625 7516 1.632589 AGGGTGCCATTCTGGTTTTC 58.367 50.000 0.00 0.00 40.46 2.29
4750 7645 3.745723 TCCAAAAGGGAAGTCCAGC 57.254 52.632 0.00 0.00 44.80 4.85
5035 7947 8.161425 AGGTCTAGGCTGAATACAAAGTTAAAA 58.839 33.333 0.00 0.00 0.00 1.52
5036 7948 7.686434 AGGTCTAGGCTGAATACAAAGTTAAA 58.314 34.615 0.00 0.00 0.00 1.52
5093 8010 3.985019 TTAACATAAGGTCCCTCGCAA 57.015 42.857 0.00 0.00 0.00 4.85
5114 8031 4.541973 TCTCAATCAAGAGCAGCTAACA 57.458 40.909 0.00 0.00 35.59 2.41
5403 8320 7.015584 GTCATATGCTTTTAAATGGGAAGGGAT 59.984 37.037 0.00 0.00 0.00 3.85
5408 8325 9.956640 AAAATGTCATATGCTTTTAAATGGGAA 57.043 25.926 0.00 0.00 0.00 3.97
5428 8345 8.421002 ACTTGCCTAACTTAATTGACAAAATGT 58.579 29.630 0.00 0.00 0.00 2.71
5457 8374 2.103263 AGTCCCAGTCAGAGAACACAAC 59.897 50.000 0.00 0.00 0.00 3.32
5481 8398 7.930217 TGGAAATCAACACTTAACAAGAAGAG 58.070 34.615 0.00 0.00 0.00 2.85
5524 8441 6.558775 ACAGCCAAGGTCTAAGATATATCCAA 59.441 38.462 9.18 0.00 0.00 3.53
5539 8456 2.553028 CCTATGTGTCAACAGCCAAGGT 60.553 50.000 0.00 0.00 40.39 3.50
5540 8457 2.086869 CCTATGTGTCAACAGCCAAGG 58.913 52.381 0.00 0.00 40.39 3.61
5574 8491 4.153117 CACACAAGTTCTATGGCTTCAGAC 59.847 45.833 0.00 0.00 0.00 3.51
5653 8570 5.870978 ACTTCATTGCATGGAAATACAAAGC 59.129 36.000 2.94 0.00 0.00 3.51
5660 8578 6.015180 ACACAACTACTTCATTGCATGGAAAT 60.015 34.615 2.94 0.00 0.00 2.17
5667 8585 2.032117 CGCACACAACTACTTCATTGCA 60.032 45.455 0.00 0.00 0.00 4.08
5706 8707 7.114882 TCGAACCAAAAATTGTTTATGCATG 57.885 32.000 10.16 0.00 0.00 4.06
5707 8708 7.721286 TTCGAACCAAAAATTGTTTATGCAT 57.279 28.000 3.79 3.79 0.00 3.96
5712 8713 6.292381 CGGCATTTCGAACCAAAAATTGTTTA 60.292 34.615 0.00 0.00 0.00 2.01
5715 8716 3.492756 CGGCATTTCGAACCAAAAATTGT 59.507 39.130 0.00 0.00 0.00 2.71
5725 8726 2.574212 CAGCGCGGCATTTCGAAC 60.574 61.111 8.83 0.00 0.00 3.95
5727 8728 3.787676 CACAGCGCGGCATTTCGA 61.788 61.111 8.83 0.00 0.00 3.71
5728 8729 3.099619 ATCACAGCGCGGCATTTCG 62.100 57.895 8.83 0.00 0.00 3.46
5729 8730 1.584483 CATCACAGCGCGGCATTTC 60.584 57.895 8.83 0.00 0.00 2.17
5735 8736 3.027170 GAACCACATCACAGCGCGG 62.027 63.158 8.83 5.83 0.00 6.46
5794 8795 3.630769 ACTCCACAAATATGCTGCTGATG 59.369 43.478 0.00 0.00 0.00 3.07
5908 8909 1.813862 GCTCCTACACCAAAGCACACA 60.814 52.381 0.00 0.00 34.86 3.72
5939 8940 0.942962 CCTGAAGCTTCGCATCATCC 59.057 55.000 21.11 0.00 35.74 3.51
5958 8959 3.566322 TCGCCATACTCTTCTCTTAGAGC 59.434 47.826 4.03 0.00 44.45 4.09
5994 8995 2.949106 CAGCGCCTTTGTCACCAG 59.051 61.111 2.29 0.00 0.00 4.00
6282 9286 3.306502 CCCAGCTAAACTCGGACAAGTAA 60.307 47.826 0.00 0.00 0.00 2.24
6346 9365 5.045942 TCAGGCATCATTTACTTACACCTGA 60.046 40.000 3.88 3.88 46.61 3.86
6521 9543 6.104665 AGTTTATTCGCCAGAAAGGTAGTAC 58.895 40.000 0.00 0.00 40.15 2.73
6523 9545 5.161943 AGTTTATTCGCCAGAAAGGTAGT 57.838 39.130 0.00 0.00 40.15 2.73
6524 9546 5.411669 ACAAGTTTATTCGCCAGAAAGGTAG 59.588 40.000 0.00 0.00 40.15 3.18
6525 9547 5.310451 ACAAGTTTATTCGCCAGAAAGGTA 58.690 37.500 0.00 0.00 40.15 3.08
6526 9548 4.142038 ACAAGTTTATTCGCCAGAAAGGT 58.858 39.130 0.00 0.00 40.15 3.50
6626 9648 4.346129 GCAGAGCGATAAGTTCATTTTGG 58.654 43.478 0.00 0.00 31.99 3.28
6670 9692 2.421073 TCCTCTTACGTATGGTGTCGTG 59.579 50.000 8.45 0.00 40.50 4.35
6675 9698 2.100916 CCTGGTCCTCTTACGTATGGTG 59.899 54.545 8.45 2.92 0.00 4.17
6685 9708 1.150135 TGGTCTTCTCCTGGTCCTCTT 59.850 52.381 0.00 0.00 0.00 2.85
6741 9938 3.688159 GTGCGTGTACTCCCCCGT 61.688 66.667 0.00 0.00 0.00 5.28
6747 9944 2.437343 GCTGAGCGTGCGTGTACTC 61.437 63.158 0.00 0.00 0.00 2.59
6750 9947 2.733218 GTGCTGAGCGTGCGTGTA 60.733 61.111 0.00 0.00 0.00 2.90
6751 9948 4.889856 TGTGCTGAGCGTGCGTGT 62.890 61.111 0.00 0.00 0.00 4.49
6761 9958 2.436469 ATGCCGCGAATGTGCTGA 60.436 55.556 8.23 0.00 0.00 4.26
6766 9963 4.802051 AGGGCATGCCGCGAATGT 62.802 61.111 29.90 5.72 43.84 2.71
6802 9999 1.123928 CTAGGACTGGGCCTAACAGG 58.876 60.000 4.53 0.00 39.91 4.00
6803 10000 0.466124 GCTAGGACTGGGCCTAACAG 59.534 60.000 4.53 4.00 39.91 3.16
6804 10001 0.042731 AGCTAGGACTGGGCCTAACA 59.957 55.000 4.53 0.00 39.91 2.41
6805 10002 0.753867 GAGCTAGGACTGGGCCTAAC 59.246 60.000 4.53 0.00 39.91 2.34
6806 10003 0.398664 GGAGCTAGGACTGGGCCTAA 60.399 60.000 4.53 0.00 39.91 2.69
6807 10004 1.233369 GGAGCTAGGACTGGGCCTA 59.767 63.158 4.53 1.90 39.50 3.93
6808 10005 2.041405 GGAGCTAGGACTGGGCCT 60.041 66.667 4.53 0.00 42.15 5.19
6809 10006 2.041405 AGGAGCTAGGACTGGGCC 60.041 66.667 0.00 0.00 0.00 5.80
6810 10007 2.137528 GGAGGAGCTAGGACTGGGC 61.138 68.421 0.00 0.00 0.00 5.36
6811 10008 1.045911 GTGGAGGAGCTAGGACTGGG 61.046 65.000 0.00 0.00 0.00 4.45
6812 10009 0.032615 AGTGGAGGAGCTAGGACTGG 60.033 60.000 0.00 0.00 0.00 4.00
6813 10010 1.110442 CAGTGGAGGAGCTAGGACTG 58.890 60.000 0.00 0.00 0.00 3.51
6814 10011 0.707616 ACAGTGGAGGAGCTAGGACT 59.292 55.000 0.00 0.00 0.00 3.85
6815 10012 1.478916 GAACAGTGGAGGAGCTAGGAC 59.521 57.143 0.00 0.00 0.00 3.85
6816 10013 1.619977 GGAACAGTGGAGGAGCTAGGA 60.620 57.143 0.00 0.00 0.00 2.94
6817 10014 0.827368 GGAACAGTGGAGGAGCTAGG 59.173 60.000 0.00 0.00 0.00 3.02
6818 10015 1.480137 CAGGAACAGTGGAGGAGCTAG 59.520 57.143 0.00 0.00 0.00 3.42
6819 10016 1.203187 ACAGGAACAGTGGAGGAGCTA 60.203 52.381 0.00 0.00 0.00 3.32
6820 10017 0.472734 ACAGGAACAGTGGAGGAGCT 60.473 55.000 0.00 0.00 0.00 4.09
6821 10018 0.321122 CACAGGAACAGTGGAGGAGC 60.321 60.000 0.00 0.00 42.33 4.70
6822 10019 3.923354 CACAGGAACAGTGGAGGAG 57.077 57.895 0.00 0.00 42.33 3.69
6829 10026 2.591715 GCGGCACACAGGAACAGT 60.592 61.111 0.00 0.00 0.00 3.55
6830 10027 2.281070 AGCGGCACACAGGAACAG 60.281 61.111 1.45 0.00 0.00 3.16
6831 10028 2.591429 CAGCGGCACACAGGAACA 60.591 61.111 1.45 0.00 0.00 3.18
6832 10029 3.357079 CCAGCGGCACACAGGAAC 61.357 66.667 1.45 0.00 0.00 3.62
6833 10030 4.641645 CCCAGCGGCACACAGGAA 62.642 66.667 1.45 0.00 0.00 3.36
6835 10032 3.925630 AATCCCAGCGGCACACAGG 62.926 63.158 1.45 0.00 0.00 4.00
6836 10033 1.926511 GAAATCCCAGCGGCACACAG 61.927 60.000 1.45 0.00 0.00 3.66
6837 10034 1.971167 GAAATCCCAGCGGCACACA 60.971 57.895 1.45 0.00 0.00 3.72
6838 10035 1.675641 AGAAATCCCAGCGGCACAC 60.676 57.895 1.45 0.00 0.00 3.82
6839 10036 1.675310 CAGAAATCCCAGCGGCACA 60.675 57.895 1.45 0.00 0.00 4.57
6840 10037 1.244019 AACAGAAATCCCAGCGGCAC 61.244 55.000 1.45 0.00 0.00 5.01
6841 10038 0.960364 GAACAGAAATCCCAGCGGCA 60.960 55.000 1.45 0.00 0.00 5.69
6842 10039 1.803289 GAACAGAAATCCCAGCGGC 59.197 57.895 0.00 0.00 0.00 6.53
6843 10040 0.673644 ACGAACAGAAATCCCAGCGG 60.674 55.000 0.00 0.00 0.00 5.52
6844 10041 0.721718 GACGAACAGAAATCCCAGCG 59.278 55.000 0.00 0.00 0.00 5.18
6845 10042 0.721718 CGACGAACAGAAATCCCAGC 59.278 55.000 0.00 0.00 0.00 4.85
6846 10043 2.363788 TCGACGAACAGAAATCCCAG 57.636 50.000 0.00 0.00 0.00 4.45
6847 10044 2.734175 CGATCGACGAACAGAAATCCCA 60.734 50.000 10.26 0.00 45.77 4.37
6848 10045 1.852895 CGATCGACGAACAGAAATCCC 59.147 52.381 10.26 0.00 45.77 3.85
6849 10046 1.255600 GCGATCGACGAACAGAAATCC 59.744 52.381 21.57 0.00 45.77 3.01
6850 10047 1.255600 GGCGATCGACGAACAGAAATC 59.744 52.381 21.57 0.00 45.77 2.17
6851 10048 1.278238 GGCGATCGACGAACAGAAAT 58.722 50.000 21.57 0.00 45.77 2.17
6852 10049 0.734942 GGGCGATCGACGAACAGAAA 60.735 55.000 21.57 0.00 45.77 2.52
6853 10050 1.153901 GGGCGATCGACGAACAGAA 60.154 57.895 21.57 0.00 45.77 3.02
6854 10051 1.663379 ATGGGCGATCGACGAACAGA 61.663 55.000 21.57 0.00 45.77 3.41
6855 10052 1.209275 GATGGGCGATCGACGAACAG 61.209 60.000 21.57 0.00 45.77 3.16
6856 10053 1.226859 GATGGGCGATCGACGAACA 60.227 57.895 21.57 10.41 45.77 3.18
6857 10054 0.309922 TAGATGGGCGATCGACGAAC 59.690 55.000 21.57 12.85 45.77 3.95
6858 10055 1.026584 TTAGATGGGCGATCGACGAA 58.973 50.000 21.57 8.60 45.77 3.85
6859 10056 0.309922 GTTAGATGGGCGATCGACGA 59.690 55.000 21.57 15.26 45.77 4.20
6860 10057 0.997226 CGTTAGATGGGCGATCGACG 60.997 60.000 21.57 19.91 45.66 5.12
6861 10058 0.663568 CCGTTAGATGGGCGATCGAC 60.664 60.000 21.57 18.00 36.04 4.20
6862 10059 1.658114 CCGTTAGATGGGCGATCGA 59.342 57.895 21.57 0.00 36.04 3.59
6863 10060 2.022129 GCCGTTAGATGGGCGATCG 61.022 63.158 11.69 11.69 39.93 3.69
6864 10061 3.952811 GCCGTTAGATGGGCGATC 58.047 61.111 0.65 0.65 39.93 3.69
6869 10066 1.942657 CAATGTGAGCCGTTAGATGGG 59.057 52.381 0.00 0.00 0.00 4.00
6870 10067 1.942657 CCAATGTGAGCCGTTAGATGG 59.057 52.381 0.00 0.00 0.00 3.51
6871 10068 2.868583 CTCCAATGTGAGCCGTTAGATG 59.131 50.000 0.00 0.00 0.00 2.90
6872 10069 2.158900 CCTCCAATGTGAGCCGTTAGAT 60.159 50.000 0.00 0.00 0.00 1.98
6873 10070 1.207089 CCTCCAATGTGAGCCGTTAGA 59.793 52.381 0.00 0.00 0.00 2.10
6874 10071 1.207089 TCCTCCAATGTGAGCCGTTAG 59.793 52.381 0.00 0.00 0.00 2.34
6875 10072 1.271856 TCCTCCAATGTGAGCCGTTA 58.728 50.000 0.00 0.00 0.00 3.18
6876 10073 0.620556 ATCCTCCAATGTGAGCCGTT 59.379 50.000 0.00 0.00 0.00 4.44
6877 10074 1.139058 GTATCCTCCAATGTGAGCCGT 59.861 52.381 0.00 0.00 0.00 5.68
6878 10075 1.541233 GGTATCCTCCAATGTGAGCCG 60.541 57.143 0.00 0.00 0.00 5.52
6879 10076 1.541233 CGGTATCCTCCAATGTGAGCC 60.541 57.143 0.00 0.00 0.00 4.70
6880 10077 1.541233 CCGGTATCCTCCAATGTGAGC 60.541 57.143 0.00 0.00 0.00 4.26
6881 10078 1.762957 ACCGGTATCCTCCAATGTGAG 59.237 52.381 4.49 0.00 0.00 3.51
6882 10079 1.874129 ACCGGTATCCTCCAATGTGA 58.126 50.000 4.49 0.00 0.00 3.58
6883 10080 2.561569 GAACCGGTATCCTCCAATGTG 58.438 52.381 8.00 0.00 0.00 3.21
6884 10081 1.138266 CGAACCGGTATCCTCCAATGT 59.862 52.381 8.00 0.00 0.00 2.71
6885 10082 1.865865 CGAACCGGTATCCTCCAATG 58.134 55.000 8.00 0.00 0.00 2.82
6886 10083 0.106149 GCGAACCGGTATCCTCCAAT 59.894 55.000 8.00 0.00 0.00 3.16
6887 10084 0.974010 AGCGAACCGGTATCCTCCAA 60.974 55.000 8.00 0.00 35.27 3.53
6888 10085 0.106569 TAGCGAACCGGTATCCTCCA 60.107 55.000 8.00 0.00 38.83 3.86
6889 10086 0.597072 CTAGCGAACCGGTATCCTCC 59.403 60.000 8.00 0.00 39.07 4.30
6890 10087 0.039346 GCTAGCGAACCGGTATCCTC 60.039 60.000 8.00 0.00 39.07 3.71
6891 10088 0.754217 TGCTAGCGAACCGGTATCCT 60.754 55.000 8.00 6.79 39.07 3.24
6892 10089 0.317479 ATGCTAGCGAACCGGTATCC 59.683 55.000 8.00 0.00 39.07 2.59
6893 10090 1.419374 CATGCTAGCGAACCGGTATC 58.581 55.000 8.00 7.14 39.07 2.24
6894 10091 0.033504 CCATGCTAGCGAACCGGTAT 59.966 55.000 8.00 0.00 39.07 2.73
6895 10092 1.038681 TCCATGCTAGCGAACCGGTA 61.039 55.000 8.00 0.00 38.83 4.02
6896 10093 2.186903 CCATGCTAGCGAACCGGT 59.813 61.111 10.77 0.00 41.50 5.28
6897 10094 1.883084 GTCCATGCTAGCGAACCGG 60.883 63.158 10.77 0.00 0.00 5.28
6898 10095 2.230940 CGTCCATGCTAGCGAACCG 61.231 63.158 10.77 4.79 0.00 4.44
6899 10096 0.249489 ATCGTCCATGCTAGCGAACC 60.249 55.000 10.77 0.00 36.92 3.62
6900 10097 1.132588 GATCGTCCATGCTAGCGAAC 58.867 55.000 10.77 4.50 36.92 3.95
6901 10098 1.001268 GAGATCGTCCATGCTAGCGAA 60.001 52.381 10.77 0.00 36.92 4.70
6902 10099 0.593618 GAGATCGTCCATGCTAGCGA 59.406 55.000 10.77 0.00 37.76 4.93
6903 10100 0.387878 GGAGATCGTCCATGCTAGCG 60.388 60.000 10.77 0.00 46.10 4.26
6904 10101 3.505808 GGAGATCGTCCATGCTAGC 57.494 57.895 8.10 8.10 46.10 3.42
6913 10110 3.070159 TCAAGGAATGGATGGAGATCGTC 59.930 47.826 0.00 0.00 0.00 4.20
6914 10111 3.041211 TCAAGGAATGGATGGAGATCGT 58.959 45.455 0.00 0.00 0.00 3.73
6915 10112 3.758755 TCAAGGAATGGATGGAGATCG 57.241 47.619 0.00 0.00 0.00 3.69
6916 10113 5.301835 TCTTCAAGGAATGGATGGAGATC 57.698 43.478 0.00 0.00 0.00 2.75
6917 10114 5.222089 GGATCTTCAAGGAATGGATGGAGAT 60.222 44.000 0.00 0.00 0.00 2.75
6918 10115 4.103785 GGATCTTCAAGGAATGGATGGAGA 59.896 45.833 0.00 0.00 0.00 3.71
6919 10116 4.141321 TGGATCTTCAAGGAATGGATGGAG 60.141 45.833 0.00 0.00 0.00 3.86
6920 10117 3.787577 TGGATCTTCAAGGAATGGATGGA 59.212 43.478 0.00 0.00 0.00 3.41
6921 10118 4.174704 TGGATCTTCAAGGAATGGATGG 57.825 45.455 0.00 0.00 0.00 3.51
6922 10119 4.951715 TGTTGGATCTTCAAGGAATGGATG 59.048 41.667 0.00 0.00 0.00 3.51
6923 10120 5.197224 TGTTGGATCTTCAAGGAATGGAT 57.803 39.130 0.00 0.00 0.00 3.41
6924 10121 4.592942 CTGTTGGATCTTCAAGGAATGGA 58.407 43.478 0.00 0.00 0.00 3.41
6925 10122 3.129988 GCTGTTGGATCTTCAAGGAATGG 59.870 47.826 0.00 0.00 0.00 3.16
6926 10123 4.015084 AGCTGTTGGATCTTCAAGGAATG 58.985 43.478 0.00 0.00 0.00 2.67
6927 10124 4.313020 AGCTGTTGGATCTTCAAGGAAT 57.687 40.909 0.00 0.00 0.00 3.01
6928 10125 3.795688 AGCTGTTGGATCTTCAAGGAA 57.204 42.857 0.00 0.00 0.00 3.36
6929 10126 4.384537 CCATAGCTGTTGGATCTTCAAGGA 60.385 45.833 11.15 0.00 36.26 3.36
6930 10127 3.881688 CCATAGCTGTTGGATCTTCAAGG 59.118 47.826 11.15 0.00 36.26 3.61
6931 10128 4.774124 TCCATAGCTGTTGGATCTTCAAG 58.226 43.478 14.41 0.00 38.35 3.02
6932 10129 4.842531 TCCATAGCTGTTGGATCTTCAA 57.157 40.909 14.41 0.00 38.35 2.69
6933 10130 4.471025 TCTTCCATAGCTGTTGGATCTTCA 59.529 41.667 17.94 5.26 42.69 3.02
6934 10131 4.813697 GTCTTCCATAGCTGTTGGATCTTC 59.186 45.833 17.94 8.18 42.69 2.87
6935 10132 4.384647 GGTCTTCCATAGCTGTTGGATCTT 60.385 45.833 17.94 0.00 42.69 2.40
6936 10133 3.135530 GGTCTTCCATAGCTGTTGGATCT 59.864 47.826 17.94 0.00 42.69 2.75
6937 10134 3.471680 GGTCTTCCATAGCTGTTGGATC 58.528 50.000 17.94 12.33 42.69 3.36
6938 10135 2.173569 GGGTCTTCCATAGCTGTTGGAT 59.826 50.000 17.94 0.00 42.69 3.41
6939 10136 1.559682 GGGTCTTCCATAGCTGTTGGA 59.440 52.381 14.41 14.41 41.50 3.53
6940 10137 1.281867 TGGGTCTTCCATAGCTGTTGG 59.718 52.381 10.50 10.50 41.46 3.77
6941 10138 2.787473 TGGGTCTTCCATAGCTGTTG 57.213 50.000 0.00 0.00 41.46 3.33
6942 10139 2.619074 GCTTGGGTCTTCCATAGCTGTT 60.619 50.000 0.00 0.00 46.52 3.16
6943 10140 1.065126 GCTTGGGTCTTCCATAGCTGT 60.065 52.381 0.00 0.00 46.52 4.40
6944 10141 1.065199 TGCTTGGGTCTTCCATAGCTG 60.065 52.381 0.00 0.00 46.52 4.24
6945 10142 1.289160 TGCTTGGGTCTTCCATAGCT 58.711 50.000 14.95 0.00 46.52 3.32
6946 10143 2.225467 GATGCTTGGGTCTTCCATAGC 58.775 52.381 10.21 10.21 46.52 2.97
6947 10144 2.487934 CGATGCTTGGGTCTTCCATAG 58.512 52.381 0.00 0.00 46.52 2.23
6948 10145 1.475034 GCGATGCTTGGGTCTTCCATA 60.475 52.381 0.00 0.00 46.52 2.74
6949 10146 0.749454 GCGATGCTTGGGTCTTCCAT 60.749 55.000 0.00 0.00 46.52 3.41
6950 10147 1.377202 GCGATGCTTGGGTCTTCCA 60.377 57.895 0.00 0.00 45.43 3.53
6951 10148 0.178068 TAGCGATGCTTGGGTCTTCC 59.822 55.000 0.00 0.00 40.44 3.46
6952 10149 2.246719 ATAGCGATGCTTGGGTCTTC 57.753 50.000 0.00 0.00 40.44 2.87
6953 10150 2.548920 GCTATAGCGATGCTTGGGTCTT 60.549 50.000 9.40 0.00 40.44 3.01
6954 10151 1.001406 GCTATAGCGATGCTTGGGTCT 59.999 52.381 9.40 0.00 40.44 3.85
6955 10152 1.433534 GCTATAGCGATGCTTGGGTC 58.566 55.000 9.40 0.00 40.44 4.46
6956 10153 2.158755 AAAGCTATAGCGATGCTTGGGT 60.159 45.455 18.82 0.00 44.94 4.51
6957 10154 2.498167 AAAGCTATAGCGATGCTTGGG 58.502 47.619 18.82 0.00 44.94 4.12
6958 10155 3.058639 GGAAAAGCTATAGCGATGCTTGG 60.059 47.826 18.82 0.00 44.94 3.61
6959 10156 3.363378 CGGAAAAGCTATAGCGATGCTTG 60.363 47.826 18.82 4.50 44.94 4.01
6963 10160 7.513795 GCTTGTCGGAAAAGCTATAGCGATG 62.514 48.000 22.71 7.45 45.31 3.84
6964 10161 5.557386 GCTTGTCGGAAAAGCTATAGCGAT 61.557 45.833 22.71 9.51 45.31 4.58
6965 10162 4.283432 GCTTGTCGGAAAAGCTATAGCGA 61.283 47.826 22.71 6.38 45.31 4.93
6966 10163 2.033662 GCTTGTCGGAAAAGCTATAGCG 60.034 50.000 22.71 3.98 45.31 4.26
6967 10164 3.594044 GCTTGTCGGAAAAGCTATAGC 57.406 47.619 22.71 17.33 45.31 2.97
6968 10165 4.024556 CATGGCTTGTCGGAAAAGCTATAG 60.025 45.833 25.51 17.66 46.36 1.31
6969 10166 3.876914 CATGGCTTGTCGGAAAAGCTATA 59.123 43.478 25.51 15.99 46.36 1.31
6974 10171 1.666888 GCACATGGCTTGTCGGAAAAG 60.667 52.381 3.44 3.44 36.00 2.27
6975 10172 0.313672 GCACATGGCTTGTCGGAAAA 59.686 50.000 2.62 0.00 36.00 2.29
6976 10173 1.956043 GCACATGGCTTGTCGGAAA 59.044 52.632 2.62 0.00 36.00 3.13
6977 10174 3.667087 GCACATGGCTTGTCGGAA 58.333 55.556 2.62 0.00 36.00 4.30
6986 10183 1.457346 AGTAAAGCAGAGCACATGGC 58.543 50.000 0.00 0.00 45.30 4.40
6987 10184 3.755378 AGAAAGTAAAGCAGAGCACATGG 59.245 43.478 0.00 0.00 0.00 3.66
6988 10185 5.180868 AGAAGAAAGTAAAGCAGAGCACATG 59.819 40.000 0.00 0.00 0.00 3.21
6989 10186 5.312079 AGAAGAAAGTAAAGCAGAGCACAT 58.688 37.500 0.00 0.00 0.00 3.21
6990 10187 4.708177 AGAAGAAAGTAAAGCAGAGCACA 58.292 39.130 0.00 0.00 0.00 4.57
6991 10188 5.468409 AGAAGAAGAAAGTAAAGCAGAGCAC 59.532 40.000 0.00 0.00 0.00 4.40
6992 10189 5.615289 AGAAGAAGAAAGTAAAGCAGAGCA 58.385 37.500 0.00 0.00 0.00 4.26
6993 10190 6.552859 AAGAAGAAGAAAGTAAAGCAGAGC 57.447 37.500 0.00 0.00 0.00 4.09
6994 10191 9.444534 GAAAAAGAAGAAGAAAGTAAAGCAGAG 57.555 33.333 0.00 0.00 0.00 3.35
6995 10192 8.956426 TGAAAAAGAAGAAGAAAGTAAAGCAGA 58.044 29.630 0.00 0.00 0.00 4.26
6996 10193 9.014533 GTGAAAAAGAAGAAGAAAGTAAAGCAG 57.985 33.333 0.00 0.00 0.00 4.24
6997 10194 8.739972 AGTGAAAAAGAAGAAGAAAGTAAAGCA 58.260 29.630 0.00 0.00 0.00 3.91
6998 10195 9.227490 GAGTGAAAAAGAAGAAGAAAGTAAAGC 57.773 33.333 0.00 0.00 0.00 3.51
6999 10196 9.427127 CGAGTGAAAAAGAAGAAGAAAGTAAAG 57.573 33.333 0.00 0.00 0.00 1.85
7000 10197 9.158233 TCGAGTGAAAAAGAAGAAGAAAGTAAA 57.842 29.630 0.00 0.00 0.00 2.01
7001 10198 8.712285 TCGAGTGAAAAAGAAGAAGAAAGTAA 57.288 30.769 0.00 0.00 0.00 2.24
7002 10199 8.765219 CATCGAGTGAAAAAGAAGAAGAAAGTA 58.235 33.333 0.00 0.00 0.00 2.24
7003 10200 7.281100 ACATCGAGTGAAAAAGAAGAAGAAAGT 59.719 33.333 0.00 0.00 0.00 2.66
7004 10201 7.634522 ACATCGAGTGAAAAAGAAGAAGAAAG 58.365 34.615 0.00 0.00 0.00 2.62
7005 10202 7.553881 ACATCGAGTGAAAAAGAAGAAGAAA 57.446 32.000 0.00 0.00 0.00 2.52
7006 10203 8.657074 TTACATCGAGTGAAAAAGAAGAAGAA 57.343 30.769 0.00 0.00 0.00 2.52
7007 10204 8.712363 CATTACATCGAGTGAAAAAGAAGAAGA 58.288 33.333 0.00 0.00 0.00 2.87
7008 10205 7.959651 CCATTACATCGAGTGAAAAAGAAGAAG 59.040 37.037 0.00 0.00 0.00 2.85
7009 10206 7.573096 GCCATTACATCGAGTGAAAAAGAAGAA 60.573 37.037 0.00 0.00 0.00 2.52
7010 10207 6.128282 GCCATTACATCGAGTGAAAAAGAAGA 60.128 38.462 0.00 0.00 0.00 2.87
7011 10208 6.024049 GCCATTACATCGAGTGAAAAAGAAG 58.976 40.000 0.00 0.00 0.00 2.85
7012 10209 5.705441 AGCCATTACATCGAGTGAAAAAGAA 59.295 36.000 0.00 0.00 0.00 2.52
7013 10210 5.245531 AGCCATTACATCGAGTGAAAAAGA 58.754 37.500 0.00 0.00 0.00 2.52
7014 10211 5.352569 AGAGCCATTACATCGAGTGAAAAAG 59.647 40.000 0.00 0.00 0.00 2.27
7015 10212 5.245531 AGAGCCATTACATCGAGTGAAAAA 58.754 37.500 0.00 0.00 0.00 1.94
7016 10213 4.832248 AGAGCCATTACATCGAGTGAAAA 58.168 39.130 0.00 0.00 0.00 2.29
7017 10214 4.471904 AGAGCCATTACATCGAGTGAAA 57.528 40.909 0.00 0.00 0.00 2.69
7018 10215 5.592104 TTAGAGCCATTACATCGAGTGAA 57.408 39.130 0.00 0.00 0.00 3.18
7019 10216 5.592054 CTTTAGAGCCATTACATCGAGTGA 58.408 41.667 0.00 0.00 0.00 3.41
7020 10217 4.210120 GCTTTAGAGCCATTACATCGAGTG 59.790 45.833 0.00 0.00 43.29 3.51
7021 10218 4.372656 GCTTTAGAGCCATTACATCGAGT 58.627 43.478 0.00 0.00 43.29 4.18
7022 10219 4.981389 GCTTTAGAGCCATTACATCGAG 57.019 45.455 0.00 0.00 43.29 4.04
7035 10232 0.467804 GGAGGAGGCTGGCTTTAGAG 59.532 60.000 4.82 0.00 0.00 2.43
7036 10233 0.983378 GGGAGGAGGCTGGCTTTAGA 60.983 60.000 4.82 0.00 0.00 2.10
7037 10234 0.985490 AGGGAGGAGGCTGGCTTTAG 60.985 60.000 4.82 0.00 0.00 1.85
7038 10235 0.983378 GAGGGAGGAGGCTGGCTTTA 60.983 60.000 4.82 0.00 0.00 1.85
7039 10236 2.204213 AGGGAGGAGGCTGGCTTT 60.204 61.111 4.82 0.00 0.00 3.51
7040 10237 2.690510 GAGGGAGGAGGCTGGCTT 60.691 66.667 4.82 0.00 0.00 4.35
7041 10238 2.854420 AATGAGGGAGGAGGCTGGCT 62.854 60.000 2.24 2.24 0.00 4.75
7042 10239 2.336484 GAATGAGGGAGGAGGCTGGC 62.336 65.000 0.00 0.00 0.00 4.85
7043 10240 0.693767 AGAATGAGGGAGGAGGCTGG 60.694 60.000 0.00 0.00 0.00 4.85
7044 10241 0.469070 CAGAATGAGGGAGGAGGCTG 59.531 60.000 0.00 0.00 39.69 4.85
7045 10242 0.693767 CCAGAATGAGGGAGGAGGCT 60.694 60.000 0.00 0.00 39.69 4.58
7046 10243 0.692419 TCCAGAATGAGGGAGGAGGC 60.692 60.000 0.00 0.00 39.69 4.70
7047 10244 1.127343 GTCCAGAATGAGGGAGGAGG 58.873 60.000 0.00 0.00 39.69 4.30
7048 10245 2.173126 AGTCCAGAATGAGGGAGGAG 57.827 55.000 0.00 0.00 39.69 3.69
7049 10246 3.051803 ACATAGTCCAGAATGAGGGAGGA 60.052 47.826 0.00 0.00 39.69 3.71
7050 10247 3.312890 ACATAGTCCAGAATGAGGGAGG 58.687 50.000 0.00 0.00 39.69 4.30
7051 10248 4.406972 TCAACATAGTCCAGAATGAGGGAG 59.593 45.833 0.00 0.00 39.69 4.30
7052 10249 4.361783 TCAACATAGTCCAGAATGAGGGA 58.638 43.478 0.00 0.00 39.69 4.20
7053 10250 4.760530 TCAACATAGTCCAGAATGAGGG 57.239 45.455 0.00 0.00 39.69 4.30
7054 10251 8.781196 CATAATTCAACATAGTCCAGAATGAGG 58.219 37.037 0.00 0.00 39.69 3.86
7055 10252 9.334947 ACATAATTCAACATAGTCCAGAATGAG 57.665 33.333 0.00 0.00 39.69 2.90
7056 10253 9.685276 AACATAATTCAACATAGTCCAGAATGA 57.315 29.630 0.00 0.00 39.69 2.57
7057 10254 9.726232 CAACATAATTCAACATAGTCCAGAATG 57.274 33.333 0.00 0.00 0.00 2.67
7058 10255 8.906867 CCAACATAATTCAACATAGTCCAGAAT 58.093 33.333 0.00 0.00 0.00 2.40
7059 10256 7.339212 CCCAACATAATTCAACATAGTCCAGAA 59.661 37.037 0.00 0.00 0.00 3.02
7060 10257 6.828273 CCCAACATAATTCAACATAGTCCAGA 59.172 38.462 0.00 0.00 0.00 3.86
7061 10258 6.603201 ACCCAACATAATTCAACATAGTCCAG 59.397 38.462 0.00 0.00 0.00 3.86
7062 10259 6.489603 ACCCAACATAATTCAACATAGTCCA 58.510 36.000 0.00 0.00 0.00 4.02
7063 10260 7.093945 ACAACCCAACATAATTCAACATAGTCC 60.094 37.037 0.00 0.00 0.00 3.85
7064 10261 7.826690 ACAACCCAACATAATTCAACATAGTC 58.173 34.615 0.00 0.00 0.00 2.59
7065 10262 7.775053 ACAACCCAACATAATTCAACATAGT 57.225 32.000 0.00 0.00 0.00 2.12
7067 10264 9.915629 GTTTACAACCCAACATAATTCAACATA 57.084 29.630 0.00 0.00 0.00 2.29
7068 10265 7.875554 GGTTTACAACCCAACATAATTCAACAT 59.124 33.333 0.00 0.00 46.12 2.71
7069 10266 7.210873 GGTTTACAACCCAACATAATTCAACA 58.789 34.615 0.00 0.00 46.12 3.33
7070 10267 7.646446 GGTTTACAACCCAACATAATTCAAC 57.354 36.000 0.00 0.00 46.12 3.18
7085 10282 2.224695 ACTGGTGGCTAGGGTTTACAAC 60.225 50.000 0.00 0.00 0.00 3.32
7086 10283 2.059490 ACTGGTGGCTAGGGTTTACAA 58.941 47.619 0.00 0.00 0.00 2.41
7087 10284 1.349688 CACTGGTGGCTAGGGTTTACA 59.650 52.381 0.00 0.00 0.00 2.41
7088 10285 1.339727 CCACTGGTGGCTAGGGTTTAC 60.340 57.143 6.84 0.00 44.73 2.01
7089 10286 0.988832 CCACTGGTGGCTAGGGTTTA 59.011 55.000 6.84 0.00 44.73 2.01
7090 10287 1.767692 CCACTGGTGGCTAGGGTTT 59.232 57.895 6.84 0.00 44.73 3.27
7091 10288 3.495729 CCACTGGTGGCTAGGGTT 58.504 61.111 6.84 0.00 44.73 4.11
7100 10297 0.320771 AGTTTAGCTCGCCACTGGTG 60.321 55.000 1.76 1.76 33.99 4.17
7101 10298 1.067071 GTAGTTTAGCTCGCCACTGGT 60.067 52.381 0.00 0.00 0.00 4.00
7102 10299 1.204941 AGTAGTTTAGCTCGCCACTGG 59.795 52.381 0.00 0.00 0.00 4.00
7103 10300 2.656560 AGTAGTTTAGCTCGCCACTG 57.343 50.000 0.00 0.00 0.00 3.66
7104 10301 3.586892 GAAAGTAGTTTAGCTCGCCACT 58.413 45.455 0.00 0.00 0.00 4.00
7105 10302 2.671888 GGAAAGTAGTTTAGCTCGCCAC 59.328 50.000 0.00 0.00 0.00 5.01
7106 10303 2.354403 GGGAAAGTAGTTTAGCTCGCCA 60.354 50.000 0.00 0.00 0.00 5.69
7107 10304 2.277969 GGGAAAGTAGTTTAGCTCGCC 58.722 52.381 0.00 0.00 0.00 5.54
7108 10305 2.968675 TGGGAAAGTAGTTTAGCTCGC 58.031 47.619 0.00 0.00 0.00 5.03
7109 10306 5.292101 CAGAATGGGAAAGTAGTTTAGCTCG 59.708 44.000 0.00 0.00 0.00 5.03
7110 10307 6.670077 CAGAATGGGAAAGTAGTTTAGCTC 57.330 41.667 0.00 0.00 0.00 4.09
7127 10324 4.911390 ACTAGGGTTTCTTCACCAGAATG 58.089 43.478 0.00 0.00 41.42 2.67
7128 10325 5.515008 GGAACTAGGGTTTCTTCACCAGAAT 60.515 44.000 0.00 0.00 41.42 2.40
7129 10326 4.202430 GGAACTAGGGTTTCTTCACCAGAA 60.202 45.833 0.00 0.00 39.99 3.02
7130 10327 3.326880 GGAACTAGGGTTTCTTCACCAGA 59.673 47.826 0.00 0.00 38.79 3.86
7131 10328 3.676093 GGAACTAGGGTTTCTTCACCAG 58.324 50.000 0.00 0.00 38.79 4.00
7132 10329 3.782656 GGAACTAGGGTTTCTTCACCA 57.217 47.619 0.00 0.00 38.79 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.