Multiple sequence alignment - TraesCS3B01G249500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G249500 chr3B 100.000 4246 0 0 1 4246 397661442 397665687 0.000000e+00 7841
1 TraesCS3B01G249500 chr3B 100.000 2296 0 0 4463 6758 397665904 397668199 0.000000e+00 4241
2 TraesCS3B01G249500 chr3B 78.138 247 38 11 3678 3913 42700087 42700328 7.060000e-30 143
3 TraesCS3B01G249500 chr3A 93.593 3590 131 45 704 4244 402080873 402084412 0.000000e+00 5264
4 TraesCS3B01G249500 chr3A 94.911 1906 60 13 4465 6343 402084512 402086407 0.000000e+00 2948
5 TraesCS3B01G249500 chr3A 95.618 251 9 1 6313 6563 402086433 402086681 1.060000e-107 401
6 TraesCS3B01G249500 chr3A 91.176 204 12 3 6555 6758 402087111 402087308 8.640000e-69 272
7 TraesCS3B01G249500 chr3D 94.402 2501 95 21 697 3184 321888707 321886239 0.000000e+00 3801
8 TraesCS3B01G249500 chr3D 95.643 2318 59 15 4465 6758 321884645 321882346 0.000000e+00 3683
9 TraesCS3B01G249500 chr3D 96.262 1070 28 2 3182 4239 321886038 321884969 0.000000e+00 1744
10 TraesCS3B01G249500 chr2B 85.185 162 11 5 3756 3916 210455080 210454931 3.260000e-33 154
11 TraesCS3B01G249500 chr2D 84.663 163 11 5 3756 3916 152095894 152095744 4.220000e-32 150
12 TraesCS3B01G249500 chr4A 80.203 197 25 6 3678 3862 683500760 683500954 1.180000e-27 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G249500 chr3B 397661442 397668199 6757 False 6041.00 7841 100.000000 1 6758 2 chr3B.!!$F2 6757
1 TraesCS3B01G249500 chr3A 402080873 402087308 6435 False 2221.25 5264 93.824500 704 6758 4 chr3A.!!$F1 6054
2 TraesCS3B01G249500 chr3D 321882346 321888707 6361 True 3076.00 3801 95.435667 697 6758 3 chr3D.!!$R1 6061

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.035630 GAGGCATCACAAGCTGAGGT 60.036 55.000 0.00 0.00 32.93 3.85 F
622 623 0.038310 GAGGGAGAGGTGGGGTTTTG 59.962 60.000 0.00 0.00 0.00 2.44 F
873 884 0.179084 CCGCATACCATCCGTCTTGT 60.179 55.000 0.00 0.00 0.00 3.16 F
2615 2655 0.248949 GTACGGCCAGCAGTAGTAGC 60.249 60.000 2.24 0.00 0.00 3.58 F
2897 2937 0.107456 CTCTGTGAGTGGTGGCTGTT 59.893 55.000 0.00 0.00 0.00 3.16 F
2938 2978 0.308376 GAGGTGGAGTCGACTATCGC 59.692 60.000 20.09 18.91 40.21 4.58 F
3361 3609 0.752658 TCCTGGCTCATACGGTCATG 59.247 55.000 0.00 0.00 0.00 3.07 F
4538 4896 1.067916 CGCATTATTTGGGCCAGCC 59.932 57.895 6.23 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1133 1147 0.032017 GGCCTTACCAGAGAGGAGGA 60.032 60.0 0.00 0.0 41.22 3.71 R
2128 2165 0.188342 ACTGGAGGGTTGCCAAACAT 59.812 50.0 0.00 0.0 38.10 2.71 R
2649 2689 0.169672 CAGCGGGAACTTTGATGCTG 59.830 55.0 0.00 0.0 43.08 4.41 R
3778 4028 0.617820 TCTGTTAGAGGGAGGGGTGC 60.618 60.0 0.00 0.0 0.00 5.01 R
4462 4722 1.549203 TCTGCATTTTCCCCTCTTGC 58.451 50.0 0.00 0.0 0.00 4.01 R
4502 4860 1.643868 CGTCTCTCTCTCACGCAGCT 61.644 60.0 0.00 0.0 0.00 4.24 R
5135 5499 0.717224 GCAATGCAATGGAAACTGCG 59.283 50.0 3.49 0.0 41.63 5.18 R
6489 6924 0.322322 CCCAACTTGCCATGCAACAT 59.678 50.0 0.00 0.0 43.99 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.944871 CACAACTTGTTGGTGGAGC 57.055 52.632 16.48 0.00 37.78 4.70
22 23 1.392589 CACAACTTGTTGGTGGAGCT 58.607 50.000 16.48 0.00 37.78 4.09
23 24 1.334869 CACAACTTGTTGGTGGAGCTC 59.665 52.381 16.48 4.71 37.78 4.09
24 25 0.954452 CAACTTGTTGGTGGAGCTCC 59.046 55.000 26.78 26.78 0.00 4.70
25 26 0.535102 AACTTGTTGGTGGAGCTCCG 60.535 55.000 27.43 12.95 39.43 4.63
26 27 2.281484 TTGTTGGTGGAGCTCCGC 60.281 61.111 34.02 34.02 45.51 5.54
27 28 2.738213 CTTGTTGGTGGAGCTCCGCT 62.738 60.000 38.00 0.00 45.54 5.52
28 29 2.032681 GTTGGTGGAGCTCCGCTT 59.967 61.111 38.00 0.00 45.54 4.68
29 30 2.035442 GTTGGTGGAGCTCCGCTTC 61.035 63.158 38.00 26.00 45.54 3.86
30 31 3.254024 TTGGTGGAGCTCCGCTTCC 62.254 63.158 38.00 28.94 45.54 3.46
31 32 4.821589 GGTGGAGCTCCGCTTCCG 62.822 72.222 38.00 0.00 45.54 4.30
32 33 3.760035 GTGGAGCTCCGCTTCCGA 61.760 66.667 34.32 10.84 39.88 4.55
33 34 3.452786 TGGAGCTCCGCTTCCGAG 61.453 66.667 27.43 0.00 39.88 4.63
34 35 4.214327 GGAGCTCCGCTTCCGAGG 62.214 72.222 19.06 0.00 39.88 4.63
35 36 3.141488 GAGCTCCGCTTCCGAGGA 61.141 66.667 0.87 0.00 39.88 3.71
41 42 3.391382 CGCTTCCGAGGAGGGGTT 61.391 66.667 9.62 0.00 41.52 4.11
42 43 2.269241 GCTTCCGAGGAGGGGTTG 59.731 66.667 3.41 0.00 41.52 3.77
43 44 2.593956 GCTTCCGAGGAGGGGTTGT 61.594 63.158 3.41 0.00 41.52 3.32
44 45 1.296715 CTTCCGAGGAGGGGTTGTG 59.703 63.158 0.00 0.00 41.52 3.33
45 46 1.460689 TTCCGAGGAGGGGTTGTGT 60.461 57.895 0.00 0.00 41.52 3.72
46 47 1.764571 TTCCGAGGAGGGGTTGTGTG 61.765 60.000 0.00 0.00 41.52 3.82
47 48 2.347490 CGAGGAGGGGTTGTGTGG 59.653 66.667 0.00 0.00 0.00 4.17
48 49 2.034221 GAGGAGGGGTTGTGTGGC 59.966 66.667 0.00 0.00 0.00 5.01
49 50 3.569200 GAGGAGGGGTTGTGTGGCC 62.569 68.421 0.00 0.00 0.00 5.36
50 51 3.580319 GGAGGGGTTGTGTGGCCT 61.580 66.667 3.32 0.00 0.00 5.19
51 52 2.034221 GAGGGGTTGTGTGGCCTC 59.966 66.667 3.32 0.00 0.00 4.70
52 53 2.450502 AGGGGTTGTGTGGCCTCT 60.451 61.111 3.32 0.00 0.00 3.69
53 54 2.069165 GAGGGGTTGTGTGGCCTCTT 62.069 60.000 3.32 0.00 35.34 2.85
54 55 1.903404 GGGGTTGTGTGGCCTCTTG 60.903 63.158 3.32 0.00 0.00 3.02
55 56 2.564721 GGGTTGTGTGGCCTCTTGC 61.565 63.158 3.32 0.00 40.16 4.01
56 57 1.827789 GGTTGTGTGGCCTCTTGCA 60.828 57.895 3.32 0.00 43.89 4.08
57 58 1.391157 GGTTGTGTGGCCTCTTGCAA 61.391 55.000 3.32 0.00 43.89 4.08
58 59 0.249031 GTTGTGTGGCCTCTTGCAAC 60.249 55.000 17.55 17.55 44.85 4.17
59 60 1.391157 TTGTGTGGCCTCTTGCAACC 61.391 55.000 3.32 0.00 43.90 3.77
60 61 2.203480 TGTGGCCTCTTGCAACCC 60.203 61.111 3.32 0.00 43.90 4.11
61 62 2.991540 GTGGCCTCTTGCAACCCC 60.992 66.667 3.32 0.00 43.89 4.95
62 63 3.185203 TGGCCTCTTGCAACCCCT 61.185 61.111 3.32 0.00 43.89 4.79
63 64 1.850289 TGGCCTCTTGCAACCCCTA 60.850 57.895 3.32 0.00 43.89 3.53
64 65 1.077429 GGCCTCTTGCAACCCCTAG 60.077 63.158 0.00 0.00 43.89 3.02
65 66 1.562672 GGCCTCTTGCAACCCCTAGA 61.563 60.000 0.00 0.00 43.89 2.43
66 67 0.107459 GCCTCTTGCAACCCCTAGAG 60.107 60.000 0.00 0.00 40.77 2.43
67 68 0.107459 CCTCTTGCAACCCCTAGAGC 60.107 60.000 0.00 0.00 34.67 4.09
68 69 0.615331 CTCTTGCAACCCCTAGAGCA 59.385 55.000 0.00 0.00 30.32 4.26
69 70 0.615331 TCTTGCAACCCCTAGAGCAG 59.385 55.000 0.00 0.00 38.35 4.24
70 71 0.326264 CTTGCAACCCCTAGAGCAGT 59.674 55.000 0.00 0.00 38.35 4.40
71 72 0.036732 TTGCAACCCCTAGAGCAGTG 59.963 55.000 0.00 0.00 38.35 3.66
72 73 1.127567 TGCAACCCCTAGAGCAGTGT 61.128 55.000 0.00 0.00 32.48 3.55
73 74 0.391793 GCAACCCCTAGAGCAGTGTC 60.392 60.000 0.00 0.00 0.00 3.67
74 75 0.250513 CAACCCCTAGAGCAGTGTCC 59.749 60.000 0.00 0.00 0.00 4.02
75 76 0.117340 AACCCCTAGAGCAGTGTCCT 59.883 55.000 0.00 0.00 0.00 3.85
76 77 0.117340 ACCCCTAGAGCAGTGTCCTT 59.883 55.000 0.00 0.00 0.00 3.36
77 78 0.827368 CCCCTAGAGCAGTGTCCTTC 59.173 60.000 0.00 0.00 0.00 3.46
78 79 0.457851 CCCTAGAGCAGTGTCCTTCG 59.542 60.000 0.00 0.00 0.00 3.79
79 80 0.179124 CCTAGAGCAGTGTCCTTCGC 60.179 60.000 0.00 0.00 0.00 4.70
80 81 0.179124 CTAGAGCAGTGTCCTTCGCC 60.179 60.000 0.00 0.00 0.00 5.54
81 82 0.898326 TAGAGCAGTGTCCTTCGCCA 60.898 55.000 0.00 0.00 0.00 5.69
82 83 2.029844 GAGCAGTGTCCTTCGCCAC 61.030 63.158 0.00 0.00 0.00 5.01
83 84 3.050275 GCAGTGTCCTTCGCCACC 61.050 66.667 0.00 0.00 31.88 4.61
84 85 2.738521 CAGTGTCCTTCGCCACCG 60.739 66.667 0.00 0.00 31.88 4.94
85 86 4.681978 AGTGTCCTTCGCCACCGC 62.682 66.667 0.00 0.00 31.88 5.68
86 87 4.980805 GTGTCCTTCGCCACCGCA 62.981 66.667 0.00 0.00 34.03 5.69
87 88 4.015406 TGTCCTTCGCCACCGCAT 62.015 61.111 0.00 0.00 34.03 4.73
88 89 3.195698 GTCCTTCGCCACCGCATC 61.196 66.667 0.00 0.00 34.03 3.91
89 90 3.390521 TCCTTCGCCACCGCATCT 61.391 61.111 0.00 0.00 34.03 2.90
90 91 2.055633 TCCTTCGCCACCGCATCTA 61.056 57.895 0.00 0.00 34.03 1.98
91 92 1.153449 CCTTCGCCACCGCATCTAA 60.153 57.895 0.00 0.00 34.03 2.10
92 93 0.532862 CCTTCGCCACCGCATCTAAT 60.533 55.000 0.00 0.00 34.03 1.73
93 94 0.583438 CTTCGCCACCGCATCTAATG 59.417 55.000 0.00 0.00 34.03 1.90
106 107 3.461061 CATCTAATGCAGACGATGTGGT 58.539 45.455 11.59 0.00 35.62 4.16
107 108 3.610040 TCTAATGCAGACGATGTGGTT 57.390 42.857 0.00 0.00 0.00 3.67
108 109 3.261580 TCTAATGCAGACGATGTGGTTG 58.738 45.455 0.00 0.00 0.00 3.77
109 110 2.183478 AATGCAGACGATGTGGTTGA 57.817 45.000 0.00 0.00 0.00 3.18
110 111 2.408271 ATGCAGACGATGTGGTTGAT 57.592 45.000 0.00 0.00 0.00 2.57
111 112 1.441738 TGCAGACGATGTGGTTGATG 58.558 50.000 0.00 0.00 0.00 3.07
112 113 1.270785 TGCAGACGATGTGGTTGATGT 60.271 47.619 0.00 0.00 0.00 3.06
113 114 2.028567 TGCAGACGATGTGGTTGATGTA 60.029 45.455 0.00 0.00 0.00 2.29
114 115 2.604914 GCAGACGATGTGGTTGATGTAG 59.395 50.000 0.00 0.00 0.00 2.74
115 116 3.849911 CAGACGATGTGGTTGATGTAGT 58.150 45.455 0.00 0.00 0.00 2.73
116 117 4.245660 CAGACGATGTGGTTGATGTAGTT 58.754 43.478 0.00 0.00 0.00 2.24
117 118 4.327357 CAGACGATGTGGTTGATGTAGTTC 59.673 45.833 0.00 0.00 0.00 3.01
118 119 3.596214 ACGATGTGGTTGATGTAGTTCC 58.404 45.455 0.00 0.00 0.00 3.62
119 120 2.603110 CGATGTGGTTGATGTAGTTCCG 59.397 50.000 0.00 0.00 0.00 4.30
120 121 1.803334 TGTGGTTGATGTAGTTCCGC 58.197 50.000 0.00 0.00 0.00 5.54
121 122 1.346395 TGTGGTTGATGTAGTTCCGCT 59.654 47.619 0.00 0.00 0.00 5.52
122 123 1.732259 GTGGTTGATGTAGTTCCGCTG 59.268 52.381 0.00 0.00 0.00 5.18
123 124 1.338674 TGGTTGATGTAGTTCCGCTGG 60.339 52.381 0.00 0.00 0.00 4.85
124 125 1.066430 GGTTGATGTAGTTCCGCTGGA 60.066 52.381 0.00 0.00 0.00 3.86
125 126 2.614481 GGTTGATGTAGTTCCGCTGGAA 60.614 50.000 6.01 6.01 39.66 3.53
126 127 2.672961 TGATGTAGTTCCGCTGGAAG 57.327 50.000 9.79 0.00 42.88 3.46
127 128 1.899814 TGATGTAGTTCCGCTGGAAGT 59.100 47.619 17.71 17.71 45.97 3.01
128 129 2.271800 GATGTAGTTCCGCTGGAAGTG 58.728 52.381 20.83 0.00 44.18 3.16
136 137 2.435059 GCTGGAAGTGACCCTCGC 60.435 66.667 0.00 0.00 35.30 5.03
137 138 3.059982 CTGGAAGTGACCCTCGCA 58.940 61.111 0.00 0.00 0.00 5.10
138 139 1.079543 CTGGAAGTGACCCTCGCAG 60.080 63.158 0.00 0.00 0.00 5.18
139 140 1.533033 TGGAAGTGACCCTCGCAGA 60.533 57.895 0.00 0.00 0.00 4.26
150 151 4.604114 TCGCAGAGGCATCACAAG 57.396 55.556 0.00 0.00 41.24 3.16
151 152 1.742880 TCGCAGAGGCATCACAAGC 60.743 57.895 0.00 0.00 41.24 4.01
152 153 1.744368 CGCAGAGGCATCACAAGCT 60.744 57.895 0.00 0.00 41.24 3.74
153 154 1.801332 GCAGAGGCATCACAAGCTG 59.199 57.895 0.00 0.00 40.72 4.24
154 155 0.675837 GCAGAGGCATCACAAGCTGA 60.676 55.000 0.00 0.00 40.72 4.26
155 156 1.370609 CAGAGGCATCACAAGCTGAG 58.629 55.000 0.00 0.00 30.20 3.35
156 157 0.252479 AGAGGCATCACAAGCTGAGG 59.748 55.000 0.00 0.00 33.54 3.86
157 158 0.035630 GAGGCATCACAAGCTGAGGT 60.036 55.000 0.00 0.00 32.93 3.85
158 159 0.403271 AGGCATCACAAGCTGAGGTT 59.597 50.000 0.00 0.00 32.93 3.50
159 160 0.524862 GGCATCACAAGCTGAGGTTG 59.475 55.000 21.50 21.50 45.13 3.77
166 167 2.486472 CAAGCTGAGGTTGTCCATCT 57.514 50.000 15.71 0.00 36.45 2.90
167 168 2.787994 CAAGCTGAGGTTGTCCATCTT 58.212 47.619 15.71 0.00 36.45 2.40
168 169 3.152341 CAAGCTGAGGTTGTCCATCTTT 58.848 45.455 15.71 0.00 36.45 2.52
169 170 2.787994 AGCTGAGGTTGTCCATCTTTG 58.212 47.619 0.00 0.00 35.89 2.77
170 171 1.815003 GCTGAGGTTGTCCATCTTTGG 59.185 52.381 0.00 0.00 45.15 3.28
171 172 2.440409 CTGAGGTTGTCCATCTTTGGG 58.560 52.381 0.00 0.00 43.81 4.12
172 173 1.075374 TGAGGTTGTCCATCTTTGGGG 59.925 52.381 0.00 0.00 43.81 4.96
173 174 1.354368 GAGGTTGTCCATCTTTGGGGA 59.646 52.381 0.00 0.00 43.81 4.81
180 181 1.486310 TCCATCTTTGGGGACATCTCG 59.514 52.381 0.00 0.00 43.81 4.04
181 182 1.210478 CCATCTTTGGGGACATCTCGT 59.790 52.381 0.00 0.00 42.32 4.18
182 183 2.283298 CATCTTTGGGGACATCTCGTG 58.717 52.381 0.00 0.00 42.32 4.35
183 184 0.613260 TCTTTGGGGACATCTCGTGG 59.387 55.000 0.00 0.00 42.32 4.94
184 185 1.002624 TTTGGGGACATCTCGTGGC 60.003 57.895 0.00 0.00 42.32 5.01
185 186 2.796483 TTTGGGGACATCTCGTGGCG 62.796 60.000 0.00 0.00 42.32 5.69
201 202 4.735132 CGCGGGGAAGACGAAGCA 62.735 66.667 0.00 0.00 0.00 3.91
202 203 2.815647 GCGGGGAAGACGAAGCAG 60.816 66.667 0.00 0.00 0.00 4.24
203 204 2.125512 CGGGGAAGACGAAGCAGG 60.126 66.667 0.00 0.00 0.00 4.85
204 205 2.269241 GGGGAAGACGAAGCAGGG 59.731 66.667 0.00 0.00 0.00 4.45
205 206 2.593956 GGGGAAGACGAAGCAGGGT 61.594 63.158 0.00 0.00 0.00 4.34
206 207 1.376037 GGGAAGACGAAGCAGGGTG 60.376 63.158 0.00 0.00 0.00 4.61
207 208 1.376037 GGAAGACGAAGCAGGGTGG 60.376 63.158 0.00 0.00 0.00 4.61
208 209 1.376037 GAAGACGAAGCAGGGTGGG 60.376 63.158 0.00 0.00 0.00 4.61
209 210 2.804828 GAAGACGAAGCAGGGTGGGG 62.805 65.000 0.00 0.00 0.00 4.96
210 211 3.319198 GACGAAGCAGGGTGGGGA 61.319 66.667 0.00 0.00 0.00 4.81
211 212 3.316573 GACGAAGCAGGGTGGGGAG 62.317 68.421 0.00 0.00 0.00 4.30
212 213 4.101448 CGAAGCAGGGTGGGGAGG 62.101 72.222 0.00 0.00 0.00 4.30
213 214 2.936032 GAAGCAGGGTGGGGAGGT 60.936 66.667 0.00 0.00 0.00 3.85
214 215 2.452491 AAGCAGGGTGGGGAGGTT 60.452 61.111 0.00 0.00 0.00 3.50
215 216 2.771328 GAAGCAGGGTGGGGAGGTTG 62.771 65.000 0.00 0.00 0.00 3.77
216 217 3.580319 GCAGGGTGGGGAGGTTGT 61.580 66.667 0.00 0.00 0.00 3.32
217 218 3.146828 GCAGGGTGGGGAGGTTGTT 62.147 63.158 0.00 0.00 0.00 2.83
218 219 1.228552 CAGGGTGGGGAGGTTGTTG 60.229 63.158 0.00 0.00 0.00 3.33
219 220 2.600470 GGGTGGGGAGGTTGTTGC 60.600 66.667 0.00 0.00 0.00 4.17
220 221 2.197324 GGTGGGGAGGTTGTTGCA 59.803 61.111 0.00 0.00 0.00 4.08
221 222 1.903404 GGTGGGGAGGTTGTTGCAG 60.903 63.158 0.00 0.00 0.00 4.41
222 223 2.203480 TGGGGAGGTTGTTGCAGC 60.203 61.111 0.00 0.00 0.00 5.25
223 224 2.203480 GGGGAGGTTGTTGCAGCA 60.203 61.111 0.00 0.00 0.00 4.41
224 225 2.270986 GGGGAGGTTGTTGCAGCAG 61.271 63.158 2.72 0.00 0.00 4.24
225 226 2.647297 GGAGGTTGTTGCAGCAGC 59.353 61.111 8.90 8.90 42.57 5.25
239 240 3.561213 CAGCACCTGCAGATCGCG 61.561 66.667 17.39 0.00 46.97 5.87
240 241 4.827087 AGCACCTGCAGATCGCGG 62.827 66.667 17.39 0.00 46.97 6.46
242 243 2.887568 CACCTGCAGATCGCGGTC 60.888 66.667 17.39 12.53 46.47 4.79
243 244 4.498520 ACCTGCAGATCGCGGTCG 62.499 66.667 17.39 10.22 46.47 4.79
244 245 4.498520 CCTGCAGATCGCGGTCGT 62.499 66.667 17.39 0.00 46.47 4.34
245 246 3.250323 CTGCAGATCGCGGTCGTG 61.250 66.667 14.75 13.46 46.97 4.35
246 247 4.794439 TGCAGATCGCGGTCGTGG 62.794 66.667 14.75 9.01 46.97 4.94
247 248 4.796231 GCAGATCGCGGTCGTGGT 62.796 66.667 14.75 0.00 36.96 4.16
248 249 2.880879 CAGATCGCGGTCGTGGTG 60.881 66.667 14.75 2.44 36.96 4.17
249 250 3.060000 AGATCGCGGTCGTGGTGA 61.060 61.111 14.75 0.00 36.96 4.02
257 258 3.986006 GTCGTGGTGACGCCTCCA 61.986 66.667 6.60 0.00 45.68 3.86
258 259 3.228017 TCGTGGTGACGCCTCCAA 61.228 61.111 6.60 0.00 45.68 3.53
259 260 2.280524 CGTGGTGACGCCTCCAAA 60.281 61.111 6.60 0.00 39.10 3.28
260 261 2.317609 CGTGGTGACGCCTCCAAAG 61.318 63.158 6.60 0.00 39.10 2.77
261 262 2.281484 TGGTGACGCCTCCAAAGC 60.281 61.111 6.60 0.00 38.35 3.51
268 269 4.703703 GCCTCCAAAGCGTCTTCT 57.296 55.556 0.00 0.00 0.00 2.85
269 270 2.934083 GCCTCCAAAGCGTCTTCTT 58.066 52.632 0.00 0.00 0.00 2.52
270 271 0.519077 GCCTCCAAAGCGTCTTCTTG 59.481 55.000 0.00 0.00 0.00 3.02
271 272 1.160137 CCTCCAAAGCGTCTTCTTGG 58.840 55.000 0.00 0.00 0.00 3.61
272 273 1.270839 CCTCCAAAGCGTCTTCTTGGA 60.271 52.381 10.55 10.55 0.00 3.53
273 274 1.801178 CTCCAAAGCGTCTTCTTGGAC 59.199 52.381 8.18 0.00 0.00 4.02
282 283 3.305398 GTCTTCTTGGACGACATGACT 57.695 47.619 0.00 0.00 33.48 3.41
283 284 2.989840 GTCTTCTTGGACGACATGACTG 59.010 50.000 0.00 0.00 33.48 3.51
284 285 2.029020 TCTTCTTGGACGACATGACTGG 60.029 50.000 0.00 0.00 33.48 4.00
285 286 0.608130 TCTTGGACGACATGACTGGG 59.392 55.000 0.00 0.00 0.00 4.45
286 287 0.391661 CTTGGACGACATGACTGGGG 60.392 60.000 0.00 0.00 0.00 4.96
287 288 2.125106 GGACGACATGACTGGGGC 60.125 66.667 0.00 0.00 0.00 5.80
288 289 2.125106 GACGACATGACTGGGGCC 60.125 66.667 0.00 0.00 0.00 5.80
289 290 3.682292 GACGACATGACTGGGGCCC 62.682 68.421 18.17 18.17 0.00 5.80
290 291 3.716195 CGACATGACTGGGGCCCA 61.716 66.667 26.87 26.87 0.00 5.36
291 292 2.763215 GACATGACTGGGGCCCAA 59.237 61.111 28.43 12.96 30.80 4.12
292 293 1.379044 GACATGACTGGGGCCCAAG 60.379 63.158 28.43 26.13 30.80 3.61
293 294 2.043652 CATGACTGGGGCCCAAGG 60.044 66.667 30.70 18.78 30.80 3.61
317 318 3.393472 CCTGCCATAGGTCTTGCTC 57.607 57.895 0.00 0.00 42.00 4.26
318 319 0.179034 CCTGCCATAGGTCTTGCTCC 60.179 60.000 0.00 0.00 42.00 4.70
319 320 0.531532 CTGCCATAGGTCTTGCTCCG 60.532 60.000 0.00 0.00 0.00 4.63
320 321 1.889573 GCCATAGGTCTTGCTCCGC 60.890 63.158 0.00 0.00 0.00 5.54
321 322 1.826024 CCATAGGTCTTGCTCCGCT 59.174 57.895 0.00 0.00 0.00 5.52
322 323 0.249657 CCATAGGTCTTGCTCCGCTC 60.250 60.000 0.00 0.00 0.00 5.03
323 324 0.596083 CATAGGTCTTGCTCCGCTCG 60.596 60.000 0.00 0.00 0.00 5.03
324 325 0.752009 ATAGGTCTTGCTCCGCTCGA 60.752 55.000 0.00 0.00 0.00 4.04
325 326 1.654954 TAGGTCTTGCTCCGCTCGAC 61.655 60.000 0.00 0.00 0.00 4.20
326 327 2.507324 GTCTTGCTCCGCTCGACC 60.507 66.667 0.00 0.00 0.00 4.79
327 328 2.989253 TCTTGCTCCGCTCGACCA 60.989 61.111 0.00 0.00 0.00 4.02
328 329 2.185350 CTTGCTCCGCTCGACCAT 59.815 61.111 0.00 0.00 0.00 3.55
329 330 2.125552 TTGCTCCGCTCGACCATG 60.126 61.111 0.00 0.00 0.00 3.66
330 331 3.664025 TTGCTCCGCTCGACCATGG 62.664 63.158 11.19 11.19 0.00 3.66
331 332 4.899239 GCTCCGCTCGACCATGGG 62.899 72.222 18.09 0.00 0.00 4.00
332 333 3.461773 CTCCGCTCGACCATGGGT 61.462 66.667 18.09 0.99 39.44 4.51
342 343 3.660571 CCATGGGTCACAGGGCCA 61.661 66.667 6.18 0.00 45.06 5.36
343 344 2.361610 CATGGGTCACAGGGCCAC 60.362 66.667 6.18 0.00 0.00 5.01
344 345 3.661648 ATGGGTCACAGGGCCACC 61.662 66.667 6.18 3.84 0.00 4.61
346 347 3.661648 GGGTCACAGGGCCACCAT 61.662 66.667 6.18 0.00 40.13 3.55
347 348 2.361610 GGTCACAGGGCCACCATG 60.362 66.667 6.18 0.00 40.13 3.66
348 349 2.756400 GTCACAGGGCCACCATGA 59.244 61.111 6.18 0.00 40.13 3.07
349 350 1.377725 GTCACAGGGCCACCATGAG 60.378 63.158 6.18 0.00 40.13 2.90
350 351 2.753043 CACAGGGCCACCATGAGC 60.753 66.667 6.18 0.00 40.13 4.26
351 352 4.415150 ACAGGGCCACCATGAGCG 62.415 66.667 6.18 0.00 40.13 5.03
357 358 4.864334 CCACCATGAGCGCCCTCC 62.864 72.222 2.29 0.00 37.29 4.30
382 383 4.593864 GCGCCCGGATGAGACCTC 62.594 72.222 0.73 0.00 0.00 3.85
383 384 3.917760 CGCCCGGATGAGACCTCC 61.918 72.222 0.73 0.00 0.00 4.30
384 385 2.444895 GCCCGGATGAGACCTCCT 60.445 66.667 0.73 0.00 0.00 3.69
385 386 2.801631 GCCCGGATGAGACCTCCTG 61.802 68.421 0.73 0.00 0.00 3.86
386 387 1.075970 CCCGGATGAGACCTCCTGA 60.076 63.158 0.73 0.00 0.00 3.86
387 388 1.395826 CCCGGATGAGACCTCCTGAC 61.396 65.000 0.73 0.00 0.00 3.51
388 389 1.395826 CCGGATGAGACCTCCTGACC 61.396 65.000 0.00 0.00 0.00 4.02
389 390 1.729470 CGGATGAGACCTCCTGACCG 61.729 65.000 0.00 0.00 0.00 4.79
390 391 1.439644 GATGAGACCTCCTGACCGC 59.560 63.158 0.00 0.00 0.00 5.68
391 392 2.022240 GATGAGACCTCCTGACCGCC 62.022 65.000 0.00 0.00 0.00 6.13
392 393 2.680352 GAGACCTCCTGACCGCCA 60.680 66.667 0.00 0.00 0.00 5.69
393 394 2.997897 AGACCTCCTGACCGCCAC 60.998 66.667 0.00 0.00 0.00 5.01
394 395 4.436998 GACCTCCTGACCGCCACG 62.437 72.222 0.00 0.00 0.00 4.94
415 416 2.258591 GCCAGACGACTCGAAGCA 59.741 61.111 5.20 0.00 0.00 3.91
416 417 1.803519 GCCAGACGACTCGAAGCAG 60.804 63.158 5.20 0.00 0.00 4.24
417 418 1.153939 CCAGACGACTCGAAGCAGG 60.154 63.158 5.20 0.00 0.00 4.85
418 419 1.587043 CCAGACGACTCGAAGCAGGA 61.587 60.000 5.20 0.00 0.00 3.86
419 420 0.179176 CAGACGACTCGAAGCAGGAG 60.179 60.000 5.20 0.00 37.54 3.69
420 421 1.137825 GACGACTCGAAGCAGGAGG 59.862 63.158 5.20 0.00 35.82 4.30
421 422 1.303398 ACGACTCGAAGCAGGAGGA 60.303 57.895 5.20 0.00 35.82 3.71
422 423 1.309499 ACGACTCGAAGCAGGAGGAG 61.309 60.000 5.20 0.00 35.82 3.69
423 424 1.027255 CGACTCGAAGCAGGAGGAGA 61.027 60.000 0.00 0.00 35.82 3.71
424 425 1.398692 GACTCGAAGCAGGAGGAGAT 58.601 55.000 4.12 0.00 35.82 2.75
425 426 1.066908 GACTCGAAGCAGGAGGAGATG 59.933 57.143 4.12 0.00 35.82 2.90
426 427 0.249405 CTCGAAGCAGGAGGAGATGC 60.249 60.000 0.00 0.00 42.87 3.91
427 428 1.227497 CGAAGCAGGAGGAGATGCC 60.227 63.158 0.00 0.00 43.60 4.40
428 429 1.910722 GAAGCAGGAGGAGATGCCA 59.089 57.895 0.00 0.00 43.60 4.92
429 430 0.254178 GAAGCAGGAGGAGATGCCAA 59.746 55.000 0.00 0.00 43.60 4.52
430 431 0.255318 AAGCAGGAGGAGATGCCAAG 59.745 55.000 0.00 0.00 43.60 3.61
431 432 1.823041 GCAGGAGGAGATGCCAAGC 60.823 63.158 0.00 0.00 40.02 4.01
432 433 1.153005 CAGGAGGAGATGCCAAGCC 60.153 63.158 0.00 0.00 40.02 4.35
433 434 2.194326 GGAGGAGATGCCAAGCCC 59.806 66.667 0.00 0.00 40.02 5.19
434 435 2.683465 GGAGGAGATGCCAAGCCCA 61.683 63.158 0.00 0.00 40.02 5.36
435 436 1.153005 GAGGAGATGCCAAGCCCAG 60.153 63.158 0.00 0.00 40.02 4.45
436 437 1.617536 AGGAGATGCCAAGCCCAGA 60.618 57.895 0.00 0.00 40.02 3.86
437 438 1.153005 GGAGATGCCAAGCCCAGAG 60.153 63.158 0.00 0.00 36.34 3.35
438 439 1.630126 GGAGATGCCAAGCCCAGAGA 61.630 60.000 0.00 0.00 36.34 3.10
439 440 0.463474 GAGATGCCAAGCCCAGAGAC 60.463 60.000 0.00 0.00 0.00 3.36
440 441 1.452833 GATGCCAAGCCCAGAGACC 60.453 63.158 0.00 0.00 0.00 3.85
441 442 2.202236 GATGCCAAGCCCAGAGACCA 62.202 60.000 0.00 0.00 0.00 4.02
442 443 2.360475 GCCAAGCCCAGAGACCAC 60.360 66.667 0.00 0.00 0.00 4.16
443 444 2.352805 CCAAGCCCAGAGACCACC 59.647 66.667 0.00 0.00 0.00 4.61
444 445 2.528818 CCAAGCCCAGAGACCACCA 61.529 63.158 0.00 0.00 0.00 4.17
445 446 1.002868 CAAGCCCAGAGACCACCAG 60.003 63.158 0.00 0.00 0.00 4.00
446 447 2.900106 AAGCCCAGAGACCACCAGC 61.900 63.158 0.00 0.00 0.00 4.85
447 448 4.416738 GCCCAGAGACCACCAGCC 62.417 72.222 0.00 0.00 0.00 4.85
448 449 4.087892 CCCAGAGACCACCAGCCG 62.088 72.222 0.00 0.00 0.00 5.52
449 450 4.087892 CCAGAGACCACCAGCCGG 62.088 72.222 0.00 0.00 38.77 6.13
451 452 2.997897 AGAGACCACCAGCCGGTC 60.998 66.667 1.90 0.95 44.71 4.79
475 476 4.176752 CCTACGGGAAGGGGCAGC 62.177 72.222 0.00 0.00 32.55 5.25
476 477 3.399181 CTACGGGAAGGGGCAGCA 61.399 66.667 0.00 0.00 0.00 4.41
477 478 3.391665 CTACGGGAAGGGGCAGCAG 62.392 68.421 0.00 0.00 0.00 4.24
492 493 3.058160 CAGCGGAGTTGGGGCTTG 61.058 66.667 0.00 0.00 34.22 4.01
493 494 3.249189 AGCGGAGTTGGGGCTTGA 61.249 61.111 0.00 0.00 31.91 3.02
494 495 2.747855 GCGGAGTTGGGGCTTGAG 60.748 66.667 0.00 0.00 0.00 3.02
495 496 2.045926 CGGAGTTGGGGCTTGAGG 60.046 66.667 0.00 0.00 0.00 3.86
496 497 2.361737 GGAGTTGGGGCTTGAGGC 60.362 66.667 0.00 0.00 40.90 4.70
511 512 1.459369 AGGCCATGGCATCAGATCC 59.541 57.895 36.56 17.44 44.11 3.36
512 513 1.152138 GGCCATGGCATCAGATCCA 59.848 57.895 36.56 4.59 44.11 3.41
513 514 1.177256 GGCCATGGCATCAGATCCAC 61.177 60.000 36.56 12.63 44.11 4.02
514 515 1.512996 GCCATGGCATCAGATCCACG 61.513 60.000 32.08 0.00 41.49 4.94
515 516 1.512996 CCATGGCATCAGATCCACGC 61.513 60.000 0.00 0.00 34.81 5.34
516 517 1.596203 ATGGCATCAGATCCACGCG 60.596 57.895 3.53 3.53 34.81 6.01
517 518 2.031674 ATGGCATCAGATCCACGCGA 62.032 55.000 15.93 0.00 34.81 5.87
518 519 1.521457 GGCATCAGATCCACGCGAA 60.521 57.895 15.93 0.00 0.00 4.70
519 520 1.493950 GGCATCAGATCCACGCGAAG 61.494 60.000 15.93 4.40 0.00 3.79
520 521 1.493950 GCATCAGATCCACGCGAAGG 61.494 60.000 15.93 15.14 0.00 3.46
521 522 0.103026 CATCAGATCCACGCGAAGGA 59.897 55.000 22.99 22.99 39.97 3.36
523 524 1.687563 TCAGATCCACGCGAAGGATA 58.312 50.000 28.44 16.21 45.65 2.59
524 525 2.028876 TCAGATCCACGCGAAGGATAA 58.971 47.619 28.44 18.15 45.65 1.75
525 526 2.034685 TCAGATCCACGCGAAGGATAAG 59.965 50.000 28.44 23.70 45.65 1.73
526 527 1.341531 AGATCCACGCGAAGGATAAGG 59.658 52.381 28.44 11.76 45.65 2.69
527 528 0.393077 ATCCACGCGAAGGATAAGGG 59.607 55.000 27.69 10.01 43.90 3.95
528 529 1.227556 CCACGCGAAGGATAAGGGG 60.228 63.158 15.93 0.00 0.00 4.79
529 530 1.682451 CCACGCGAAGGATAAGGGGA 61.682 60.000 15.93 0.00 0.00 4.81
530 531 0.177141 CACGCGAAGGATAAGGGGAA 59.823 55.000 15.93 0.00 0.00 3.97
531 532 0.464452 ACGCGAAGGATAAGGGGAAG 59.536 55.000 15.93 0.00 0.00 3.46
532 533 0.249911 CGCGAAGGATAAGGGGAAGG 60.250 60.000 0.00 0.00 0.00 3.46
533 534 0.837940 GCGAAGGATAAGGGGAAGGT 59.162 55.000 0.00 0.00 0.00 3.50
534 535 1.475213 GCGAAGGATAAGGGGAAGGTG 60.475 57.143 0.00 0.00 0.00 4.00
535 536 1.141053 CGAAGGATAAGGGGAAGGTGG 59.859 57.143 0.00 0.00 0.00 4.61
536 537 0.927029 AAGGATAAGGGGAAGGTGGC 59.073 55.000 0.00 0.00 0.00 5.01
537 538 0.994050 AGGATAAGGGGAAGGTGGCC 60.994 60.000 0.00 0.00 0.00 5.36
538 539 1.148498 GATAAGGGGAAGGTGGCCG 59.852 63.158 0.00 0.00 0.00 6.13
539 540 1.307517 ATAAGGGGAAGGTGGCCGA 60.308 57.895 0.00 0.00 0.00 5.54
540 541 1.632965 ATAAGGGGAAGGTGGCCGAC 61.633 60.000 0.00 0.00 0.00 4.79
543 544 4.754667 GGGAAGGTGGCCGACGTC 62.755 72.222 5.18 5.18 0.00 4.34
578 579 4.692475 CGGGTGGGGGTGAACGTC 62.692 72.222 0.00 0.00 0.00 4.34
579 580 4.692475 GGGTGGGGGTGAACGTCG 62.692 72.222 0.00 0.00 0.00 5.12
580 581 4.692475 GGTGGGGGTGAACGTCGG 62.692 72.222 0.00 0.00 0.00 4.79
594 595 2.945984 TCGGCGTCGAAGTAACGT 59.054 55.556 10.97 0.00 43.03 3.99
595 596 1.440850 TCGGCGTCGAAGTAACGTG 60.441 57.895 10.97 0.00 43.03 4.49
596 597 2.767697 GGCGTCGAAGTAACGTGC 59.232 61.111 0.00 0.00 42.02 5.34
597 598 2.385361 GCGTCGAAGTAACGTGCG 59.615 61.111 0.00 0.00 42.02 5.34
598 599 3.051171 GCGTCGAAGTAACGTGCGG 62.051 63.158 0.00 0.00 42.02 5.69
599 600 2.767697 GTCGAAGTAACGTGCGGC 59.232 61.111 0.00 0.00 34.70 6.53
601 602 3.834373 CGAAGTAACGTGCGGCGG 61.834 66.667 9.78 0.00 46.52 6.13
602 603 2.431260 GAAGTAACGTGCGGCGGA 60.431 61.111 9.78 1.34 46.52 5.54
603 604 2.431942 AAGTAACGTGCGGCGGAG 60.432 61.111 9.78 2.38 46.52 4.63
604 605 2.807631 GAAGTAACGTGCGGCGGAGA 62.808 60.000 9.78 0.00 46.52 3.71
605 606 2.814183 AAGTAACGTGCGGCGGAGAG 62.814 60.000 9.78 5.55 46.52 3.20
606 607 4.124351 TAACGTGCGGCGGAGAGG 62.124 66.667 9.78 0.06 46.52 3.69
613 614 4.824515 CGGCGGAGAGGGAGAGGT 62.825 72.222 0.00 0.00 0.00 3.85
614 615 3.151022 GGCGGAGAGGGAGAGGTG 61.151 72.222 0.00 0.00 0.00 4.00
615 616 3.151022 GCGGAGAGGGAGAGGTGG 61.151 72.222 0.00 0.00 0.00 4.61
616 617 2.443016 CGGAGAGGGAGAGGTGGG 60.443 72.222 0.00 0.00 0.00 4.61
617 618 2.041405 GGAGAGGGAGAGGTGGGG 60.041 72.222 0.00 0.00 0.00 4.96
618 619 2.781406 GAGAGGGAGAGGTGGGGT 59.219 66.667 0.00 0.00 0.00 4.95
619 620 1.081277 GAGAGGGAGAGGTGGGGTT 59.919 63.158 0.00 0.00 0.00 4.11
620 621 0.547954 GAGAGGGAGAGGTGGGGTTT 60.548 60.000 0.00 0.00 0.00 3.27
621 622 0.103876 AGAGGGAGAGGTGGGGTTTT 60.104 55.000 0.00 0.00 0.00 2.43
622 623 0.038310 GAGGGAGAGGTGGGGTTTTG 59.962 60.000 0.00 0.00 0.00 2.44
623 624 0.701310 AGGGAGAGGTGGGGTTTTGT 60.701 55.000 0.00 0.00 0.00 2.83
624 625 0.251209 GGGAGAGGTGGGGTTTTGTC 60.251 60.000 0.00 0.00 0.00 3.18
625 626 0.771755 GGAGAGGTGGGGTTTTGTCT 59.228 55.000 0.00 0.00 0.00 3.41
626 627 1.271434 GGAGAGGTGGGGTTTTGTCTC 60.271 57.143 0.00 0.00 0.00 3.36
627 628 0.771755 AGAGGTGGGGTTTTGTCTCC 59.228 55.000 0.00 0.00 0.00 3.71
628 629 0.771755 GAGGTGGGGTTTTGTCTCCT 59.228 55.000 0.00 0.00 0.00 3.69
629 630 1.982958 GAGGTGGGGTTTTGTCTCCTA 59.017 52.381 0.00 0.00 0.00 2.94
630 631 1.703513 AGGTGGGGTTTTGTCTCCTAC 59.296 52.381 0.00 0.00 0.00 3.18
631 632 1.703513 GGTGGGGTTTTGTCTCCTACT 59.296 52.381 0.00 0.00 33.36 2.57
632 633 2.908351 GGTGGGGTTTTGTCTCCTACTA 59.092 50.000 0.00 0.00 33.36 1.82
633 634 3.055312 GGTGGGGTTTTGTCTCCTACTAG 60.055 52.174 0.00 0.00 33.36 2.57
634 635 3.055312 GTGGGGTTTTGTCTCCTACTAGG 60.055 52.174 0.00 0.00 36.46 3.02
635 636 2.093075 GGGGTTTTGTCTCCTACTAGGC 60.093 54.545 0.00 0.00 34.61 3.93
636 637 2.570302 GGGTTTTGTCTCCTACTAGGCA 59.430 50.000 0.00 0.00 34.61 4.75
637 638 3.597255 GGTTTTGTCTCCTACTAGGCAC 58.403 50.000 0.00 0.00 34.61 5.01
638 639 3.261137 GGTTTTGTCTCCTACTAGGCACT 59.739 47.826 0.00 0.00 46.37 4.40
639 640 4.262938 GGTTTTGTCTCCTACTAGGCACTT 60.263 45.833 0.00 0.00 41.75 3.16
640 641 4.803098 TTTGTCTCCTACTAGGCACTTC 57.197 45.455 0.00 0.00 41.75 3.01
641 642 2.736347 TGTCTCCTACTAGGCACTTCC 58.264 52.381 0.00 0.00 41.75 3.46
643 644 3.245658 TGTCTCCTACTAGGCACTTCCTT 60.246 47.826 0.00 0.00 44.75 3.36
644 645 3.382227 GTCTCCTACTAGGCACTTCCTTC 59.618 52.174 0.00 0.00 44.75 3.46
645 646 3.011369 TCTCCTACTAGGCACTTCCTTCA 59.989 47.826 0.00 0.00 44.75 3.02
646 647 3.964031 CTCCTACTAGGCACTTCCTTCAT 59.036 47.826 0.00 0.00 44.75 2.57
647 648 3.961408 TCCTACTAGGCACTTCCTTCATC 59.039 47.826 0.00 0.00 44.75 2.92
648 649 3.964031 CCTACTAGGCACTTCCTTCATCT 59.036 47.826 0.00 0.00 44.75 2.90
649 650 4.038642 CCTACTAGGCACTTCCTTCATCTC 59.961 50.000 0.00 0.00 44.75 2.75
650 651 3.445008 ACTAGGCACTTCCTTCATCTCA 58.555 45.455 0.00 0.00 44.75 3.27
651 652 2.777832 AGGCACTTCCTTCATCTCAC 57.222 50.000 0.00 0.00 44.75 3.51
652 653 1.980765 AGGCACTTCCTTCATCTCACA 59.019 47.619 0.00 0.00 44.75 3.58
653 654 2.373169 AGGCACTTCCTTCATCTCACAA 59.627 45.455 0.00 0.00 44.75 3.33
654 655 3.009916 AGGCACTTCCTTCATCTCACAAT 59.990 43.478 0.00 0.00 44.75 2.71
655 656 4.225942 AGGCACTTCCTTCATCTCACAATA 59.774 41.667 0.00 0.00 44.75 1.90
656 657 5.104193 AGGCACTTCCTTCATCTCACAATAT 60.104 40.000 0.00 0.00 44.75 1.28
657 658 6.100279 AGGCACTTCCTTCATCTCACAATATA 59.900 38.462 0.00 0.00 44.75 0.86
658 659 6.767902 GGCACTTCCTTCATCTCACAATATAA 59.232 38.462 0.00 0.00 0.00 0.98
659 660 7.041508 GGCACTTCCTTCATCTCACAATATAAG 60.042 40.741 0.00 0.00 0.00 1.73
660 661 7.519649 GCACTTCCTTCATCTCACAATATAAGC 60.520 40.741 0.00 0.00 0.00 3.09
661 662 6.703607 ACTTCCTTCATCTCACAATATAAGCG 59.296 38.462 0.00 0.00 0.00 4.68
662 663 4.991056 TCCTTCATCTCACAATATAAGCGC 59.009 41.667 0.00 0.00 0.00 5.92
663 664 4.143242 CCTTCATCTCACAATATAAGCGCG 60.143 45.833 0.00 0.00 0.00 6.86
664 665 3.977427 TCATCTCACAATATAAGCGCGT 58.023 40.909 8.43 0.00 0.00 6.01
665 666 4.368315 TCATCTCACAATATAAGCGCGTT 58.632 39.130 8.43 0.00 0.00 4.84
666 667 4.808895 TCATCTCACAATATAAGCGCGTTT 59.191 37.500 13.97 13.97 0.00 3.60
667 668 5.293324 TCATCTCACAATATAAGCGCGTTTT 59.707 36.000 14.84 8.40 0.00 2.43
668 669 5.539582 TCTCACAATATAAGCGCGTTTTT 57.460 34.783 14.84 8.84 0.00 1.94
669 670 5.320723 TCTCACAATATAAGCGCGTTTTTG 58.679 37.500 14.84 14.62 0.00 2.44
670 671 5.120986 TCTCACAATATAAGCGCGTTTTTGA 59.879 36.000 20.59 10.78 0.00 2.69
671 672 5.083389 TCACAATATAAGCGCGTTTTTGAC 58.917 37.500 20.59 0.00 0.00 3.18
672 673 4.848841 CACAATATAAGCGCGTTTTTGACA 59.151 37.500 20.59 1.95 0.00 3.58
673 674 4.849383 ACAATATAAGCGCGTTTTTGACAC 59.151 37.500 20.59 0.00 0.00 3.67
674 675 4.671880 ATATAAGCGCGTTTTTGACACA 57.328 36.364 14.84 0.00 0.00 3.72
675 676 2.826979 TAAGCGCGTTTTTGACACAA 57.173 40.000 14.84 0.00 0.00 3.33
676 677 1.264672 AAGCGCGTTTTTGACACAAC 58.735 45.000 8.43 0.00 0.00 3.32
677 678 0.859788 AGCGCGTTTTTGACACAACG 60.860 50.000 8.43 12.71 46.84 4.10
685 686 6.904954 CGTTTTTGACACAACGCTTATATT 57.095 33.333 6.24 0.00 39.36 1.28
686 687 7.996465 CGTTTTTGACACAACGCTTATATTA 57.004 32.000 6.24 0.00 39.36 0.98
687 688 8.595781 CGTTTTTGACACAACGCTTATATTAT 57.404 30.769 6.24 0.00 39.36 1.28
688 689 8.512297 CGTTTTTGACACAACGCTTATATTATG 58.488 33.333 6.24 0.00 39.36 1.90
689 690 8.794406 GTTTTTGACACAACGCTTATATTATGG 58.206 33.333 0.00 0.00 0.00 2.74
690 691 6.612247 TTGACACAACGCTTATATTATGGG 57.388 37.500 0.00 0.00 0.00 4.00
691 692 5.919755 TGACACAACGCTTATATTATGGGA 58.080 37.500 0.00 0.00 0.00 4.37
692 693 5.756347 TGACACAACGCTTATATTATGGGAC 59.244 40.000 0.00 0.00 0.00 4.46
693 694 4.748102 ACACAACGCTTATATTATGGGACG 59.252 41.667 0.00 0.00 0.00 4.79
694 695 4.151689 CACAACGCTTATATTATGGGACGG 59.848 45.833 0.00 0.00 0.00 4.79
695 696 4.039488 ACAACGCTTATATTATGGGACGGA 59.961 41.667 0.00 0.00 0.00 4.69
733 734 3.629087 GGCAACTCTCCTAGGTACTACA 58.371 50.000 9.08 0.00 41.75 2.74
734 735 3.380954 GGCAACTCTCCTAGGTACTACAC 59.619 52.174 9.08 0.00 41.75 2.90
736 737 4.511527 CAACTCTCCTAGGTACTACACGA 58.488 47.826 9.08 0.00 41.75 4.35
737 738 4.405116 ACTCTCCTAGGTACTACACGAG 57.595 50.000 9.08 5.79 41.75 4.18
738 739 4.029520 ACTCTCCTAGGTACTACACGAGA 58.970 47.826 9.08 0.00 41.75 4.04
740 741 3.387374 TCTCCTAGGTACTACACGAGAGG 59.613 52.174 9.08 0.00 41.75 3.69
741 742 2.158842 TCCTAGGTACTACACGAGAGGC 60.159 54.545 9.08 0.00 41.75 4.70
742 743 1.865970 CTAGGTACTACACGAGAGGCG 59.134 57.143 0.00 0.00 43.48 5.52
745 746 1.377594 TACTACACGAGAGGCGGCA 60.378 57.895 13.08 0.00 46.49 5.69
746 747 1.374343 TACTACACGAGAGGCGGCAG 61.374 60.000 13.08 0.00 46.49 4.85
747 748 4.129737 TACACGAGAGGCGGCAGC 62.130 66.667 13.08 0.00 46.49 5.25
799 809 2.554032 CCACATTTCACAGTCCAACCTC 59.446 50.000 0.00 0.00 0.00 3.85
822 832 3.461773 CCGTCCGTCCATCAGCCT 61.462 66.667 0.00 0.00 0.00 4.58
867 878 2.666190 CAGGCCGCATACCATCCG 60.666 66.667 0.00 0.00 0.00 4.18
868 879 3.161450 AGGCCGCATACCATCCGT 61.161 61.111 0.00 0.00 0.00 4.69
869 880 2.665185 GGCCGCATACCATCCGTC 60.665 66.667 0.00 0.00 0.00 4.79
871 882 1.227556 GCCGCATACCATCCGTCTT 60.228 57.895 0.00 0.00 0.00 3.01
872 883 1.498865 GCCGCATACCATCCGTCTTG 61.499 60.000 0.00 0.00 0.00 3.02
873 884 0.179084 CCGCATACCATCCGTCTTGT 60.179 55.000 0.00 0.00 0.00 3.16
875 886 1.583054 GCATACCATCCGTCTTGTCC 58.417 55.000 0.00 0.00 0.00 4.02
876 887 1.139058 GCATACCATCCGTCTTGTCCT 59.861 52.381 0.00 0.00 0.00 3.85
889 900 1.003696 CTTGTCCTTTGACCTCCTCCC 59.996 57.143 0.00 0.00 41.01 4.30
936 950 3.816524 CCCTTCTCGCTCGCGTCT 61.817 66.667 5.77 0.00 40.74 4.18
1280 1294 1.224592 GGAGGACGTCATGCCCATT 59.775 57.895 18.91 0.00 0.00 3.16
1385 1399 2.557372 CCCCGTTTGGTTGGGTTCG 61.557 63.158 0.00 0.00 44.44 3.95
1402 1416 2.036958 TCGTGGAATGGGCTGTAATG 57.963 50.000 0.00 0.00 0.00 1.90
1567 1596 1.070309 CACGCTTGTTCTGAGCACTTC 60.070 52.381 0.00 0.00 40.13 3.01
1668 1697 1.271543 TGTCCTGATGCACTTTGGAGG 60.272 52.381 0.00 0.00 0.00 4.30
1714 1743 1.617322 ATGCCATCATCCATCTGTGC 58.383 50.000 0.00 0.00 0.00 4.57
1782 1811 4.431378 TCCTTGTTCCCTGTCTACCATAA 58.569 43.478 0.00 0.00 0.00 1.90
1864 1900 8.034215 TGCTGGTTAATTTGTGATTTTATGAGG 58.966 33.333 0.00 0.00 0.00 3.86
1959 1995 7.836183 ACTGGAAATTGCTACATTAGAAGGATT 59.164 33.333 0.00 0.00 0.00 3.01
1967 2003 6.599244 TGCTACATTAGAAGGATTTCTGTTGG 59.401 38.462 0.26 0.00 43.41 3.77
2048 2085 3.733337 TGCATATGTGTGTGTGTGTGTA 58.267 40.909 4.29 0.00 0.00 2.90
2050 2087 5.482908 TGCATATGTGTGTGTGTGTGTATA 58.517 37.500 4.29 0.00 0.00 1.47
2051 2088 5.350091 TGCATATGTGTGTGTGTGTGTATAC 59.650 40.000 4.29 0.00 0.00 1.47
2128 2165 1.422531 ATTCAAAAGCTGTTGGGCCA 58.577 45.000 16.70 0.00 0.00 5.36
2145 2182 0.831288 CCATGTTTGGCAACCCTCCA 60.831 55.000 0.00 0.00 35.85 3.86
2277 2314 4.416848 AGAAATTGGGGTATATGGAGCAGT 59.583 41.667 0.00 0.00 0.00 4.40
2279 2316 2.487746 TGGGGTATATGGAGCAGTGA 57.512 50.000 0.00 0.00 0.00 3.41
2353 2392 0.472471 TTTCGCTTTCACTCCCCACT 59.528 50.000 0.00 0.00 0.00 4.00
2392 2432 0.457851 CTCTGCCTCCACTTACTCCG 59.542 60.000 0.00 0.00 0.00 4.63
2416 2456 2.892852 CCACAGATCTCTCCCTCTCATC 59.107 54.545 0.00 0.00 0.00 2.92
2476 2516 2.524394 AGTGTCAGCACCGAGGGT 60.524 61.111 0.00 0.00 46.35 4.34
2524 2564 1.666054 GAGCTCTGAGGCATCTTTGG 58.334 55.000 6.43 0.00 34.17 3.28
2613 2653 1.100510 CTGTACGGCCAGCAGTAGTA 58.899 55.000 2.24 0.00 0.00 1.82
2614 2654 1.065701 CTGTACGGCCAGCAGTAGTAG 59.934 57.143 2.24 2.15 0.00 2.57
2615 2655 0.248949 GTACGGCCAGCAGTAGTAGC 60.249 60.000 2.24 0.00 0.00 3.58
2649 2689 2.747855 CCGGTTTCTCCAGCCAGC 60.748 66.667 0.00 0.00 35.57 4.85
2664 2704 0.529378 CCAGCAGCATCAAAGTTCCC 59.471 55.000 0.00 0.00 0.00 3.97
2717 2757 4.938756 ACCCTGTGGAAGGCCCCA 62.939 66.667 0.00 0.00 45.89 4.96
2812 2852 1.613630 ATGAGGCTGGAAGTCCCGT 60.614 57.895 0.00 0.00 41.78 5.28
2821 2861 1.897802 TGGAAGTCCCGTTTAGGAGTC 59.102 52.381 0.00 0.00 45.00 3.36
2824 2864 0.251519 AGTCCCGTTTAGGAGTCGGT 60.252 55.000 0.00 0.00 45.00 4.69
2825 2865 1.004745 AGTCCCGTTTAGGAGTCGGTA 59.995 52.381 0.00 0.00 45.00 4.02
2826 2866 1.403323 GTCCCGTTTAGGAGTCGGTAG 59.597 57.143 0.00 0.00 45.00 3.18
2828 2868 1.467920 CCGTTTAGGAGTCGGTAGGT 58.532 55.000 0.00 0.00 45.00 3.08
2829 2869 1.133790 CCGTTTAGGAGTCGGTAGGTG 59.866 57.143 0.00 0.00 45.00 4.00
2830 2870 1.133790 CGTTTAGGAGTCGGTAGGTGG 59.866 57.143 0.00 0.00 0.00 4.61
2831 2871 2.450476 GTTTAGGAGTCGGTAGGTGGA 58.550 52.381 0.00 0.00 0.00 4.02
2833 2873 2.905415 TAGGAGTCGGTAGGTGGAAA 57.095 50.000 0.00 0.00 0.00 3.13
2834 2874 1.264295 AGGAGTCGGTAGGTGGAAAC 58.736 55.000 0.00 0.00 0.00 2.78
2835 2875 0.971386 GGAGTCGGTAGGTGGAAACA 59.029 55.000 0.00 0.00 38.70 2.83
2836 2876 1.553704 GGAGTCGGTAGGTGGAAACAT 59.446 52.381 0.00 0.00 46.14 2.71
2837 2877 2.762327 GGAGTCGGTAGGTGGAAACATA 59.238 50.000 0.00 0.00 46.14 2.29
2840 2880 2.870411 GTCGGTAGGTGGAAACATATGC 59.130 50.000 1.58 0.00 46.14 3.14
2841 2881 2.158871 TCGGTAGGTGGAAACATATGCC 60.159 50.000 1.58 0.00 46.14 4.40
2842 2882 2.583143 GGTAGGTGGAAACATATGCCC 58.417 52.381 1.58 2.59 46.14 5.36
2843 2883 2.583143 GTAGGTGGAAACATATGCCCC 58.417 52.381 1.58 2.22 46.14 5.80
2844 2884 1.308877 AGGTGGAAACATATGCCCCT 58.691 50.000 1.58 2.88 46.14 4.79
2845 2885 1.063717 AGGTGGAAACATATGCCCCTG 60.064 52.381 1.58 0.00 46.14 4.45
2846 2886 1.402787 GTGGAAACATATGCCCCTGG 58.597 55.000 1.58 0.00 46.14 4.45
2847 2887 0.261402 TGGAAACATATGCCCCTGGG 59.739 55.000 5.50 5.50 33.40 4.45
2848 2888 0.261696 GGAAACATATGCCCCTGGGT 59.738 55.000 12.71 0.00 37.65 4.51
2849 2889 1.342975 GGAAACATATGCCCCTGGGTT 60.343 52.381 12.71 0.00 37.65 4.11
2851 2891 2.640284 AACATATGCCCCTGGGTTTT 57.360 45.000 12.71 0.00 37.65 2.43
2852 2892 2.159179 ACATATGCCCCTGGGTTTTC 57.841 50.000 12.71 0.00 37.65 2.29
2853 2893 1.645919 ACATATGCCCCTGGGTTTTCT 59.354 47.619 12.71 0.00 37.65 2.52
2854 2894 2.310538 CATATGCCCCTGGGTTTTCTC 58.689 52.381 12.71 0.00 37.65 2.87
2855 2895 1.377690 TATGCCCCTGGGTTTTCTCA 58.622 50.000 12.71 0.07 37.65 3.27
2858 2898 0.251787 GCCCCTGGGTTTTCTCATGT 60.252 55.000 12.71 0.00 37.65 3.21
2859 2899 1.549203 CCCCTGGGTTTTCTCATGTG 58.451 55.000 12.71 0.00 0.00 3.21
2860 2900 1.549203 CCCTGGGTTTTCTCATGTGG 58.451 55.000 3.97 0.00 0.00 4.17
2861 2901 1.549203 CCTGGGTTTTCTCATGTGGG 58.451 55.000 0.00 0.00 0.00 4.61
2862 2902 1.549203 CTGGGTTTTCTCATGTGGGG 58.451 55.000 0.00 0.00 0.00 4.96
2863 2903 1.075374 CTGGGTTTTCTCATGTGGGGA 59.925 52.381 0.00 0.00 0.00 4.81
2864 2904 1.075374 TGGGTTTTCTCATGTGGGGAG 59.925 52.381 0.00 0.00 0.00 4.30
2865 2905 1.616994 GGGTTTTCTCATGTGGGGAGG 60.617 57.143 0.00 0.00 33.18 4.30
2866 2906 1.354368 GGTTTTCTCATGTGGGGAGGA 59.646 52.381 0.00 0.00 33.18 3.71
2867 2907 2.225017 GGTTTTCTCATGTGGGGAGGAA 60.225 50.000 0.00 0.00 33.18 3.36
2868 2908 3.496331 GTTTTCTCATGTGGGGAGGAAA 58.504 45.455 0.00 0.00 37.49 3.13
2869 2909 4.089361 GTTTTCTCATGTGGGGAGGAAAT 58.911 43.478 0.00 0.00 40.84 2.17
2870 2910 5.261216 GTTTTCTCATGTGGGGAGGAAATA 58.739 41.667 0.00 0.00 40.84 1.40
2871 2911 5.732331 TTTCTCATGTGGGGAGGAAATAT 57.268 39.130 0.00 0.00 33.18 1.28
2897 2937 0.107456 CTCTGTGAGTGGTGGCTGTT 59.893 55.000 0.00 0.00 0.00 3.16
2938 2978 0.308376 GAGGTGGAGTCGACTATCGC 59.692 60.000 20.09 18.91 40.21 4.58
2946 2986 2.252346 TCGACTATCGCGAGGAGCC 61.252 63.158 16.66 5.98 44.76 4.70
3007 3047 1.508088 CCTGGGTTTTCTCATGCGC 59.492 57.895 0.00 0.00 0.00 6.09
3024 3064 1.679305 GCGGAGGACAGGTCAGAGA 60.679 63.158 1.41 0.00 0.00 3.10
3031 3071 2.247111 AGGACAGGTCAGAGATGGAGAT 59.753 50.000 1.41 0.00 0.00 2.75
3248 3496 1.153127 AGGCAACCGAACGGAACAA 60.153 52.632 20.14 0.00 38.96 2.83
3257 3505 3.802418 AACGGAACAACGCTCGGCT 62.802 57.895 0.00 0.00 37.37 5.52
3361 3609 0.752658 TCCTGGCTCATACGGTCATG 59.247 55.000 0.00 0.00 0.00 3.07
3436 3684 7.861630 TGACTTGTATGAAAACTCAGCTTTAC 58.138 34.615 0.00 0.00 0.00 2.01
3610 3858 3.287445 GGAACATGCCGTGCCAAT 58.713 55.556 0.00 0.00 44.03 3.16
3690 3938 5.123979 GGATCACTAATGGTCTGTTTGGTTC 59.876 44.000 0.00 0.00 36.10 3.62
3721 3969 3.954258 GACTAGCCCTGCCAAATTATTGT 59.046 43.478 0.00 0.00 34.60 2.71
3770 4020 5.163258 TGTTGCCTGAAATTTTGGTTACCAT 60.163 36.000 4.38 0.00 31.53 3.55
3792 4042 1.612442 GTGTGCACCCCTCCCTCTA 60.612 63.158 15.69 0.00 0.00 2.43
3830 4080 1.077663 AGTTGGCCAAATGAGGGTGAT 59.922 47.619 22.47 0.00 0.00 3.06
3889 4139 3.963129 CCAACATTTGGTAAGGCTAGGA 58.037 45.455 0.00 0.00 45.93 2.94
3927 4177 2.151202 CACCCTAATCGCAGTGTGTTT 58.849 47.619 3.13 4.42 0.00 2.83
4126 4386 8.066595 CAGAAACAGAATTCAGAACAGTAACAG 58.933 37.037 8.44 0.00 0.00 3.16
4244 4504 2.571653 TGGGTGAAGCAGTAGTAGCAAT 59.428 45.455 0.00 0.00 0.00 3.56
4502 4860 2.107950 AGCAATGGAATCGAACGGAA 57.892 45.000 0.00 0.00 0.00 4.30
4538 4896 1.067916 CGCATTATTTGGGCCAGCC 59.932 57.895 6.23 0.00 0.00 4.85
4563 4922 7.500559 CCCTAACTTTATAGCTGCATCTTTCTT 59.499 37.037 1.02 0.00 0.00 2.52
4564 4923 8.341173 CCTAACTTTATAGCTGCATCTTTCTTG 58.659 37.037 1.02 0.00 0.00 3.02
4565 4924 7.693969 AACTTTATAGCTGCATCTTTCTTGT 57.306 32.000 1.02 0.00 0.00 3.16
4566 4925 7.081526 ACTTTATAGCTGCATCTTTCTTGTG 57.918 36.000 1.02 0.00 0.00 3.33
4567 4926 6.881065 ACTTTATAGCTGCATCTTTCTTGTGA 59.119 34.615 1.02 0.00 0.00 3.58
4569 4928 8.962884 TTTATAGCTGCATCTTTCTTGTGATA 57.037 30.769 1.02 0.00 0.00 2.15
4820 5183 8.543774 AGAGAGATATTAGGCTTTTGAGTGAAA 58.456 33.333 0.00 0.00 0.00 2.69
4823 5186 9.113838 GAGATATTAGGCTTTTGAGTGAAATGA 57.886 33.333 0.00 0.00 0.00 2.57
4824 5187 9.118300 AGATATTAGGCTTTTGAGTGAAATGAG 57.882 33.333 0.00 0.00 0.00 2.90
4827 5190 4.723309 AGGCTTTTGAGTGAAATGAGTCT 58.277 39.130 0.00 0.00 0.00 3.24
4833 5196 7.041780 GCTTTTGAGTGAAATGAGTCTTGAGTA 60.042 37.037 0.00 0.00 0.00 2.59
5049 5412 3.003793 GTCTGCCTTTTCCTTGTCTGTTC 59.996 47.826 0.00 0.00 0.00 3.18
5078 5441 4.082125 GTTGATGGAAAGTGGGAACTGAT 58.918 43.478 0.00 0.00 0.00 2.90
5135 5499 9.665264 CTTTGTACTGTTCCAGAATTTTAAGTC 57.335 33.333 0.00 0.00 35.18 3.01
5170 5534 1.554836 TTGCCATGGTGGTTATGGTG 58.445 50.000 14.67 0.00 45.48 4.17
5174 5538 1.543607 CATGGTGGTTATGGTGTGCA 58.456 50.000 0.00 0.00 0.00 4.57
5198 5562 7.414873 GCAGATGCATTCTTCATTCTGTAGAAA 60.415 37.037 0.00 0.00 37.33 2.52
5262 5627 7.815840 TTGATCCATTGTTTCTTGTCAACTA 57.184 32.000 0.00 0.00 0.00 2.24
5263 5628 7.815840 TGATCCATTGTTTCTTGTCAACTAA 57.184 32.000 0.00 0.00 0.00 2.24
5292 5657 6.493116 CAAGTTCTCTGCCATATTGTTCATC 58.507 40.000 0.00 0.00 0.00 2.92
5296 5661 4.100035 TCTCTGCCATATTGTTCATCTCGT 59.900 41.667 0.00 0.00 0.00 4.18
5491 5856 0.383590 AGAGGATGAGCATGACGTCG 59.616 55.000 11.62 0.00 0.00 5.12
5898 6263 1.718396 GCGGTAGTTTTCGCCTTAGT 58.282 50.000 0.00 0.00 45.42 2.24
5899 6264 2.071540 GCGGTAGTTTTCGCCTTAGTT 58.928 47.619 0.00 0.00 45.42 2.24
5935 6300 8.382875 GGAAACAAAACTCTTTTCAGATTTGTG 58.617 33.333 8.93 0.00 39.65 3.33
6036 6401 3.308117 GGTGTGATGGACCTGACCAATTA 60.308 47.826 0.00 0.00 43.47 1.40
6042 6407 5.652014 TGATGGACCTGACCAATTAAATCAC 59.348 40.000 0.00 0.00 43.47 3.06
6162 6541 5.355596 TCGCAATTGTTTTCTCAAAATGGT 58.644 33.333 7.40 0.00 32.22 3.55
6186 6572 2.239907 ACCCTTGGTTAAGATGGAGAGC 59.760 50.000 0.00 0.00 35.92 4.09
6240 6626 8.422577 AATACCATTCCCTTTAAATATCCTGC 57.577 34.615 0.00 0.00 0.00 4.85
6248 6634 7.231467 TCCCTTTAAATATCCTGCCTTACATC 58.769 38.462 0.00 0.00 0.00 3.06
6304 6690 5.788531 GTGGTAAACGAAAGAATTGTCGATG 59.211 40.000 9.15 0.00 39.64 3.84
6311 6697 0.179073 AGAATTGTCGATGCCGGGAG 60.179 55.000 2.18 0.00 36.24 4.30
6336 6771 9.120538 AGAAGTTAGTTGATGTAATGTTTGTGT 57.879 29.630 0.00 0.00 0.00 3.72
6384 6819 0.250901 AGTGCGAGATTTGCCAACCT 60.251 50.000 0.00 0.00 0.00 3.50
6489 6924 2.158856 TCCTCGTCGGTCTAGCAAGATA 60.159 50.000 0.00 0.00 33.30 1.98
6681 7552 5.458595 TCATTACTCCTCAGCTATTCCAGA 58.541 41.667 0.00 0.00 0.00 3.86
6742 7613 5.104374 GCATTTCATCATACCACCAAACAG 58.896 41.667 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.676006 CTCCACCAACAAGTTGTGGTC 59.324 52.381 20.52 0.00 39.96 4.02
1 2 1.762708 CTCCACCAACAAGTTGTGGT 58.237 50.000 22.18 18.68 39.96 4.16
2 3 0.385390 GCTCCACCAACAAGTTGTGG 59.615 55.000 9.79 14.82 40.17 4.17
3 4 1.334869 GAGCTCCACCAACAAGTTGTG 59.665 52.381 9.79 0.07 38.85 3.33
4 5 1.680338 GAGCTCCACCAACAAGTTGT 58.320 50.000 0.87 1.64 38.85 3.32
5 6 0.954452 GGAGCTCCACCAACAAGTTG 59.046 55.000 28.43 0.00 36.83 3.16
6 7 0.535102 CGGAGCTCCACCAACAAGTT 60.535 55.000 31.67 0.00 35.14 2.66
7 8 1.071471 CGGAGCTCCACCAACAAGT 59.929 57.895 31.67 0.00 35.14 3.16
8 9 3.972227 CGGAGCTCCACCAACAAG 58.028 61.111 31.67 9.56 35.14 3.16
24 25 3.391382 AACCCCTCCTCGGAAGCG 61.391 66.667 0.00 0.00 33.16 4.68
25 26 2.269241 CAACCCCTCCTCGGAAGC 59.731 66.667 0.00 0.00 33.16 3.86
26 27 1.296715 CACAACCCCTCCTCGGAAG 59.703 63.158 0.00 0.00 33.16 3.46
27 28 1.460689 ACACAACCCCTCCTCGGAA 60.461 57.895 0.00 0.00 33.16 4.30
28 29 2.203182 ACACAACCCCTCCTCGGA 59.797 61.111 0.00 0.00 33.16 4.55
29 30 2.347490 CACACAACCCCTCCTCGG 59.653 66.667 0.00 0.00 0.00 4.63
30 31 2.347490 CCACACAACCCCTCCTCG 59.653 66.667 0.00 0.00 0.00 4.63
31 32 2.034221 GCCACACAACCCCTCCTC 59.966 66.667 0.00 0.00 0.00 3.71
32 33 3.580319 GGCCACACAACCCCTCCT 61.580 66.667 0.00 0.00 0.00 3.69
33 34 3.569200 GAGGCCACACAACCCCTCC 62.569 68.421 5.01 0.00 38.31 4.30
34 35 2.034221 GAGGCCACACAACCCCTC 59.966 66.667 5.01 0.00 37.33 4.30
35 36 2.084930 AAGAGGCCACACAACCCCT 61.085 57.895 5.01 0.00 0.00 4.79
36 37 1.903404 CAAGAGGCCACACAACCCC 60.903 63.158 5.01 0.00 0.00 4.95
37 38 2.564721 GCAAGAGGCCACACAACCC 61.565 63.158 5.01 0.00 36.11 4.11
38 39 1.391157 TTGCAAGAGGCCACACAACC 61.391 55.000 5.01 0.00 43.89 3.77
39 40 0.249031 GTTGCAAGAGGCCACACAAC 60.249 55.000 5.01 11.46 43.89 3.32
40 41 1.391157 GGTTGCAAGAGGCCACACAA 61.391 55.000 5.01 2.06 43.89 3.33
41 42 1.827789 GGTTGCAAGAGGCCACACA 60.828 57.895 5.01 0.00 43.89 3.72
42 43 2.564721 GGGTTGCAAGAGGCCACAC 61.565 63.158 5.01 0.00 43.89 3.82
43 44 2.203480 GGGTTGCAAGAGGCCACA 60.203 61.111 5.01 0.00 43.89 4.17
44 45 2.137177 TAGGGGTTGCAAGAGGCCAC 62.137 60.000 5.01 0.00 43.89 5.01
45 46 1.850289 TAGGGGTTGCAAGAGGCCA 60.850 57.895 5.01 0.00 43.89 5.36
46 47 1.077429 CTAGGGGTTGCAAGAGGCC 60.077 63.158 0.00 0.00 43.89 5.19
47 48 0.107459 CTCTAGGGGTTGCAAGAGGC 60.107 60.000 0.00 0.00 45.13 4.70
48 49 0.107459 GCTCTAGGGGTTGCAAGAGG 60.107 60.000 11.74 0.00 36.74 3.69
49 50 0.615331 TGCTCTAGGGGTTGCAAGAG 59.385 55.000 0.00 2.48 38.79 2.85
50 51 0.615331 CTGCTCTAGGGGTTGCAAGA 59.385 55.000 0.00 0.00 34.90 3.02
51 52 0.326264 ACTGCTCTAGGGGTTGCAAG 59.674 55.000 0.00 0.00 34.90 4.01
52 53 0.036732 CACTGCTCTAGGGGTTGCAA 59.963 55.000 0.00 0.00 34.90 4.08
53 54 1.127567 ACACTGCTCTAGGGGTTGCA 61.128 55.000 0.00 0.00 32.57 4.08
54 55 0.391793 GACACTGCTCTAGGGGTTGC 60.392 60.000 0.00 0.00 32.57 4.17
55 56 0.250513 GGACACTGCTCTAGGGGTTG 59.749 60.000 0.00 0.00 32.57 3.77
56 57 0.117340 AGGACACTGCTCTAGGGGTT 59.883 55.000 0.00 0.00 32.57 4.11
57 58 0.117340 AAGGACACTGCTCTAGGGGT 59.883 55.000 0.00 0.00 32.57 4.95
58 59 0.827368 GAAGGACACTGCTCTAGGGG 59.173 60.000 0.00 0.00 32.57 4.79
59 60 0.457851 CGAAGGACACTGCTCTAGGG 59.542 60.000 0.00 0.00 35.29 3.53
60 61 0.179124 GCGAAGGACACTGCTCTAGG 60.179 60.000 0.00 0.00 0.00 3.02
61 62 0.179124 GGCGAAGGACACTGCTCTAG 60.179 60.000 0.00 0.00 0.00 2.43
62 63 0.898326 TGGCGAAGGACACTGCTCTA 60.898 55.000 0.00 0.00 0.00 2.43
63 64 2.210013 TGGCGAAGGACACTGCTCT 61.210 57.895 0.00 0.00 0.00 4.09
64 65 2.343758 TGGCGAAGGACACTGCTC 59.656 61.111 0.00 0.00 0.00 4.26
70 71 3.950794 GATGCGGTGGCGAAGGACA 62.951 63.158 0.00 0.00 44.10 4.02
71 72 2.292794 TAGATGCGGTGGCGAAGGAC 62.293 60.000 0.00 0.00 44.10 3.85
72 73 1.609635 TTAGATGCGGTGGCGAAGGA 61.610 55.000 0.00 0.00 44.10 3.36
73 74 0.532862 ATTAGATGCGGTGGCGAAGG 60.533 55.000 0.00 0.00 44.10 3.46
74 75 0.583438 CATTAGATGCGGTGGCGAAG 59.417 55.000 0.00 0.00 44.10 3.79
75 76 2.689083 CATTAGATGCGGTGGCGAA 58.311 52.632 0.00 0.00 44.10 4.70
76 77 4.436515 CATTAGATGCGGTGGCGA 57.563 55.556 0.00 0.00 44.10 5.54
85 86 3.461061 ACCACATCGTCTGCATTAGATG 58.539 45.455 18.07 18.07 44.22 2.90
86 87 3.827008 ACCACATCGTCTGCATTAGAT 57.173 42.857 0.00 0.00 37.83 1.98
87 88 3.056179 TCAACCACATCGTCTGCATTAGA 60.056 43.478 0.00 0.00 0.00 2.10
88 89 3.261580 TCAACCACATCGTCTGCATTAG 58.738 45.455 0.00 0.00 0.00 1.73
89 90 3.326836 TCAACCACATCGTCTGCATTA 57.673 42.857 0.00 0.00 0.00 1.90
90 91 2.183478 TCAACCACATCGTCTGCATT 57.817 45.000 0.00 0.00 0.00 3.56
91 92 2.011947 CATCAACCACATCGTCTGCAT 58.988 47.619 0.00 0.00 0.00 3.96
92 93 1.270785 ACATCAACCACATCGTCTGCA 60.271 47.619 0.00 0.00 0.00 4.41
93 94 1.442769 ACATCAACCACATCGTCTGC 58.557 50.000 0.00 0.00 0.00 4.26
94 95 3.849911 ACTACATCAACCACATCGTCTG 58.150 45.455 0.00 0.00 0.00 3.51
95 96 4.495422 GAACTACATCAACCACATCGTCT 58.505 43.478 0.00 0.00 0.00 4.18
96 97 3.617263 GGAACTACATCAACCACATCGTC 59.383 47.826 0.00 0.00 0.00 4.20
97 98 3.596214 GGAACTACATCAACCACATCGT 58.404 45.455 0.00 0.00 0.00 3.73
98 99 2.603110 CGGAACTACATCAACCACATCG 59.397 50.000 0.00 0.00 0.00 3.84
99 100 2.351726 GCGGAACTACATCAACCACATC 59.648 50.000 0.00 0.00 0.00 3.06
100 101 2.027192 AGCGGAACTACATCAACCACAT 60.027 45.455 0.00 0.00 0.00 3.21
101 102 1.346395 AGCGGAACTACATCAACCACA 59.654 47.619 0.00 0.00 0.00 4.17
102 103 1.732259 CAGCGGAACTACATCAACCAC 59.268 52.381 0.00 0.00 0.00 4.16
103 104 1.338674 CCAGCGGAACTACATCAACCA 60.339 52.381 0.00 0.00 0.00 3.67
104 105 1.066430 TCCAGCGGAACTACATCAACC 60.066 52.381 0.00 0.00 0.00 3.77
105 106 2.380084 TCCAGCGGAACTACATCAAC 57.620 50.000 0.00 0.00 0.00 3.18
106 107 2.301870 ACTTCCAGCGGAACTACATCAA 59.698 45.455 6.01 0.00 36.71 2.57
107 108 1.899814 ACTTCCAGCGGAACTACATCA 59.100 47.619 6.01 0.00 36.71 3.07
108 109 2.094182 TCACTTCCAGCGGAACTACATC 60.094 50.000 6.01 0.00 36.71 3.06
109 110 1.899814 TCACTTCCAGCGGAACTACAT 59.100 47.619 6.01 0.00 36.71 2.29
110 111 1.000506 GTCACTTCCAGCGGAACTACA 59.999 52.381 6.01 0.00 36.71 2.74
111 112 1.672145 GGTCACTTCCAGCGGAACTAC 60.672 57.143 6.01 5.22 36.71 2.73
112 113 0.606604 GGTCACTTCCAGCGGAACTA 59.393 55.000 6.01 0.00 36.71 2.24
113 114 1.371558 GGTCACTTCCAGCGGAACT 59.628 57.895 6.01 0.00 36.71 3.01
114 115 1.671379 GGGTCACTTCCAGCGGAAC 60.671 63.158 6.01 0.00 36.71 3.62
115 116 1.827399 GAGGGTCACTTCCAGCGGAA 61.827 60.000 9.22 9.22 39.66 4.30
116 117 2.203788 AGGGTCACTTCCAGCGGA 60.204 61.111 0.00 0.00 0.00 5.54
117 118 2.266055 GAGGGTCACTTCCAGCGG 59.734 66.667 0.00 0.00 0.00 5.52
118 119 2.125912 CGAGGGTCACTTCCAGCG 60.126 66.667 0.00 0.00 0.00 5.18
119 120 2.435059 GCGAGGGTCACTTCCAGC 60.435 66.667 0.00 0.00 0.00 4.85
120 121 1.079543 CTGCGAGGGTCACTTCCAG 60.080 63.158 0.00 0.00 0.00 3.86
121 122 1.533033 TCTGCGAGGGTCACTTCCA 60.533 57.895 0.00 0.00 0.00 3.53
122 123 1.216710 CTCTGCGAGGGTCACTTCC 59.783 63.158 0.00 0.00 0.00 3.46
123 124 1.216710 CCTCTGCGAGGGTCACTTC 59.783 63.158 14.53 0.00 45.43 3.01
124 125 3.382111 CCTCTGCGAGGGTCACTT 58.618 61.111 14.53 0.00 45.43 3.16
132 133 1.703438 GCTTGTGATGCCTCTGCGAG 61.703 60.000 0.00 0.00 41.78 5.03
133 134 1.742880 GCTTGTGATGCCTCTGCGA 60.743 57.895 0.00 0.00 41.78 5.10
134 135 1.744368 AGCTTGTGATGCCTCTGCG 60.744 57.895 0.00 0.00 41.78 5.18
135 136 0.675837 TCAGCTTGTGATGCCTCTGC 60.676 55.000 0.00 0.00 38.26 4.26
136 137 1.370609 CTCAGCTTGTGATGCCTCTG 58.629 55.000 0.00 0.00 33.51 3.35
137 138 0.252479 CCTCAGCTTGTGATGCCTCT 59.748 55.000 0.00 0.00 33.51 3.69
138 139 0.035630 ACCTCAGCTTGTGATGCCTC 60.036 55.000 0.00 0.00 33.51 4.70
139 140 0.403271 AACCTCAGCTTGTGATGCCT 59.597 50.000 0.00 0.00 33.51 4.75
140 141 0.524862 CAACCTCAGCTTGTGATGCC 59.475 55.000 0.00 0.00 33.51 4.40
141 142 1.198637 GACAACCTCAGCTTGTGATGC 59.801 52.381 0.00 0.00 33.51 3.91
142 143 1.808945 GGACAACCTCAGCTTGTGATG 59.191 52.381 0.00 0.00 33.51 3.07
143 144 1.421268 TGGACAACCTCAGCTTGTGAT 59.579 47.619 0.00 0.00 33.51 3.06
144 145 0.836606 TGGACAACCTCAGCTTGTGA 59.163 50.000 0.00 0.00 37.04 3.58
145 146 1.808945 GATGGACAACCTCAGCTTGTG 59.191 52.381 0.00 0.00 37.04 3.33
146 147 1.701847 AGATGGACAACCTCAGCTTGT 59.298 47.619 0.00 0.00 37.04 3.16
147 148 2.486472 AGATGGACAACCTCAGCTTG 57.514 50.000 0.00 0.00 37.04 4.01
148 149 3.152341 CAAAGATGGACAACCTCAGCTT 58.848 45.455 0.00 0.00 40.72 3.74
149 150 2.787994 CAAAGATGGACAACCTCAGCT 58.212 47.619 0.00 0.00 37.04 4.24
162 163 2.283298 CACGAGATGTCCCCAAAGATG 58.717 52.381 0.00 0.00 0.00 2.90
163 164 1.210478 CCACGAGATGTCCCCAAAGAT 59.790 52.381 0.00 0.00 0.00 2.40
164 165 0.613260 CCACGAGATGTCCCCAAAGA 59.387 55.000 0.00 0.00 0.00 2.52
165 166 1.026718 GCCACGAGATGTCCCCAAAG 61.027 60.000 0.00 0.00 0.00 2.77
166 167 1.002624 GCCACGAGATGTCCCCAAA 60.003 57.895 0.00 0.00 0.00 3.28
167 168 2.668632 GCCACGAGATGTCCCCAA 59.331 61.111 0.00 0.00 0.00 4.12
168 169 3.770040 CGCCACGAGATGTCCCCA 61.770 66.667 0.00 0.00 0.00 4.96
184 185 4.735132 TGCTTCGTCTTCCCCGCG 62.735 66.667 0.00 0.00 0.00 6.46
185 186 2.815647 CTGCTTCGTCTTCCCCGC 60.816 66.667 0.00 0.00 0.00 6.13
186 187 2.125512 CCTGCTTCGTCTTCCCCG 60.126 66.667 0.00 0.00 0.00 5.73
187 188 2.269241 CCCTGCTTCGTCTTCCCC 59.731 66.667 0.00 0.00 0.00 4.81
188 189 1.376037 CACCCTGCTTCGTCTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
189 190 1.376037 CCACCCTGCTTCGTCTTCC 60.376 63.158 0.00 0.00 0.00 3.46
190 191 1.376037 CCCACCCTGCTTCGTCTTC 60.376 63.158 0.00 0.00 0.00 2.87
191 192 2.750350 CCCACCCTGCTTCGTCTT 59.250 61.111 0.00 0.00 0.00 3.01
192 193 3.322466 CCCCACCCTGCTTCGTCT 61.322 66.667 0.00 0.00 0.00 4.18
193 194 3.316573 CTCCCCACCCTGCTTCGTC 62.317 68.421 0.00 0.00 0.00 4.20
194 195 3.322466 CTCCCCACCCTGCTTCGT 61.322 66.667 0.00 0.00 0.00 3.85
195 196 4.101448 CCTCCCCACCCTGCTTCG 62.101 72.222 0.00 0.00 0.00 3.79
196 197 2.539081 AACCTCCCCACCCTGCTTC 61.539 63.158 0.00 0.00 0.00 3.86
197 198 2.452491 AACCTCCCCACCCTGCTT 60.452 61.111 0.00 0.00 0.00 3.91
198 199 3.260100 CAACCTCCCCACCCTGCT 61.260 66.667 0.00 0.00 0.00 4.24
199 200 3.146828 AACAACCTCCCCACCCTGC 62.147 63.158 0.00 0.00 0.00 4.85
200 201 1.228552 CAACAACCTCCCCACCCTG 60.229 63.158 0.00 0.00 0.00 4.45
201 202 3.146828 GCAACAACCTCCCCACCCT 62.147 63.158 0.00 0.00 0.00 4.34
202 203 2.600470 GCAACAACCTCCCCACCC 60.600 66.667 0.00 0.00 0.00 4.61
203 204 1.903404 CTGCAACAACCTCCCCACC 60.903 63.158 0.00 0.00 0.00 4.61
204 205 2.564721 GCTGCAACAACCTCCCCAC 61.565 63.158 0.00 0.00 0.00 4.61
205 206 2.203480 GCTGCAACAACCTCCCCA 60.203 61.111 0.00 0.00 0.00 4.96
206 207 2.203480 TGCTGCAACAACCTCCCC 60.203 61.111 0.00 0.00 0.00 4.81
207 208 2.924105 GCTGCTGCAACAACCTCCC 61.924 63.158 11.11 0.00 39.41 4.30
208 209 2.647297 GCTGCTGCAACAACCTCC 59.353 61.111 11.11 0.00 39.41 4.30
222 223 3.561213 CGCGATCTGCAGGTGCTG 61.561 66.667 15.13 2.87 46.97 4.41
223 224 4.827087 CCGCGATCTGCAGGTGCT 62.827 66.667 15.13 0.00 46.97 4.40
225 226 2.887568 GACCGCGATCTGCAGGTG 60.888 66.667 15.13 4.37 45.93 4.00
227 228 4.498520 ACGACCGCGATCTGCAGG 62.499 66.667 15.13 0.00 46.97 4.85
228 229 3.250323 CACGACCGCGATCTGCAG 61.250 66.667 8.23 7.63 46.97 4.41
229 230 4.794439 CCACGACCGCGATCTGCA 62.794 66.667 8.23 0.00 46.97 4.41
230 231 4.796231 ACCACGACCGCGATCTGC 62.796 66.667 8.23 0.00 41.64 4.26
231 232 2.880879 CACCACGACCGCGATCTG 60.881 66.667 8.23 0.00 41.64 2.90
232 233 3.060000 TCACCACGACCGCGATCT 61.060 61.111 8.23 0.00 41.64 2.75
233 234 2.879462 GTCACCACGACCGCGATC 60.879 66.667 8.23 0.00 38.85 3.69
243 244 2.617274 GCTTTGGAGGCGTCACCAC 61.617 63.158 5.40 0.00 43.14 4.16
244 245 2.281484 GCTTTGGAGGCGTCACCA 60.281 61.111 0.62 0.62 43.14 4.17
245 246 3.423154 CGCTTTGGAGGCGTCACC 61.423 66.667 8.91 0.00 46.37 4.02
251 252 0.519077 CAAGAAGACGCTTTGGAGGC 59.481 55.000 0.00 0.00 0.00 4.70
252 253 1.160137 CCAAGAAGACGCTTTGGAGG 58.840 55.000 0.00 0.00 0.00 4.30
253 254 1.801178 GTCCAAGAAGACGCTTTGGAG 59.199 52.381 5.49 0.00 30.88 3.86
254 255 1.878953 GTCCAAGAAGACGCTTTGGA 58.121 50.000 1.27 1.27 0.00 3.53
262 263 2.989840 CAGTCATGTCGTCCAAGAAGAC 59.010 50.000 4.05 4.05 40.44 3.01
263 264 2.029020 CCAGTCATGTCGTCCAAGAAGA 60.029 50.000 0.00 0.00 0.00 2.87
264 265 2.341257 CCAGTCATGTCGTCCAAGAAG 58.659 52.381 0.00 0.00 0.00 2.85
265 266 1.001974 CCCAGTCATGTCGTCCAAGAA 59.998 52.381 0.00 0.00 0.00 2.52
266 267 0.608130 CCCAGTCATGTCGTCCAAGA 59.392 55.000 0.00 0.00 0.00 3.02
267 268 0.391661 CCCCAGTCATGTCGTCCAAG 60.392 60.000 0.00 0.00 0.00 3.61
268 269 1.676968 CCCCAGTCATGTCGTCCAA 59.323 57.895 0.00 0.00 0.00 3.53
269 270 2.954684 GCCCCAGTCATGTCGTCCA 61.955 63.158 0.00 0.00 0.00 4.02
270 271 2.125106 GCCCCAGTCATGTCGTCC 60.125 66.667 0.00 0.00 0.00 4.79
271 272 2.125106 GGCCCCAGTCATGTCGTC 60.125 66.667 0.00 0.00 0.00 4.20
272 273 3.717294 GGGCCCCAGTCATGTCGT 61.717 66.667 12.23 0.00 0.00 4.34
273 274 3.266686 TTGGGCCCCAGTCATGTCG 62.267 63.158 22.27 0.00 33.81 4.35
274 275 1.379044 CTTGGGCCCCAGTCATGTC 60.379 63.158 22.27 0.00 33.81 3.06
275 276 2.765969 CTTGGGCCCCAGTCATGT 59.234 61.111 22.27 0.00 33.81 3.21
276 277 2.043652 CCTTGGGCCCCAGTCATG 60.044 66.667 22.27 0.11 33.81 3.07
277 278 4.066139 GCCTTGGGCCCCAGTCAT 62.066 66.667 22.27 0.00 44.06 3.06
300 301 0.531532 CGGAGCAAGACCTATGGCAG 60.532 60.000 0.00 0.00 0.00 4.85
301 302 1.522092 CGGAGCAAGACCTATGGCA 59.478 57.895 0.00 0.00 0.00 4.92
302 303 4.445699 CGGAGCAAGACCTATGGC 57.554 61.111 0.00 0.00 0.00 4.40
315 316 3.432051 GACCCATGGTCGAGCGGAG 62.432 68.421 11.73 4.22 43.14 4.63
316 317 3.458163 GACCCATGGTCGAGCGGA 61.458 66.667 11.73 0.00 43.14 5.54
324 325 3.661648 GGCCCTGTGACCCATGGT 61.662 66.667 11.73 0.00 39.44 3.55
325 326 3.660571 TGGCCCTGTGACCCATGG 61.661 66.667 4.14 4.14 32.35 3.66
326 327 2.361610 GTGGCCCTGTGACCCATG 60.362 66.667 0.00 0.00 0.00 3.66
327 328 3.661648 GGTGGCCCTGTGACCCAT 61.662 66.667 0.00 0.00 0.00 4.00
329 330 3.661648 ATGGTGGCCCTGTGACCC 61.662 66.667 0.00 0.00 0.00 4.46
330 331 2.361610 CATGGTGGCCCTGTGACC 60.362 66.667 0.00 0.01 0.00 4.02
331 332 1.377725 CTCATGGTGGCCCTGTGAC 60.378 63.158 0.00 0.00 0.00 3.67
332 333 3.080641 CTCATGGTGGCCCTGTGA 58.919 61.111 0.00 0.00 0.00 3.58
333 334 2.753043 GCTCATGGTGGCCCTGTG 60.753 66.667 0.00 0.00 0.00 3.66
334 335 4.415150 CGCTCATGGTGGCCCTGT 62.415 66.667 0.00 0.00 0.00 4.00
340 341 4.864334 GGAGGGCGCTCATGGTGG 62.864 72.222 29.41 0.00 0.00 4.61
365 366 4.593864 GAGGTCTCATCCGGGCGC 62.594 72.222 0.00 0.00 0.00 6.53
366 367 3.917760 GGAGGTCTCATCCGGGCG 61.918 72.222 0.00 0.00 0.00 6.13
367 368 2.444895 AGGAGGTCTCATCCGGGC 60.445 66.667 0.00 0.00 42.02 6.13
368 369 1.075970 TCAGGAGGTCTCATCCGGG 60.076 63.158 0.00 0.00 42.02 5.73
369 370 1.395826 GGTCAGGAGGTCTCATCCGG 61.396 65.000 0.00 0.00 42.02 5.14
370 371 1.729470 CGGTCAGGAGGTCTCATCCG 61.729 65.000 0.14 0.00 42.02 4.18
371 372 2.022240 GCGGTCAGGAGGTCTCATCC 62.022 65.000 0.14 0.00 37.07 3.51
372 373 1.439644 GCGGTCAGGAGGTCTCATC 59.560 63.158 0.14 0.00 0.00 2.92
373 374 2.060980 GGCGGTCAGGAGGTCTCAT 61.061 63.158 0.14 0.00 0.00 2.90
374 375 2.680352 GGCGGTCAGGAGGTCTCA 60.680 66.667 0.14 0.00 0.00 3.27
375 376 2.680352 TGGCGGTCAGGAGGTCTC 60.680 66.667 0.00 0.00 0.00 3.36
376 377 2.997897 GTGGCGGTCAGGAGGTCT 60.998 66.667 0.00 0.00 0.00 3.85
377 378 4.436998 CGTGGCGGTCAGGAGGTC 62.437 72.222 0.00 0.00 33.39 3.85
391 392 3.948086 GAGTCGTCTGGCGTCCGTG 62.948 68.421 0.09 0.00 42.13 4.94
392 393 3.735029 GAGTCGTCTGGCGTCCGT 61.735 66.667 0.09 0.00 42.13 4.69
393 394 4.813526 CGAGTCGTCTGGCGTCCG 62.814 72.222 3.82 0.14 42.13 4.79
394 395 2.852431 CTTCGAGTCGTCTGGCGTCC 62.852 65.000 13.12 0.00 42.13 4.79
395 396 1.512310 CTTCGAGTCGTCTGGCGTC 60.512 63.158 13.12 0.00 42.13 5.19
396 397 2.561885 CTTCGAGTCGTCTGGCGT 59.438 61.111 13.12 0.00 42.13 5.68
397 398 2.876645 GCTTCGAGTCGTCTGGCG 60.877 66.667 13.12 0.00 43.01 5.69
398 399 1.803519 CTGCTTCGAGTCGTCTGGC 60.804 63.158 13.12 12.48 0.00 4.85
399 400 1.153939 CCTGCTTCGAGTCGTCTGG 60.154 63.158 13.12 11.90 0.00 3.86
400 401 0.179176 CTCCTGCTTCGAGTCGTCTG 60.179 60.000 13.12 5.23 0.00 3.51
401 402 1.309499 CCTCCTGCTTCGAGTCGTCT 61.309 60.000 13.12 0.00 0.00 4.18
402 403 1.137825 CCTCCTGCTTCGAGTCGTC 59.862 63.158 13.12 3.99 0.00 4.20
403 404 1.303398 TCCTCCTGCTTCGAGTCGT 60.303 57.895 13.12 0.00 0.00 4.34
404 405 1.027255 TCTCCTCCTGCTTCGAGTCG 61.027 60.000 6.09 6.09 0.00 4.18
405 406 1.066908 CATCTCCTCCTGCTTCGAGTC 59.933 57.143 0.00 0.00 0.00 3.36
406 407 1.110442 CATCTCCTCCTGCTTCGAGT 58.890 55.000 0.00 0.00 0.00 4.18
407 408 0.249405 GCATCTCCTCCTGCTTCGAG 60.249 60.000 0.00 0.00 35.49 4.04
408 409 1.680522 GGCATCTCCTCCTGCTTCGA 61.681 60.000 0.00 0.00 38.45 3.71
409 410 1.227497 GGCATCTCCTCCTGCTTCG 60.227 63.158 0.00 0.00 38.45 3.79
410 411 0.254178 TTGGCATCTCCTCCTGCTTC 59.746 55.000 0.00 0.00 38.45 3.86
411 412 0.255318 CTTGGCATCTCCTCCTGCTT 59.745 55.000 0.00 0.00 38.45 3.91
412 413 1.913722 CTTGGCATCTCCTCCTGCT 59.086 57.895 0.00 0.00 38.45 4.24
413 414 1.823041 GCTTGGCATCTCCTCCTGC 60.823 63.158 0.00 0.00 37.66 4.85
414 415 1.153005 GGCTTGGCATCTCCTCCTG 60.153 63.158 0.00 0.00 35.26 3.86
415 416 2.381941 GGGCTTGGCATCTCCTCCT 61.382 63.158 0.00 0.00 35.26 3.69
416 417 2.194326 GGGCTTGGCATCTCCTCC 59.806 66.667 0.00 0.00 35.26 4.30
417 418 1.153005 CTGGGCTTGGCATCTCCTC 60.153 63.158 0.00 0.00 35.26 3.71
418 419 1.617536 TCTGGGCTTGGCATCTCCT 60.618 57.895 0.00 0.00 35.26 3.69
419 420 1.153005 CTCTGGGCTTGGCATCTCC 60.153 63.158 0.00 0.00 0.00 3.71
420 421 0.463474 GTCTCTGGGCTTGGCATCTC 60.463 60.000 0.00 0.00 0.00 2.75
421 422 1.606531 GTCTCTGGGCTTGGCATCT 59.393 57.895 0.00 0.00 0.00 2.90
422 423 1.452833 GGTCTCTGGGCTTGGCATC 60.453 63.158 0.00 0.00 0.00 3.91
423 424 2.233566 TGGTCTCTGGGCTTGGCAT 61.234 57.895 0.00 0.00 0.00 4.40
424 425 2.853542 TGGTCTCTGGGCTTGGCA 60.854 61.111 0.00 0.00 0.00 4.92
425 426 2.360475 GTGGTCTCTGGGCTTGGC 60.360 66.667 0.00 0.00 0.00 4.52
426 427 2.352805 GGTGGTCTCTGGGCTTGG 59.647 66.667 0.00 0.00 0.00 3.61
427 428 1.002868 CTGGTGGTCTCTGGGCTTG 60.003 63.158 0.00 0.00 0.00 4.01
428 429 2.900106 GCTGGTGGTCTCTGGGCTT 61.900 63.158 0.00 0.00 0.00 4.35
429 430 3.325753 GCTGGTGGTCTCTGGGCT 61.326 66.667 0.00 0.00 0.00 5.19
430 431 4.416738 GGCTGGTGGTCTCTGGGC 62.417 72.222 0.00 0.00 0.00 5.36
431 432 4.087892 CGGCTGGTGGTCTCTGGG 62.088 72.222 0.00 0.00 0.00 4.45
432 433 4.087892 CCGGCTGGTGGTCTCTGG 62.088 72.222 2.29 0.00 0.00 3.86
459 460 3.391665 CTGCTGCCCCTTCCCGTAG 62.392 68.421 0.00 0.00 0.00 3.51
460 461 3.399181 CTGCTGCCCCTTCCCGTA 61.399 66.667 0.00 0.00 0.00 4.02
475 476 3.058160 CAAGCCCCAACTCCGCTG 61.058 66.667 0.00 0.00 31.92 5.18
476 477 3.249189 TCAAGCCCCAACTCCGCT 61.249 61.111 0.00 0.00 0.00 5.52
477 478 2.747855 CTCAAGCCCCAACTCCGC 60.748 66.667 0.00 0.00 0.00 5.54
478 479 2.045926 CCTCAAGCCCCAACTCCG 60.046 66.667 0.00 0.00 0.00 4.63
479 480 2.361737 GCCTCAAGCCCCAACTCC 60.362 66.667 0.00 0.00 34.35 3.85
488 489 1.735376 CTGATGCCATGGCCTCAAGC 61.735 60.000 34.85 21.40 43.14 4.01
489 490 0.106868 TCTGATGCCATGGCCTCAAG 60.107 55.000 34.85 28.39 43.14 3.02
490 491 0.554305 ATCTGATGCCATGGCCTCAA 59.446 50.000 34.85 27.04 43.14 3.02
491 492 0.109913 GATCTGATGCCATGGCCTCA 59.890 55.000 33.87 33.87 41.96 3.86
492 493 0.608582 GGATCTGATGCCATGGCCTC 60.609 60.000 33.44 31.12 41.09 4.70
493 494 1.358051 TGGATCTGATGCCATGGCCT 61.358 55.000 33.44 24.85 41.09 5.19
494 495 1.152138 TGGATCTGATGCCATGGCC 59.848 57.895 33.44 19.61 41.09 5.36
495 496 1.512996 CGTGGATCTGATGCCATGGC 61.513 60.000 30.54 30.54 37.50 4.40
496 497 1.512996 GCGTGGATCTGATGCCATGG 61.513 60.000 7.63 7.63 40.69 3.66
497 498 1.838568 CGCGTGGATCTGATGCCATG 61.839 60.000 17.10 17.10 42.72 3.66
498 499 1.596203 CGCGTGGATCTGATGCCAT 60.596 57.895 6.70 0.00 36.41 4.40
499 500 2.202919 CGCGTGGATCTGATGCCA 60.203 61.111 6.70 5.82 0.00 4.92
500 501 1.493950 CTTCGCGTGGATCTGATGCC 61.494 60.000 5.77 3.36 0.00 4.40
501 502 1.493950 CCTTCGCGTGGATCTGATGC 61.494 60.000 5.77 1.79 0.00 3.91
502 503 0.103026 TCCTTCGCGTGGATCTGATG 59.897 55.000 16.90 0.00 0.00 3.07
503 504 1.043816 ATCCTTCGCGTGGATCTGAT 58.956 50.000 23.35 8.68 39.96 2.90
504 505 1.687563 TATCCTTCGCGTGGATCTGA 58.312 50.000 29.03 16.06 42.74 3.27
505 506 2.398498 CTTATCCTTCGCGTGGATCTG 58.602 52.381 29.03 21.35 42.74 2.90
506 507 1.341531 CCTTATCCTTCGCGTGGATCT 59.658 52.381 29.03 16.63 42.74 2.75
507 508 1.605712 CCCTTATCCTTCGCGTGGATC 60.606 57.143 29.03 0.00 42.74 3.36
508 509 0.393077 CCCTTATCCTTCGCGTGGAT 59.607 55.000 28.49 28.49 45.37 3.41
509 510 1.682451 CCCCTTATCCTTCGCGTGGA 61.682 60.000 21.38 21.38 38.06 4.02
510 511 1.227556 CCCCTTATCCTTCGCGTGG 60.228 63.158 5.77 10.41 0.00 4.94
511 512 0.177141 TTCCCCTTATCCTTCGCGTG 59.823 55.000 5.77 0.00 0.00 5.34
512 513 0.464452 CTTCCCCTTATCCTTCGCGT 59.536 55.000 5.77 0.00 0.00 6.01
513 514 0.249911 CCTTCCCCTTATCCTTCGCG 60.250 60.000 0.00 0.00 0.00 5.87
514 515 0.837940 ACCTTCCCCTTATCCTTCGC 59.162 55.000 0.00 0.00 0.00 4.70
515 516 1.141053 CCACCTTCCCCTTATCCTTCG 59.859 57.143 0.00 0.00 0.00 3.79
516 517 1.133761 GCCACCTTCCCCTTATCCTTC 60.134 57.143 0.00 0.00 0.00 3.46
517 518 0.927029 GCCACCTTCCCCTTATCCTT 59.073 55.000 0.00 0.00 0.00 3.36
518 519 0.994050 GGCCACCTTCCCCTTATCCT 60.994 60.000 0.00 0.00 0.00 3.24
519 520 1.537172 GGCCACCTTCCCCTTATCC 59.463 63.158 0.00 0.00 0.00 2.59
520 521 1.148498 CGGCCACCTTCCCCTTATC 59.852 63.158 2.24 0.00 0.00 1.75
521 522 1.307517 TCGGCCACCTTCCCCTTAT 60.308 57.895 2.24 0.00 0.00 1.73
522 523 2.123180 TCGGCCACCTTCCCCTTA 59.877 61.111 2.24 0.00 0.00 2.69
523 524 3.647771 GTCGGCCACCTTCCCCTT 61.648 66.667 2.24 0.00 0.00 3.95
526 527 4.754667 GACGTCGGCCACCTTCCC 62.755 72.222 2.24 0.00 0.00 3.97
561 562 4.692475 GACGTTCACCCCCACCCG 62.692 72.222 0.00 0.00 0.00 5.28
562 563 4.692475 CGACGTTCACCCCCACCC 62.692 72.222 0.00 0.00 0.00 4.61
563 564 4.692475 CCGACGTTCACCCCCACC 62.692 72.222 0.00 0.00 0.00 4.61
575 576 2.483044 CGTTACTTCGACGCCGACG 61.483 63.158 1.88 1.88 45.50 5.12
576 577 1.441016 ACGTTACTTCGACGCCGAC 60.441 57.895 0.00 0.00 45.50 4.79
577 578 1.440850 CACGTTACTTCGACGCCGA 60.441 57.895 0.00 0.00 43.92 5.54
578 579 3.051171 GCACGTTACTTCGACGCCG 62.051 63.158 0.00 0.00 43.92 6.46
579 580 2.767697 GCACGTTACTTCGACGCC 59.232 61.111 0.00 0.00 43.92 5.68
580 581 2.385361 CGCACGTTACTTCGACGC 59.615 61.111 0.00 0.00 43.92 5.19
581 582 3.051171 GCCGCACGTTACTTCGACG 62.051 63.158 0.00 0.00 45.46 5.12
582 583 2.767697 GCCGCACGTTACTTCGAC 59.232 61.111 0.00 0.00 34.70 4.20
583 584 2.801996 CGCCGCACGTTACTTCGA 60.802 61.111 0.00 0.00 36.87 3.71
584 585 3.834373 CCGCCGCACGTTACTTCG 61.834 66.667 0.00 0.00 41.42 3.79
585 586 2.431260 TCCGCCGCACGTTACTTC 60.431 61.111 0.00 0.00 41.42 3.01
586 587 2.431942 CTCCGCCGCACGTTACTT 60.432 61.111 0.00 0.00 41.42 2.24
587 588 3.338126 CTCTCCGCCGCACGTTACT 62.338 63.158 0.00 0.00 41.42 2.24
588 589 2.879462 CTCTCCGCCGCACGTTAC 60.879 66.667 0.00 0.00 41.42 2.50
589 590 4.124351 CCTCTCCGCCGCACGTTA 62.124 66.667 0.00 0.00 41.42 3.18
596 597 4.824515 ACCTCTCCCTCTCCGCCG 62.825 72.222 0.00 0.00 0.00 6.46
597 598 3.151022 CACCTCTCCCTCTCCGCC 61.151 72.222 0.00 0.00 0.00 6.13
598 599 3.151022 CCACCTCTCCCTCTCCGC 61.151 72.222 0.00 0.00 0.00 5.54
599 600 2.443016 CCCACCTCTCCCTCTCCG 60.443 72.222 0.00 0.00 0.00 4.63
600 601 2.041405 CCCCACCTCTCCCTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
601 602 0.547954 AAACCCCACCTCTCCCTCTC 60.548 60.000 0.00 0.00 0.00 3.20
602 603 0.103876 AAAACCCCACCTCTCCCTCT 60.104 55.000 0.00 0.00 0.00 3.69
603 604 0.038310 CAAAACCCCACCTCTCCCTC 59.962 60.000 0.00 0.00 0.00 4.30
604 605 0.701310 ACAAAACCCCACCTCTCCCT 60.701 55.000 0.00 0.00 0.00 4.20
605 606 0.251209 GACAAAACCCCACCTCTCCC 60.251 60.000 0.00 0.00 0.00 4.30
606 607 0.771755 AGACAAAACCCCACCTCTCC 59.228 55.000 0.00 0.00 0.00 3.71
607 608 1.271434 GGAGACAAAACCCCACCTCTC 60.271 57.143 0.00 0.00 0.00 3.20
608 609 0.771755 GGAGACAAAACCCCACCTCT 59.228 55.000 0.00 0.00 0.00 3.69
609 610 0.771755 AGGAGACAAAACCCCACCTC 59.228 55.000 0.00 0.00 0.00 3.85
610 611 1.703513 GTAGGAGACAAAACCCCACCT 59.296 52.381 0.00 0.00 0.00 4.00
611 612 1.703513 AGTAGGAGACAAAACCCCACC 59.296 52.381 0.00 0.00 0.00 4.61
612 613 3.055312 CCTAGTAGGAGACAAAACCCCAC 60.055 52.174 11.09 0.00 37.67 4.61
613 614 3.178865 CCTAGTAGGAGACAAAACCCCA 58.821 50.000 11.09 0.00 37.67 4.96
614 615 2.093075 GCCTAGTAGGAGACAAAACCCC 60.093 54.545 21.02 0.00 37.67 4.95
615 616 2.570302 TGCCTAGTAGGAGACAAAACCC 59.430 50.000 21.02 0.00 37.67 4.11
616 617 3.261137 AGTGCCTAGTAGGAGACAAAACC 59.739 47.826 21.02 0.00 37.67 3.27
617 618 4.538746 AGTGCCTAGTAGGAGACAAAAC 57.461 45.455 21.02 5.69 37.67 2.43
618 619 4.020485 GGAAGTGCCTAGTAGGAGACAAAA 60.020 45.833 21.02 0.00 37.67 2.44
619 620 3.514309 GGAAGTGCCTAGTAGGAGACAAA 59.486 47.826 21.02 0.00 37.67 2.83
620 621 3.097614 GGAAGTGCCTAGTAGGAGACAA 58.902 50.000 21.02 0.00 37.67 3.18
621 622 2.736347 GGAAGTGCCTAGTAGGAGACA 58.264 52.381 21.02 5.64 37.67 3.41
633 634 2.479566 TGTGAGATGAAGGAAGTGCC 57.520 50.000 0.00 0.00 0.00 5.01
634 635 7.519649 GCTTATATTGTGAGATGAAGGAAGTGC 60.520 40.741 0.00 0.00 0.00 4.40
635 636 7.307042 CGCTTATATTGTGAGATGAAGGAAGTG 60.307 40.741 0.00 0.00 0.00 3.16
636 637 6.703607 CGCTTATATTGTGAGATGAAGGAAGT 59.296 38.462 0.00 0.00 0.00 3.01
637 638 6.347240 GCGCTTATATTGTGAGATGAAGGAAG 60.347 42.308 0.00 0.00 0.00 3.46
638 639 5.466728 GCGCTTATATTGTGAGATGAAGGAA 59.533 40.000 0.00 0.00 0.00 3.36
639 640 4.991056 GCGCTTATATTGTGAGATGAAGGA 59.009 41.667 0.00 0.00 0.00 3.36
640 641 4.143242 CGCGCTTATATTGTGAGATGAAGG 60.143 45.833 5.56 0.00 0.00 3.46
641 642 4.445718 ACGCGCTTATATTGTGAGATGAAG 59.554 41.667 5.73 0.00 0.00 3.02
642 643 4.368315 ACGCGCTTATATTGTGAGATGAA 58.632 39.130 5.73 0.00 0.00 2.57
643 644 3.977427 ACGCGCTTATATTGTGAGATGA 58.023 40.909 5.73 0.00 0.00 2.92
644 645 4.715520 AACGCGCTTATATTGTGAGATG 57.284 40.909 5.73 0.00 0.00 2.90
645 646 5.734855 AAAACGCGCTTATATTGTGAGAT 57.265 34.783 5.73 0.00 0.00 2.75
646 647 5.120986 TCAAAAACGCGCTTATATTGTGAGA 59.879 36.000 5.73 0.00 0.00 3.27
647 648 5.225129 GTCAAAAACGCGCTTATATTGTGAG 59.775 40.000 5.73 0.00 0.00 3.51
648 649 5.083389 GTCAAAAACGCGCTTATATTGTGA 58.917 37.500 5.73 0.00 0.00 3.58
649 650 4.848841 TGTCAAAAACGCGCTTATATTGTG 59.151 37.500 5.73 0.00 0.00 3.33
650 651 4.849383 GTGTCAAAAACGCGCTTATATTGT 59.151 37.500 5.73 0.00 0.00 2.71
651 652 4.848841 TGTGTCAAAAACGCGCTTATATTG 59.151 37.500 5.73 2.04 41.49 1.90
652 653 5.037015 TGTGTCAAAAACGCGCTTATATT 57.963 34.783 5.73 0.00 41.49 1.28
653 654 4.671880 TGTGTCAAAAACGCGCTTATAT 57.328 36.364 5.73 0.00 41.49 0.86
654 655 4.212911 GTTGTGTCAAAAACGCGCTTATA 58.787 39.130 5.73 0.00 41.49 0.98
655 656 3.040099 GTTGTGTCAAAAACGCGCTTAT 58.960 40.909 5.73 0.00 41.49 1.73
656 657 2.442424 GTTGTGTCAAAAACGCGCTTA 58.558 42.857 5.73 0.00 41.49 3.09
657 658 1.264672 GTTGTGTCAAAAACGCGCTT 58.735 45.000 5.73 0.00 41.49 4.68
658 659 0.859788 CGTTGTGTCAAAAACGCGCT 60.860 50.000 5.73 0.00 42.17 5.92
659 660 1.546673 CGTTGTGTCAAAAACGCGC 59.453 52.632 5.73 0.00 42.17 6.86
663 664 8.794406 CCATAATATAAGCGTTGTGTCAAAAAC 58.206 33.333 0.00 0.00 0.00 2.43
664 665 7.971168 CCCATAATATAAGCGTTGTGTCAAAAA 59.029 33.333 0.00 0.00 0.00 1.94
665 666 7.337184 TCCCATAATATAAGCGTTGTGTCAAAA 59.663 33.333 0.00 0.00 0.00 2.44
666 667 6.824196 TCCCATAATATAAGCGTTGTGTCAAA 59.176 34.615 0.00 0.00 0.00 2.69
667 668 6.259167 GTCCCATAATATAAGCGTTGTGTCAA 59.741 38.462 0.00 0.00 0.00 3.18
668 669 5.756347 GTCCCATAATATAAGCGTTGTGTCA 59.244 40.000 0.00 0.00 0.00 3.58
669 670 5.107607 CGTCCCATAATATAAGCGTTGTGTC 60.108 44.000 0.00 0.00 0.00 3.67
670 671 4.748102 CGTCCCATAATATAAGCGTTGTGT 59.252 41.667 0.00 0.00 0.00 3.72
671 672 4.151689 CCGTCCCATAATATAAGCGTTGTG 59.848 45.833 0.00 0.00 0.00 3.33
672 673 4.039488 TCCGTCCCATAATATAAGCGTTGT 59.961 41.667 0.00 0.00 0.00 3.32
673 674 4.562082 TCCGTCCCATAATATAAGCGTTG 58.438 43.478 0.00 0.00 0.00 4.10
674 675 4.525487 TCTCCGTCCCATAATATAAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
675 676 4.084287 TCTCCGTCCCATAATATAAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
676 677 4.158025 ACTCTCCGTCCCATAATATAAGCG 59.842 45.833 0.00 0.00 0.00 4.68
677 678 5.662674 ACTCTCCGTCCCATAATATAAGC 57.337 43.478 0.00 0.00 0.00 3.09
678 679 6.890814 ACCTACTCTCCGTCCCATAATATAAG 59.109 42.308 0.00 0.00 0.00 1.73
679 680 6.797707 ACCTACTCTCCGTCCCATAATATAA 58.202 40.000 0.00 0.00 0.00 0.98
680 681 6.398655 ACCTACTCTCCGTCCCATAATATA 57.601 41.667 0.00 0.00 0.00 0.86
681 682 5.272405 ACCTACTCTCCGTCCCATAATAT 57.728 43.478 0.00 0.00 0.00 1.28
682 683 4.736611 ACCTACTCTCCGTCCCATAATA 57.263 45.455 0.00 0.00 0.00 0.98
683 684 3.614568 ACCTACTCTCCGTCCCATAAT 57.385 47.619 0.00 0.00 0.00 1.28
684 685 3.393426 AACCTACTCTCCGTCCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
685 686 3.393426 AAACCTACTCTCCGTCCCATA 57.607 47.619 0.00 0.00 0.00 2.74
686 687 2.249309 AAACCTACTCTCCGTCCCAT 57.751 50.000 0.00 0.00 0.00 4.00
687 688 2.019807 AAAACCTACTCTCCGTCCCA 57.980 50.000 0.00 0.00 0.00 4.37
745 746 0.602638 TGTTCGAGTTCGCAATGGCT 60.603 50.000 0.00 0.00 39.60 4.75
746 747 0.452784 GTGTTCGAGTTCGCAATGGC 60.453 55.000 0.00 0.00 39.60 4.40
747 748 1.148310 AGTGTTCGAGTTCGCAATGG 58.852 50.000 0.00 0.00 39.60 3.16
748 749 2.032894 ACAAGTGTTCGAGTTCGCAATG 60.033 45.455 0.00 0.00 39.60 2.82
749 750 2.210116 ACAAGTGTTCGAGTTCGCAAT 58.790 42.857 0.00 0.00 39.60 3.56
750 751 1.591158 GACAAGTGTTCGAGTTCGCAA 59.409 47.619 0.00 0.00 39.60 4.85
751 752 1.205657 GACAAGTGTTCGAGTTCGCA 58.794 50.000 0.00 0.00 39.60 5.10
753 754 2.460918 AGTGACAAGTGTTCGAGTTCG 58.539 47.619 0.00 0.00 41.45 3.95
754 755 3.707793 AGAGTGACAAGTGTTCGAGTTC 58.292 45.455 0.00 0.00 0.00 3.01
755 756 3.491104 GGAGAGTGACAAGTGTTCGAGTT 60.491 47.826 0.00 0.00 0.00 3.01
799 809 3.208884 GATGGACGGACGGGATCGG 62.209 68.421 0.00 0.00 41.39 4.18
863 874 1.978580 AGGTCAAAGGACAAGACGGAT 59.021 47.619 0.00 0.00 46.17 4.18
867 878 2.289756 GGAGGAGGTCAAAGGACAAGAC 60.290 54.545 0.00 0.00 46.17 3.01
868 879 1.978580 GGAGGAGGTCAAAGGACAAGA 59.021 52.381 0.00 0.00 46.17 3.02
869 880 1.003696 GGGAGGAGGTCAAAGGACAAG 59.996 57.143 0.00 0.00 46.17 3.16
871 882 0.840722 GGGGAGGAGGTCAAAGGACA 60.841 60.000 0.00 0.00 46.17 4.02
872 883 1.563577 GGGGGAGGAGGTCAAAGGAC 61.564 65.000 0.00 0.00 43.55 3.85
873 884 1.229853 GGGGGAGGAGGTCAAAGGA 60.230 63.158 0.00 0.00 0.00 3.36
889 900 1.871418 TTGATCTGACCAGAGAGGGG 58.129 55.000 5.90 0.00 43.89 4.79
936 950 1.357761 GGGAAAGGGAAATGGAGTGGA 59.642 52.381 0.00 0.00 0.00 4.02
1133 1147 0.032017 GGCCTTACCAGAGAGGAGGA 60.032 60.000 0.00 0.00 41.22 3.71
1248 1262 1.606601 CCTCCACACTCGTCCCTGA 60.607 63.158 0.00 0.00 0.00 3.86
1385 1399 2.945668 GAGACATTACAGCCCATTCCAC 59.054 50.000 0.00 0.00 0.00 4.02
1402 1416 2.457366 AACCACAACCAGATCGAGAC 57.543 50.000 0.00 0.00 0.00 3.36
1567 1596 8.433421 ACTACCAATCAATAAATTAGACACCG 57.567 34.615 0.00 0.00 0.00 4.94
1668 1697 2.223144 TGAACTGCGTGCATAGACAAAC 59.777 45.455 0.00 0.00 0.00 2.93
1714 1743 2.240493 AGAACACCCACGAGTTTCTG 57.760 50.000 0.00 0.00 0.00 3.02
1864 1900 4.296621 AGGTTTACACCCTTGGTCATAC 57.703 45.455 0.00 0.00 45.63 2.39
2128 2165 0.188342 ACTGGAGGGTTGCCAAACAT 59.812 50.000 0.00 0.00 38.10 2.71
2227 2264 0.878416 TGCGATTTTGTACTGTGGGC 59.122 50.000 0.00 0.00 0.00 5.36
2277 2314 8.902806 GGTAATATTCTCCAACAATGTGAATCA 58.097 33.333 0.00 0.00 33.17 2.57
2279 2316 7.838696 TGGGTAATATTCTCCAACAATGTGAAT 59.161 33.333 7.09 2.91 34.46 2.57
2353 2392 1.600023 GGGTTTGGTTCACATCACGA 58.400 50.000 0.00 0.00 0.00 4.35
2392 2432 0.463620 GAGGGAGAGATCTGTGGCAC 59.536 60.000 11.55 11.55 0.00 5.01
2613 2653 2.344203 CGAGGTGACGGAGGAAGCT 61.344 63.158 0.00 0.00 0.00 3.74
2614 2654 2.182030 CGAGGTGACGGAGGAAGC 59.818 66.667 0.00 0.00 0.00 3.86
2615 2655 2.182030 GCGAGGTGACGGAGGAAG 59.818 66.667 0.00 0.00 0.00 3.46
2649 2689 0.169672 CAGCGGGAACTTTGATGCTG 59.830 55.000 0.00 0.00 43.08 4.41
2664 2704 2.182030 GGAAGGACTCCGACAGCG 59.818 66.667 0.00 0.00 33.37 5.18
2805 2845 2.576298 CCGACTCCTAAACGGGACT 58.424 57.895 0.00 0.00 42.48 3.85
2812 2852 2.905415 TCCACCTACCGACTCCTAAA 57.095 50.000 0.00 0.00 0.00 1.85
2821 2861 2.218603 GGCATATGTTTCCACCTACCG 58.781 52.381 4.29 0.00 0.00 4.02
2824 2864 2.174639 CAGGGGCATATGTTTCCACCTA 59.825 50.000 4.29 0.00 0.00 3.08
2825 2865 1.063717 CAGGGGCATATGTTTCCACCT 60.064 52.381 4.29 0.02 0.00 4.00
2826 2866 1.402787 CAGGGGCATATGTTTCCACC 58.597 55.000 4.29 0.00 0.00 4.61
2828 2868 0.261402 CCCAGGGGCATATGTTTCCA 59.739 55.000 4.29 0.00 0.00 3.53
2829 2869 0.261696 ACCCAGGGGCATATGTTTCC 59.738 55.000 11.37 4.18 39.32 3.13
2830 2870 2.159179 AACCCAGGGGCATATGTTTC 57.841 50.000 11.37 0.00 39.32 2.78
2831 2871 2.640284 AAACCCAGGGGCATATGTTT 57.360 45.000 11.37 0.00 39.32 2.83
2833 2873 1.645919 AGAAAACCCAGGGGCATATGT 59.354 47.619 11.37 0.00 39.32 2.29
2834 2874 2.310538 GAGAAAACCCAGGGGCATATG 58.689 52.381 11.37 0.00 39.32 1.78
2835 2875 1.929494 TGAGAAAACCCAGGGGCATAT 59.071 47.619 11.37 0.00 39.32 1.78
2836 2876 1.377690 TGAGAAAACCCAGGGGCATA 58.622 50.000 11.37 0.00 39.32 3.14
2837 2877 0.712380 ATGAGAAAACCCAGGGGCAT 59.288 50.000 11.37 0.57 39.32 4.40
2840 2880 1.549203 CACATGAGAAAACCCAGGGG 58.451 55.000 11.37 6.87 42.03 4.79
2841 2881 1.549203 CCACATGAGAAAACCCAGGG 58.451 55.000 2.85 2.85 0.00 4.45
2842 2882 1.549203 CCCACATGAGAAAACCCAGG 58.451 55.000 0.00 0.00 0.00 4.45
2843 2883 1.075374 TCCCCACATGAGAAAACCCAG 59.925 52.381 0.00 0.00 0.00 4.45
2844 2884 1.075374 CTCCCCACATGAGAAAACCCA 59.925 52.381 0.00 0.00 31.26 4.51
2845 2885 1.616994 CCTCCCCACATGAGAAAACCC 60.617 57.143 0.00 0.00 31.26 4.11
2846 2886 1.354368 TCCTCCCCACATGAGAAAACC 59.646 52.381 0.00 0.00 31.26 3.27
2847 2887 2.879103 TCCTCCCCACATGAGAAAAC 57.121 50.000 0.00 0.00 31.26 2.43
2848 2888 3.893753 TTTCCTCCCCACATGAGAAAA 57.106 42.857 0.00 0.00 31.26 2.29
2849 2889 5.732331 ATATTTCCTCCCCACATGAGAAA 57.268 39.130 0.00 0.00 31.26 2.52
2851 2891 5.488919 GGATATATTTCCTCCCCACATGAGA 59.511 44.000 0.00 0.00 32.68 3.27
2852 2892 5.627735 CGGATATATTTCCTCCCCACATGAG 60.628 48.000 10.10 0.00 33.30 2.90
2853 2893 4.225042 CGGATATATTTCCTCCCCACATGA 59.775 45.833 10.10 0.00 33.30 3.07
2854 2894 4.517285 CGGATATATTTCCTCCCCACATG 58.483 47.826 10.10 0.00 33.30 3.21
2855 2895 3.523564 CCGGATATATTTCCTCCCCACAT 59.476 47.826 10.10 0.00 33.30 3.21
2858 2898 1.913419 GCCGGATATATTTCCTCCCCA 59.087 52.381 5.05 0.00 33.30 4.96
2859 2899 2.170817 GAGCCGGATATATTTCCTCCCC 59.829 54.545 5.05 0.00 33.30 4.81
2860 2900 3.108376 AGAGCCGGATATATTTCCTCCC 58.892 50.000 5.05 0.00 33.30 4.30
2861 2901 3.515901 ACAGAGCCGGATATATTTCCTCC 59.484 47.826 5.05 1.82 33.30 4.30
2862 2902 4.220821 TCACAGAGCCGGATATATTTCCTC 59.779 45.833 5.05 0.00 33.30 3.71
2863 2903 4.160329 TCACAGAGCCGGATATATTTCCT 58.840 43.478 5.05 0.00 33.30 3.36
2864 2904 4.021016 ACTCACAGAGCCGGATATATTTCC 60.021 45.833 5.05 2.25 32.04 3.13
2865 2905 4.926238 CACTCACAGAGCCGGATATATTTC 59.074 45.833 5.05 0.00 32.04 2.17
2866 2906 4.262635 CCACTCACAGAGCCGGATATATTT 60.263 45.833 5.05 0.00 32.04 1.40
2867 2907 3.259374 CCACTCACAGAGCCGGATATATT 59.741 47.826 5.05 0.00 32.04 1.28
2868 2908 2.828520 CCACTCACAGAGCCGGATATAT 59.171 50.000 5.05 0.00 32.04 0.86
2869 2909 2.239400 CCACTCACAGAGCCGGATATA 58.761 52.381 5.05 0.00 32.04 0.86
2870 2910 1.043816 CCACTCACAGAGCCGGATAT 58.956 55.000 5.05 0.00 32.04 1.63
2871 2911 0.324368 ACCACTCACAGAGCCGGATA 60.324 55.000 5.05 0.00 32.13 2.59
2897 2937 4.794439 CTCGTCATCACCGCCGCA 62.794 66.667 0.00 0.00 0.00 5.69
3007 3047 0.743688 CATCTCTGACCTGTCCTCCG 59.256 60.000 0.00 0.00 0.00 4.63
3020 3060 5.284582 AGGAAAACTACCATCTCCATCTCT 58.715 41.667 0.00 0.00 0.00 3.10
3162 3207 0.179119 CATCTCCCGGTTCGTGGTAC 60.179 60.000 0.00 0.00 0.00 3.34
3248 3496 1.611592 CGTACGAAAAAGCCGAGCGT 61.612 55.000 10.44 0.00 38.81 5.07
3257 3505 4.778534 ATCTCACTCCTCGTACGAAAAA 57.221 40.909 20.00 6.58 0.00 1.94
3361 3609 8.847196 GGGGGAAACATTATTAACTCTTATGTC 58.153 37.037 0.00 0.00 0.00 3.06
3436 3684 4.260948 GGAACAGAAAACAAGCTGTCAGAG 60.261 45.833 3.32 0.00 44.06 3.35
3610 3858 6.271566 GTTTACCCCGTGTAATCAACAAAAA 58.728 36.000 0.00 0.00 40.63 1.94
3690 3938 4.537433 GGGCTAGTCTGGGCAGCG 62.537 72.222 11.95 0.00 36.12 5.18
3778 4028 0.617820 TCTGTTAGAGGGAGGGGTGC 60.618 60.000 0.00 0.00 0.00 5.01
3927 4177 3.305813 CCGTGTTCAGAACTAGCTTACCA 60.306 47.826 14.51 0.00 0.00 3.25
4126 4386 3.365265 CAAGGTGGCTTGGGTCGC 61.365 66.667 0.00 0.00 0.00 5.19
4462 4722 1.549203 TCTGCATTTTCCCCTCTTGC 58.451 50.000 0.00 0.00 0.00 4.01
4463 4723 3.615834 GCTTTCTGCATTTTCCCCTCTTG 60.616 47.826 0.00 0.00 42.31 3.02
4502 4860 1.643868 CGTCTCTCTCTCACGCAGCT 61.644 60.000 0.00 0.00 0.00 4.24
4538 4896 8.341173 CAAGAAAGATGCAGCTATAAAGTTAGG 58.659 37.037 4.15 0.00 0.00 2.69
4781 5144 8.340757 CCTAATATCTCTCTAGTCCCAGGTTAT 58.659 40.741 0.00 0.00 0.00 1.89
4820 5183 8.844244 GGATTTGCATAAATACTCAAGACTCAT 58.156 33.333 0.00 0.00 36.66 2.90
4823 5186 8.757982 ATGGATTTGCATAAATACTCAAGACT 57.242 30.769 0.00 0.00 37.87 3.24
4824 5187 9.807649 AAATGGATTTGCATAAATACTCAAGAC 57.192 29.630 0.00 0.00 37.87 3.01
4833 5196 8.316214 ACTGACTGAAAATGGATTTGCATAAAT 58.684 29.630 0.00 0.00 34.92 1.40
4853 5216 6.127026 AAGTTCTGGTAAAGTCTGAACTGACT 60.127 38.462 14.02 8.20 45.80 3.41
5049 5412 4.584325 TCCCACTTTCCATCAACAAAAGAG 59.416 41.667 0.00 0.00 34.76 2.85
5078 5441 9.162764 GCACACAAAAGGAATATAGAGAACTTA 57.837 33.333 0.00 0.00 0.00 2.24
5135 5499 0.717224 GCAATGCAATGGAAACTGCG 59.283 50.000 3.49 0.00 41.63 5.18
5170 5534 4.142447 ACAGAATGAAGAATGCATCTGCAC 60.142 41.667 7.07 0.00 46.84 4.57
5174 5538 8.571461 TTTTCTACAGAATGAAGAATGCATCT 57.429 30.769 0.00 0.00 27.94 2.90
5262 5627 2.057137 TGGCAGAGAACTTGCACTTT 57.943 45.000 0.00 0.00 0.00 2.66
5263 5628 2.283145 ATGGCAGAGAACTTGCACTT 57.717 45.000 0.00 0.00 0.00 3.16
5292 5657 3.619483 TGCGGGTACATAATCAAAACGAG 59.381 43.478 0.00 0.00 0.00 4.18
5296 5661 4.196193 CTCCTGCGGGTACATAATCAAAA 58.804 43.478 12.43 0.00 0.00 2.44
5935 6300 1.332997 GCTCCATAAGACATGCACTGC 59.667 52.381 0.00 0.00 0.00 4.40
6036 6401 6.128849 GCACAACATAAATTCTTGCGTGATTT 60.129 34.615 11.70 0.00 0.00 2.17
6042 6407 4.229096 ACTGCACAACATAAATTCTTGCG 58.771 39.130 0.00 0.00 0.00 4.85
6162 6541 2.500098 CTCCATCTTAACCAAGGGTCGA 59.500 50.000 0.00 0.00 33.12 4.20
6231 6617 3.248024 TCCCGATGTAAGGCAGGATATT 58.752 45.455 0.00 0.00 0.00 1.28
6240 6626 5.424757 TCACTAACATTTCCCGATGTAAGG 58.575 41.667 0.00 0.00 39.25 2.69
6248 6634 6.019152 CGTTACAATTCACTAACATTTCCCG 58.981 40.000 0.00 0.00 0.00 5.14
6304 6690 2.280628 CATCAACTAACTTCTCCCGGC 58.719 52.381 0.00 0.00 0.00 6.13
6311 6697 9.730420 AACACAAACATTACATCAACTAACTTC 57.270 29.630 0.00 0.00 0.00 3.01
6336 6771 4.909696 TGTCGCCAATTCTTTCTTTCAA 57.090 36.364 0.00 0.00 0.00 2.69
6384 6819 8.853077 ATGCAGCTTATTATGTTATGAGCTTA 57.147 30.769 0.00 0.00 42.74 3.09
6489 6924 0.322322 CCCAACTTGCCATGCAACAT 59.678 50.000 0.00 0.00 43.99 2.71
6719 7590 5.070770 TGTTTGGTGGTATGATGAAATGC 57.929 39.130 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.