Multiple sequence alignment - TraesCS3B01G250200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G250200 chr3B 100.000 5889 0 0 1 5889 399503036 399508924 0.000000e+00 10876.0
1 TraesCS3B01G250200 chr3B 94.681 282 12 3 5609 5889 720975854 720976133 9.060000e-118 435.0
2 TraesCS3B01G250200 chr3A 95.175 3316 113 22 701 4003 405500386 405503667 0.000000e+00 5193.0
3 TraesCS3B01G250200 chr3A 96.157 1067 35 5 4508 5571 405504232 405505295 0.000000e+00 1738.0
4 TraesCS3B01G250200 chr3A 98.485 462 7 0 4000 4461 405503769 405504230 0.000000e+00 815.0
5 TraesCS3B01G250200 chr3A 93.141 277 17 2 426 701 693182188 693182463 7.110000e-109 405.0
6 TraesCS3B01G250200 chr3A 92.884 267 13 4 171 432 405500128 405500393 3.330000e-102 383.0
7 TraesCS3B01G250200 chr3A 87.324 71 9 0 5180 5250 383706172 383706102 1.360000e-11 82.4
8 TraesCS3B01G250200 chr3D 95.880 1699 64 5 960 2655 320638887 320637192 0.000000e+00 2745.0
9 TraesCS3B01G250200 chr3D 94.439 1079 36 14 2671 3748 320637143 320636088 0.000000e+00 1639.0
10 TraesCS3B01G250200 chr3D 95.958 866 31 4 4508 5370 320635160 320634296 0.000000e+00 1402.0
11 TraesCS3B01G250200 chr3D 97.262 767 12 5 3746 4507 320636005 320635243 0.000000e+00 1291.0
12 TraesCS3B01G250200 chr3D 96.000 425 15 2 1 425 320639819 320639397 0.000000e+00 689.0
13 TraesCS3B01G250200 chr3D 94.886 176 7 2 701 876 320639391 320639218 2.090000e-69 274.0
14 TraesCS3B01G250200 chr3D 98.182 55 1 0 2687 2741 320637192 320637138 4.860000e-16 97.1
15 TraesCS3B01G250200 chr3D 95.556 45 2 0 5192 5236 290871491 290871447 8.190000e-09 73.1
16 TraesCS3B01G250200 chr1B 95.423 284 12 1 5607 5889 478705104 478704821 9.000000e-123 451.0
17 TraesCS3B01G250200 chr1B 93.772 289 16 2 5602 5889 307389517 307389230 3.260000e-117 433.0
18 TraesCS3B01G250200 chr4B 95.374 281 12 1 5610 5889 500045346 500045626 4.190000e-121 446.0
19 TraesCS3B01G250200 chr4B 86.154 65 5 4 5120 5183 601381950 601382011 3.810000e-07 67.6
20 TraesCS3B01G250200 chr7B 95.035 282 13 1 5609 5889 629006122 629005841 5.420000e-120 442.0
21 TraesCS3B01G250200 chr7B 94.718 284 12 1 5609 5889 649207092 649206809 7.010000e-119 438.0
22 TraesCS3B01G250200 chr7B 94.245 278 15 1 425 701 12830991 12831268 1.960000e-114 424.0
23 TraesCS3B01G250200 chr7B 86.822 129 15 2 5130 5256 327272932 327273060 6.150000e-30 143.0
24 TraesCS3B01G250200 chr2B 94.700 283 14 1 5608 5889 358044498 358044216 7.010000e-119 438.0
25 TraesCS3B01G250200 chr2B 86.111 72 10 0 1205 1276 144078304 144078233 1.760000e-10 78.7
26 TraesCS3B01G250200 chrUn 94.346 283 12 2 5611 5889 78832493 78832211 1.170000e-116 431.0
27 TraesCS3B01G250200 chrUn 84.375 128 17 3 5130 5255 52974602 52974728 8.010000e-24 122.0
28 TraesCS3B01G250200 chr5A 94.624 279 14 1 424 701 94362114 94362392 1.170000e-116 431.0
29 TraesCS3B01G250200 chr6B 93.471 291 14 3 5603 5889 161584505 161584216 1.520000e-115 427.0
30 TraesCS3B01G250200 chr2A 93.863 277 16 1 429 704 594484339 594484063 3.280000e-112 416.0
31 TraesCS3B01G250200 chr4A 93.502 277 17 1 426 701 617068458 617068182 1.530000e-110 411.0
32 TraesCS3B01G250200 chr4A 92.500 280 20 1 426 704 670843143 670842864 3.310000e-107 399.0
33 TraesCS3B01G250200 chr1A 93.165 278 17 2 426 701 240478822 240478545 1.980000e-109 407.0
34 TraesCS3B01G250200 chr1A 93.431 274 18 0 428 701 462944750 462945023 1.980000e-109 407.0
35 TraesCS3B01G250200 chr6A 93.141 277 18 1 426 701 91701929 91701653 7.110000e-109 405.0
36 TraesCS3B01G250200 chr7A 85.827 127 16 2 5132 5256 192667804 192667930 3.700000e-27 134.0
37 TraesCS3B01G250200 chr5B 86.607 112 14 1 5131 5241 618275220 618275109 8.010000e-24 122.0
38 TraesCS3B01G250200 chr5B 85.586 111 14 2 5130 5239 553354236 553354127 1.340000e-21 115.0
39 TraesCS3B01G250200 chr1D 79.412 136 16 7 5127 5260 211693984 211693859 1.050000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G250200 chr3B 399503036 399508924 5888 False 10876.000000 10876 100.000000 1 5889 1 chr3B.!!$F1 5888
1 TraesCS3B01G250200 chr3A 405500128 405505295 5167 False 2032.250000 5193 95.675250 171 5571 4 chr3A.!!$F2 5400
2 TraesCS3B01G250200 chr3D 320634296 320639819 5523 True 1162.442857 2745 96.086714 1 5370 7 chr3D.!!$R2 5369

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
675 676 0.184211 TGGCATGCATGATACCAGCT 59.816 50.000 30.64 0.0 0.00 4.24 F
1668 1928 0.257039 CCATTCCCTGCTACTTGCCT 59.743 55.000 0.00 0.0 42.00 4.75 F
2272 2534 0.460284 GTGTGGAGCCTACATGGACG 60.460 60.000 0.00 0.0 38.35 4.79 F
2665 2927 0.820226 TGAGCCTTCTGATGAGGTCG 59.180 55.000 0.00 0.0 0.00 4.79 F
3095 3390 1.376037 CCTTGTTGGAGAGGTCGGC 60.376 63.158 0.00 0.0 38.35 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2272 2534 1.028868 GCTCATCAAGGGAGTGTGGC 61.029 60.000 0.00 0.00 34.83 5.01 R
3283 3578 1.136085 CGAATTTCTTCGCGCCAAGAA 60.136 47.619 23.68 23.68 46.76 2.52 R
4225 4710 0.472925 TGCAAGTCTGTGGTAGGGGA 60.473 55.000 0.00 0.00 0.00 4.81 R
4741 5313 1.142688 ACCCCAGCACTCCTTGGATT 61.143 55.000 0.00 0.00 0.00 3.01 R
4960 5532 2.353208 GCTCACCACTTCTCTTCACGAT 60.353 50.000 0.00 0.00 0.00 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 8.498054 AGATACATGTTACCTCATTTTCTGTG 57.502 34.615 2.30 0.00 0.00 3.66
111 112 5.801350 TGAACCTAAAGATGAAAGATGCG 57.199 39.130 0.00 0.00 0.00 4.73
143 144 2.496817 GGTCAGACGCCTAGCCAG 59.503 66.667 0.00 0.00 0.00 4.85
147 148 3.151022 AGACGCCTAGCCAGGAGC 61.151 66.667 0.85 0.00 45.12 4.70
158 159 2.351244 CCAGGAGCGTAGACAGGCA 61.351 63.158 0.00 0.00 38.03 4.75
442 443 2.684881 CCAGTTAGGCTGCTTGTAATGG 59.315 50.000 0.00 0.27 43.71 3.16
443 444 2.684881 CAGTTAGGCTGCTTGTAATGGG 59.315 50.000 0.00 0.00 38.52 4.00
444 445 2.308866 AGTTAGGCTGCTTGTAATGGGT 59.691 45.455 0.00 0.00 0.00 4.51
445 446 3.521937 AGTTAGGCTGCTTGTAATGGGTA 59.478 43.478 0.00 0.00 0.00 3.69
446 447 2.717639 AGGCTGCTTGTAATGGGTAG 57.282 50.000 0.00 0.00 0.00 3.18
447 448 1.916181 AGGCTGCTTGTAATGGGTAGT 59.084 47.619 0.00 0.00 0.00 2.73
448 449 3.112263 AGGCTGCTTGTAATGGGTAGTA 58.888 45.455 0.00 0.00 0.00 1.82
449 450 3.716872 AGGCTGCTTGTAATGGGTAGTAT 59.283 43.478 0.00 0.00 0.00 2.12
450 451 4.065789 GGCTGCTTGTAATGGGTAGTATC 58.934 47.826 0.00 0.00 0.00 2.24
451 452 4.444306 GGCTGCTTGTAATGGGTAGTATCA 60.444 45.833 0.00 0.00 0.00 2.15
452 453 5.308825 GCTGCTTGTAATGGGTAGTATCAT 58.691 41.667 0.00 0.00 0.00 2.45
453 454 6.464222 GCTGCTTGTAATGGGTAGTATCATA 58.536 40.000 0.00 0.00 0.00 2.15
454 455 6.369065 GCTGCTTGTAATGGGTAGTATCATAC 59.631 42.308 0.00 0.00 0.00 2.39
455 456 6.765403 TGCTTGTAATGGGTAGTATCATACC 58.235 40.000 0.00 0.00 43.90 2.73
456 457 6.557253 TGCTTGTAATGGGTAGTATCATACCT 59.443 38.462 3.14 0.00 44.06 3.08
457 458 7.071950 TGCTTGTAATGGGTAGTATCATACCTT 59.928 37.037 3.14 0.00 44.06 3.50
458 459 8.591072 GCTTGTAATGGGTAGTATCATACCTTA 58.409 37.037 3.14 0.00 44.06 2.69
460 461 9.664777 TTGTAATGGGTAGTATCATACCTTAGT 57.335 33.333 3.14 0.00 44.06 2.24
503 504 7.425224 AGGTATGATACTACCTCCATAATGC 57.575 40.000 2.24 0.00 46.98 3.56
504 505 6.959954 AGGTATGATACTACCTCCATAATGCA 59.040 38.462 2.24 0.00 46.98 3.96
505 506 7.457852 AGGTATGATACTACCTCCATAATGCAA 59.542 37.037 2.24 0.00 46.98 4.08
506 507 8.100791 GGTATGATACTACCTCCATAATGCAAA 58.899 37.037 2.24 0.00 38.51 3.68
507 508 9.155975 GTATGATACTACCTCCATAATGCAAAG 57.844 37.037 0.00 0.00 0.00 2.77
508 509 7.136822 TGATACTACCTCCATAATGCAAAGT 57.863 36.000 0.00 0.00 0.00 2.66
509 510 8.257602 TGATACTACCTCCATAATGCAAAGTA 57.742 34.615 0.00 0.00 0.00 2.24
510 511 8.880244 TGATACTACCTCCATAATGCAAAGTAT 58.120 33.333 0.00 0.00 32.00 2.12
511 512 9.372369 GATACTACCTCCATAATGCAAAGTATC 57.628 37.037 0.00 0.00 37.30 2.24
512 513 7.136822 ACTACCTCCATAATGCAAAGTATCA 57.863 36.000 0.00 0.00 0.00 2.15
513 514 7.749666 ACTACCTCCATAATGCAAAGTATCAT 58.250 34.615 0.00 0.00 0.00 2.45
514 515 8.880244 ACTACCTCCATAATGCAAAGTATCATA 58.120 33.333 0.00 0.00 0.00 2.15
515 516 9.896645 CTACCTCCATAATGCAAAGTATCATAT 57.103 33.333 0.00 0.00 0.00 1.78
517 518 9.672673 ACCTCCATAATGCAAAGTATCATATAC 57.327 33.333 0.00 0.00 0.00 1.47
518 519 9.896645 CCTCCATAATGCAAAGTATCATATACT 57.103 33.333 0.00 0.00 0.00 2.12
549 550 9.295825 TCATAGGTAACCTTATTTATTGCCATG 57.704 33.333 0.00 0.00 34.61 3.66
550 551 6.405278 AGGTAACCTTATTTATTGCCATGC 57.595 37.500 0.00 0.00 31.11 4.06
551 552 5.896678 AGGTAACCTTATTTATTGCCATGCA 59.103 36.000 0.00 0.00 34.20 3.96
552 553 6.554605 AGGTAACCTTATTTATTGCCATGCAT 59.445 34.615 0.00 0.00 35.91 3.96
553 554 6.646240 GGTAACCTTATTTATTGCCATGCATG 59.354 38.462 20.19 20.19 38.76 4.06
554 555 6.482898 AACCTTATTTATTGCCATGCATGA 57.517 33.333 28.31 8.76 38.76 3.07
555 556 5.846203 ACCTTATTTATTGCCATGCATGAC 58.154 37.500 28.31 17.77 38.76 3.06
556 557 5.363292 ACCTTATTTATTGCCATGCATGACA 59.637 36.000 28.31 20.53 38.76 3.58
557 558 5.693104 CCTTATTTATTGCCATGCATGACAC 59.307 40.000 28.31 16.49 38.76 3.67
558 559 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
559 560 4.739587 TTTATTGCCATGCATGACACAT 57.260 36.364 28.31 18.68 38.76 3.21
560 561 5.848833 TTTATTGCCATGCATGACACATA 57.151 34.783 28.31 17.78 38.76 2.29
561 562 5.441709 TTATTGCCATGCATGACACATAG 57.558 39.130 28.31 10.23 38.76 2.23
562 563 2.423446 TGCCATGCATGACACATAGT 57.577 45.000 28.31 0.00 31.71 2.12
563 564 3.557228 TGCCATGCATGACACATAGTA 57.443 42.857 28.31 5.91 31.71 1.82
564 565 3.469739 TGCCATGCATGACACATAGTAG 58.530 45.455 28.31 8.01 31.71 2.57
565 566 2.225019 GCCATGCATGACACATAGTAGC 59.775 50.000 28.31 14.15 0.00 3.58
566 567 3.469739 CCATGCATGACACATAGTAGCA 58.530 45.455 28.31 0.00 37.13 3.49
567 568 4.070009 CCATGCATGACACATAGTAGCAT 58.930 43.478 28.31 0.00 41.24 3.79
568 569 5.240121 CCATGCATGACACATAGTAGCATA 58.760 41.667 28.31 0.00 39.67 3.14
569 570 5.878669 CCATGCATGACACATAGTAGCATAT 59.121 40.000 28.31 0.00 39.67 1.78
570 571 6.036844 CCATGCATGACACATAGTAGCATATC 59.963 42.308 28.31 0.00 39.67 1.63
571 572 6.100404 TGCATGACACATAGTAGCATATCA 57.900 37.500 0.00 0.00 30.65 2.15
572 573 6.704310 TGCATGACACATAGTAGCATATCAT 58.296 36.000 0.00 0.00 30.65 2.45
573 574 7.163441 TGCATGACACATAGTAGCATATCATT 58.837 34.615 0.00 0.00 30.65 2.57
574 575 7.662669 TGCATGACACATAGTAGCATATCATTT 59.337 33.333 0.00 0.00 30.65 2.32
575 576 9.154847 GCATGACACATAGTAGCATATCATTTA 57.845 33.333 0.00 0.00 0.00 1.40
586 587 9.371136 AGTAGCATATCATTTAACATGATACGG 57.629 33.333 16.08 13.63 42.29 4.02
587 588 9.151471 GTAGCATATCATTTAACATGATACGGT 57.849 33.333 16.08 15.86 41.94 4.83
589 590 9.890629 AGCATATCATTTAACATGATACGGTAT 57.109 29.630 16.08 0.00 41.94 2.73
638 639 9.466497 TCTTTCTTCATTTAATTCTATGCCACT 57.534 29.630 0.00 0.00 0.00 4.00
639 640 9.727627 CTTTCTTCATTTAATTCTATGCCACTC 57.272 33.333 0.00 0.00 0.00 3.51
640 641 8.806429 TTCTTCATTTAATTCTATGCCACTCA 57.194 30.769 0.00 0.00 0.00 3.41
641 642 8.442632 TCTTCATTTAATTCTATGCCACTCAG 57.557 34.615 0.00 0.00 0.00 3.35
642 643 6.624352 TCATTTAATTCTATGCCACTCAGC 57.376 37.500 0.00 0.00 0.00 4.26
652 653 3.423539 TGCCACTCAGCAAAATAGTCT 57.576 42.857 0.00 0.00 40.56 3.24
653 654 4.551702 TGCCACTCAGCAAAATAGTCTA 57.448 40.909 0.00 0.00 40.56 2.59
654 655 4.507710 TGCCACTCAGCAAAATAGTCTAG 58.492 43.478 0.00 0.00 40.56 2.43
655 656 4.020218 TGCCACTCAGCAAAATAGTCTAGT 60.020 41.667 0.00 0.00 40.56 2.57
656 657 4.938226 GCCACTCAGCAAAATAGTCTAGTT 59.062 41.667 0.00 0.00 0.00 2.24
657 658 5.163814 GCCACTCAGCAAAATAGTCTAGTTG 60.164 44.000 0.00 0.00 0.00 3.16
658 659 5.352569 CCACTCAGCAAAATAGTCTAGTTGG 59.647 44.000 0.00 0.00 0.00 3.77
659 660 4.938226 ACTCAGCAAAATAGTCTAGTTGGC 59.062 41.667 10.82 10.82 33.11 4.52
660 661 4.905429 TCAGCAAAATAGTCTAGTTGGCA 58.095 39.130 18.99 0.00 35.26 4.92
661 662 5.500234 TCAGCAAAATAGTCTAGTTGGCAT 58.500 37.500 18.99 4.45 35.26 4.40
662 663 5.355071 TCAGCAAAATAGTCTAGTTGGCATG 59.645 40.000 18.99 14.09 35.26 4.06
663 664 4.096984 AGCAAAATAGTCTAGTTGGCATGC 59.903 41.667 18.99 9.90 35.26 4.06
664 665 4.142403 GCAAAATAGTCTAGTTGGCATGCA 60.142 41.667 21.36 2.54 33.17 3.96
665 666 5.450965 GCAAAATAGTCTAGTTGGCATGCAT 60.451 40.000 21.36 4.57 33.17 3.96
666 667 5.762825 AAATAGTCTAGTTGGCATGCATG 57.237 39.130 22.70 22.70 0.00 4.06
667 668 4.694760 ATAGTCTAGTTGGCATGCATGA 57.305 40.909 30.64 7.50 0.00 3.07
668 669 3.572632 AGTCTAGTTGGCATGCATGAT 57.427 42.857 30.64 11.73 0.00 2.45
669 670 4.694760 AGTCTAGTTGGCATGCATGATA 57.305 40.909 30.64 14.66 0.00 2.15
670 671 4.384056 AGTCTAGTTGGCATGCATGATAC 58.616 43.478 30.64 21.28 0.00 2.24
671 672 3.499918 GTCTAGTTGGCATGCATGATACC 59.500 47.826 30.64 21.08 0.00 2.73
672 673 2.440517 AGTTGGCATGCATGATACCA 57.559 45.000 30.64 23.37 0.00 3.25
673 674 2.304092 AGTTGGCATGCATGATACCAG 58.696 47.619 30.64 1.83 0.00 4.00
674 675 1.034356 TTGGCATGCATGATACCAGC 58.966 50.000 30.64 12.56 0.00 4.85
675 676 0.184211 TGGCATGCATGATACCAGCT 59.816 50.000 30.64 0.00 0.00 4.24
676 677 1.420891 TGGCATGCATGATACCAGCTA 59.579 47.619 30.64 7.90 0.00 3.32
677 678 2.040679 TGGCATGCATGATACCAGCTAT 59.959 45.455 30.64 0.00 0.00 2.97
678 679 2.422479 GGCATGCATGATACCAGCTATG 59.578 50.000 30.64 0.23 0.00 2.23
679 680 3.340928 GCATGCATGATACCAGCTATGA 58.659 45.455 30.64 0.00 0.00 2.15
680 681 3.945921 GCATGCATGATACCAGCTATGAT 59.054 43.478 30.64 0.00 0.00 2.45
681 682 5.121105 GCATGCATGATACCAGCTATGATA 58.879 41.667 30.64 0.00 0.00 2.15
682 683 5.007430 GCATGCATGATACCAGCTATGATAC 59.993 44.000 30.64 2.07 0.00 2.24
683 684 6.346896 CATGCATGATACCAGCTATGATACT 58.653 40.000 22.59 0.00 0.00 2.12
684 685 7.495055 CATGCATGATACCAGCTATGATACTA 58.505 38.462 22.59 0.00 0.00 1.82
685 686 7.666063 TGCATGATACCAGCTATGATACTAT 57.334 36.000 0.00 0.00 0.00 2.12
686 687 7.720442 TGCATGATACCAGCTATGATACTATC 58.280 38.462 0.00 0.00 0.00 2.08
687 688 7.342799 TGCATGATACCAGCTATGATACTATCA 59.657 37.037 0.00 1.10 44.55 2.15
699 700 5.386958 TGATACTATCATTACGACCAGCC 57.613 43.478 0.00 0.00 33.59 4.85
746 747 4.728102 CGCCAGCCACGTAACCGA 62.728 66.667 0.00 0.00 37.88 4.69
753 754 1.373246 CCACGTAACCGAGCCGAAA 60.373 57.895 0.00 0.00 37.88 3.46
813 814 7.686938 CGCAAAAATAAGTTAGGAACTCGTAAG 59.313 37.037 0.00 0.00 41.91 2.34
924 928 1.029681 GTCAACGGCCAAACTTCCTT 58.970 50.000 2.24 0.00 0.00 3.36
1014 1263 3.463585 CCCATGGCATTTGCGGCT 61.464 61.111 6.09 0.00 43.26 5.52
1125 1374 3.873952 GCTTCGACAGGATATTCAGCTTT 59.126 43.478 0.00 0.00 0.00 3.51
1294 1543 5.392286 TCGGTAAAAACAACAAACACAGAC 58.608 37.500 0.00 0.00 0.00 3.51
1297 1546 6.144080 CGGTAAAAACAACAAACACAGACAAA 59.856 34.615 0.00 0.00 0.00 2.83
1298 1547 7.285069 GGTAAAAACAACAAACACAGACAAAC 58.715 34.615 0.00 0.00 0.00 2.93
1351 1604 2.738846 GGTTCCGTCGTATCGCTCTATA 59.261 50.000 0.00 0.00 0.00 1.31
1387 1640 0.842030 TGCTGGAACTGGACTGGGAT 60.842 55.000 0.00 0.00 0.00 3.85
1437 1690 8.762481 ATACTATTGGTTTTTAGGGATTGACC 57.238 34.615 0.00 0.00 38.08 4.02
1500 1753 2.512485 TTTACTCAACGGCGACAGAA 57.488 45.000 16.62 0.00 0.00 3.02
1603 1863 6.442513 AGGGATTCATCATCGTTTCTTTTC 57.557 37.500 0.00 0.00 31.73 2.29
1636 1896 3.476646 CGTGCGTGCTCTGCTGAG 61.477 66.667 15.76 15.76 42.96 3.35
1668 1928 0.257039 CCATTCCCTGCTACTTGCCT 59.743 55.000 0.00 0.00 42.00 4.75
1764 2024 2.541588 CGGTTGCAGTTTGGAGAGTTTG 60.542 50.000 0.00 0.00 0.00 2.93
1784 2044 1.336125 GCAAGTAGCATGCCTTCCATC 59.664 52.381 15.66 0.00 44.79 3.51
1984 2246 2.170166 CAACCACCTGTGTATTGGCAT 58.830 47.619 0.00 0.00 33.25 4.40
2194 2456 1.168714 GTGGTGACTTCCTGAATGGC 58.831 55.000 0.00 0.00 35.26 4.40
2272 2534 0.460284 GTGTGGAGCCTACATGGACG 60.460 60.000 0.00 0.00 38.35 4.79
2326 2588 2.554032 CAAAAGACTGCTTCCGTCCATT 59.446 45.455 0.00 0.00 31.82 3.16
2335 2597 1.773856 TTCCGTCCATTGCCTCCACA 61.774 55.000 0.00 0.00 0.00 4.17
2402 2664 0.958091 TGTGTGCAACCATTACCTGC 59.042 50.000 0.00 0.00 34.36 4.85
2411 2673 6.094881 GTGCAACCATTACCTGCTTAAAGATA 59.905 38.462 0.00 0.00 37.00 1.98
2414 2676 8.507249 GCAACCATTACCTGCTTAAAGATATAG 58.493 37.037 0.00 0.00 33.20 1.31
2524 2786 4.403432 CCAATCACTGCCCTGAATGTTTAT 59.597 41.667 0.00 0.00 0.00 1.40
2598 2860 8.883954 AGTCCTTACACTGTTTTAGTTAACTC 57.116 34.615 12.39 0.00 37.60 3.01
2599 2861 8.480501 AGTCCTTACACTGTTTTAGTTAACTCA 58.519 33.333 12.39 2.89 37.60 3.41
2665 2927 0.820226 TGAGCCTTCTGATGAGGTCG 59.180 55.000 0.00 0.00 0.00 4.79
2743 3038 6.317910 GTCAACACATTTGACTGTTTTCAC 57.682 37.500 9.41 0.00 43.91 3.18
2744 3039 5.003402 GTCAACACATTTGACTGTTTTCACG 59.997 40.000 9.41 0.00 43.91 4.35
2745 3040 4.955925 ACACATTTGACTGTTTTCACGA 57.044 36.364 0.00 0.00 0.00 4.35
2746 3041 4.908736 ACACATTTGACTGTTTTCACGAG 58.091 39.130 0.00 0.00 0.00 4.18
2747 3042 4.394920 ACACATTTGACTGTTTTCACGAGT 59.605 37.500 0.00 0.00 0.00 4.18
2748 3043 4.730042 CACATTTGACTGTTTTCACGAGTG 59.270 41.667 0.00 0.00 0.00 3.51
2749 3044 4.634004 ACATTTGACTGTTTTCACGAGTGA 59.366 37.500 1.24 1.24 37.91 3.41
2750 3045 4.593597 TTTGACTGTTTTCACGAGTGAC 57.406 40.909 5.30 0.00 39.66 3.67
2751 3046 3.520290 TGACTGTTTTCACGAGTGACT 57.480 42.857 5.30 0.00 39.66 3.41
2752 3047 3.186909 TGACTGTTTTCACGAGTGACTG 58.813 45.455 5.30 2.74 39.66 3.51
2753 3048 3.187700 GACTGTTTTCACGAGTGACTGT 58.812 45.455 5.30 5.74 39.66 3.55
2754 3049 3.596214 ACTGTTTTCACGAGTGACTGTT 58.404 40.909 5.30 0.00 39.66 3.16
2755 3050 4.000988 ACTGTTTTCACGAGTGACTGTTT 58.999 39.130 5.30 0.00 39.66 2.83
2756 3051 4.454504 ACTGTTTTCACGAGTGACTGTTTT 59.545 37.500 5.30 0.00 39.66 2.43
2757 3052 5.640357 ACTGTTTTCACGAGTGACTGTTTTA 59.360 36.000 5.30 0.00 39.66 1.52
2758 3053 6.102006 TGTTTTCACGAGTGACTGTTTTAG 57.898 37.500 5.30 0.00 39.66 1.85
2759 3054 5.640357 TGTTTTCACGAGTGACTGTTTTAGT 59.360 36.000 5.30 0.00 44.02 2.24
2770 3065 9.319143 GAGTGACTGTTTTAGTAATCAGCATAT 57.681 33.333 12.53 7.37 40.53 1.78
2771 3066 9.102757 AGTGACTGTTTTAGTAATCAGCATATG 57.897 33.333 0.00 0.00 40.53 1.78
2860 3155 7.020602 TGCAAATTACATGTGTGATAAAGACG 58.979 34.615 9.11 0.00 0.00 4.18
2869 3164 6.546972 TGTGTGATAAAGACGCATAAAACA 57.453 33.333 0.00 0.00 0.00 2.83
2872 3167 8.172484 TGTGTGATAAAGACGCATAAAACATAC 58.828 33.333 0.00 0.00 0.00 2.39
2895 3190 4.922206 TGCCAAGTTGATACTGGAATTCT 58.078 39.130 3.87 0.00 34.01 2.40
2903 3198 8.000780 AGTTGATACTGGAATTCTAATTTGCC 57.999 34.615 5.23 0.00 31.99 4.52
3014 3309 6.035975 GCCATTTACGAGGAAATTCCAAATTG 59.964 38.462 15.21 8.18 39.61 2.32
3095 3390 1.376037 CCTTGTTGGAGAGGTCGGC 60.376 63.158 0.00 0.00 38.35 5.54
3219 3514 3.419943 TGTAGATGCATGTGCCTTTTCA 58.580 40.909 2.46 0.00 41.18 2.69
3283 3578 6.699575 ATTTGTTTCGCAGGAGCTTATAAT 57.300 33.333 0.00 0.00 39.10 1.28
3413 3708 3.981212 AGGGTGCATTAAGTGGCTAAAT 58.019 40.909 0.00 0.00 0.00 1.40
3577 3872 7.502895 TGAGTCCTGCCTCTTAAGTAATAGTAG 59.497 40.741 1.63 0.00 32.50 2.57
3674 3969 4.040445 TGTTACACAAGCCTTCAAAAGC 57.960 40.909 0.00 0.00 0.00 3.51
3680 3975 4.141869 ACACAAGCCTTCAAAAGCTCATTT 60.142 37.500 0.00 0.00 38.74 2.32
3689 3984 7.381323 CCTTCAAAAGCTCATTTCCAATACTT 58.619 34.615 0.00 0.00 0.00 2.24
3707 4002 8.665685 CCAATACTTAACTACAGTTCATCAACC 58.334 37.037 0.00 0.00 39.31 3.77
3804 4184 8.907222 ATCAAAACCATGATTATTAAATGGCC 57.093 30.769 0.00 0.00 43.96 5.36
3842 4222 5.124297 TGGCATTCAGTGATACACAATCTTG 59.876 40.000 0.00 0.00 36.74 3.02
4225 4710 8.095452 AGATCTAAATCAACCCTGTATTGTCT 57.905 34.615 0.00 0.00 34.07 3.41
4504 4993 7.365741 GCATACATAGCAATGCAAGAAACTAT 58.634 34.615 8.35 0.00 46.19 2.12
4505 4994 7.536622 GCATACATAGCAATGCAAGAAACTATC 59.463 37.037 8.35 0.00 46.19 2.08
4741 5313 4.158394 ACCGAAGCGACCTACAAAGTTATA 59.842 41.667 0.00 0.00 0.00 0.98
4789 5361 4.623171 GCTGTTCCTCCTCTTTCGGAAATA 60.623 45.833 3.24 0.00 38.45 1.40
4960 5532 2.104111 TCACTTCGGGCTCTTCTCAAAA 59.896 45.455 0.00 0.00 0.00 2.44
5277 5852 1.111277 TTATGCGCTCTGCTCAGGTA 58.889 50.000 9.73 0.00 46.63 3.08
5289 5864 3.299503 TGCTCAGGTAGTGATGCTATGA 58.700 45.455 0.00 0.00 33.51 2.15
5342 5917 7.219484 ACCATCAAAAGATTACACCTCAAAG 57.781 36.000 0.00 0.00 0.00 2.77
5348 5923 8.567948 TCAAAAGATTACACCTCAAAGCTTAAG 58.432 33.333 0.00 0.00 31.50 1.85
5358 5933 5.474876 ACCTCAAAGCTTAAGTCCTCAAATG 59.525 40.000 0.00 0.00 0.00 2.32
5392 5967 2.623878 TCCGTGAAACTAGCCAAACA 57.376 45.000 0.00 0.00 31.75 2.83
5408 5983 6.042143 AGCCAAACACACAAATTTAACTCAG 58.958 36.000 0.00 0.00 0.00 3.35
5409 5984 5.276820 GCCAAACACACAAATTTAACTCAGC 60.277 40.000 0.00 0.00 0.00 4.26
5427 6002 2.540931 CAGCTCCAAATTGTGCACAAAC 59.459 45.455 34.06 17.32 39.55 2.93
5430 6005 3.560896 GCTCCAAATTGTGCACAAACATT 59.439 39.130 34.06 24.70 39.55 2.71
5582 6158 7.515957 CTCGAACGAGCTAATTTAACCTAAA 57.484 36.000 11.13 0.00 35.31 1.85
5583 6159 7.887996 TCGAACGAGCTAATTTAACCTAAAA 57.112 32.000 0.00 0.00 0.00 1.52
5584 6160 8.483307 TCGAACGAGCTAATTTAACCTAAAAT 57.517 30.769 0.00 0.00 0.00 1.82
5585 6161 8.385111 TCGAACGAGCTAATTTAACCTAAAATG 58.615 33.333 0.00 0.00 0.00 2.32
5586 6162 8.385111 CGAACGAGCTAATTTAACCTAAAATGA 58.615 33.333 0.00 0.00 0.00 2.57
5587 6163 9.704098 GAACGAGCTAATTTAACCTAAAATGAG 57.296 33.333 0.00 0.00 32.44 2.90
5593 6169 9.937175 GCTAATTTAACCTAAAATGAGCAGTAG 57.063 33.333 11.96 0.00 46.35 2.57
5598 6174 8.911918 TTAACCTAAAATGAGCAGTAGTTTGA 57.088 30.769 0.00 0.00 0.00 2.69
5599 6175 7.440523 AACCTAAAATGAGCAGTAGTTTGAG 57.559 36.000 0.00 0.00 0.00 3.02
5600 6176 6.534634 ACCTAAAATGAGCAGTAGTTTGAGT 58.465 36.000 0.00 0.00 0.00 3.41
5601 6177 6.651225 ACCTAAAATGAGCAGTAGTTTGAGTC 59.349 38.462 0.00 0.00 0.00 3.36
5602 6178 6.650807 CCTAAAATGAGCAGTAGTTTGAGTCA 59.349 38.462 0.00 0.00 0.00 3.41
5603 6179 6.551385 AAAATGAGCAGTAGTTTGAGTCAG 57.449 37.500 0.00 0.00 0.00 3.51
5604 6180 5.474578 AATGAGCAGTAGTTTGAGTCAGA 57.525 39.130 0.00 0.00 0.00 3.27
5605 6181 4.937201 TGAGCAGTAGTTTGAGTCAGAA 57.063 40.909 0.00 0.00 0.00 3.02
5606 6182 5.474578 TGAGCAGTAGTTTGAGTCAGAAT 57.525 39.130 0.00 0.00 0.00 2.40
5607 6183 5.473931 TGAGCAGTAGTTTGAGTCAGAATC 58.526 41.667 0.00 0.00 0.00 2.52
5608 6184 5.244851 TGAGCAGTAGTTTGAGTCAGAATCT 59.755 40.000 0.00 0.00 0.00 2.40
5609 6185 5.477510 AGCAGTAGTTTGAGTCAGAATCTG 58.522 41.667 3.38 3.38 0.00 2.90
5610 6186 5.011533 AGCAGTAGTTTGAGTCAGAATCTGT 59.988 40.000 10.36 0.00 32.61 3.41
5611 6187 5.698545 GCAGTAGTTTGAGTCAGAATCTGTT 59.301 40.000 10.36 0.00 32.61 3.16
5612 6188 6.347240 GCAGTAGTTTGAGTCAGAATCTGTTG 60.347 42.308 10.36 0.00 32.61 3.33
5613 6189 6.146837 CAGTAGTTTGAGTCAGAATCTGTTGG 59.853 42.308 10.36 0.00 32.61 3.77
5614 6190 4.392940 AGTTTGAGTCAGAATCTGTTGGG 58.607 43.478 10.36 0.00 32.61 4.12
5615 6191 4.103153 AGTTTGAGTCAGAATCTGTTGGGA 59.897 41.667 10.36 0.00 32.61 4.37
5616 6192 4.705110 TTGAGTCAGAATCTGTTGGGAA 57.295 40.909 10.36 0.00 32.61 3.97
5617 6193 4.705110 TGAGTCAGAATCTGTTGGGAAA 57.295 40.909 10.36 0.00 32.61 3.13
5618 6194 4.389374 TGAGTCAGAATCTGTTGGGAAAC 58.611 43.478 10.36 0.00 32.61 2.78
5619 6195 3.403038 AGTCAGAATCTGTTGGGAAACG 58.597 45.455 10.36 0.00 32.61 3.60
5620 6196 3.139077 GTCAGAATCTGTTGGGAAACGT 58.861 45.455 10.36 0.00 32.61 3.99
5621 6197 4.039973 AGTCAGAATCTGTTGGGAAACGTA 59.960 41.667 10.36 0.00 32.61 3.57
5622 6198 4.389077 GTCAGAATCTGTTGGGAAACGTAG 59.611 45.833 10.36 0.00 32.61 3.51
5623 6199 3.125316 CAGAATCTGTTGGGAAACGTAGC 59.875 47.826 1.31 0.00 0.00 3.58
5624 6200 2.851263 ATCTGTTGGGAAACGTAGCA 57.149 45.000 0.00 0.00 0.00 3.49
5625 6201 2.851263 TCTGTTGGGAAACGTAGCAT 57.149 45.000 0.00 0.00 0.00 3.79
5626 6202 2.422597 TCTGTTGGGAAACGTAGCATG 58.577 47.619 0.00 0.00 0.00 4.06
5627 6203 0.878416 TGTTGGGAAACGTAGCATGC 59.122 50.000 10.51 10.51 0.00 4.06
5628 6204 0.878416 GTTGGGAAACGTAGCATGCA 59.122 50.000 21.98 2.77 0.00 3.96
5629 6205 1.268352 GTTGGGAAACGTAGCATGCAA 59.732 47.619 21.98 0.00 0.00 4.08
5630 6206 1.832883 TGGGAAACGTAGCATGCAAT 58.167 45.000 21.98 1.90 0.00 3.56
5631 6207 2.166829 TGGGAAACGTAGCATGCAATT 58.833 42.857 21.98 6.80 0.00 2.32
5632 6208 2.560542 TGGGAAACGTAGCATGCAATTT 59.439 40.909 21.98 13.67 0.00 1.82
5633 6209 3.179048 GGGAAACGTAGCATGCAATTTC 58.821 45.455 21.98 20.39 0.00 2.17
5634 6210 3.366883 GGGAAACGTAGCATGCAATTTCA 60.367 43.478 21.98 0.00 0.00 2.69
5635 6211 4.233789 GGAAACGTAGCATGCAATTTCAA 58.766 39.130 21.98 0.00 0.00 2.69
5636 6212 4.683781 GGAAACGTAGCATGCAATTTCAAA 59.316 37.500 21.98 0.00 0.00 2.69
5637 6213 5.176590 GGAAACGTAGCATGCAATTTCAAAA 59.823 36.000 21.98 0.00 0.00 2.44
5638 6214 6.292596 GGAAACGTAGCATGCAATTTCAAAAA 60.293 34.615 21.98 0.00 0.00 1.94
5639 6215 6.783892 AACGTAGCATGCAATTTCAAAAAT 57.216 29.167 21.98 0.00 0.00 1.82
5640 6216 6.783892 ACGTAGCATGCAATTTCAAAAATT 57.216 29.167 21.98 0.00 0.00 1.82
5641 6217 7.188468 ACGTAGCATGCAATTTCAAAAATTT 57.812 28.000 21.98 0.00 0.00 1.82
5642 6218 7.290118 ACGTAGCATGCAATTTCAAAAATTTC 58.710 30.769 21.98 0.00 0.00 2.17
5643 6219 6.737750 CGTAGCATGCAATTTCAAAAATTTCC 59.262 34.615 21.98 0.00 0.00 3.13
5644 6220 6.887626 AGCATGCAATTTCAAAAATTTCCT 57.112 29.167 21.98 0.00 0.00 3.36
5645 6221 7.982761 AGCATGCAATTTCAAAAATTTCCTA 57.017 28.000 21.98 0.00 0.00 2.94
5646 6222 8.570068 AGCATGCAATTTCAAAAATTTCCTAT 57.430 26.923 21.98 0.00 0.00 2.57
5647 6223 8.455682 AGCATGCAATTTCAAAAATTTCCTATG 58.544 29.630 21.98 0.00 0.00 2.23
5648 6224 7.219344 GCATGCAATTTCAAAAATTTCCTATGC 59.781 33.333 14.21 0.00 0.00 3.14
5649 6225 7.982761 TGCAATTTCAAAAATTTCCTATGCT 57.017 28.000 0.00 0.00 0.00 3.79
5650 6226 8.031848 TGCAATTTCAAAAATTTCCTATGCTC 57.968 30.769 0.00 0.00 0.00 4.26
5651 6227 7.660617 TGCAATTTCAAAAATTTCCTATGCTCA 59.339 29.630 0.00 0.00 0.00 4.26
5652 6228 7.959109 GCAATTTCAAAAATTTCCTATGCTCAC 59.041 33.333 0.00 0.00 0.00 3.51
5653 6229 7.816945 ATTTCAAAAATTTCCTATGCTCACG 57.183 32.000 0.00 0.00 0.00 4.35
5654 6230 4.732784 TCAAAAATTTCCTATGCTCACGC 58.267 39.130 0.00 0.00 0.00 5.34
5668 6244 5.316327 TGCTCACGCAAGATCTATATAGG 57.684 43.478 9.89 0.00 44.62 2.57
5669 6245 5.010282 TGCTCACGCAAGATCTATATAGGA 58.990 41.667 9.89 0.00 44.62 2.94
5670 6246 5.124617 TGCTCACGCAAGATCTATATAGGAG 59.875 44.000 9.89 6.28 44.62 3.69
5671 6247 5.355630 GCTCACGCAAGATCTATATAGGAGA 59.644 44.000 9.89 0.00 43.62 3.71
5672 6248 6.039270 GCTCACGCAAGATCTATATAGGAGAT 59.961 42.308 9.89 0.00 43.62 2.75
5673 6249 7.326968 TCACGCAAGATCTATATAGGAGATG 57.673 40.000 9.89 6.14 43.62 2.90
5674 6250 5.976534 CACGCAAGATCTATATAGGAGATGC 59.023 44.000 9.89 13.39 43.62 3.91
5675 6251 5.654209 ACGCAAGATCTATATAGGAGATGCA 59.346 40.000 20.83 0.00 43.62 3.96
5676 6252 6.323482 ACGCAAGATCTATATAGGAGATGCAT 59.677 38.462 20.83 0.00 43.62 3.96
5677 6253 7.503902 ACGCAAGATCTATATAGGAGATGCATA 59.496 37.037 20.83 0.00 43.62 3.14
5678 6254 8.022550 CGCAAGATCTATATAGGAGATGCATAG 58.977 40.741 20.83 0.00 43.02 2.23
5679 6255 7.814107 GCAAGATCTATATAGGAGATGCATAGC 59.186 40.741 18.34 0.00 33.71 2.97
5680 6256 8.858094 CAAGATCTATATAGGAGATGCATAGCA 58.142 37.037 9.89 0.00 44.86 3.49
5681 6257 9.431690 AAGATCTATATAGGAGATGCATAGCAA 57.568 33.333 9.89 0.00 43.62 3.91
5682 6258 8.859090 AGATCTATATAGGAGATGCATAGCAAC 58.141 37.037 9.89 0.00 43.62 4.17
5683 6259 7.032377 TCTATATAGGAGATGCATAGCAACG 57.968 40.000 9.89 0.00 43.62 4.10
5684 6260 5.921962 ATATAGGAGATGCATAGCAACGA 57.078 39.130 0.00 0.00 43.62 3.85
5685 6261 2.522836 AGGAGATGCATAGCAACGAG 57.477 50.000 0.00 0.00 43.62 4.18
5686 6262 2.034878 AGGAGATGCATAGCAACGAGA 58.965 47.619 0.00 0.00 43.62 4.04
5687 6263 2.035704 AGGAGATGCATAGCAACGAGAG 59.964 50.000 0.00 0.00 43.62 3.20
5688 6264 2.402305 GAGATGCATAGCAACGAGAGG 58.598 52.381 0.00 0.00 43.62 3.69
5689 6265 1.069823 AGATGCATAGCAACGAGAGGG 59.930 52.381 0.00 0.00 43.62 4.30
5690 6266 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
5691 6267 1.227674 GCATAGCAACGAGAGGGGG 60.228 63.158 0.00 0.00 0.00 5.40
5692 6268 1.686325 GCATAGCAACGAGAGGGGGA 61.686 60.000 0.00 0.00 0.00 4.81
5693 6269 0.390860 CATAGCAACGAGAGGGGGAG 59.609 60.000 0.00 0.00 0.00 4.30
5694 6270 0.261991 ATAGCAACGAGAGGGGGAGA 59.738 55.000 0.00 0.00 0.00 3.71
5695 6271 0.395862 TAGCAACGAGAGGGGGAGAG 60.396 60.000 0.00 0.00 0.00 3.20
5696 6272 1.985116 GCAACGAGAGGGGGAGAGT 60.985 63.158 0.00 0.00 0.00 3.24
5697 6273 1.893786 CAACGAGAGGGGGAGAGTG 59.106 63.158 0.00 0.00 0.00 3.51
5698 6274 0.900647 CAACGAGAGGGGGAGAGTGT 60.901 60.000 0.00 0.00 0.00 3.55
5699 6275 0.900647 AACGAGAGGGGGAGAGTGTG 60.901 60.000 0.00 0.00 0.00 3.82
5700 6276 1.304547 CGAGAGGGGGAGAGTGTGT 60.305 63.158 0.00 0.00 0.00 3.72
5701 6277 1.316706 CGAGAGGGGGAGAGTGTGTC 61.317 65.000 0.00 0.00 0.00 3.67
5702 6278 0.973496 GAGAGGGGGAGAGTGTGTCC 60.973 65.000 0.00 0.00 0.00 4.02
5703 6279 1.229209 GAGGGGGAGAGTGTGTCCA 60.229 63.158 0.00 0.00 35.57 4.02
5704 6280 1.536662 AGGGGGAGAGTGTGTCCAC 60.537 63.158 0.00 0.00 42.17 4.02
5705 6281 1.841556 GGGGGAGAGTGTGTCCACA 60.842 63.158 0.00 0.00 44.39 4.17
5706 6282 1.201429 GGGGGAGAGTGTGTCCACAT 61.201 60.000 3.07 0.00 44.39 3.21
5707 6283 1.568504 GGGGAGAGTGTGTCCACATA 58.431 55.000 3.07 0.00 44.39 2.29
5708 6284 1.207329 GGGGAGAGTGTGTCCACATAC 59.793 57.143 3.07 0.00 44.39 2.39
5709 6285 1.207329 GGGAGAGTGTGTCCACATACC 59.793 57.143 3.07 5.31 44.39 2.73
5710 6286 1.207329 GGAGAGTGTGTCCACATACCC 59.793 57.143 3.07 0.33 44.39 3.69
5711 6287 2.180276 GAGAGTGTGTCCACATACCCT 58.820 52.381 3.07 0.00 44.39 4.34
5712 6288 2.166664 GAGAGTGTGTCCACATACCCTC 59.833 54.545 3.07 5.67 44.39 4.30
5713 6289 0.895530 AGTGTGTCCACATACCCTCG 59.104 55.000 3.07 0.00 44.39 4.63
5714 6290 0.606604 GTGTGTCCACATACCCTCGT 59.393 55.000 3.07 0.00 43.97 4.18
5715 6291 1.820519 GTGTGTCCACATACCCTCGTA 59.179 52.381 3.07 0.00 43.97 3.43
5716 6292 2.097036 TGTGTCCACATACCCTCGTAG 58.903 52.381 0.00 0.00 36.21 3.51
5717 6293 2.291089 TGTGTCCACATACCCTCGTAGA 60.291 50.000 0.00 0.00 36.21 2.59
5718 6294 2.098770 GTGTCCACATACCCTCGTAGAC 59.901 54.545 0.00 0.00 0.00 2.59
5719 6295 1.680207 GTCCACATACCCTCGTAGACC 59.320 57.143 0.00 0.00 0.00 3.85
5720 6296 0.666913 CCACATACCCTCGTAGACCG 59.333 60.000 0.00 0.00 38.13 4.79
5721 6297 1.671979 CACATACCCTCGTAGACCGA 58.328 55.000 0.00 0.00 45.00 4.69
5722 6298 2.019249 CACATACCCTCGTAGACCGAA 58.981 52.381 0.00 0.00 46.75 4.30
5723 6299 2.424601 CACATACCCTCGTAGACCGAAA 59.575 50.000 0.00 0.00 46.75 3.46
5724 6300 2.686915 ACATACCCTCGTAGACCGAAAG 59.313 50.000 0.00 0.00 46.75 2.62
5725 6301 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
5726 6302 1.226603 CCCTCGTAGACCGAAAGCG 60.227 63.158 0.00 0.00 46.75 4.68
5753 6329 4.394099 GTTAACTTAACGCGGTTGATGT 57.606 40.909 12.47 0.00 0.00 3.06
5754 6330 5.514059 GTTAACTTAACGCGGTTGATGTA 57.486 39.130 12.47 0.00 0.00 2.29
5755 6331 5.544621 GTTAACTTAACGCGGTTGATGTAG 58.455 41.667 12.47 0.00 0.00 2.74
5756 6332 3.308438 ACTTAACGCGGTTGATGTAGT 57.692 42.857 12.47 0.00 0.00 2.73
5757 6333 3.248266 ACTTAACGCGGTTGATGTAGTC 58.752 45.455 12.47 0.00 0.00 2.59
5758 6334 1.898938 TAACGCGGTTGATGTAGTCG 58.101 50.000 12.47 0.00 0.00 4.18
5759 6335 0.241749 AACGCGGTTGATGTAGTCGA 59.758 50.000 12.47 0.00 0.00 4.20
5760 6336 0.241749 ACGCGGTTGATGTAGTCGAA 59.758 50.000 12.47 0.00 0.00 3.71
5761 6337 0.638746 CGCGGTTGATGTAGTCGAAC 59.361 55.000 0.00 0.00 0.00 3.95
5763 6339 1.973138 CGGTTGATGTAGTCGAACGT 58.027 50.000 0.00 0.00 44.71 3.99
5764 6340 1.909532 CGGTTGATGTAGTCGAACGTC 59.090 52.381 3.01 3.01 44.71 4.34
5765 6341 2.413765 CGGTTGATGTAGTCGAACGTCT 60.414 50.000 10.09 0.00 44.71 4.18
5766 6342 3.572584 GGTTGATGTAGTCGAACGTCTT 58.427 45.455 10.09 0.00 36.53 3.01
5767 6343 3.607209 GGTTGATGTAGTCGAACGTCTTC 59.393 47.826 10.09 4.37 36.53 2.87
5768 6344 4.474113 GTTGATGTAGTCGAACGTCTTCT 58.526 43.478 10.09 0.00 36.53 2.85
5769 6345 4.337985 TGATGTAGTCGAACGTCTTCTC 57.662 45.455 10.09 0.00 36.53 2.87
5770 6346 2.869358 TGTAGTCGAACGTCTTCTCG 57.131 50.000 0.97 0.97 36.39 4.04
5771 6347 2.407090 TGTAGTCGAACGTCTTCTCGA 58.593 47.619 5.99 5.99 41.54 4.04
5772 6348 2.802247 TGTAGTCGAACGTCTTCTCGAA 59.198 45.455 11.31 0.00 44.98 3.71
5773 6349 3.434641 TGTAGTCGAACGTCTTCTCGAAT 59.565 43.478 13.79 13.79 44.98 3.34
5774 6350 3.120182 AGTCGAACGTCTTCTCGAATC 57.880 47.619 11.31 1.46 44.98 2.52
5775 6351 2.483106 AGTCGAACGTCTTCTCGAATCA 59.517 45.455 11.31 0.00 44.98 2.57
5776 6352 3.058432 AGTCGAACGTCTTCTCGAATCAA 60.058 43.478 11.31 0.00 44.98 2.57
5777 6353 3.057869 GTCGAACGTCTTCTCGAATCAAC 59.942 47.826 11.31 0.00 44.98 3.18
5778 6354 2.341760 CGAACGTCTTCTCGAATCAACC 59.658 50.000 1.14 0.00 37.23 3.77
5779 6355 1.978542 ACGTCTTCTCGAATCAACCG 58.021 50.000 0.00 0.00 34.70 4.44
5780 6356 1.538512 ACGTCTTCTCGAATCAACCGA 59.461 47.619 0.00 0.00 34.70 4.69
5781 6357 2.163815 ACGTCTTCTCGAATCAACCGAT 59.836 45.455 0.00 0.00 35.35 4.18
5782 6358 2.784380 CGTCTTCTCGAATCAACCGATC 59.216 50.000 0.00 0.00 35.35 3.69
5783 6359 3.730963 CGTCTTCTCGAATCAACCGATCA 60.731 47.826 0.00 0.00 35.35 2.92
5784 6360 4.174009 GTCTTCTCGAATCAACCGATCAA 58.826 43.478 0.00 0.00 35.35 2.57
5785 6361 4.266502 GTCTTCTCGAATCAACCGATCAAG 59.733 45.833 0.00 0.00 35.35 3.02
5786 6362 3.868757 TCTCGAATCAACCGATCAAGT 57.131 42.857 0.00 0.00 35.35 3.16
5787 6363 4.976224 TCTCGAATCAACCGATCAAGTA 57.024 40.909 0.00 0.00 35.35 2.24
5788 6364 4.669318 TCTCGAATCAACCGATCAAGTAC 58.331 43.478 0.00 0.00 35.35 2.73
5789 6365 3.777478 TCGAATCAACCGATCAAGTACC 58.223 45.455 0.00 0.00 0.00 3.34
5790 6366 2.534349 CGAATCAACCGATCAAGTACCG 59.466 50.000 0.00 0.00 0.00 4.02
5791 6367 3.732774 CGAATCAACCGATCAAGTACCGA 60.733 47.826 0.00 0.00 0.00 4.69
5792 6368 3.880047 ATCAACCGATCAAGTACCGAA 57.120 42.857 0.00 0.00 0.00 4.30
5793 6369 2.950433 TCAACCGATCAAGTACCGAAC 58.050 47.619 0.00 0.00 0.00 3.95
5794 6370 1.652124 CAACCGATCAAGTACCGAACG 59.348 52.381 5.81 5.81 0.00 3.95
5795 6371 0.883833 ACCGATCAAGTACCGAACGT 59.116 50.000 10.35 0.00 0.00 3.99
5796 6372 2.083774 ACCGATCAAGTACCGAACGTA 58.916 47.619 10.35 0.00 0.00 3.57
5797 6373 2.159517 ACCGATCAAGTACCGAACGTAC 60.160 50.000 10.35 0.00 46.69 3.67
5803 6379 3.001576 GTACCGAACGTACGACACC 57.998 57.895 24.41 6.58 38.17 4.16
5804 6380 0.517316 GTACCGAACGTACGACACCT 59.483 55.000 24.41 3.55 38.17 4.00
5805 6381 1.069227 GTACCGAACGTACGACACCTT 60.069 52.381 24.41 4.81 38.17 3.50
5806 6382 0.040067 ACCGAACGTACGACACCTTC 60.040 55.000 24.41 13.51 35.09 3.46
5816 6392 3.588277 GACACCTTCGAGTTCTGCA 57.412 52.632 0.00 0.00 0.00 4.41
5817 6393 1.140816 GACACCTTCGAGTTCTGCAC 58.859 55.000 0.00 0.00 0.00 4.57
5818 6394 0.464036 ACACCTTCGAGTTCTGCACA 59.536 50.000 0.00 0.00 0.00 4.57
5819 6395 0.861837 CACCTTCGAGTTCTGCACAC 59.138 55.000 0.00 0.00 0.00 3.82
5820 6396 0.597637 ACCTTCGAGTTCTGCACACG 60.598 55.000 0.00 0.00 40.52 4.49
5821 6397 0.597637 CCTTCGAGTTCTGCACACGT 60.598 55.000 0.00 0.00 40.12 4.49
5822 6398 1.209128 CTTCGAGTTCTGCACACGTT 58.791 50.000 0.00 0.00 40.12 3.99
5823 6399 1.190323 CTTCGAGTTCTGCACACGTTC 59.810 52.381 0.00 0.00 40.12 3.95
5824 6400 0.101579 TCGAGTTCTGCACACGTTCA 59.898 50.000 0.00 0.00 40.12 3.18
5825 6401 0.504384 CGAGTTCTGCACACGTTCAG 59.496 55.000 0.00 0.00 35.01 3.02
5826 6402 0.233332 GAGTTCTGCACACGTTCAGC 59.767 55.000 4.78 1.26 0.00 4.26
5827 6403 0.179073 AGTTCTGCACACGTTCAGCT 60.179 50.000 5.40 0.00 0.00 4.24
5828 6404 0.233332 GTTCTGCACACGTTCAGCTC 59.767 55.000 5.40 0.00 0.00 4.09
5829 6405 1.215014 TTCTGCACACGTTCAGCTCG 61.215 55.000 5.40 0.00 0.00 5.03
5830 6406 1.661509 CTGCACACGTTCAGCTCGA 60.662 57.895 0.00 0.00 0.00 4.04
5831 6407 1.006220 TGCACACGTTCAGCTCGAT 60.006 52.632 0.00 0.00 0.00 3.59
5832 6408 1.284297 TGCACACGTTCAGCTCGATG 61.284 55.000 0.00 0.07 0.00 3.84
5833 6409 1.008875 GCACACGTTCAGCTCGATGA 61.009 55.000 0.00 0.00 0.00 2.92
5834 6410 0.710567 CACACGTTCAGCTCGATGAC 59.289 55.000 0.00 0.00 0.00 3.06
5835 6411 0.729478 ACACGTTCAGCTCGATGACG 60.729 55.000 0.00 4.93 41.26 4.35
5836 6412 0.729478 CACGTTCAGCTCGATGACGT 60.729 55.000 0.00 5.49 37.39 4.34
5837 6413 0.454620 ACGTTCAGCTCGATGACGTC 60.455 55.000 9.11 9.11 40.69 4.34
5838 6414 1.134530 CGTTCAGCTCGATGACGTCC 61.135 60.000 14.12 0.00 40.69 4.79
5839 6415 0.802607 GTTCAGCTCGATGACGTCCC 60.803 60.000 14.12 3.95 40.69 4.46
5840 6416 0.965866 TTCAGCTCGATGACGTCCCT 60.966 55.000 14.12 0.00 40.69 4.20
5841 6417 1.064946 CAGCTCGATGACGTCCCTC 59.935 63.158 14.12 9.05 40.69 4.30
5842 6418 2.024871 GCTCGATGACGTCCCTCG 59.975 66.667 23.88 23.88 46.00 4.63
5843 6419 2.470362 GCTCGATGACGTCCCTCGA 61.470 63.158 27.81 27.81 42.86 4.04
5844 6420 1.989966 GCTCGATGACGTCCCTCGAA 61.990 60.000 28.71 18.23 40.52 3.71
5845 6421 0.248134 CTCGATGACGTCCCTCGAAC 60.248 60.000 28.71 6.04 40.52 3.95
5846 6422 0.675837 TCGATGACGTCCCTCGAACT 60.676 55.000 27.70 0.60 42.86 3.01
5847 6423 0.248134 CGATGACGTCCCTCGAACTC 60.248 60.000 24.99 5.48 42.86 3.01
5848 6424 1.096416 GATGACGTCCCTCGAACTCT 58.904 55.000 14.12 0.00 42.86 3.24
5849 6425 1.473278 GATGACGTCCCTCGAACTCTT 59.527 52.381 14.12 0.00 42.86 2.85
5850 6426 0.596577 TGACGTCCCTCGAACTCTTG 59.403 55.000 14.12 0.00 42.86 3.02
5851 6427 0.879765 GACGTCCCTCGAACTCTTGA 59.120 55.000 3.51 0.00 42.86 3.02
5852 6428 1.473278 GACGTCCCTCGAACTCTTGAT 59.527 52.381 3.51 0.00 42.86 2.57
5853 6429 1.473278 ACGTCCCTCGAACTCTTGATC 59.527 52.381 0.00 0.00 42.86 2.92
5854 6430 1.746220 CGTCCCTCGAACTCTTGATCT 59.254 52.381 0.00 0.00 42.86 2.75
5855 6431 2.223386 CGTCCCTCGAACTCTTGATCTC 60.223 54.545 0.00 0.00 42.86 2.75
5856 6432 2.017782 TCCCTCGAACTCTTGATCTCG 58.982 52.381 0.00 0.00 0.00 4.04
5857 6433 1.746220 CCCTCGAACTCTTGATCTCGT 59.254 52.381 0.00 0.00 33.15 4.18
5858 6434 2.943690 CCCTCGAACTCTTGATCTCGTA 59.056 50.000 0.00 0.00 33.15 3.43
5859 6435 3.002862 CCCTCGAACTCTTGATCTCGTAG 59.997 52.174 0.00 0.00 33.15 3.51
5860 6436 3.872182 CCTCGAACTCTTGATCTCGTAGA 59.128 47.826 0.00 0.00 33.15 2.59
5878 6454 3.655615 AGAGGTACGAAGGAGATGAGT 57.344 47.619 0.00 0.00 0.00 3.41
5879 6455 3.970842 AGAGGTACGAAGGAGATGAGTT 58.029 45.455 0.00 0.00 0.00 3.01
5880 6456 3.949113 AGAGGTACGAAGGAGATGAGTTC 59.051 47.826 0.00 0.00 0.00 3.01
5881 6457 3.025262 AGGTACGAAGGAGATGAGTTCC 58.975 50.000 0.00 0.00 34.83 3.62
5882 6458 2.223525 GGTACGAAGGAGATGAGTTCCG 60.224 54.545 0.00 0.00 39.77 4.30
5883 6459 1.546961 ACGAAGGAGATGAGTTCCGT 58.453 50.000 0.00 0.00 39.77 4.69
5884 6460 1.473278 ACGAAGGAGATGAGTTCCGTC 59.527 52.381 0.00 0.00 39.77 4.79
5885 6461 1.472878 CGAAGGAGATGAGTTCCGTCA 59.527 52.381 7.73 0.00 41.49 4.35
5886 6462 2.478709 CGAAGGAGATGAGTTCCGTCAG 60.479 54.545 7.73 0.00 41.49 3.51
5887 6463 0.820871 AGGAGATGAGTTCCGTCAGC 59.179 55.000 0.00 0.00 39.77 4.26
5888 6464 0.532573 GGAGATGAGTTCCGTCAGCA 59.467 55.000 0.00 0.00 35.20 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 4.094887 TGCGCATCTTTCATCTTTAGGTTC 59.905 41.667 5.66 0.00 0.00 3.62
93 94 4.825546 ATGCGCATCTTTCATCTTTAGG 57.174 40.909 19.28 0.00 0.00 2.69
111 112 1.267806 CTGACCCACACAGACAAATGC 59.732 52.381 0.00 0.00 37.54 3.56
143 144 1.362406 GCTTTGCCTGTCTACGCTCC 61.362 60.000 0.00 0.00 0.00 4.70
147 148 1.588404 CGTATGCTTTGCCTGTCTACG 59.412 52.381 0.00 0.00 0.00 3.51
149 150 4.430007 CTTACGTATGCTTTGCCTGTCTA 58.570 43.478 0.00 0.00 0.00 2.59
209 210 1.878953 ACGAAGCGACATTTTCCTGT 58.121 45.000 0.00 0.00 0.00 4.00
398 399 1.229177 GCCTCCATGGTTGGGGTTT 60.229 57.895 21.82 0.00 42.59 3.27
425 426 3.521937 ACTACCCATTACAAGCAGCCTAA 59.478 43.478 0.00 0.00 0.00 2.69
426 427 3.112263 ACTACCCATTACAAGCAGCCTA 58.888 45.455 0.00 0.00 0.00 3.93
427 428 1.916181 ACTACCCATTACAAGCAGCCT 59.084 47.619 0.00 0.00 0.00 4.58
428 429 2.420058 ACTACCCATTACAAGCAGCC 57.580 50.000 0.00 0.00 0.00 4.85
430 431 6.874134 GGTATGATACTACCCATTACAAGCAG 59.126 42.308 2.24 0.00 36.00 4.24
431 432 6.557253 AGGTATGATACTACCCATTACAAGCA 59.443 38.462 2.24 0.00 41.87 3.91
432 433 7.005709 AGGTATGATACTACCCATTACAAGC 57.994 40.000 2.24 0.00 41.87 4.01
434 435 9.664777 ACTAAGGTATGATACTACCCATTACAA 57.335 33.333 2.24 0.00 41.87 2.41
480 481 7.182817 TGCATTATGGAGGTAGTATCATACC 57.817 40.000 0.00 0.00 44.81 2.73
481 482 9.155975 CTTTGCATTATGGAGGTAGTATCATAC 57.844 37.037 0.00 0.00 0.00 2.39
482 483 8.880244 ACTTTGCATTATGGAGGTAGTATCATA 58.120 33.333 0.00 0.00 0.00 2.15
483 484 7.749666 ACTTTGCATTATGGAGGTAGTATCAT 58.250 34.615 0.00 0.00 0.00 2.45
484 485 7.136822 ACTTTGCATTATGGAGGTAGTATCA 57.863 36.000 0.00 0.00 0.00 2.15
485 486 9.372369 GATACTTTGCATTATGGAGGTAGTATC 57.628 37.037 19.00 19.00 33.36 2.24
486 487 8.880244 TGATACTTTGCATTATGGAGGTAGTAT 58.120 33.333 13.49 13.49 29.04 2.12
487 488 8.257602 TGATACTTTGCATTATGGAGGTAGTA 57.742 34.615 0.00 1.83 0.00 1.82
488 489 7.136822 TGATACTTTGCATTATGGAGGTAGT 57.863 36.000 0.00 0.00 0.00 2.73
489 490 9.896645 ATATGATACTTTGCATTATGGAGGTAG 57.103 33.333 0.00 0.00 0.00 3.18
491 492 9.672673 GTATATGATACTTTGCATTATGGAGGT 57.327 33.333 0.00 0.00 0.00 3.85
492 493 9.896645 AGTATATGATACTTTGCATTATGGAGG 57.103 33.333 0.00 0.00 0.00 4.30
523 524 9.295825 CATGGCAATAAATAAGGTTACCTATGA 57.704 33.333 3.55 0.00 31.13 2.15
524 525 8.028938 GCATGGCAATAAATAAGGTTACCTATG 58.971 37.037 3.55 1.16 31.13 2.23
525 526 7.728083 TGCATGGCAATAAATAAGGTTACCTAT 59.272 33.333 3.55 0.00 34.76 2.57
526 527 7.063593 TGCATGGCAATAAATAAGGTTACCTA 58.936 34.615 3.55 0.00 34.76 3.08
527 528 5.896678 TGCATGGCAATAAATAAGGTTACCT 59.103 36.000 0.00 0.00 34.76 3.08
528 529 6.155475 TGCATGGCAATAAATAAGGTTACC 57.845 37.500 0.00 0.00 34.76 2.85
529 530 7.382218 GTCATGCATGGCAATAAATAAGGTTAC 59.618 37.037 26.04 6.91 43.62 2.50
530 531 7.069208 TGTCATGCATGGCAATAAATAAGGTTA 59.931 33.333 30.82 2.65 43.62 2.85
531 532 6.127111 TGTCATGCATGGCAATAAATAAGGTT 60.127 34.615 30.82 0.00 43.62 3.50
532 533 5.363292 TGTCATGCATGGCAATAAATAAGGT 59.637 36.000 30.82 0.00 43.62 3.50
533 534 5.693104 GTGTCATGCATGGCAATAAATAAGG 59.307 40.000 34.01 0.00 44.94 2.69
534 535 6.274579 TGTGTCATGCATGGCAATAAATAAG 58.725 36.000 34.01 0.13 44.94 1.73
535 536 6.218108 TGTGTCATGCATGGCAATAAATAA 57.782 33.333 34.01 7.61 44.94 1.40
536 537 5.848833 TGTGTCATGCATGGCAATAAATA 57.151 34.783 34.01 14.13 44.94 1.40
537 538 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
538 539 4.739587 ATGTGTCATGCATGGCAATAAA 57.260 36.364 34.01 20.14 44.94 1.40
539 540 4.888823 ACTATGTGTCATGCATGGCAATAA 59.111 37.500 34.01 22.53 44.94 1.40
540 541 4.463070 ACTATGTGTCATGCATGGCAATA 58.537 39.130 34.01 27.05 44.94 1.90
541 542 3.293337 ACTATGTGTCATGCATGGCAAT 58.707 40.909 34.01 27.34 44.94 3.56
542 543 2.725637 ACTATGTGTCATGCATGGCAA 58.274 42.857 34.01 23.37 44.94 4.52
543 544 2.423446 ACTATGTGTCATGCATGGCA 57.577 45.000 29.45 29.45 44.86 4.92
544 545 2.225019 GCTACTATGTGTCATGCATGGC 59.775 50.000 24.40 24.40 0.00 4.40
545 546 3.469739 TGCTACTATGTGTCATGCATGG 58.530 45.455 25.97 10.76 0.00 3.66
546 547 6.592607 TGATATGCTACTATGTGTCATGCATG 59.407 38.462 21.07 21.07 39.07 4.06
547 548 6.704310 TGATATGCTACTATGTGTCATGCAT 58.296 36.000 0.00 0.00 40.50 3.96
548 549 6.100404 TGATATGCTACTATGTGTCATGCA 57.900 37.500 0.00 0.00 35.34 3.96
549 550 7.606858 AATGATATGCTACTATGTGTCATGC 57.393 36.000 0.00 0.00 0.00 4.06
560 561 9.371136 CCGTATCATGTTAAATGATATGCTACT 57.629 33.333 15.70 0.00 42.42 2.57
561 562 9.151471 ACCGTATCATGTTAAATGATATGCTAC 57.849 33.333 15.70 3.09 42.42 3.58
563 564 9.890629 ATACCGTATCATGTTAAATGATATGCT 57.109 29.630 15.70 7.91 42.42 3.79
612 613 9.466497 AGTGGCATAGAATTAAATGAAGAAAGA 57.534 29.630 0.00 0.00 0.00 2.52
613 614 9.727627 GAGTGGCATAGAATTAAATGAAGAAAG 57.272 33.333 0.00 0.00 0.00 2.62
614 615 9.241919 TGAGTGGCATAGAATTAAATGAAGAAA 57.758 29.630 0.00 0.00 0.00 2.52
615 616 8.806429 TGAGTGGCATAGAATTAAATGAAGAA 57.194 30.769 0.00 0.00 0.00 2.52
616 617 7.012704 GCTGAGTGGCATAGAATTAAATGAAGA 59.987 37.037 0.00 0.00 0.00 2.87
617 618 7.137426 GCTGAGTGGCATAGAATTAAATGAAG 58.863 38.462 0.00 0.00 0.00 3.02
618 619 6.602803 TGCTGAGTGGCATAGAATTAAATGAA 59.397 34.615 0.00 0.00 37.29 2.57
619 620 6.121590 TGCTGAGTGGCATAGAATTAAATGA 58.878 36.000 0.00 0.00 37.29 2.57
620 621 6.381481 TGCTGAGTGGCATAGAATTAAATG 57.619 37.500 0.00 0.00 37.29 2.32
621 622 7.408756 TTTGCTGAGTGGCATAGAATTAAAT 57.591 32.000 0.00 0.00 42.09 1.40
622 623 6.832520 TTTGCTGAGTGGCATAGAATTAAA 57.167 33.333 0.00 0.00 42.09 1.52
623 624 6.832520 TTTTGCTGAGTGGCATAGAATTAA 57.167 33.333 0.00 0.00 42.09 1.40
624 625 7.775093 ACTATTTTGCTGAGTGGCATAGAATTA 59.225 33.333 0.00 0.00 42.09 1.40
625 626 5.927281 ATTTTGCTGAGTGGCATAGAATT 57.073 34.783 0.00 0.00 42.09 2.17
626 627 6.125029 ACTATTTTGCTGAGTGGCATAGAAT 58.875 36.000 0.00 0.00 42.09 2.40
627 628 5.500234 ACTATTTTGCTGAGTGGCATAGAA 58.500 37.500 0.00 0.00 42.09 2.10
628 629 5.102953 ACTATTTTGCTGAGTGGCATAGA 57.897 39.130 0.00 0.00 42.09 1.98
629 630 5.121811 AGACTATTTTGCTGAGTGGCATAG 58.878 41.667 0.00 0.00 42.09 2.23
630 631 5.102953 AGACTATTTTGCTGAGTGGCATA 57.897 39.130 0.00 0.00 42.09 3.14
631 632 3.960571 AGACTATTTTGCTGAGTGGCAT 58.039 40.909 0.00 0.00 42.09 4.40
632 633 3.423539 AGACTATTTTGCTGAGTGGCA 57.576 42.857 0.00 0.00 40.74 4.92
633 634 4.508662 ACTAGACTATTTTGCTGAGTGGC 58.491 43.478 0.00 0.00 0.00 5.01
634 635 5.352569 CCAACTAGACTATTTTGCTGAGTGG 59.647 44.000 0.00 0.00 0.00 4.00
635 636 5.163814 GCCAACTAGACTATTTTGCTGAGTG 60.164 44.000 0.00 0.00 0.00 3.51
636 637 4.938226 GCCAACTAGACTATTTTGCTGAGT 59.062 41.667 0.00 0.00 0.00 3.41
637 638 4.937620 TGCCAACTAGACTATTTTGCTGAG 59.062 41.667 0.00 0.00 0.00 3.35
638 639 4.905429 TGCCAACTAGACTATTTTGCTGA 58.095 39.130 0.00 0.00 0.00 4.26
639 640 5.575957 CATGCCAACTAGACTATTTTGCTG 58.424 41.667 0.00 3.50 0.00 4.41
640 641 4.096984 GCATGCCAACTAGACTATTTTGCT 59.903 41.667 6.36 0.00 0.00 3.91
641 642 4.142403 TGCATGCCAACTAGACTATTTTGC 60.142 41.667 16.68 2.67 0.00 3.68
642 643 5.565592 TGCATGCCAACTAGACTATTTTG 57.434 39.130 16.68 0.00 0.00 2.44
643 644 5.887598 TCATGCATGCCAACTAGACTATTTT 59.112 36.000 22.25 0.00 0.00 1.82
644 645 5.439721 TCATGCATGCCAACTAGACTATTT 58.560 37.500 22.25 0.00 0.00 1.40
645 646 5.039920 TCATGCATGCCAACTAGACTATT 57.960 39.130 22.25 0.00 0.00 1.73
646 647 4.694760 TCATGCATGCCAACTAGACTAT 57.305 40.909 22.25 0.00 0.00 2.12
647 648 4.694760 ATCATGCATGCCAACTAGACTA 57.305 40.909 22.25 0.00 0.00 2.59
648 649 3.572632 ATCATGCATGCCAACTAGACT 57.427 42.857 22.25 0.00 0.00 3.24
649 650 3.499918 GGTATCATGCATGCCAACTAGAC 59.500 47.826 22.25 10.57 37.22 2.59
650 651 3.136260 TGGTATCATGCATGCCAACTAGA 59.864 43.478 22.25 2.12 43.86 2.43
651 652 3.479489 TGGTATCATGCATGCCAACTAG 58.521 45.455 22.25 0.00 43.86 2.57
652 653 3.479489 CTGGTATCATGCATGCCAACTA 58.521 45.455 22.25 14.90 45.89 2.24
653 654 2.304092 CTGGTATCATGCATGCCAACT 58.696 47.619 22.25 6.33 45.89 3.16
654 655 1.269413 GCTGGTATCATGCATGCCAAC 60.269 52.381 22.25 17.38 45.89 3.77
655 656 1.034356 GCTGGTATCATGCATGCCAA 58.966 50.000 22.25 5.34 45.89 4.52
656 657 0.184211 AGCTGGTATCATGCATGCCA 59.816 50.000 22.25 20.66 44.57 4.92
657 658 2.189594 TAGCTGGTATCATGCATGCC 57.810 50.000 22.25 17.22 37.77 4.40
658 659 3.340928 TCATAGCTGGTATCATGCATGC 58.659 45.455 22.25 11.82 0.00 4.06
659 660 6.346896 AGTATCATAGCTGGTATCATGCATG 58.653 40.000 21.07 21.07 0.00 4.06
660 661 6.556974 AGTATCATAGCTGGTATCATGCAT 57.443 37.500 0.00 0.00 0.00 3.96
661 662 7.342799 TGATAGTATCATAGCTGGTATCATGCA 59.657 37.037 8.84 0.00 33.59 3.96
662 663 7.720442 TGATAGTATCATAGCTGGTATCATGC 58.280 38.462 8.84 0.00 33.59 4.06
677 678 5.077564 AGGCTGGTCGTAATGATAGTATCA 58.922 41.667 15.10 15.10 44.55 2.15
678 679 5.183331 TGAGGCTGGTCGTAATGATAGTATC 59.817 44.000 2.97 2.97 0.00 2.24
679 680 5.077564 TGAGGCTGGTCGTAATGATAGTAT 58.922 41.667 0.00 0.00 0.00 2.12
680 681 4.466827 TGAGGCTGGTCGTAATGATAGTA 58.533 43.478 0.00 0.00 0.00 1.82
681 682 3.296854 TGAGGCTGGTCGTAATGATAGT 58.703 45.455 0.00 0.00 0.00 2.12
682 683 3.858877 GCTGAGGCTGGTCGTAATGATAG 60.859 52.174 0.00 0.00 35.22 2.08
683 684 2.035961 GCTGAGGCTGGTCGTAATGATA 59.964 50.000 0.00 0.00 35.22 2.15
684 685 1.202580 GCTGAGGCTGGTCGTAATGAT 60.203 52.381 0.00 0.00 35.22 2.45
685 686 0.175760 GCTGAGGCTGGTCGTAATGA 59.824 55.000 0.00 0.00 35.22 2.57
686 687 1.148157 CGCTGAGGCTGGTCGTAATG 61.148 60.000 0.00 0.00 36.09 1.90
687 688 1.141881 CGCTGAGGCTGGTCGTAAT 59.858 57.895 0.00 0.00 36.09 1.89
688 689 2.571757 CGCTGAGGCTGGTCGTAA 59.428 61.111 0.00 0.00 36.09 3.18
689 690 4.129737 GCGCTGAGGCTGGTCGTA 62.130 66.667 0.00 0.00 36.09 3.43
691 692 4.749310 AAGCGCTGAGGCTGGTCG 62.749 66.667 12.58 0.00 43.93 4.79
692 693 2.817396 GAAGCGCTGAGGCTGGTC 60.817 66.667 12.58 0.00 43.93 4.02
693 694 4.749310 CGAAGCGCTGAGGCTGGT 62.749 66.667 12.58 0.00 43.93 4.00
813 814 6.096673 TCATTGCTCCTTTTCCCTTTTTAC 57.903 37.500 0.00 0.00 0.00 2.01
924 928 2.836293 TACCAGGAGGGAGGAGGGGA 62.836 65.000 0.00 0.00 41.15 4.81
1125 1374 4.671590 TCCGTGAGCGAGTCCCCA 62.672 66.667 0.00 0.00 41.33 4.96
1203 1452 0.458025 CGAAGAAGGTCTGGCCGTAC 60.458 60.000 0.00 0.00 43.70 3.67
1286 1535 5.182487 TGAGTGTATGTGTTTGTCTGTGTT 58.818 37.500 0.00 0.00 0.00 3.32
1351 1604 2.034879 CAGCGGGCGACATGAAACT 61.035 57.895 0.00 0.00 0.00 2.66
1387 1640 6.014242 TCTCTTTGAAGCAATGAAGTAGAGGA 60.014 38.462 0.00 0.00 29.50 3.71
1437 1690 4.476628 AAGCTAGGGAAATTTTGGCATG 57.523 40.909 0.00 0.00 0.00 4.06
1552 1812 6.631573 TTGAAGAGAAATCAAGAGCGTAGCG 61.632 44.000 0.00 0.00 44.65 4.26
1636 1896 4.504858 CAGGGAATGGGCGTATTATAGTC 58.495 47.826 0.00 0.00 0.00 2.59
1668 1928 1.302431 CATGTCCCTGTTGGCGTCA 60.302 57.895 0.00 0.00 0.00 4.35
1729 1989 3.215151 TGCAACCGGAAATACAGTTTGA 58.785 40.909 9.46 0.00 0.00 2.69
1764 2024 1.336125 GATGGAAGGCATGCTACTTGC 59.664 52.381 18.92 17.97 43.25 4.01
1784 2044 9.180678 ACAACTTCATTTTCGCATTACTAAAAG 57.819 29.630 0.00 0.00 0.00 2.27
1930 2192 9.993454 CAATTGTATATCTTCTGAAGGAGATGA 57.007 33.333 16.83 0.00 38.78 2.92
1984 2246 2.805671 GTTGACCACGTGATGATGTGAA 59.194 45.455 19.30 3.22 41.05 3.18
2023 2285 4.210328 GGTAAATGAAAACAAAAGCACCGG 59.790 41.667 0.00 0.00 0.00 5.28
2025 2287 6.918892 AAGGTAAATGAAAACAAAAGCACC 57.081 33.333 0.00 0.00 0.00 5.01
2272 2534 1.028868 GCTCATCAAGGGAGTGTGGC 61.029 60.000 0.00 0.00 34.83 5.01
2362 2624 6.883217 ACACAGAGATGAAGCATAACAGAAAT 59.117 34.615 0.00 0.00 0.00 2.17
2374 2636 2.497138 TGGTTGCACACAGAGATGAAG 58.503 47.619 0.00 0.00 0.00 3.02
2414 2676 8.950210 TGAGATCACTTGTTTTCTATTCATTCC 58.050 33.333 0.00 0.00 0.00 3.01
2524 2786 6.538381 TCAGATTTCGACTAATTGCAGCAATA 59.462 34.615 21.15 8.73 32.43 1.90
2598 2860 4.424061 TGGTTGAAATTTCGCTCTCATG 57.576 40.909 13.34 0.00 0.00 3.07
2599 2861 5.649782 ATTGGTTGAAATTTCGCTCTCAT 57.350 34.783 13.34 0.00 0.00 2.90
2665 2927 5.399013 GTGTATGCTGATTAAAACACCCAC 58.601 41.667 0.00 0.00 32.94 4.61
2726 3021 4.634004 TCACTCGTGAAAACAGTCAAATGT 59.366 37.500 0.00 0.00 36.53 2.71
2741 3036 6.400091 GCTGATTACTAAAACAGTCACTCGTG 60.400 42.308 0.00 0.00 37.70 4.35
2742 3037 5.634020 GCTGATTACTAAAACAGTCACTCGT 59.366 40.000 0.00 0.00 37.70 4.18
2743 3038 5.633601 TGCTGATTACTAAAACAGTCACTCG 59.366 40.000 0.00 0.00 37.70 4.18
2744 3039 7.602517 ATGCTGATTACTAAAACAGTCACTC 57.397 36.000 0.00 0.00 37.70 3.51
2745 3040 9.102757 CATATGCTGATTACTAAAACAGTCACT 57.897 33.333 0.00 0.00 37.70 3.41
2746 3041 7.852945 GCATATGCTGATTACTAAAACAGTCAC 59.147 37.037 20.64 0.00 37.70 3.67
2747 3042 7.012327 GGCATATGCTGATTACTAAAACAGTCA 59.988 37.037 26.12 0.00 37.70 3.41
2748 3043 7.012327 TGGCATATGCTGATTACTAAAACAGTC 59.988 37.037 26.12 4.51 37.70 3.51
2749 3044 6.828273 TGGCATATGCTGATTACTAAAACAGT 59.172 34.615 26.12 0.00 37.70 3.55
2750 3045 7.263100 TGGCATATGCTGATTACTAAAACAG 57.737 36.000 26.12 0.00 41.70 3.16
2751 3046 7.285172 ACATGGCATATGCTGATTACTAAAACA 59.715 33.333 26.12 11.60 41.70 2.83
2752 3047 7.651808 ACATGGCATATGCTGATTACTAAAAC 58.348 34.615 26.12 6.26 41.70 2.43
2753 3048 7.822161 ACATGGCATATGCTGATTACTAAAA 57.178 32.000 26.12 0.00 41.70 1.52
2754 3049 7.822161 AACATGGCATATGCTGATTACTAAA 57.178 32.000 26.12 1.57 41.70 1.85
2755 3050 7.936301 TGTAACATGGCATATGCTGATTACTAA 59.064 33.333 26.12 11.96 41.70 2.24
2756 3051 7.449247 TGTAACATGGCATATGCTGATTACTA 58.551 34.615 26.12 15.39 41.70 1.82
2757 3052 6.298361 TGTAACATGGCATATGCTGATTACT 58.702 36.000 26.12 8.66 41.70 2.24
2758 3053 6.558771 TGTAACATGGCATATGCTGATTAC 57.441 37.500 26.12 24.23 41.70 1.89
2759 3054 7.579761 TTTGTAACATGGCATATGCTGATTA 57.420 32.000 26.12 16.10 41.70 1.75
2770 3065 7.229707 AGTTACTACACATTTTGTAACATGGCA 59.770 33.333 14.49 0.00 43.96 4.92
2771 3066 7.590279 AGTTACTACACATTTTGTAACATGGC 58.410 34.615 14.49 0.00 43.96 4.40
2806 3101 9.953825 CACTCACGAAAATAGTAAACTATGTTC 57.046 33.333 17.69 17.69 44.26 3.18
2811 3106 7.327761 GCAGTCACTCACGAAAATAGTAAACTA 59.672 37.037 0.00 0.00 0.00 2.24
2812 3107 6.145696 GCAGTCACTCACGAAAATAGTAAACT 59.854 38.462 0.00 0.00 0.00 2.66
2813 3108 6.073980 TGCAGTCACTCACGAAAATAGTAAAC 60.074 38.462 0.00 0.00 0.00 2.01
2860 3155 5.708948 TCAACTTGGCAGTATGTTTTATGC 58.291 37.500 0.00 0.00 39.31 3.14
2869 3164 5.435686 TTCCAGTATCAACTTGGCAGTAT 57.564 39.130 0.00 0.00 31.97 2.12
2872 3167 4.946157 AGAATTCCAGTATCAACTTGGCAG 59.054 41.667 0.65 0.00 31.97 4.85
2895 3190 6.127196 GGTAATTTCAGACATGGGGCAAATTA 60.127 38.462 0.00 4.54 0.00 1.40
2903 3198 6.528537 TCATTTGGTAATTTCAGACATGGG 57.471 37.500 0.00 0.00 0.00 4.00
3055 3350 9.865321 CAAGGAAAAGTGATTTTGACATGATAT 57.135 29.630 0.00 0.00 0.00 1.63
3095 3390 6.072508 CCATTAGATGGTTGTAATCATTCCCG 60.073 42.308 0.00 0.00 45.54 5.14
3219 3514 1.562783 GCTCCCAGTAAGACCTCACT 58.437 55.000 0.00 0.00 0.00 3.41
3283 3578 1.136085 CGAATTTCTTCGCGCCAAGAA 60.136 47.619 23.68 23.68 46.76 2.52
3391 3686 4.577988 TTTAGCCACTTAATGCACCCTA 57.422 40.909 0.00 0.00 0.00 3.53
3413 3708 4.865925 CGATTGTGGTACTCGGTAAATTCA 59.134 41.667 0.00 0.00 0.00 2.57
3680 3975 9.431887 GTTGATGAACTGTAGTTAAGTATTGGA 57.568 33.333 0.00 0.00 38.56 3.53
3689 3984 8.185506 TCACTAAGGTTGATGAACTGTAGTTA 57.814 34.615 7.91 0.82 38.56 2.24
3781 4161 8.680039 ATGGCCATTTAATAATCATGGTTTTG 57.320 30.769 14.09 0.00 39.88 2.44
3785 4165 7.309990 GCACTATGGCCATTTAATAATCATGGT 60.310 37.037 26.37 0.00 39.88 3.55
3842 4222 4.756084 AACATGCTTTGTCAGAGTAAGC 57.244 40.909 8.80 8.80 43.44 3.09
4225 4710 0.472925 TGCAAGTCTGTGGTAGGGGA 60.473 55.000 0.00 0.00 0.00 4.81
4741 5313 1.142688 ACCCCAGCACTCCTTGGATT 61.143 55.000 0.00 0.00 0.00 3.01
4789 5361 2.454336 TGTACTCTCCATCCCGACAT 57.546 50.000 0.00 0.00 0.00 3.06
4960 5532 2.353208 GCTCACCACTTCTCTTCACGAT 60.353 50.000 0.00 0.00 0.00 3.73
5241 5815 5.860182 GCGCATAATACTATTACTTCGTCCA 59.140 40.000 0.30 0.00 0.00 4.02
5264 5839 1.805871 GCATCACTACCTGAGCAGAGC 60.806 57.143 0.00 0.00 30.20 4.09
5277 5852 6.239217 TGGTACTCAATTCATAGCATCACT 57.761 37.500 0.00 0.00 0.00 3.41
5289 5864 4.677182 AGAAATGCCCTTGGTACTCAATT 58.323 39.130 0.00 0.00 34.45 2.32
5358 5933 5.934935 TTCACGGATTTTTAACTCCTCAC 57.065 39.130 0.00 0.00 0.00 3.51
5392 5967 6.463995 TTTGGAGCTGAGTTAAATTTGTGT 57.536 33.333 0.00 0.00 0.00 3.72
5408 5983 2.548875 TGTTTGTGCACAATTTGGAGC 58.451 42.857 31.48 13.02 35.55 4.70
5409 5984 5.293814 TGAAATGTTTGTGCACAATTTGGAG 59.706 36.000 31.48 0.00 35.55 3.86
5480 6055 6.874134 GGGGTGTTATGAACTACTATGCATAG 59.126 42.308 28.38 28.38 36.46 2.23
5522 6098 9.425577 AGCTCAAAGTAAGTGTTTATCTAGTTC 57.574 33.333 0.00 0.00 0.00 3.01
5561 6137 9.704098 CTCATTTTAGGTTAAATTAGCTCGTTC 57.296 33.333 0.00 0.00 0.00 3.95
5564 6140 7.693952 TGCTCATTTTAGGTTAAATTAGCTCG 58.306 34.615 13.30 0.00 41.73 5.03
5572 6148 9.344772 TCAAACTACTGCTCATTTTAGGTTAAA 57.655 29.630 0.00 0.00 0.00 1.52
5573 6149 8.911918 TCAAACTACTGCTCATTTTAGGTTAA 57.088 30.769 0.00 0.00 0.00 2.01
5574 6150 8.154856 ACTCAAACTACTGCTCATTTTAGGTTA 58.845 33.333 0.00 0.00 0.00 2.85
5575 6151 6.998673 ACTCAAACTACTGCTCATTTTAGGTT 59.001 34.615 0.00 0.00 0.00 3.50
5576 6152 6.534634 ACTCAAACTACTGCTCATTTTAGGT 58.465 36.000 0.00 0.00 0.00 3.08
5577 6153 6.650807 TGACTCAAACTACTGCTCATTTTAGG 59.349 38.462 0.00 0.00 0.00 2.69
5578 6154 7.600375 TCTGACTCAAACTACTGCTCATTTTAG 59.400 37.037 0.00 0.00 0.00 1.85
5579 6155 7.441836 TCTGACTCAAACTACTGCTCATTTTA 58.558 34.615 0.00 0.00 0.00 1.52
5580 6156 6.291377 TCTGACTCAAACTACTGCTCATTTT 58.709 36.000 0.00 0.00 0.00 1.82
5581 6157 5.858381 TCTGACTCAAACTACTGCTCATTT 58.142 37.500 0.00 0.00 0.00 2.32
5582 6158 5.474578 TCTGACTCAAACTACTGCTCATT 57.525 39.130 0.00 0.00 0.00 2.57
5583 6159 5.474578 TTCTGACTCAAACTACTGCTCAT 57.525 39.130 0.00 0.00 0.00 2.90
5584 6160 4.937201 TTCTGACTCAAACTACTGCTCA 57.063 40.909 0.00 0.00 0.00 4.26
5585 6161 5.576384 CAGATTCTGACTCAAACTACTGCTC 59.424 44.000 8.00 0.00 32.44 4.26
5586 6162 5.011533 ACAGATTCTGACTCAAACTACTGCT 59.988 40.000 20.33 0.00 35.18 4.24
5587 6163 5.233988 ACAGATTCTGACTCAAACTACTGC 58.766 41.667 20.33 0.00 35.18 4.40
5588 6164 6.146837 CCAACAGATTCTGACTCAAACTACTG 59.853 42.308 20.33 0.00 35.18 2.74
5589 6165 6.226787 CCAACAGATTCTGACTCAAACTACT 58.773 40.000 20.33 0.00 35.18 2.57
5590 6166 5.409826 CCCAACAGATTCTGACTCAAACTAC 59.590 44.000 20.33 0.00 35.18 2.73
5591 6167 5.306937 TCCCAACAGATTCTGACTCAAACTA 59.693 40.000 20.33 0.00 35.18 2.24
5592 6168 4.103153 TCCCAACAGATTCTGACTCAAACT 59.897 41.667 20.33 0.00 35.18 2.66
5593 6169 4.389374 TCCCAACAGATTCTGACTCAAAC 58.611 43.478 20.33 0.00 35.18 2.93
5594 6170 4.705110 TCCCAACAGATTCTGACTCAAA 57.295 40.909 20.33 0.00 35.18 2.69
5595 6171 4.705110 TTCCCAACAGATTCTGACTCAA 57.295 40.909 20.33 3.72 35.18 3.02
5596 6172 4.389374 GTTTCCCAACAGATTCTGACTCA 58.611 43.478 20.33 0.00 35.18 3.41
5597 6173 3.433615 CGTTTCCCAACAGATTCTGACTC 59.566 47.826 20.33 1.76 35.18 3.36
5598 6174 3.181454 ACGTTTCCCAACAGATTCTGACT 60.181 43.478 20.33 4.12 35.18 3.41
5599 6175 3.139077 ACGTTTCCCAACAGATTCTGAC 58.861 45.455 20.33 5.17 35.18 3.51
5600 6176 3.485463 ACGTTTCCCAACAGATTCTGA 57.515 42.857 20.33 0.00 35.18 3.27
5601 6177 3.125316 GCTACGTTTCCCAACAGATTCTG 59.875 47.826 12.17 12.17 37.52 3.02
5602 6178 3.244422 TGCTACGTTTCCCAACAGATTCT 60.244 43.478 0.00 0.00 32.54 2.40
5603 6179 3.071479 TGCTACGTTTCCCAACAGATTC 58.929 45.455 0.00 0.00 32.54 2.52
5604 6180 3.134574 TGCTACGTTTCCCAACAGATT 57.865 42.857 0.00 0.00 32.54 2.40
5605 6181 2.851263 TGCTACGTTTCCCAACAGAT 57.149 45.000 0.00 0.00 32.54 2.90
5606 6182 2.422597 CATGCTACGTTTCCCAACAGA 58.577 47.619 0.00 0.00 32.54 3.41
5607 6183 1.135689 GCATGCTACGTTTCCCAACAG 60.136 52.381 11.37 0.00 32.54 3.16
5608 6184 0.878416 GCATGCTACGTTTCCCAACA 59.122 50.000 11.37 0.00 32.54 3.33
5609 6185 0.878416 TGCATGCTACGTTTCCCAAC 59.122 50.000 20.33 0.00 0.00 3.77
5610 6186 1.610363 TTGCATGCTACGTTTCCCAA 58.390 45.000 20.33 0.00 0.00 4.12
5611 6187 1.832883 ATTGCATGCTACGTTTCCCA 58.167 45.000 20.33 0.00 0.00 4.37
5612 6188 2.939460 AATTGCATGCTACGTTTCCC 57.061 45.000 20.33 0.00 0.00 3.97
5613 6189 3.832276 TGAAATTGCATGCTACGTTTCC 58.168 40.909 20.33 8.84 0.00 3.13
5614 6190 5.820926 TTTGAAATTGCATGCTACGTTTC 57.179 34.783 20.33 20.42 0.00 2.78
5615 6191 6.595772 TTTTTGAAATTGCATGCTACGTTT 57.404 29.167 20.33 13.51 0.00 3.60
5616 6192 6.783892 ATTTTTGAAATTGCATGCTACGTT 57.216 29.167 20.33 9.33 0.00 3.99
5617 6193 6.783892 AATTTTTGAAATTGCATGCTACGT 57.216 29.167 20.33 2.42 0.00 3.57
5618 6194 6.737750 GGAAATTTTTGAAATTGCATGCTACG 59.262 34.615 20.33 0.00 0.00 3.51
5619 6195 7.809665 AGGAAATTTTTGAAATTGCATGCTAC 58.190 30.769 20.33 6.26 0.00 3.58
5620 6196 7.982761 AGGAAATTTTTGAAATTGCATGCTA 57.017 28.000 20.33 12.49 0.00 3.49
5621 6197 6.887626 AGGAAATTTTTGAAATTGCATGCT 57.112 29.167 20.33 0.00 0.00 3.79
5622 6198 7.219344 GCATAGGAAATTTTTGAAATTGCATGC 59.781 33.333 11.82 11.82 0.00 4.06
5623 6199 8.455682 AGCATAGGAAATTTTTGAAATTGCATG 58.544 29.630 6.48 0.00 0.00 4.06
5624 6200 8.570068 AGCATAGGAAATTTTTGAAATTGCAT 57.430 26.923 6.48 2.43 0.00 3.96
5625 6201 7.660617 TGAGCATAGGAAATTTTTGAAATTGCA 59.339 29.630 6.48 0.00 0.00 4.08
5626 6202 7.959109 GTGAGCATAGGAAATTTTTGAAATTGC 59.041 33.333 0.00 0.00 0.00 3.56
5627 6203 8.164153 CGTGAGCATAGGAAATTTTTGAAATTG 58.836 33.333 0.00 0.00 0.00 2.32
5628 6204 8.243289 CGTGAGCATAGGAAATTTTTGAAATT 57.757 30.769 0.00 0.00 0.00 1.82
5629 6205 7.816945 CGTGAGCATAGGAAATTTTTGAAAT 57.183 32.000 0.00 0.00 0.00 2.17
5647 6223 7.943277 CATCTCCTATATAGATCTTGCGTGAGC 60.943 44.444 11.53 0.00 44.14 4.26
5648 6224 6.993786 TCTCCTATATAGATCTTGCGTGAG 57.006 41.667 11.53 6.03 0.00 3.51
5649 6225 6.183360 GCATCTCCTATATAGATCTTGCGTGA 60.183 42.308 11.53 0.18 31.22 4.35
5650 6226 5.976534 GCATCTCCTATATAGATCTTGCGTG 59.023 44.000 11.53 1.22 31.22 5.34
5651 6227 5.654209 TGCATCTCCTATATAGATCTTGCGT 59.346 40.000 11.53 0.00 31.22 5.24
5652 6228 6.141560 TGCATCTCCTATATAGATCTTGCG 57.858 41.667 11.53 0.00 31.22 4.85
5653 6229 7.814107 GCTATGCATCTCCTATATAGATCTTGC 59.186 40.741 11.53 13.83 31.22 4.01
5654 6230 8.858094 TGCTATGCATCTCCTATATAGATCTTG 58.142 37.037 11.53 5.13 31.71 3.02
5655 6231 9.431690 TTGCTATGCATCTCCTATATAGATCTT 57.568 33.333 11.53 0.00 38.76 2.40
5656 6232 8.859090 GTTGCTATGCATCTCCTATATAGATCT 58.141 37.037 11.53 0.00 38.76 2.75
5657 6233 7.807433 CGTTGCTATGCATCTCCTATATAGATC 59.193 40.741 11.53 0.00 38.76 2.75
5658 6234 7.503902 TCGTTGCTATGCATCTCCTATATAGAT 59.496 37.037 11.53 0.00 38.76 1.98
5659 6235 6.828785 TCGTTGCTATGCATCTCCTATATAGA 59.171 38.462 11.53 0.00 38.76 1.98
5660 6236 7.012799 TCTCGTTGCTATGCATCTCCTATATAG 59.987 40.741 0.19 2.46 38.76 1.31
5661 6237 6.828785 TCTCGTTGCTATGCATCTCCTATATA 59.171 38.462 0.19 0.00 38.76 0.86
5662 6238 5.654209 TCTCGTTGCTATGCATCTCCTATAT 59.346 40.000 0.19 0.00 38.76 0.86
5663 6239 5.010282 TCTCGTTGCTATGCATCTCCTATA 58.990 41.667 0.19 0.00 38.76 1.31
5664 6240 3.829026 TCTCGTTGCTATGCATCTCCTAT 59.171 43.478 0.19 0.00 38.76 2.57
5665 6241 3.222603 TCTCGTTGCTATGCATCTCCTA 58.777 45.455 0.19 0.00 38.76 2.94
5666 6242 2.034878 TCTCGTTGCTATGCATCTCCT 58.965 47.619 0.19 0.00 38.76 3.69
5667 6243 2.402305 CTCTCGTTGCTATGCATCTCC 58.598 52.381 0.19 0.00 38.76 3.71
5668 6244 2.402305 CCTCTCGTTGCTATGCATCTC 58.598 52.381 0.19 0.00 38.76 2.75
5669 6245 1.069823 CCCTCTCGTTGCTATGCATCT 59.930 52.381 0.19 0.00 38.76 2.90
5670 6246 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
5671 6247 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
5672 6248 1.522092 CCCCTCTCGTTGCTATGCA 59.478 57.895 0.00 0.00 36.47 3.96
5673 6249 1.227674 CCCCCTCTCGTTGCTATGC 60.228 63.158 0.00 0.00 0.00 3.14
5674 6250 0.390860 CTCCCCCTCTCGTTGCTATG 59.609 60.000 0.00 0.00 0.00 2.23
5675 6251 0.261991 TCTCCCCCTCTCGTTGCTAT 59.738 55.000 0.00 0.00 0.00 2.97
5676 6252 0.395862 CTCTCCCCCTCTCGTTGCTA 60.396 60.000 0.00 0.00 0.00 3.49
5677 6253 1.684049 CTCTCCCCCTCTCGTTGCT 60.684 63.158 0.00 0.00 0.00 3.91
5678 6254 1.985116 ACTCTCCCCCTCTCGTTGC 60.985 63.158 0.00 0.00 0.00 4.17
5679 6255 0.900647 ACACTCTCCCCCTCTCGTTG 60.901 60.000 0.00 0.00 0.00 4.10
5680 6256 0.900647 CACACTCTCCCCCTCTCGTT 60.901 60.000 0.00 0.00 0.00 3.85
5681 6257 1.304547 CACACTCTCCCCCTCTCGT 60.305 63.158 0.00 0.00 0.00 4.18
5682 6258 1.304547 ACACACTCTCCCCCTCTCG 60.305 63.158 0.00 0.00 0.00 4.04
5683 6259 0.973496 GGACACACTCTCCCCCTCTC 60.973 65.000 0.00 0.00 0.00 3.20
5684 6260 1.079438 GGACACACTCTCCCCCTCT 59.921 63.158 0.00 0.00 0.00 3.69
5685 6261 1.229209 TGGACACACTCTCCCCCTC 60.229 63.158 0.00 0.00 0.00 4.30
5686 6262 1.536662 GTGGACACACTCTCCCCCT 60.537 63.158 0.00 0.00 44.29 4.79
5687 6263 3.069778 GTGGACACACTCTCCCCC 58.930 66.667 0.00 0.00 44.29 5.40
5695 6271 0.606604 ACGAGGGTATGTGGACACAC 59.393 55.000 7.37 0.00 45.05 3.82
5696 6272 2.097036 CTACGAGGGTATGTGGACACA 58.903 52.381 7.68 7.68 46.44 3.72
5697 6273 2.098770 GTCTACGAGGGTATGTGGACAC 59.901 54.545 4.32 0.00 43.55 3.67
5698 6274 2.372264 GTCTACGAGGGTATGTGGACA 58.628 52.381 4.32 0.00 43.55 4.02
5699 6275 1.680207 GGTCTACGAGGGTATGTGGAC 59.320 57.143 0.00 0.87 43.42 4.02
5700 6276 2.062971 GGTCTACGAGGGTATGTGGA 57.937 55.000 0.00 0.00 0.00 4.02
5719 6295 0.788391 AGTTAACGCTTCCGCTTTCG 59.212 50.000 0.00 0.00 38.22 3.46
5720 6296 2.963498 AAGTTAACGCTTCCGCTTTC 57.037 45.000 0.00 0.00 38.22 2.62
5721 6297 4.137849 GTTAAGTTAACGCTTCCGCTTT 57.862 40.909 9.92 0.00 38.22 3.51
5722 6298 3.800929 GTTAAGTTAACGCTTCCGCTT 57.199 42.857 9.92 0.00 38.22 4.68
5732 6308 4.394099 ACATCAACCGCGTTAAGTTAAC 57.606 40.909 14.65 14.65 35.37 2.01
5733 6309 5.229423 ACTACATCAACCGCGTTAAGTTAA 58.771 37.500 4.92 0.00 0.00 2.01
5734 6310 4.808558 ACTACATCAACCGCGTTAAGTTA 58.191 39.130 4.92 0.00 0.00 2.24
5735 6311 3.656559 ACTACATCAACCGCGTTAAGTT 58.343 40.909 4.92 0.00 0.00 2.66
5736 6312 3.248266 GACTACATCAACCGCGTTAAGT 58.752 45.455 4.92 0.00 0.00 2.24
5737 6313 2.278094 CGACTACATCAACCGCGTTAAG 59.722 50.000 4.92 0.00 0.00 1.85
5738 6314 2.095314 TCGACTACATCAACCGCGTTAA 60.095 45.455 4.92 0.00 0.00 2.01
5739 6315 1.468127 TCGACTACATCAACCGCGTTA 59.532 47.619 4.92 0.00 0.00 3.18
5740 6316 0.241749 TCGACTACATCAACCGCGTT 59.758 50.000 4.92 0.00 0.00 4.84
5741 6317 0.241749 TTCGACTACATCAACCGCGT 59.758 50.000 4.92 0.00 0.00 6.01
5742 6318 0.638746 GTTCGACTACATCAACCGCG 59.361 55.000 0.00 0.00 0.00 6.46
5743 6319 0.638746 CGTTCGACTACATCAACCGC 59.361 55.000 0.00 0.00 0.00 5.68
5744 6320 1.909532 GACGTTCGACTACATCAACCG 59.090 52.381 0.00 0.00 0.00 4.44
5745 6321 3.213249 AGACGTTCGACTACATCAACC 57.787 47.619 0.00 0.00 0.00 3.77
5746 6322 4.474113 AGAAGACGTTCGACTACATCAAC 58.526 43.478 0.00 0.00 37.79 3.18
5747 6323 4.668431 CGAGAAGACGTTCGACTACATCAA 60.668 45.833 1.14 0.00 39.06 2.57
5748 6324 3.181523 CGAGAAGACGTTCGACTACATCA 60.182 47.826 1.14 0.00 39.06 3.07
5749 6325 3.061831 TCGAGAAGACGTTCGACTACATC 59.938 47.826 5.99 0.00 40.55 3.06
5750 6326 2.998670 TCGAGAAGACGTTCGACTACAT 59.001 45.455 5.99 0.00 40.55 2.29
5751 6327 2.407090 TCGAGAAGACGTTCGACTACA 58.593 47.619 5.99 0.00 40.55 2.74
5752 6328 3.446184 TTCGAGAAGACGTTCGACTAC 57.554 47.619 9.44 0.00 44.58 2.73
5753 6329 3.681417 TGATTCGAGAAGACGTTCGACTA 59.319 43.478 9.44 0.00 44.58 2.59
5754 6330 2.483106 TGATTCGAGAAGACGTTCGACT 59.517 45.455 9.44 4.88 44.58 4.18
5755 6331 2.847901 TGATTCGAGAAGACGTTCGAC 58.152 47.619 9.44 1.08 44.58 4.20
5756 6332 3.231965 GTTGATTCGAGAAGACGTTCGA 58.768 45.455 5.99 5.99 43.38 3.71
5757 6333 2.341760 GGTTGATTCGAGAAGACGTTCG 59.658 50.000 0.97 0.97 37.79 3.95
5758 6334 2.341760 CGGTTGATTCGAGAAGACGTTC 59.658 50.000 0.00 0.00 34.70 3.95
5759 6335 2.030540 TCGGTTGATTCGAGAAGACGTT 60.031 45.455 0.00 0.00 32.51 3.99
5760 6336 1.538512 TCGGTTGATTCGAGAAGACGT 59.461 47.619 0.00 0.00 32.51 4.34
5761 6337 2.257974 TCGGTTGATTCGAGAAGACG 57.742 50.000 0.00 0.00 32.51 4.18
5762 6338 3.770666 TGATCGGTTGATTCGAGAAGAC 58.229 45.455 0.00 0.00 40.09 3.01
5763 6339 4.082190 ACTTGATCGGTTGATTCGAGAAGA 60.082 41.667 12.06 0.00 40.09 2.87
5764 6340 4.177026 ACTTGATCGGTTGATTCGAGAAG 58.823 43.478 0.00 0.00 40.09 2.85
5765 6341 4.188247 ACTTGATCGGTTGATTCGAGAA 57.812 40.909 0.00 0.00 40.09 2.87
5766 6342 3.868757 ACTTGATCGGTTGATTCGAGA 57.131 42.857 0.00 0.00 40.09 4.04
5767 6343 3.797256 GGTACTTGATCGGTTGATTCGAG 59.203 47.826 0.00 0.00 40.09 4.04
5768 6344 3.732774 CGGTACTTGATCGGTTGATTCGA 60.733 47.826 0.00 0.00 41.04 3.71
5769 6345 2.534349 CGGTACTTGATCGGTTGATTCG 59.466 50.000 0.00 0.00 34.09 3.34
5770 6346 3.777478 TCGGTACTTGATCGGTTGATTC 58.223 45.455 0.00 0.00 34.09 2.52
5771 6347 3.880047 TCGGTACTTGATCGGTTGATT 57.120 42.857 0.00 0.00 34.09 2.57
5772 6348 3.518590 GTTCGGTACTTGATCGGTTGAT 58.481 45.455 0.00 0.00 37.60 2.57
5773 6349 2.669113 CGTTCGGTACTTGATCGGTTGA 60.669 50.000 9.70 0.00 30.29 3.18
5774 6350 1.652124 CGTTCGGTACTTGATCGGTTG 59.348 52.381 9.70 0.00 30.29 3.77
5775 6351 1.270550 ACGTTCGGTACTTGATCGGTT 59.729 47.619 17.26 2.38 33.92 4.44
5776 6352 0.883833 ACGTTCGGTACTTGATCGGT 59.116 50.000 17.26 0.00 33.92 4.69
5777 6353 2.444351 GTACGTTCGGTACTTGATCGG 58.556 52.381 17.26 0.00 46.50 4.18
5785 6361 0.517316 AGGTGTCGTACGTTCGGTAC 59.483 55.000 16.05 12.81 46.54 3.34
5786 6362 1.196808 GAAGGTGTCGTACGTTCGGTA 59.803 52.381 16.05 1.40 42.27 4.02
5787 6363 0.040067 GAAGGTGTCGTACGTTCGGT 60.040 55.000 16.05 0.00 42.27 4.69
5788 6364 2.716988 GAAGGTGTCGTACGTTCGG 58.283 57.895 16.05 0.00 42.27 4.30
5798 6374 1.140816 GTGCAGAACTCGAAGGTGTC 58.859 55.000 0.00 0.00 0.00 3.67
5799 6375 0.464036 TGTGCAGAACTCGAAGGTGT 59.536 50.000 0.00 0.00 0.00 4.16
5800 6376 0.861837 GTGTGCAGAACTCGAAGGTG 59.138 55.000 0.00 0.00 0.00 4.00
5801 6377 0.597637 CGTGTGCAGAACTCGAAGGT 60.598 55.000 0.00 0.00 46.19 3.50
5802 6378 0.597637 ACGTGTGCAGAACTCGAAGG 60.598 55.000 10.05 0.00 46.19 3.46
5803 6379 1.190323 GAACGTGTGCAGAACTCGAAG 59.810 52.381 10.05 0.00 46.19 3.79
5804 6380 1.205657 GAACGTGTGCAGAACTCGAA 58.794 50.000 10.05 0.00 46.19 3.71
5805 6381 0.101579 TGAACGTGTGCAGAACTCGA 59.898 50.000 10.05 0.00 46.19 4.04
5807 6383 0.233332 GCTGAACGTGTGCAGAACTC 59.767 55.000 12.25 0.00 34.06 3.01
5808 6384 0.179073 AGCTGAACGTGTGCAGAACT 60.179 50.000 12.25 0.00 34.06 3.01
5809 6385 0.233332 GAGCTGAACGTGTGCAGAAC 59.767 55.000 12.25 1.20 34.06 3.01
5810 6386 1.215014 CGAGCTGAACGTGTGCAGAA 61.215 55.000 12.25 0.00 34.06 3.02
5811 6387 1.661509 CGAGCTGAACGTGTGCAGA 60.662 57.895 12.25 0.00 34.06 4.26
5812 6388 1.010935 ATCGAGCTGAACGTGTGCAG 61.011 55.000 3.48 3.48 35.28 4.41
5813 6389 1.006220 ATCGAGCTGAACGTGTGCA 60.006 52.632 0.00 0.00 0.00 4.57
5814 6390 1.008875 TCATCGAGCTGAACGTGTGC 61.009 55.000 0.00 0.00 0.00 4.57
5815 6391 0.710567 GTCATCGAGCTGAACGTGTG 59.289 55.000 0.00 0.00 0.00 3.82
5816 6392 0.729478 CGTCATCGAGCTGAACGTGT 60.729 55.000 0.00 0.00 39.71 4.49
5817 6393 0.729478 ACGTCATCGAGCTGAACGTG 60.729 55.000 12.23 3.66 40.62 4.49
5818 6394 0.454620 GACGTCATCGAGCTGAACGT 60.455 55.000 11.55 12.62 40.62 3.99
5819 6395 1.134530 GGACGTCATCGAGCTGAACG 61.135 60.000 18.91 0.00 40.62 3.95
5820 6396 0.802607 GGGACGTCATCGAGCTGAAC 60.803 60.000 18.91 0.00 40.62 3.18
5821 6397 0.965866 AGGGACGTCATCGAGCTGAA 60.966 55.000 18.91 0.00 40.62 3.02
5822 6398 1.377366 GAGGGACGTCATCGAGCTGA 61.377 60.000 18.91 0.00 40.62 4.26
5823 6399 1.064946 GAGGGACGTCATCGAGCTG 59.935 63.158 18.91 0.00 40.62 4.24
5824 6400 2.473760 CGAGGGACGTCATCGAGCT 61.474 63.158 28.32 3.30 38.72 4.09
5825 6401 1.989966 TTCGAGGGACGTCATCGAGC 61.990 60.000 30.77 10.93 45.23 5.03
5826 6402 0.248134 GTTCGAGGGACGTCATCGAG 60.248 60.000 30.77 16.93 45.23 4.04
5827 6403 0.675837 AGTTCGAGGGACGTCATCGA 60.676 55.000 29.82 29.82 43.19 3.59
5828 6404 0.248134 GAGTTCGAGGGACGTCATCG 60.248 60.000 27.08 27.08 43.13 3.84
5829 6405 1.096416 AGAGTTCGAGGGACGTCATC 58.904 55.000 18.91 13.48 43.13 2.92
5830 6406 1.202582 CAAGAGTTCGAGGGACGTCAT 59.797 52.381 18.91 4.87 43.13 3.06
5831 6407 0.596577 CAAGAGTTCGAGGGACGTCA 59.403 55.000 18.91 0.00 43.13 4.35
5832 6408 0.879765 TCAAGAGTTCGAGGGACGTC 59.120 55.000 7.13 7.13 43.13 4.34
5833 6409 1.473278 GATCAAGAGTTCGAGGGACGT 59.527 52.381 0.00 0.00 43.13 4.34
5834 6410 1.746220 AGATCAAGAGTTCGAGGGACG 59.254 52.381 0.00 0.00 44.09 4.79
5835 6411 2.223386 CGAGATCAAGAGTTCGAGGGAC 60.223 54.545 0.00 0.00 35.19 4.46
5836 6412 2.017782 CGAGATCAAGAGTTCGAGGGA 58.982 52.381 0.00 0.00 35.19 4.20
5837 6413 1.746220 ACGAGATCAAGAGTTCGAGGG 59.254 52.381 6.78 0.00 36.89 4.30
5838 6414 3.872182 TCTACGAGATCAAGAGTTCGAGG 59.128 47.826 6.78 0.43 36.89 4.63
5839 6415 4.025229 CCTCTACGAGATCAAGAGTTCGAG 60.025 50.000 6.78 5.04 35.93 4.04
5840 6416 3.872182 CCTCTACGAGATCAAGAGTTCGA 59.128 47.826 6.78 0.00 35.93 3.71
5841 6417 3.623960 ACCTCTACGAGATCAAGAGTTCG 59.376 47.826 0.00 0.00 35.93 3.95
5842 6418 6.051646 GTACCTCTACGAGATCAAGAGTTC 57.948 45.833 0.00 0.00 35.93 3.01
5855 6431 3.464907 TCATCTCCTTCGTACCTCTACG 58.535 50.000 0.00 0.00 46.10 3.51
5856 6432 4.453751 ACTCATCTCCTTCGTACCTCTAC 58.546 47.826 0.00 0.00 0.00 2.59
5857 6433 4.774660 ACTCATCTCCTTCGTACCTCTA 57.225 45.455 0.00 0.00 0.00 2.43
5858 6434 3.655615 ACTCATCTCCTTCGTACCTCT 57.344 47.619 0.00 0.00 0.00 3.69
5859 6435 3.067040 GGAACTCATCTCCTTCGTACCTC 59.933 52.174 0.00 0.00 0.00 3.85
5860 6436 3.025262 GGAACTCATCTCCTTCGTACCT 58.975 50.000 0.00 0.00 0.00 3.08
5861 6437 2.223525 CGGAACTCATCTCCTTCGTACC 60.224 54.545 0.00 0.00 0.00 3.34
5862 6438 2.422832 ACGGAACTCATCTCCTTCGTAC 59.577 50.000 0.00 0.00 0.00 3.67
5863 6439 2.681848 GACGGAACTCATCTCCTTCGTA 59.318 50.000 0.00 0.00 0.00 3.43
5864 6440 1.473278 GACGGAACTCATCTCCTTCGT 59.527 52.381 0.00 0.00 0.00 3.85
5865 6441 1.472878 TGACGGAACTCATCTCCTTCG 59.527 52.381 0.00 0.00 34.69 3.79
5866 6442 2.737039 GCTGACGGAACTCATCTCCTTC 60.737 54.545 0.00 0.00 33.02 3.46
5867 6443 1.205893 GCTGACGGAACTCATCTCCTT 59.794 52.381 0.00 0.00 0.00 3.36
5868 6444 0.820871 GCTGACGGAACTCATCTCCT 59.179 55.000 0.00 0.00 0.00 3.69
5869 6445 0.532573 TGCTGACGGAACTCATCTCC 59.467 55.000 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.