Multiple sequence alignment - TraesCS3B01G248500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G248500 chr3B 100.000 9474 0 0 1 9474 395918394 395908921 0.000000e+00 17496.0
1 TraesCS3B01G248500 chr3B 79.055 1461 258 35 5930 7356 492205934 492204488 0.000000e+00 959.0
2 TraesCS3B01G248500 chr3B 76.690 725 144 19 5930 6650 395854931 395854228 6.940000e-101 379.0
3 TraesCS3B01G248500 chr3B 94.017 234 6 2 9248 9474 580221475 580221707 1.960000e-91 348.0
4 TraesCS3B01G248500 chr3B 90.265 226 13 5 9249 9474 60410546 60410330 4.330000e-73 287.0
5 TraesCS3B01G248500 chr3B 89.238 223 24 0 9252 9474 179372955 179372733 7.240000e-71 279.0
6 TraesCS3B01G248500 chr3B 86.822 129 17 0 1327 1455 492215530 492215402 2.760000e-30 145.0
7 TraesCS3B01G248500 chr3B 100.000 49 0 0 7673 7721 395910683 395910635 3.640000e-14 91.6
8 TraesCS3B01G248500 chr3B 100.000 49 0 0 7712 7760 395910722 395910674 3.640000e-14 91.6
9 TraesCS3B01G248500 chr3B 85.714 91 8 5 1106 1193 513814950 513814862 3.640000e-14 91.6
10 TraesCS3B01G248500 chr3B 72.321 336 66 22 1099 1419 766612448 766612771 7.890000e-11 80.5
11 TraesCS3B01G248500 chr3B 87.273 55 3 2 5138 5190 128666328 128666380 1.030000e-04 60.2
12 TraesCS3B01G248500 chr3A 97.024 5444 123 15 2284 7721 399890735 399885325 0.000000e+00 9119.0
13 TraesCS3B01G248500 chr3A 93.568 1648 52 17 3 1610 399896469 399894836 0.000000e+00 2407.0
14 TraesCS3B01G248500 chr3A 96.936 1273 20 7 7715 8968 399885370 399884098 0.000000e+00 2117.0
15 TraesCS3B01G248500 chr3A 78.641 1737 289 62 5930 7622 501931423 501929725 0.000000e+00 1077.0
16 TraesCS3B01G248500 chr3A 76.966 725 142 19 5930 6650 399576205 399575502 3.210000e-104 390.0
17 TraesCS3B01G248500 chr3A 95.429 175 7 1 8966 9139 399883775 399883601 2.610000e-70 278.0
18 TraesCS3B01G248500 chr3A 90.741 216 7 3 1644 1859 399894836 399894634 9.370000e-70 276.0
19 TraesCS3B01G248500 chr3A 83.260 227 34 4 9250 9474 747521105 747521329 1.250000e-48 206.0
20 TraesCS3B01G248500 chr3A 80.738 244 11 12 1933 2147 399891113 399890877 3.540000e-34 158.0
21 TraesCS3B01G248500 chr3A 100.000 44 0 0 1850 1893 399891155 399891112 2.190000e-11 82.4
22 TraesCS3B01G248500 chr3A 91.228 57 5 0 1099 1155 711135997 711136053 2.840000e-10 78.7
23 TraesCS3B01G248500 chr3A 87.273 55 3 2 5138 5190 97472440 97472492 1.030000e-04 60.2
24 TraesCS3B01G248500 chr3D 97.426 5284 87 13 2451 7721 323258179 323263426 0.000000e+00 8959.0
25 TraesCS3B01G248500 chr3D 91.505 2366 88 40 114 2399 323255851 323258183 0.000000e+00 3151.0
26 TraesCS3B01G248500 chr3D 96.850 1270 25 8 7712 8973 323263378 323264640 0.000000e+00 2109.0
27 TraesCS3B01G248500 chr3D 77.989 1740 302 58 5930 7622 377885628 377883923 0.000000e+00 1016.0
28 TraesCS3B01G248500 chr3D 77.103 725 141 19 5930 6650 323331599 323332302 6.890000e-106 396.0
29 TraesCS3B01G248500 chr3D 93.583 187 5 1 8693 8879 323311578 323311757 1.210000e-68 272.0
30 TraesCS3B01G248500 chr3D 85.526 228 29 3 9250 9474 612776632 612776406 1.590000e-57 235.0
31 TraesCS3B01G248500 chr3D 92.517 147 10 1 8966 9111 323312100 323312246 9.640000e-50 209.0
32 TraesCS3B01G248500 chr3D 93.750 128 5 2 4 130 323255709 323255834 1.260000e-43 189.0
33 TraesCS3B01G248500 chr3D 95.575 113 5 0 9136 9248 164064414 164064302 2.100000e-41 182.0
34 TraesCS3B01G248500 chr3D 86.822 129 17 0 1327 1455 377894288 377894160 2.760000e-30 145.0
35 TraesCS3B01G248500 chr3D 72.131 366 74 24 1068 1419 575673783 575674134 1.700000e-12 86.1
36 TraesCS3B01G248500 chr3D 94.737 38 0 2 9103 9140 323312652 323312687 3.700000e-04 58.4
37 TraesCS3B01G248500 chr2A 92.565 4129 259 25 3586 7676 719275986 719280104 0.000000e+00 5880.0
38 TraesCS3B01G248500 chr2A 88.054 1264 111 16 7757 9005 719280144 719281382 0.000000e+00 1461.0
39 TraesCS3B01G248500 chr2A 86.305 1088 77 36 2501 3568 719274959 719275994 0.000000e+00 1118.0
40 TraesCS3B01G248500 chr2A 84.455 817 73 27 669 1455 719273212 719274004 0.000000e+00 756.0
41 TraesCS3B01G248500 chr2A 86.207 58 8 0 9136 9193 328282751 328282694 7.940000e-06 63.9
42 TraesCS3B01G248500 chr4B 89.427 227 24 0 9248 9474 465733998 465734224 4.330000e-73 287.0
43 TraesCS3B01G248500 chr5B 87.558 217 24 3 9249 9464 662602587 662602373 2.040000e-61 248.0
44 TraesCS3B01G248500 chr5B 87.437 199 25 0 9244 9442 458617023 458617221 7.400000e-56 230.0
45 TraesCS3B01G248500 chr5D 85.321 218 28 3 9248 9464 526842734 526842520 1.240000e-53 222.0
46 TraesCS3B01G248500 chr5A 85.000 100 15 0 9138 9237 490297262 490297163 1.680000e-17 102.0
47 TraesCS3B01G248500 chr7D 88.889 54 6 0 1106 1159 474333598 474333651 6.140000e-07 67.6
48 TraesCS3B01G248500 chr7B 88.889 54 6 0 1106 1159 498513512 498513565 6.140000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G248500 chr3B 395908921 395918394 9473 True 17496.000000 17496 100.000000 1 9474 1 chr3B.!!$R4 9473
1 TraesCS3B01G248500 chr3B 492204488 492205934 1446 True 959.000000 959 79.055000 5930 7356 1 chr3B.!!$R5 1426
2 TraesCS3B01G248500 chr3B 395854228 395854931 703 True 379.000000 379 76.690000 5930 6650 1 chr3B.!!$R3 720
3 TraesCS3B01G248500 chr3A 399883601 399896469 12868 True 2062.485714 9119 93.490857 3 9139 7 chr3A.!!$R3 9136
4 TraesCS3B01G248500 chr3A 501929725 501931423 1698 True 1077.000000 1077 78.641000 5930 7622 1 chr3A.!!$R2 1692
5 TraesCS3B01G248500 chr3A 399575502 399576205 703 True 390.000000 390 76.966000 5930 6650 1 chr3A.!!$R1 720
6 TraesCS3B01G248500 chr3D 323255709 323264640 8931 False 3602.000000 8959 94.882750 4 8973 4 chr3D.!!$F3 8969
7 TraesCS3B01G248500 chr3D 377883923 377885628 1705 True 1016.000000 1016 77.989000 5930 7622 1 chr3D.!!$R2 1692
8 TraesCS3B01G248500 chr3D 323331599 323332302 703 False 396.000000 396 77.103000 5930 6650 1 chr3D.!!$F1 720
9 TraesCS3B01G248500 chr2A 719273212 719281382 8170 False 2303.750000 5880 87.844750 669 9005 4 chr2A.!!$F1 8336

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 726 0.456312 CTAGCAGTTCGACGACCACC 60.456 60.000 0.00 0.0 0.00 4.61 F
1470 1585 0.313672 TAAAGCCGCCTGCACAAAAG 59.686 50.000 0.00 0.0 44.83 2.27 F
1918 5690 0.449786 CACAAACGACCAAGCACACA 59.550 50.000 0.00 0.0 0.00 3.72 F
1919 5691 0.450184 ACAAACGACCAAGCACACAC 59.550 50.000 0.00 0.0 0.00 3.82 F
2534 6385 1.068741 ACCGTGCCCTTTCTCGATATC 59.931 52.381 0.00 0.0 0.00 1.63 F
2817 6668 1.153628 GACCGCCGCTTACATCAGT 60.154 57.895 0.00 0.0 0.00 3.41 F
3312 7188 2.156917 CTGAAGCACTGCAAGGATGAA 58.843 47.619 3.30 0.0 39.30 2.57 F
4499 8375 1.518903 GGGCGCTGTTCTTTGCTCTT 61.519 55.000 7.64 0.0 0.00 2.85 F
4910 8792 0.317160 TGTCATCTTCGCTGTTCCGT 59.683 50.000 0.00 0.0 0.00 4.69 F
5452 9336 2.417924 CCTGCTCTACACCTTAGCACTG 60.418 54.545 0.00 0.0 41.15 3.66 F
7708 11662 1.529865 GTCACAGCCGTGGTTAAAGTC 59.470 52.381 0.00 0.0 43.79 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2272 6112 0.321830 CGGCGGAGGGGTTTTCTTAA 60.322 55.000 0.00 0.0 0.00 1.85 R
2817 6668 0.101219 CGATGTGGAGATCGTGCTGA 59.899 55.000 0.00 0.0 40.32 4.26 R
3626 7502 0.311790 ACAAGCATTTCACCTGTGCG 59.688 50.000 0.00 0.0 43.37 5.34 R
3775 7651 0.403271 ATGTTTCAGGAGCTGGCTGT 59.597 50.000 0.00 0.0 31.51 4.40 R
4180 8056 4.025858 GCCAGAGCAGCAGGGTGA 62.026 66.667 2.13 0.0 39.53 4.02 R
4361 8237 4.397417 GCAAAGGTTCAGATTGATGCTACT 59.603 41.667 0.00 0.0 28.06 2.57 R
4910 8792 5.047802 GTCTCTTCCAATTCCAGCAATGAAA 60.048 40.000 0.00 0.0 0.00 2.69 R
5850 9734 4.713824 ATTGTGCTCTCATGTTCATTGG 57.286 40.909 0.00 0.0 0.00 3.16 R
7243 11159 5.123936 GTGTAGGATGGGTTTCTCCAATAC 58.876 45.833 0.00 0.0 40.62 1.89 R
7714 11668 0.036952 CTGTGACTCCGATTGCCAGT 60.037 55.000 0.00 0.0 0.00 4.00 R
9451 13765 0.179234 GGTTGTGGTTTTGGGTTGGG 59.821 55.000 0.00 0.0 0.00 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 123 6.487828 AGACCAATGGATGAAGAGAAATTGA 58.512 36.000 6.16 0.00 0.00 2.57
159 193 5.523369 AGAATTCGCCTGAAAAGACTTTTG 58.477 37.500 17.76 5.16 37.71 2.44
188 222 3.896888 TGATTGGGTGGCCATGAATAATC 59.103 43.478 9.72 15.04 0.00 1.75
198 232 5.045651 TGGCCATGAATAATCTATCGGTCAT 60.046 40.000 0.00 0.00 0.00 3.06
217 251 1.480212 TTGCTCATGTCGACACCCCT 61.480 55.000 22.71 1.02 0.00 4.79
225 259 1.269726 TGTCGACACCCCTAACGAAAC 60.270 52.381 15.76 0.00 36.57 2.78
233 267 0.730840 CCCTAACGAAACGAATGGGC 59.269 55.000 0.00 0.00 0.00 5.36
245 279 1.311859 GAATGGGCGATGCAATCTCA 58.688 50.000 0.00 0.00 42.58 3.27
247 281 0.471191 ATGGGCGATGCAATCTCAGA 59.529 50.000 0.00 0.00 42.58 3.27
361 395 6.615726 ACACCCATCCAAAGTAGACACTATAT 59.384 38.462 0.00 0.00 33.48 0.86
362 396 7.787904 ACACCCATCCAAAGTAGACACTATATA 59.212 37.037 0.00 0.00 33.48 0.86
465 501 7.696992 TCGTAATATCATACTATCACTGGCA 57.303 36.000 0.00 0.00 0.00 4.92
466 502 8.117813 TCGTAATATCATACTATCACTGGCAA 57.882 34.615 0.00 0.00 0.00 4.52
467 503 8.581578 TCGTAATATCATACTATCACTGGCAAA 58.418 33.333 0.00 0.00 0.00 3.68
508 554 2.030363 AGAGCAGCCTCGAATCGAATAG 60.030 50.000 6.84 0.00 43.05 1.73
511 557 2.473235 GCAGCCTCGAATCGAATAGTTC 59.527 50.000 6.84 0.00 34.74 3.01
514 560 2.662700 CCTCGAATCGAATAGTTCCGG 58.337 52.381 6.84 0.00 34.74 5.14
599 645 4.101448 CCAGGAAGCTCCCCCGTG 62.101 72.222 0.00 0.00 37.19 4.94
665 724 1.460504 ATCTAGCAGTTCGACGACCA 58.539 50.000 0.00 0.00 0.00 4.02
666 725 0.520404 TCTAGCAGTTCGACGACCAC 59.480 55.000 0.00 0.00 0.00 4.16
667 726 0.456312 CTAGCAGTTCGACGACCACC 60.456 60.000 0.00 0.00 0.00 4.61
803 862 1.599576 GTCTTCCTCCTCACCAGCC 59.400 63.158 0.00 0.00 0.00 4.85
841 905 6.728411 TCTCTTCTCCTGGGCGTATATATAA 58.272 40.000 0.00 0.00 0.00 0.98
865 937 1.219393 CCTTCGTCTGCTCCCTTCC 59.781 63.158 0.00 0.00 0.00 3.46
969 1046 2.098934 CAGAGAGTGATCAACGGAGGAG 59.901 54.545 0.00 0.00 0.00 3.69
989 1066 5.600898 AGGAGGAAGAGGAAGATAAGTAAGC 59.399 44.000 0.00 0.00 0.00 3.09
1443 1546 0.537653 TCAACTCCGTCACCAACACA 59.462 50.000 0.00 0.00 0.00 3.72
1470 1585 0.313672 TAAAGCCGCCTGCACAAAAG 59.686 50.000 0.00 0.00 44.83 2.27
1481 1596 2.689983 CTGCACAAAAGGTTCAGTTCCT 59.310 45.455 0.00 0.00 36.22 3.36
1486 1601 1.884235 AAAGGTTCAGTTCCTCTGCG 58.116 50.000 0.00 0.00 43.32 5.18
1547 1665 4.082845 TGTCTTTGTTTTTCTCCACACCA 58.917 39.130 0.00 0.00 0.00 4.17
1615 1733 1.211457 CTAATCAGTCCTGGCTTGGCT 59.789 52.381 0.00 0.00 0.00 4.75
1711 1829 2.653702 GAGGCGAGTGACAGTGCT 59.346 61.111 0.00 0.00 0.00 4.40
1842 1960 3.488721 GCTGTATGCTTTTGGCTCATCAG 60.489 47.826 0.00 0.00 42.39 2.90
1918 5690 0.449786 CACAAACGACCAAGCACACA 59.550 50.000 0.00 0.00 0.00 3.72
1919 5691 0.450184 ACAAACGACCAAGCACACAC 59.550 50.000 0.00 0.00 0.00 3.82
2030 5830 5.003804 AGCCGCCACCTAATAATATTCAAG 58.996 41.667 0.00 0.00 0.00 3.02
2053 5853 8.850156 CAAGTCCTAATTCTTTCTCCTTTCAAA 58.150 33.333 0.00 0.00 0.00 2.69
2069 5872 9.152595 CTCCTTTCAAATTGTACTAAGTCCTAC 57.847 37.037 0.00 0.00 0.00 3.18
2170 6004 2.148768 GCGTAAAGTAGCCCAACAAGT 58.851 47.619 0.00 0.00 0.00 3.16
2171 6005 2.159037 GCGTAAAGTAGCCCAACAAGTC 59.841 50.000 0.00 0.00 0.00 3.01
2172 6006 2.740447 CGTAAAGTAGCCCAACAAGTCC 59.260 50.000 0.00 0.00 0.00 3.85
2177 6014 2.174854 AGTAGCCCAACAAGTCCAAACT 59.825 45.455 0.00 0.00 37.32 2.66
2223 6060 5.520632 GCAACAGAGCGATAATACTAGACA 58.479 41.667 0.00 0.00 0.00 3.41
2225 6062 6.495706 CAACAGAGCGATAATACTAGACACA 58.504 40.000 0.00 0.00 0.00 3.72
2226 6063 6.062434 ACAGAGCGATAATACTAGACACAC 57.938 41.667 0.00 0.00 0.00 3.82
2227 6064 5.140872 CAGAGCGATAATACTAGACACACG 58.859 45.833 0.00 0.00 0.00 4.49
2228 6065 4.213694 AGAGCGATAATACTAGACACACGG 59.786 45.833 0.00 0.00 0.00 4.94
2242 6082 2.118683 CACACGGCACTCAAAACAATG 58.881 47.619 0.00 0.00 0.00 2.82
2264 6104 4.759205 GCCGATGGCCACCCCTTT 62.759 66.667 8.16 0.00 44.06 3.11
2533 6384 1.120530 ACCGTGCCCTTTCTCGATAT 58.879 50.000 0.00 0.00 0.00 1.63
2534 6385 1.068741 ACCGTGCCCTTTCTCGATATC 59.931 52.381 0.00 0.00 0.00 1.63
2535 6386 1.341531 CCGTGCCCTTTCTCGATATCT 59.658 52.381 0.34 0.00 0.00 1.98
2536 6387 2.557056 CCGTGCCCTTTCTCGATATCTA 59.443 50.000 0.34 0.00 0.00 1.98
2817 6668 1.153628 GACCGCCGCTTACATCAGT 60.154 57.895 0.00 0.00 0.00 3.41
2951 6823 7.118971 GGAATGTGCTTATCTTATCTGTCATCC 59.881 40.741 0.00 0.00 0.00 3.51
3083 6955 4.697514 ACATGAAGGTGAGGATGTTATCG 58.302 43.478 0.00 0.00 0.00 2.92
3135 7007 6.702329 AGCTGTTTTATGTGACTAGCTTAGT 58.298 36.000 0.00 0.00 42.86 2.24
3160 7032 7.647907 ATTGAAGACAATCATTTGAACAAGC 57.352 32.000 0.00 0.00 42.20 4.01
3262 7138 8.197439 TCCAGTATTGTGACAGAATACATACTG 58.803 37.037 27.77 21.07 38.32 2.74
3312 7188 2.156917 CTGAAGCACTGCAAGGATGAA 58.843 47.619 3.30 0.00 39.30 2.57
3359 7235 3.253677 AGAACGACGACTTCTCATGTCTT 59.746 43.478 0.00 0.00 32.70 3.01
3370 7246 5.698545 ACTTCTCATGTCTTGTTACTCTTGC 59.301 40.000 0.00 0.00 0.00 4.01
3560 7436 7.119846 GCACCTTCTTCATCACAGTAAAATAGT 59.880 37.037 0.00 0.00 0.00 2.12
3561 7437 8.660373 CACCTTCTTCATCACAGTAAAATAGTC 58.340 37.037 0.00 0.00 0.00 2.59
3562 7438 8.598041 ACCTTCTTCATCACAGTAAAATAGTCT 58.402 33.333 0.00 0.00 0.00 3.24
3563 7439 9.442047 CCTTCTTCATCACAGTAAAATAGTCTT 57.558 33.333 0.00 0.00 0.00 3.01
3572 7448 8.726988 TCACAGTAAAATAGTCTTATTTGCACC 58.273 33.333 0.00 0.00 38.99 5.01
3573 7449 8.730680 CACAGTAAAATAGTCTTATTTGCACCT 58.269 33.333 0.00 0.00 38.99 4.00
3574 7450 8.730680 ACAGTAAAATAGTCTTATTTGCACCTG 58.269 33.333 0.00 0.00 38.99 4.00
3575 7451 7.698130 CAGTAAAATAGTCTTATTTGCACCTGC 59.302 37.037 0.00 0.00 38.99 4.85
3626 7502 7.426410 TCCTAATCGACTCATGTATCTTCAAC 58.574 38.462 0.00 0.00 0.00 3.18
3775 7651 2.182827 ACTGCTGTCATCTCCTTGCTA 58.817 47.619 0.00 0.00 0.00 3.49
3894 7770 3.415212 TCTTTGAGTTCATGGGCTTCAG 58.585 45.455 0.00 0.00 0.00 3.02
4180 8056 3.266772 TGCCATTTGATAGGACCAGAAGT 59.733 43.478 0.00 0.00 0.00 3.01
4273 8149 6.894682 TAGAGAGCTTCTACTCATGAAGAGA 58.105 40.000 7.56 0.00 42.37 3.10
4383 8259 6.506500 AAGTAGCATCAATCTGAACCTTTG 57.493 37.500 0.00 0.00 0.00 2.77
4499 8375 1.518903 GGGCGCTGTTCTTTGCTCTT 61.519 55.000 7.64 0.00 0.00 2.85
4910 8792 0.317160 TGTCATCTTCGCTGTTCCGT 59.683 50.000 0.00 0.00 0.00 4.69
5239 9121 2.908351 TGGAACCAAGTAAGTACCCTCC 59.092 50.000 0.00 0.00 0.00 4.30
5452 9336 2.417924 CCTGCTCTACACCTTAGCACTG 60.418 54.545 0.00 0.00 41.15 3.66
5663 9547 8.678199 GCAAATTTAACTGGTAAAGCTCTAGAT 58.322 33.333 4.05 0.00 35.16 1.98
5850 9734 5.193679 ACATGCCAGAGGTAAATTTCCTAC 58.806 41.667 8.58 0.00 35.20 3.18
6195 10080 5.754890 TGATATTCATTCTCCACATGTGACG 59.245 40.000 27.46 16.44 0.00 4.35
7071 10981 7.229306 CCACAAGCCATTCATATACATTGTAGT 59.771 37.037 2.53 0.00 0.00 2.73
7243 11159 4.697300 CTTGTGGAAGCAAAAATTGTCG 57.303 40.909 0.00 0.00 0.00 4.35
7651 11595 5.189145 ACTCTCGGTTTACCTATTTCATGGT 59.811 40.000 0.00 0.00 40.12 3.55
7653 11597 6.812998 TCTCGGTTTACCTATTTCATGGTAG 58.187 40.000 0.00 0.00 39.61 3.18
7671 11615 8.933653 TCATGGTAGATGTATGAATGACCTTTA 58.066 33.333 0.00 0.00 0.00 1.85
7686 11640 3.081804 ACCTTTAAGAACTGGCAATCGG 58.918 45.455 0.00 0.00 0.00 4.18
7708 11662 1.529865 GTCACAGCCGTGGTTAAAGTC 59.470 52.381 0.00 0.00 43.79 3.01
7712 11666 1.531149 CAGCCGTGGTTAAAGTCACAG 59.469 52.381 0.00 0.00 33.83 3.66
7713 11667 1.414919 AGCCGTGGTTAAAGTCACAGA 59.585 47.619 0.00 0.00 33.83 3.41
7714 11668 2.158871 AGCCGTGGTTAAAGTCACAGAA 60.159 45.455 0.00 0.00 33.83 3.02
7715 11669 2.032290 GCCGTGGTTAAAGTCACAGAAC 60.032 50.000 0.00 0.00 33.83 3.01
7716 11670 3.463944 CCGTGGTTAAAGTCACAGAACT 58.536 45.455 0.00 0.00 33.83 3.01
7717 11671 3.247648 CCGTGGTTAAAGTCACAGAACTG 59.752 47.826 0.00 0.00 33.83 3.16
7718 11672 3.247648 CGTGGTTAAAGTCACAGAACTGG 59.752 47.826 6.76 0.00 33.83 4.00
7719 11673 3.003378 GTGGTTAAAGTCACAGAACTGGC 59.997 47.826 6.76 0.00 34.32 4.85
7720 11674 3.211045 GGTTAAAGTCACAGAACTGGCA 58.789 45.455 6.76 0.00 34.19 4.92
7721 11675 3.630312 GGTTAAAGTCACAGAACTGGCAA 59.370 43.478 6.76 0.00 34.19 4.52
7722 11676 4.278419 GGTTAAAGTCACAGAACTGGCAAT 59.722 41.667 6.76 0.00 34.19 3.56
7723 11677 5.452777 GTTAAAGTCACAGAACTGGCAATC 58.547 41.667 6.76 0.00 34.19 2.67
7724 11678 1.800805 AGTCACAGAACTGGCAATCG 58.199 50.000 6.76 0.00 34.19 3.34
7725 11679 0.798776 GTCACAGAACTGGCAATCGG 59.201 55.000 6.76 0.00 34.19 4.18
7726 11680 0.684535 TCACAGAACTGGCAATCGGA 59.315 50.000 6.76 0.00 34.19 4.55
7727 11681 1.081892 CACAGAACTGGCAATCGGAG 58.918 55.000 6.76 0.00 34.19 4.63
7728 11682 0.687354 ACAGAACTGGCAATCGGAGT 59.313 50.000 6.76 0.40 34.19 3.85
7729 11683 1.338200 ACAGAACTGGCAATCGGAGTC 60.338 52.381 6.76 0.00 34.19 3.36
7730 11684 0.976641 AGAACTGGCAATCGGAGTCA 59.023 50.000 0.00 0.00 0.00 3.41
7731 11685 1.079503 GAACTGGCAATCGGAGTCAC 58.920 55.000 0.00 0.00 0.00 3.67
7732 11686 0.396435 AACTGGCAATCGGAGTCACA 59.604 50.000 0.00 0.00 0.00 3.58
7733 11687 0.036952 ACTGGCAATCGGAGTCACAG 60.037 55.000 4.86 4.86 0.00 3.66
7734 11688 1.364626 CTGGCAATCGGAGTCACAGC 61.365 60.000 0.00 0.00 0.00 4.40
7735 11689 2.109126 GGCAATCGGAGTCACAGCC 61.109 63.158 0.00 0.00 0.00 4.85
7740 11694 3.991051 CGGAGTCACAGCCGTGGT 61.991 66.667 0.00 0.00 43.79 4.16
7741 11695 2.426023 GGAGTCACAGCCGTGGTT 59.574 61.111 0.00 0.00 43.79 3.67
7742 11696 1.669440 GGAGTCACAGCCGTGGTTA 59.331 57.895 0.00 0.00 43.79 2.85
7743 11697 0.034337 GGAGTCACAGCCGTGGTTAA 59.966 55.000 0.00 0.00 43.79 2.01
7744 11698 1.541670 GGAGTCACAGCCGTGGTTAAA 60.542 52.381 0.00 0.00 43.79 1.52
7745 11699 1.798813 GAGTCACAGCCGTGGTTAAAG 59.201 52.381 0.00 0.00 43.79 1.85
7746 11700 1.140252 AGTCACAGCCGTGGTTAAAGT 59.860 47.619 0.00 0.00 43.79 2.66
7747 11701 1.529865 GTCACAGCCGTGGTTAAAGTC 59.470 52.381 0.00 0.00 43.79 3.01
7748 11702 1.139256 TCACAGCCGTGGTTAAAGTCA 59.861 47.619 0.00 0.00 43.79 3.41
7749 11703 1.263217 CACAGCCGTGGTTAAAGTCAC 59.737 52.381 0.00 0.00 39.64 3.67
7750 11704 1.134340 ACAGCCGTGGTTAAAGTCACA 60.134 47.619 0.00 0.00 33.83 3.58
8104 12058 0.909623 ATCCCCCGACCTGTAAGTTG 59.090 55.000 0.00 0.00 0.00 3.16
8174 12128 4.318332 CAGTGCTCCTTGTCTTTCACATA 58.682 43.478 0.00 0.00 33.90 2.29
8551 12513 2.019249 CAGTGCGGATGGATTGAACAT 58.981 47.619 0.00 0.00 0.00 2.71
8660 12634 8.041919 ACTTGTAGGAAAGGCTAATTAGTCTTC 58.958 37.037 27.90 20.73 46.69 2.87
8709 12687 6.528774 GCTCTAGCTGAGTAACTGTTACTTTC 59.471 42.308 28.31 19.30 44.41 2.62
9015 13328 1.407979 CATCAAATCCAGCTTCTGCCC 59.592 52.381 0.00 0.00 40.80 5.36
9021 13334 4.711949 CAGCTTCTGCCCGGCTGT 62.712 66.667 11.61 0.00 45.59 4.40
9026 13339 1.856265 CTTCTGCCCGGCTGTGTTTC 61.856 60.000 11.61 0.00 0.00 2.78
9144 13458 9.762381 TCTTTAATTATTGTAGTTCAATGGGGT 57.238 29.630 5.32 0.00 45.14 4.95
9145 13459 9.801873 CTTTAATTATTGTAGTTCAATGGGGTG 57.198 33.333 5.32 0.00 45.14 4.61
9146 13460 5.852282 ATTATTGTAGTTCAATGGGGTGC 57.148 39.130 5.32 0.00 45.14 5.01
9147 13461 1.917872 TTGTAGTTCAATGGGGTGCC 58.082 50.000 0.00 0.00 0.00 5.01
9148 13462 0.774276 TGTAGTTCAATGGGGTGCCA 59.226 50.000 0.00 0.00 0.00 4.92
9149 13463 1.271871 TGTAGTTCAATGGGGTGCCAG 60.272 52.381 0.00 0.00 0.00 4.85
9150 13464 0.331278 TAGTTCAATGGGGTGCCAGG 59.669 55.000 0.00 0.00 0.00 4.45
9151 13465 1.984026 GTTCAATGGGGTGCCAGGG 60.984 63.158 0.00 0.00 0.00 4.45
9152 13466 2.166346 TTCAATGGGGTGCCAGGGA 61.166 57.895 0.00 0.00 0.00 4.20
9153 13467 1.734420 TTCAATGGGGTGCCAGGGAA 61.734 55.000 0.00 0.00 0.00 3.97
9154 13468 1.229145 CAATGGGGTGCCAGGGAAA 60.229 57.895 0.00 0.00 0.00 3.13
9155 13469 1.229177 AATGGGGTGCCAGGGAAAC 60.229 57.895 0.00 0.00 0.00 2.78
9156 13470 2.029892 AATGGGGTGCCAGGGAAACA 62.030 55.000 0.00 0.00 0.00 2.83
9157 13471 2.029892 ATGGGGTGCCAGGGAAACAA 62.030 55.000 0.00 0.00 0.00 2.83
9158 13472 1.229177 GGGGTGCCAGGGAAACAAT 60.229 57.895 0.00 0.00 0.00 2.71
9159 13473 0.835971 GGGGTGCCAGGGAAACAATT 60.836 55.000 0.00 0.00 0.00 2.32
9160 13474 0.608130 GGGTGCCAGGGAAACAATTC 59.392 55.000 0.00 0.00 34.66 2.17
9173 13487 5.912360 GAAACAATTCCTCTGCAAAAAGG 57.088 39.130 3.56 3.56 0.00 3.11
9174 13488 4.341366 AACAATTCCTCTGCAAAAAGGG 57.659 40.909 9.03 0.00 33.21 3.95
9175 13489 3.575805 ACAATTCCTCTGCAAAAAGGGA 58.424 40.909 9.03 1.87 33.21 4.20
9176 13490 3.575687 ACAATTCCTCTGCAAAAAGGGAG 59.424 43.478 9.03 1.19 33.21 4.30
9177 13491 3.532641 ATTCCTCTGCAAAAAGGGAGT 57.467 42.857 9.03 0.00 33.21 3.85
9178 13492 2.568623 TCCTCTGCAAAAAGGGAGTC 57.431 50.000 9.03 0.00 33.21 3.36
9179 13493 1.774254 TCCTCTGCAAAAAGGGAGTCA 59.226 47.619 9.03 0.00 33.21 3.41
9180 13494 2.157738 CCTCTGCAAAAAGGGAGTCAG 58.842 52.381 2.21 0.00 0.00 3.51
9181 13495 2.224621 CCTCTGCAAAAAGGGAGTCAGA 60.225 50.000 2.21 0.00 0.00 3.27
9182 13496 2.810852 CTCTGCAAAAAGGGAGTCAGAC 59.189 50.000 0.00 0.00 0.00 3.51
9183 13497 2.172505 TCTGCAAAAAGGGAGTCAGACA 59.827 45.455 2.66 0.00 0.00 3.41
9184 13498 2.951642 CTGCAAAAAGGGAGTCAGACAA 59.048 45.455 2.66 0.00 0.00 3.18
9185 13499 2.951642 TGCAAAAAGGGAGTCAGACAAG 59.048 45.455 2.66 0.00 0.00 3.16
9186 13500 2.294512 GCAAAAAGGGAGTCAGACAAGG 59.705 50.000 2.66 0.00 0.00 3.61
9187 13501 3.555966 CAAAAAGGGAGTCAGACAAGGT 58.444 45.455 2.66 0.00 0.00 3.50
9188 13502 2.938956 AAAGGGAGTCAGACAAGGTG 57.061 50.000 2.66 0.00 0.00 4.00
9189 13503 2.103153 AAGGGAGTCAGACAAGGTGA 57.897 50.000 2.66 0.00 0.00 4.02
9190 13504 2.334006 AGGGAGTCAGACAAGGTGAT 57.666 50.000 2.66 0.00 0.00 3.06
9191 13505 2.183679 AGGGAGTCAGACAAGGTGATC 58.816 52.381 2.66 0.00 0.00 2.92
9192 13506 1.208293 GGGAGTCAGACAAGGTGATCC 59.792 57.143 2.66 0.00 0.00 3.36
9193 13507 1.902508 GGAGTCAGACAAGGTGATCCA 59.097 52.381 2.66 0.00 35.89 3.41
9194 13508 2.503356 GGAGTCAGACAAGGTGATCCAT 59.497 50.000 2.66 0.00 35.89 3.41
9195 13509 3.054802 GGAGTCAGACAAGGTGATCCATT 60.055 47.826 2.66 0.00 35.89 3.16
9196 13510 4.162320 GGAGTCAGACAAGGTGATCCATTA 59.838 45.833 2.66 0.00 35.89 1.90
9197 13511 5.163258 GGAGTCAGACAAGGTGATCCATTAT 60.163 44.000 2.66 0.00 35.89 1.28
9198 13512 5.923204 AGTCAGACAAGGTGATCCATTATC 58.077 41.667 2.66 0.00 35.89 1.75
9199 13513 5.059833 GTCAGACAAGGTGATCCATTATCC 58.940 45.833 0.00 0.00 33.22 2.59
9200 13514 4.103153 TCAGACAAGGTGATCCATTATCCC 59.897 45.833 0.00 0.00 33.22 3.85
9201 13515 3.395941 AGACAAGGTGATCCATTATCCCC 59.604 47.826 0.00 0.00 32.54 4.81
9202 13516 3.130450 ACAAGGTGATCCATTATCCCCA 58.870 45.455 0.00 0.00 34.72 4.96
9203 13517 3.728990 ACAAGGTGATCCATTATCCCCAT 59.271 43.478 0.00 0.00 34.72 4.00
9204 13518 4.170647 ACAAGGTGATCCATTATCCCCATT 59.829 41.667 0.00 0.00 34.72 3.16
9205 13519 4.393239 AGGTGATCCATTATCCCCATTG 57.607 45.455 0.00 0.00 34.72 2.82
9206 13520 3.989558 AGGTGATCCATTATCCCCATTGA 59.010 43.478 0.00 0.00 34.72 2.57
9207 13521 4.609363 AGGTGATCCATTATCCCCATTGAT 59.391 41.667 0.00 0.00 34.72 2.57
9208 13522 4.952335 GGTGATCCATTATCCCCATTGATC 59.048 45.833 0.00 0.00 32.64 2.92
9209 13523 5.281401 GGTGATCCATTATCCCCATTGATCT 60.281 44.000 0.00 0.00 32.64 2.75
9210 13524 6.251471 GTGATCCATTATCCCCATTGATCTT 58.749 40.000 0.00 0.00 33.22 2.40
9211 13525 6.723052 GTGATCCATTATCCCCATTGATCTTT 59.277 38.462 0.00 0.00 33.22 2.52
9212 13526 6.722590 TGATCCATTATCCCCATTGATCTTTG 59.277 38.462 0.00 0.00 33.22 2.77
9213 13527 6.029492 TCCATTATCCCCATTGATCTTTGT 57.971 37.500 0.00 0.00 0.00 2.83
9214 13528 5.834742 TCCATTATCCCCATTGATCTTTGTG 59.165 40.000 0.00 0.00 0.00 3.33
9215 13529 5.834742 CCATTATCCCCATTGATCTTTGTGA 59.165 40.000 0.00 0.00 0.00 3.58
9216 13530 6.495872 CCATTATCCCCATTGATCTTTGTGAT 59.504 38.462 0.00 0.00 38.27 3.06
9217 13531 7.015877 CCATTATCCCCATTGATCTTTGTGATT 59.984 37.037 0.00 0.00 35.14 2.57
9218 13532 5.864418 ATCCCCATTGATCTTTGTGATTG 57.136 39.130 0.00 0.00 35.14 2.67
9219 13533 3.448301 TCCCCATTGATCTTTGTGATTGC 59.552 43.478 0.00 0.00 35.14 3.56
9220 13534 3.196039 CCCCATTGATCTTTGTGATTGCA 59.804 43.478 0.00 0.00 35.14 4.08
9221 13535 4.430007 CCCATTGATCTTTGTGATTGCAG 58.570 43.478 0.00 0.00 35.14 4.41
9222 13536 3.863424 CCATTGATCTTTGTGATTGCAGC 59.137 43.478 0.00 0.00 35.14 5.25
9223 13537 4.490743 CATTGATCTTTGTGATTGCAGCA 58.509 39.130 0.00 0.00 35.14 4.41
9224 13538 3.842732 TGATCTTTGTGATTGCAGCAG 57.157 42.857 0.00 0.00 35.14 4.24
9225 13539 3.414269 TGATCTTTGTGATTGCAGCAGA 58.586 40.909 0.00 0.00 35.14 4.26
9226 13540 4.014406 TGATCTTTGTGATTGCAGCAGAT 58.986 39.130 0.00 0.00 35.14 2.90
9227 13541 3.842732 TCTTTGTGATTGCAGCAGATG 57.157 42.857 0.00 0.00 0.00 2.90
9228 13542 3.151554 TCTTTGTGATTGCAGCAGATGT 58.848 40.909 0.00 0.00 0.00 3.06
9229 13543 4.325972 TCTTTGTGATTGCAGCAGATGTA 58.674 39.130 0.00 0.00 0.00 2.29
9230 13544 4.154737 TCTTTGTGATTGCAGCAGATGTAC 59.845 41.667 0.00 0.00 0.00 2.90
9231 13545 3.339253 TGTGATTGCAGCAGATGTACT 57.661 42.857 0.00 0.00 0.00 2.73
9232 13546 3.264947 TGTGATTGCAGCAGATGTACTC 58.735 45.455 0.00 0.00 0.00 2.59
9233 13547 2.611292 GTGATTGCAGCAGATGTACTCC 59.389 50.000 0.00 0.00 0.00 3.85
9234 13548 2.236893 TGATTGCAGCAGATGTACTCCA 59.763 45.455 0.00 0.00 0.00 3.86
9235 13549 2.857186 TTGCAGCAGATGTACTCCAA 57.143 45.000 0.00 0.00 0.00 3.53
9236 13550 3.354948 TTGCAGCAGATGTACTCCAAT 57.645 42.857 0.00 0.00 0.00 3.16
9237 13551 2.910199 TGCAGCAGATGTACTCCAATC 58.090 47.619 0.00 0.00 0.00 2.67
9238 13552 2.216898 GCAGCAGATGTACTCCAATCC 58.783 52.381 0.00 0.00 0.00 3.01
9239 13553 2.420547 GCAGCAGATGTACTCCAATCCA 60.421 50.000 0.00 0.00 0.00 3.41
9240 13554 3.746751 GCAGCAGATGTACTCCAATCCAT 60.747 47.826 0.00 0.00 0.00 3.41
9241 13555 3.813724 CAGCAGATGTACTCCAATCCATG 59.186 47.826 0.00 0.00 0.00 3.66
9242 13556 2.551459 GCAGATGTACTCCAATCCATGC 59.449 50.000 0.00 0.00 0.00 4.06
9243 13557 3.746751 GCAGATGTACTCCAATCCATGCT 60.747 47.826 0.00 0.00 0.00 3.79
9244 13558 4.063689 CAGATGTACTCCAATCCATGCTC 58.936 47.826 0.00 0.00 0.00 4.26
9245 13559 3.713248 AGATGTACTCCAATCCATGCTCA 59.287 43.478 0.00 0.00 0.00 4.26
9246 13560 3.998913 TGTACTCCAATCCATGCTCAA 57.001 42.857 0.00 0.00 0.00 3.02
9247 13561 4.508551 TGTACTCCAATCCATGCTCAAT 57.491 40.909 0.00 0.00 0.00 2.57
9248 13562 4.858850 TGTACTCCAATCCATGCTCAATT 58.141 39.130 0.00 0.00 0.00 2.32
9249 13563 5.263599 TGTACTCCAATCCATGCTCAATTT 58.736 37.500 0.00 0.00 0.00 1.82
9250 13564 5.716228 TGTACTCCAATCCATGCTCAATTTT 59.284 36.000 0.00 0.00 0.00 1.82
9251 13565 5.750352 ACTCCAATCCATGCTCAATTTTT 57.250 34.783 0.00 0.00 0.00 1.94
9270 13584 3.505464 TTTTTCGAAACGGAGGCAAAA 57.495 38.095 10.79 0.00 0.00 2.44
9271 13585 2.766970 TTTCGAAACGGAGGCAAAAG 57.233 45.000 6.47 0.00 0.00 2.27
9272 13586 1.670791 TTCGAAACGGAGGCAAAAGT 58.329 45.000 0.00 0.00 0.00 2.66
9273 13587 1.670791 TCGAAACGGAGGCAAAAGTT 58.329 45.000 0.00 0.00 0.00 2.66
9274 13588 2.018515 TCGAAACGGAGGCAAAAGTTT 58.981 42.857 0.00 0.37 39.21 2.66
9275 13589 2.424246 TCGAAACGGAGGCAAAAGTTTT 59.576 40.909 0.00 0.00 37.00 2.43
9276 13590 2.533942 CGAAACGGAGGCAAAAGTTTTG 59.466 45.455 21.60 21.60 37.00 2.44
9277 13591 1.934589 AACGGAGGCAAAAGTTTTGC 58.065 45.000 34.99 34.99 44.22 3.68
9285 13599 3.011949 GCAAAAGTTTTGCCTCATCGA 57.988 42.857 33.57 0.00 39.38 3.59
9286 13600 3.578688 GCAAAAGTTTTGCCTCATCGAT 58.421 40.909 33.57 0.00 39.38 3.59
9287 13601 3.989817 GCAAAAGTTTTGCCTCATCGATT 59.010 39.130 33.57 0.00 39.38 3.34
9288 13602 5.160641 GCAAAAGTTTTGCCTCATCGATTA 58.839 37.500 33.57 0.00 39.38 1.75
9289 13603 5.633182 GCAAAAGTTTTGCCTCATCGATTAA 59.367 36.000 33.57 0.00 39.38 1.40
9290 13604 6.311200 GCAAAAGTTTTGCCTCATCGATTAAT 59.689 34.615 33.57 0.00 39.38 1.40
9291 13605 7.148590 GCAAAAGTTTTGCCTCATCGATTAATT 60.149 33.333 33.57 0.00 39.38 1.40
9292 13606 9.352784 CAAAAGTTTTGCCTCATCGATTAATTA 57.647 29.630 15.06 0.00 0.00 1.40
9293 13607 9.921637 AAAAGTTTTGCCTCATCGATTAATTAA 57.078 25.926 0.00 0.00 0.00 1.40
9294 13608 9.573133 AAAGTTTTGCCTCATCGATTAATTAAG 57.427 29.630 3.94 0.00 0.00 1.85
9295 13609 8.506168 AGTTTTGCCTCATCGATTAATTAAGA 57.494 30.769 3.94 0.00 0.00 2.10
9296 13610 8.956426 AGTTTTGCCTCATCGATTAATTAAGAA 58.044 29.630 3.94 0.00 0.00 2.52
9297 13611 9.226345 GTTTTGCCTCATCGATTAATTAAGAAG 57.774 33.333 3.94 0.00 0.00 2.85
9298 13612 8.731275 TTTGCCTCATCGATTAATTAAGAAGA 57.269 30.769 3.94 3.72 0.00 2.87
9299 13613 8.731275 TTGCCTCATCGATTAATTAAGAAGAA 57.269 30.769 3.94 0.00 0.00 2.52
9300 13614 8.370493 TGCCTCATCGATTAATTAAGAAGAAG 57.630 34.615 3.94 1.26 0.00 2.85
9301 13615 8.204160 TGCCTCATCGATTAATTAAGAAGAAGA 58.796 33.333 3.94 5.03 0.00 2.87
9302 13616 8.707839 GCCTCATCGATTAATTAAGAAGAAGAG 58.292 37.037 16.89 16.89 0.00 2.85
9303 13617 9.973450 CCTCATCGATTAATTAAGAAGAAGAGA 57.027 33.333 21.25 12.30 0.00 3.10
9309 13623 9.657121 CGATTAATTAAGAAGAAGAGAATTGCC 57.343 33.333 3.94 0.00 0.00 4.52
9310 13624 9.958234 GATTAATTAAGAAGAAGAGAATTGCCC 57.042 33.333 3.94 0.00 0.00 5.36
9311 13625 8.877864 TTAATTAAGAAGAAGAGAATTGCCCA 57.122 30.769 0.00 0.00 0.00 5.36
9312 13626 7.401955 AATTAAGAAGAAGAGAATTGCCCAG 57.598 36.000 0.00 0.00 0.00 4.45
9313 13627 4.379302 AAGAAGAAGAGAATTGCCCAGT 57.621 40.909 0.00 0.00 0.00 4.00
9314 13628 4.379302 AGAAGAAGAGAATTGCCCAGTT 57.621 40.909 0.00 0.00 0.00 3.16
9315 13629 5.505181 AGAAGAAGAGAATTGCCCAGTTA 57.495 39.130 0.00 0.00 0.00 2.24
9316 13630 5.880901 AGAAGAAGAGAATTGCCCAGTTAA 58.119 37.500 0.00 0.00 0.00 2.01
9317 13631 6.488715 AGAAGAAGAGAATTGCCCAGTTAAT 58.511 36.000 0.00 0.00 0.00 1.40
9318 13632 6.950619 AGAAGAAGAGAATTGCCCAGTTAATT 59.049 34.615 0.00 0.00 0.00 1.40
9319 13633 8.109634 AGAAGAAGAGAATTGCCCAGTTAATTA 58.890 33.333 0.00 0.00 0.00 1.40
9320 13634 8.650143 AAGAAGAGAATTGCCCAGTTAATTAA 57.350 30.769 0.00 0.00 0.00 1.40
9321 13635 8.056407 AGAAGAGAATTGCCCAGTTAATTAAC 57.944 34.615 18.77 18.77 36.46 2.01
9322 13636 6.436843 AGAGAATTGCCCAGTTAATTAACG 57.563 37.500 19.92 15.03 40.96 3.18
9323 13637 5.357032 AGAGAATTGCCCAGTTAATTAACGG 59.643 40.000 19.92 21.15 40.96 4.44
9324 13638 5.258051 AGAATTGCCCAGTTAATTAACGGA 58.742 37.500 26.78 13.37 40.96 4.69
9325 13639 5.712917 AGAATTGCCCAGTTAATTAACGGAA 59.287 36.000 26.78 18.98 40.96 4.30
9326 13640 5.986501 ATTGCCCAGTTAATTAACGGAAA 57.013 34.783 26.78 21.17 40.96 3.13
9327 13641 5.786264 TTGCCCAGTTAATTAACGGAAAA 57.214 34.783 26.78 20.29 40.96 2.29
9328 13642 5.123805 TGCCCAGTTAATTAACGGAAAAC 57.876 39.130 26.78 18.05 40.96 2.43
9329 13643 4.022155 TGCCCAGTTAATTAACGGAAAACC 60.022 41.667 26.78 14.02 40.96 3.27
9330 13644 4.022155 GCCCAGTTAATTAACGGAAAACCA 60.022 41.667 26.78 0.00 40.96 3.67
9331 13645 5.705902 CCCAGTTAATTAACGGAAAACCAG 58.294 41.667 26.78 12.86 40.96 4.00
9332 13646 5.336134 CCCAGTTAATTAACGGAAAACCAGG 60.336 44.000 26.78 16.42 40.96 4.45
9333 13647 5.158494 CAGTTAATTAACGGAAAACCAGGC 58.842 41.667 19.91 0.00 40.96 4.85
9334 13648 4.083164 AGTTAATTAACGGAAAACCAGGCG 60.083 41.667 19.92 0.00 40.96 5.52
9335 13649 2.188062 ATTAACGGAAAACCAGGCGA 57.812 45.000 0.00 0.00 0.00 5.54
9336 13650 1.964552 TTAACGGAAAACCAGGCGAA 58.035 45.000 0.00 0.00 0.00 4.70
9337 13651 1.964552 TAACGGAAAACCAGGCGAAA 58.035 45.000 0.00 0.00 0.00 3.46
9338 13652 1.104630 AACGGAAAACCAGGCGAAAA 58.895 45.000 0.00 0.00 0.00 2.29
9339 13653 0.382873 ACGGAAAACCAGGCGAAAAC 59.617 50.000 0.00 0.00 0.00 2.43
9340 13654 0.318360 CGGAAAACCAGGCGAAAACC 60.318 55.000 0.00 0.00 0.00 3.27
9341 13655 0.747852 GGAAAACCAGGCGAAAACCA 59.252 50.000 0.00 0.00 0.00 3.67
9342 13656 1.137282 GGAAAACCAGGCGAAAACCAA 59.863 47.619 0.00 0.00 0.00 3.67
9343 13657 2.224185 GGAAAACCAGGCGAAAACCAAT 60.224 45.455 0.00 0.00 0.00 3.16
9344 13658 3.006003 GGAAAACCAGGCGAAAACCAATA 59.994 43.478 0.00 0.00 0.00 1.90
9345 13659 3.653539 AAACCAGGCGAAAACCAATAC 57.346 42.857 0.00 0.00 0.00 1.89
9346 13660 2.279935 ACCAGGCGAAAACCAATACA 57.720 45.000 0.00 0.00 0.00 2.29
9347 13661 2.588620 ACCAGGCGAAAACCAATACAA 58.411 42.857 0.00 0.00 0.00 2.41
9348 13662 3.161866 ACCAGGCGAAAACCAATACAAT 58.838 40.909 0.00 0.00 0.00 2.71
9349 13663 3.192633 ACCAGGCGAAAACCAATACAATC 59.807 43.478 0.00 0.00 0.00 2.67
9350 13664 3.425404 CAGGCGAAAACCAATACAATCG 58.575 45.455 0.00 0.00 0.00 3.34
9351 13665 3.126171 CAGGCGAAAACCAATACAATCGA 59.874 43.478 0.00 0.00 32.38 3.59
9352 13666 3.754323 AGGCGAAAACCAATACAATCGAA 59.246 39.130 0.00 0.00 32.38 3.71
9353 13667 4.095610 GGCGAAAACCAATACAATCGAAG 58.904 43.478 0.00 0.00 32.38 3.79
9354 13668 3.542310 GCGAAAACCAATACAATCGAAGC 59.458 43.478 0.00 0.00 32.38 3.86
9355 13669 4.717991 CGAAAACCAATACAATCGAAGCA 58.282 39.130 0.00 0.00 32.38 3.91
9356 13670 4.553429 CGAAAACCAATACAATCGAAGCAC 59.447 41.667 0.00 0.00 32.38 4.40
9357 13671 5.446143 AAAACCAATACAATCGAAGCACA 57.554 34.783 0.00 0.00 0.00 4.57
9358 13672 5.643379 AAACCAATACAATCGAAGCACAT 57.357 34.783 0.00 0.00 0.00 3.21
9359 13673 6.751514 AAACCAATACAATCGAAGCACATA 57.248 33.333 0.00 0.00 0.00 2.29
9360 13674 6.942532 AACCAATACAATCGAAGCACATAT 57.057 33.333 0.00 0.00 0.00 1.78
9361 13675 6.304356 ACCAATACAATCGAAGCACATATG 57.696 37.500 0.00 0.00 0.00 1.78
9362 13676 6.054941 ACCAATACAATCGAAGCACATATGA 58.945 36.000 10.38 0.00 0.00 2.15
9363 13677 6.542005 ACCAATACAATCGAAGCACATATGAA 59.458 34.615 10.38 0.00 0.00 2.57
9364 13678 6.852853 CCAATACAATCGAAGCACATATGAAC 59.147 38.462 10.38 0.40 0.00 3.18
9365 13679 7.254898 CCAATACAATCGAAGCACATATGAACT 60.255 37.037 10.38 2.99 0.00 3.01
9366 13680 8.764287 CAATACAATCGAAGCACATATGAACTA 58.236 33.333 10.38 0.00 0.00 2.24
9367 13681 6.589830 ACAATCGAAGCACATATGAACTAC 57.410 37.500 10.38 0.00 0.00 2.73
9368 13682 6.341316 ACAATCGAAGCACATATGAACTACT 58.659 36.000 10.38 0.00 0.00 2.57
9369 13683 6.477033 ACAATCGAAGCACATATGAACTACTC 59.523 38.462 10.38 1.27 0.00 2.59
9370 13684 5.576447 TCGAAGCACATATGAACTACTCA 57.424 39.130 10.38 0.00 38.81 3.41
9371 13685 5.340803 TCGAAGCACATATGAACTACTCAC 58.659 41.667 10.38 0.00 36.69 3.51
9372 13686 5.102313 CGAAGCACATATGAACTACTCACA 58.898 41.667 10.38 0.00 36.69 3.58
9373 13687 5.004821 CGAAGCACATATGAACTACTCACAC 59.995 44.000 10.38 0.00 36.69 3.82
9374 13688 5.405935 AGCACATATGAACTACTCACACA 57.594 39.130 10.38 0.00 36.69 3.72
9375 13689 5.793817 AGCACATATGAACTACTCACACAA 58.206 37.500 10.38 0.00 36.69 3.33
9376 13690 5.639506 AGCACATATGAACTACTCACACAAC 59.360 40.000 10.38 0.00 36.69 3.32
9377 13691 5.408299 GCACATATGAACTACTCACACAACA 59.592 40.000 10.38 0.00 36.69 3.33
9378 13692 6.092670 GCACATATGAACTACTCACACAACAT 59.907 38.462 10.38 0.00 36.69 2.71
9379 13693 7.458677 CACATATGAACTACTCACACAACATG 58.541 38.462 10.38 0.00 36.69 3.21
9380 13694 6.595326 ACATATGAACTACTCACACAACATGG 59.405 38.462 10.38 0.00 36.69 3.66
9381 13695 4.681074 TGAACTACTCACACAACATGGA 57.319 40.909 0.00 0.00 0.00 3.41
9382 13696 5.029807 TGAACTACTCACACAACATGGAA 57.970 39.130 0.00 0.00 0.00 3.53
9383 13697 4.814234 TGAACTACTCACACAACATGGAAC 59.186 41.667 0.00 0.00 0.00 3.62
9384 13698 3.740115 ACTACTCACACAACATGGAACC 58.260 45.455 0.00 0.00 0.00 3.62
9385 13699 1.981256 ACTCACACAACATGGAACCC 58.019 50.000 0.00 0.00 0.00 4.11
9386 13700 1.247567 CTCACACAACATGGAACCCC 58.752 55.000 0.00 0.00 0.00 4.95
9388 13702 0.673437 CACACAACATGGAACCCCAC 59.327 55.000 0.00 0.00 46.98 4.61
9389 13703 0.260230 ACACAACATGGAACCCCACA 59.740 50.000 0.00 0.00 46.98 4.17
9390 13704 1.342474 ACACAACATGGAACCCCACAA 60.342 47.619 0.00 0.00 46.98 3.33
9391 13705 1.759445 CACAACATGGAACCCCACAAA 59.241 47.619 0.00 0.00 46.98 2.83
9392 13706 1.760029 ACAACATGGAACCCCACAAAC 59.240 47.619 0.00 0.00 46.98 2.93
9393 13707 1.036707 AACATGGAACCCCACAAACG 58.963 50.000 0.00 0.00 46.98 3.60
9394 13708 1.288752 CATGGAACCCCACAAACGC 59.711 57.895 0.00 0.00 46.98 4.84
9395 13709 1.152652 ATGGAACCCCACAAACGCA 60.153 52.632 0.00 0.00 46.98 5.24
9396 13710 1.460273 ATGGAACCCCACAAACGCAC 61.460 55.000 0.00 0.00 46.98 5.34
9397 13711 2.122167 GGAACCCCACAAACGCACA 61.122 57.895 0.00 0.00 0.00 4.57
9398 13712 1.358759 GAACCCCACAAACGCACAG 59.641 57.895 0.00 0.00 0.00 3.66
9399 13713 1.077357 AACCCCACAAACGCACAGA 60.077 52.632 0.00 0.00 0.00 3.41
9400 13714 0.467290 AACCCCACAAACGCACAGAT 60.467 50.000 0.00 0.00 0.00 2.90
9401 13715 1.172180 ACCCCACAAACGCACAGATG 61.172 55.000 0.00 0.00 0.00 2.90
9402 13716 1.580942 CCCACAAACGCACAGATGG 59.419 57.895 0.00 0.00 0.00 3.51
9403 13717 1.081242 CCACAAACGCACAGATGGC 60.081 57.895 0.00 0.00 0.00 4.40
9404 13718 1.081242 CACAAACGCACAGATGGCC 60.081 57.895 0.00 0.00 0.00 5.36
9405 13719 2.268076 ACAAACGCACAGATGGCCC 61.268 57.895 0.00 0.00 0.00 5.80
9406 13720 3.055719 AAACGCACAGATGGCCCG 61.056 61.111 0.00 0.00 0.00 6.13
9407 13721 3.842925 AAACGCACAGATGGCCCGT 62.843 57.895 0.00 0.00 0.00 5.28
9408 13722 4.760047 ACGCACAGATGGCCCGTC 62.760 66.667 0.00 0.00 0.00 4.79
9409 13723 4.758251 CGCACAGATGGCCCGTCA 62.758 66.667 5.60 0.00 0.00 4.35
9410 13724 3.127533 GCACAGATGGCCCGTCAC 61.128 66.667 5.60 0.00 0.00 3.67
9411 13725 2.347114 CACAGATGGCCCGTCACA 59.653 61.111 5.60 0.00 0.00 3.58
9412 13726 2.034879 CACAGATGGCCCGTCACAC 61.035 63.158 5.60 0.00 0.00 3.82
9413 13727 2.217038 ACAGATGGCCCGTCACACT 61.217 57.895 5.60 0.00 0.00 3.55
9414 13728 1.003355 CAGATGGCCCGTCACACTT 60.003 57.895 5.60 0.00 0.00 3.16
9415 13729 1.003355 AGATGGCCCGTCACACTTG 60.003 57.895 5.60 0.00 0.00 3.16
9416 13730 2.672996 ATGGCCCGTCACACTTGC 60.673 61.111 0.00 0.00 0.00 4.01
9417 13731 4.947147 TGGCCCGTCACACTTGCC 62.947 66.667 0.00 0.00 42.49 4.52
9419 13733 4.980805 GCCCGTCACACTTGCCGA 62.981 66.667 0.00 0.00 0.00 5.54
9420 13734 2.738521 CCCGTCACACTTGCCGAG 60.739 66.667 0.00 0.00 0.00 4.63
9421 13735 2.029073 CCGTCACACTTGCCGAGT 59.971 61.111 0.00 0.00 39.89 4.18
9422 13736 1.287815 CCGTCACACTTGCCGAGTA 59.712 57.895 0.00 0.00 36.65 2.59
9423 13737 0.108804 CCGTCACACTTGCCGAGTAT 60.109 55.000 0.00 0.00 36.65 2.12
9424 13738 1.133598 CCGTCACACTTGCCGAGTATA 59.866 52.381 0.00 0.00 36.65 1.47
9425 13739 2.182825 CGTCACACTTGCCGAGTATAC 58.817 52.381 0.00 0.00 36.65 1.47
9426 13740 2.414957 CGTCACACTTGCCGAGTATACA 60.415 50.000 5.50 0.00 36.65 2.29
9427 13741 3.581755 GTCACACTTGCCGAGTATACAA 58.418 45.455 5.50 0.00 36.65 2.41
9428 13742 3.367025 GTCACACTTGCCGAGTATACAAC 59.633 47.826 5.50 0.00 36.65 3.32
9429 13743 3.006003 TCACACTTGCCGAGTATACAACA 59.994 43.478 5.50 0.00 36.65 3.33
9430 13744 3.932710 CACACTTGCCGAGTATACAACAT 59.067 43.478 5.50 0.00 36.65 2.71
9431 13745 4.032900 CACACTTGCCGAGTATACAACATC 59.967 45.833 5.50 0.00 36.65 3.06
9432 13746 3.555956 CACTTGCCGAGTATACAACATCC 59.444 47.826 5.50 0.00 36.65 3.51
9433 13747 3.196901 ACTTGCCGAGTATACAACATCCA 59.803 43.478 5.50 0.00 36.65 3.41
9434 13748 3.173668 TGCCGAGTATACAACATCCAC 57.826 47.619 5.50 0.00 0.00 4.02
9435 13749 2.498078 TGCCGAGTATACAACATCCACA 59.502 45.455 5.50 0.00 0.00 4.17
9436 13750 3.055747 TGCCGAGTATACAACATCCACAA 60.056 43.478 5.50 0.00 0.00 3.33
9437 13751 3.936453 GCCGAGTATACAACATCCACAAA 59.064 43.478 5.50 0.00 0.00 2.83
9438 13752 4.201783 GCCGAGTATACAACATCCACAAAC 60.202 45.833 5.50 0.00 0.00 2.93
9439 13753 4.331717 CCGAGTATACAACATCCACAAACC 59.668 45.833 5.50 0.00 0.00 3.27
9440 13754 4.331717 CGAGTATACAACATCCACAAACCC 59.668 45.833 5.50 0.00 0.00 4.11
9441 13755 4.595986 AGTATACAACATCCACAAACCCC 58.404 43.478 5.50 0.00 0.00 4.95
9442 13756 1.898902 TACAACATCCACAAACCCCG 58.101 50.000 0.00 0.00 0.00 5.73
9443 13757 0.183971 ACAACATCCACAAACCCCGA 59.816 50.000 0.00 0.00 0.00 5.14
9444 13758 0.881118 CAACATCCACAAACCCCGAG 59.119 55.000 0.00 0.00 0.00 4.63
9445 13759 0.251165 AACATCCACAAACCCCGAGG 60.251 55.000 0.00 0.00 40.04 4.63
9446 13760 2.046285 CATCCACAAACCCCGAGGC 61.046 63.158 0.00 0.00 36.11 4.70
9447 13761 2.534396 ATCCACAAACCCCGAGGCA 61.534 57.895 0.00 0.00 36.11 4.75
9448 13762 2.764637 ATCCACAAACCCCGAGGCAC 62.765 60.000 0.00 0.00 36.11 5.01
9449 13763 2.983592 CACAAACCCCGAGGCACC 60.984 66.667 0.00 0.00 36.11 5.01
9450 13764 3.175710 ACAAACCCCGAGGCACCT 61.176 61.111 0.00 0.00 36.11 4.00
9451 13765 2.359975 CAAACCCCGAGGCACCTC 60.360 66.667 6.62 6.62 39.55 3.85
9452 13766 3.647771 AAACCCCGAGGCACCTCC 61.648 66.667 11.09 0.00 39.77 4.30
9456 13770 4.410400 CCCGAGGCACCTCCCAAC 62.410 72.222 11.09 0.00 39.77 3.77
9457 13771 4.410400 CCGAGGCACCTCCCAACC 62.410 72.222 11.09 0.00 39.77 3.77
9458 13772 4.410400 CGAGGCACCTCCCAACCC 62.410 72.222 11.09 0.00 39.77 4.11
9459 13773 3.256960 GAGGCACCTCCCAACCCA 61.257 66.667 5.30 0.00 37.11 4.51
9460 13774 2.780924 AGGCACCTCCCAACCCAA 60.781 61.111 0.00 0.00 34.51 4.12
9461 13775 2.200092 GGCACCTCCCAACCCAAA 59.800 61.111 0.00 0.00 0.00 3.28
9462 13776 1.458588 GGCACCTCCCAACCCAAAA 60.459 57.895 0.00 0.00 0.00 2.44
9463 13777 1.745890 GCACCTCCCAACCCAAAAC 59.254 57.895 0.00 0.00 0.00 2.43
9464 13778 1.754380 GCACCTCCCAACCCAAAACC 61.754 60.000 0.00 0.00 0.00 3.27
9465 13779 0.397816 CACCTCCCAACCCAAAACCA 60.398 55.000 0.00 0.00 0.00 3.67
9466 13780 0.397957 ACCTCCCAACCCAAAACCAC 60.398 55.000 0.00 0.00 0.00 4.16
9467 13781 0.397816 CCTCCCAACCCAAAACCACA 60.398 55.000 0.00 0.00 0.00 4.17
9468 13782 1.490574 CTCCCAACCCAAAACCACAA 58.509 50.000 0.00 0.00 0.00 3.33
9469 13783 1.138069 CTCCCAACCCAAAACCACAAC 59.862 52.381 0.00 0.00 0.00 3.32
9470 13784 0.179234 CCCAACCCAAAACCACAACC 59.821 55.000 0.00 0.00 0.00 3.77
9471 13785 0.179234 CCAACCCAAAACCACAACCC 59.821 55.000 0.00 0.00 0.00 4.11
9472 13786 0.905357 CAACCCAAAACCACAACCCA 59.095 50.000 0.00 0.00 0.00 4.51
9473 13787 1.279271 CAACCCAAAACCACAACCCAA 59.721 47.619 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.181479 CCACGGAGAAATTAGATCCACGA 60.181 47.826 0.00 0.00 32.31 4.35
1 2 3.123804 CCACGGAGAAATTAGATCCACG 58.876 50.000 0.00 0.00 32.31 4.94
3 4 3.380393 TCCCACGGAGAAATTAGATCCA 58.620 45.455 0.00 0.00 32.31 3.41
4 5 4.417426 TTCCCACGGAGAAATTAGATCC 57.583 45.455 0.00 0.00 31.21 3.36
5 6 4.273724 GCTTTCCCACGGAGAAATTAGATC 59.726 45.833 0.00 0.00 33.01 2.75
6 7 4.200092 GCTTTCCCACGGAGAAATTAGAT 58.800 43.478 0.00 0.00 33.01 1.98
8 9 2.351726 CGCTTTCCCACGGAGAAATTAG 59.648 50.000 0.00 0.00 33.01 1.73
59 60 8.729805 TTACATGTACTGATGATGTGCATTTA 57.270 30.769 4.68 0.00 38.37 1.40
99 100 6.764308 TCAATTTCTCTTCATCCATTGGTC 57.236 37.500 1.86 0.00 0.00 4.02
122 123 0.112412 AATTCTCGCCCCAGTTGGTT 59.888 50.000 0.00 0.00 0.00 3.67
159 193 1.303091 GGCCACCCAATCACGTGTAC 61.303 60.000 16.51 0.00 0.00 2.90
188 222 2.728318 CGACATGAGCAATGACCGATAG 59.272 50.000 0.00 0.00 38.72 2.08
198 232 1.003839 GGGGTGTCGACATGAGCAA 60.004 57.895 23.12 0.00 0.00 3.91
217 251 1.661617 CATCGCCCATTCGTTTCGTTA 59.338 47.619 0.00 0.00 0.00 3.18
225 259 0.236711 GAGATTGCATCGCCCATTCG 59.763 55.000 0.00 0.00 0.00 3.34
233 267 1.799403 GGCTCATCTGAGATTGCATCG 59.201 52.381 11.34 0.00 44.74 3.84
245 279 0.467384 CTCCATCCAACGGCTCATCT 59.533 55.000 0.00 0.00 0.00 2.90
247 281 0.982852 TCCTCCATCCAACGGCTCAT 60.983 55.000 0.00 0.00 0.00 2.90
321 355 3.288964 TGGGTGTGGTTAAACAAATCGT 58.711 40.909 0.00 0.00 0.00 3.73
385 419 8.171164 TGCAGAGTATACTACTACGACTAGTA 57.829 38.462 5.09 0.00 39.59 1.82
386 420 7.048629 TGCAGAGTATACTACTACGACTAGT 57.951 40.000 5.09 0.00 39.59 2.57
387 421 6.089820 GCTGCAGAGTATACTACTACGACTAG 59.910 46.154 20.43 0.00 39.59 2.57
466 502 1.844771 GCCGCGGTAGGTTCGTTTTT 61.845 55.000 28.70 0.00 0.00 1.94
467 503 2.319841 GCCGCGGTAGGTTCGTTTT 61.320 57.895 28.70 0.00 0.00 2.43
508 554 0.171007 CAACATGCATGTCCCGGAAC 59.829 55.000 31.45 0.00 40.80 3.62
511 557 1.656818 GGTCAACATGCATGTCCCGG 61.657 60.000 31.45 20.31 40.80 5.73
514 560 1.200716 CAGTGGTCAACATGCATGTCC 59.799 52.381 31.45 26.63 40.80 4.02
803 862 4.512484 GAGAAGAGAAGGGAATGGTTGAG 58.488 47.826 0.00 0.00 0.00 3.02
865 937 1.405121 GCTTGGGGTACGAACTGGTAG 60.405 57.143 0.00 0.00 0.00 3.18
936 1011 1.376942 CTCTCTGCACTGGCTTGGG 60.377 63.158 0.00 0.00 41.91 4.12
969 1046 6.540551 CCTTTGCTTACTTATCTTCCTCTTCC 59.459 42.308 0.00 0.00 0.00 3.46
989 1066 1.863454 CTCGATCCATCTTCGCCTTTG 59.137 52.381 0.00 0.00 36.56 2.77
1443 1546 1.982938 AGGCGGCTTTACCTCGAGT 60.983 57.895 12.31 2.17 35.61 4.18
1481 1596 2.032634 GTGGCATCGGTTTCGCAGA 61.033 57.895 0.00 0.00 36.13 4.26
1486 1601 0.605319 TGGACTGTGGCATCGGTTTC 60.605 55.000 0.00 0.00 0.00 2.78
1547 1665 5.670792 ATGATCAACATGCTTGTTCCAAT 57.329 34.783 14.57 9.03 44.24 3.16
1615 1733 4.007644 CACCAGTGCTCGGGCTCA 62.008 66.667 9.62 0.00 39.59 4.26
1642 1760 4.503296 GCCCATACTCATCGACTAATTGGT 60.503 45.833 0.00 0.00 0.00 3.67
1646 1764 3.306364 GCAGCCCATACTCATCGACTAAT 60.306 47.826 0.00 0.00 0.00 1.73
1918 5690 3.308438 ACGGTAGTAATTCTGCAACGT 57.692 42.857 0.00 0.00 0.00 3.99
1919 5691 4.634991 GAAACGGTAGTAATTCTGCAACG 58.365 43.478 0.00 0.00 0.00 4.10
1945 5717 8.100791 AGAGTAATATTTTGTGCAGGACAAGTA 58.899 33.333 7.62 6.10 45.43 2.24
2030 5830 9.631452 CAATTTGAAAGGAGAAAGAATTAGGAC 57.369 33.333 0.00 0.00 0.00 3.85
2040 5840 9.063615 GGACTTAGTACAATTTGAAAGGAGAAA 57.936 33.333 2.79 0.00 0.00 2.52
2107 5911 8.314751 CACTCCTAAGATCCTTTTTCTTGTCTA 58.685 37.037 0.00 0.00 35.19 2.59
2108 5912 7.164803 CACTCCTAAGATCCTTTTTCTTGTCT 58.835 38.462 0.00 0.00 35.19 3.41
2147 5952 3.241067 TGTTGGGCTACTTTACGCTAG 57.759 47.619 0.00 0.00 0.00 3.42
2170 6004 2.539338 GGCGTCGCAACAGTTTGGA 61.539 57.895 20.50 0.00 32.81 3.53
2171 6005 2.051345 GGCGTCGCAACAGTTTGG 60.051 61.111 20.50 0.00 32.81 3.28
2172 6006 2.425124 CGGCGTCGCAACAGTTTG 60.425 61.111 20.50 0.00 35.62 2.93
2210 6047 5.184340 AGTGCCGTGTGTCTAGTATTATC 57.816 43.478 0.00 0.00 0.00 1.75
2211 6048 4.643334 TGAGTGCCGTGTGTCTAGTATTAT 59.357 41.667 0.00 0.00 0.00 1.28
2212 6049 4.011698 TGAGTGCCGTGTGTCTAGTATTA 58.988 43.478 0.00 0.00 0.00 0.98
2213 6050 2.823747 TGAGTGCCGTGTGTCTAGTATT 59.176 45.455 0.00 0.00 0.00 1.89
2214 6051 2.443416 TGAGTGCCGTGTGTCTAGTAT 58.557 47.619 0.00 0.00 0.00 2.12
2215 6052 1.900245 TGAGTGCCGTGTGTCTAGTA 58.100 50.000 0.00 0.00 0.00 1.82
2216 6053 1.037493 TTGAGTGCCGTGTGTCTAGT 58.963 50.000 0.00 0.00 0.00 2.57
2217 6054 2.148916 TTTGAGTGCCGTGTGTCTAG 57.851 50.000 0.00 0.00 0.00 2.43
2218 6055 2.206750 GTTTTGAGTGCCGTGTGTCTA 58.793 47.619 0.00 0.00 0.00 2.59
2219 6056 1.014352 GTTTTGAGTGCCGTGTGTCT 58.986 50.000 0.00 0.00 0.00 3.41
2220 6057 0.730265 TGTTTTGAGTGCCGTGTGTC 59.270 50.000 0.00 0.00 0.00 3.67
2223 6060 1.535860 GCATTGTTTTGAGTGCCGTGT 60.536 47.619 0.00 0.00 0.00 4.49
2225 6062 1.001378 GAGCATTGTTTTGAGTGCCGT 60.001 47.619 0.00 0.00 38.31 5.68
2226 6063 1.666888 GGAGCATTGTTTTGAGTGCCG 60.667 52.381 0.00 0.00 38.31 5.69
2227 6064 1.666888 CGGAGCATTGTTTTGAGTGCC 60.667 52.381 0.00 0.00 38.31 5.01
2228 6065 1.689959 CGGAGCATTGTTTTGAGTGC 58.310 50.000 0.00 0.00 37.84 4.40
2272 6112 0.321830 CGGCGGAGGGGTTTTCTTAA 60.322 55.000 0.00 0.00 0.00 1.85
2276 6119 2.112815 CATCGGCGGAGGGGTTTTC 61.113 63.158 7.21 0.00 0.00 2.29
2533 6384 5.605534 GAGCAATCAACAGGCTTAGATAGA 58.394 41.667 0.00 0.00 38.15 1.98
2534 6385 4.447054 CGAGCAATCAACAGGCTTAGATAG 59.553 45.833 0.00 0.00 38.15 2.08
2535 6386 4.371786 CGAGCAATCAACAGGCTTAGATA 58.628 43.478 0.00 0.00 38.15 1.98
2536 6387 3.201290 CGAGCAATCAACAGGCTTAGAT 58.799 45.455 0.00 0.00 38.15 1.98
2691 6542 1.402456 GCCAGAAGAAGCGTCGTCTTA 60.402 52.381 14.71 0.00 40.18 2.10
2817 6668 0.101219 CGATGTGGAGATCGTGCTGA 59.899 55.000 0.00 0.00 40.32 4.26
2841 6692 1.890894 CGTCTCCCTCACGGTCATT 59.109 57.895 0.00 0.00 33.46 2.57
2943 6815 0.320247 GCCTATCGCCAGGATGACAG 60.320 60.000 6.34 0.00 39.69 3.51
2951 6823 1.006337 GCTCAGAGCCTATCGCCAG 60.006 63.158 11.84 0.00 38.78 4.85
3119 6991 9.185680 TGTCTTCAATACTAAGCTAGTCACATA 57.814 33.333 0.00 0.00 40.14 2.29
3135 7007 7.814107 GGCTTGTTCAAATGATTGTCTTCAATA 59.186 33.333 0.00 0.00 43.33 1.90
3341 7217 2.935042 ACAAGACATGAGAAGTCGTCG 58.065 47.619 0.00 0.00 40.84 5.12
3370 7246 6.212235 CAGTCCTAGTATCTGCAGTTACATG 58.788 44.000 28.22 21.04 0.00 3.21
3626 7502 0.311790 ACAAGCATTTCACCTGTGCG 59.688 50.000 0.00 0.00 43.37 5.34
3775 7651 0.403271 ATGTTTCAGGAGCTGGCTGT 59.597 50.000 0.00 0.00 31.51 4.40
4180 8056 4.025858 GCCAGAGCAGCAGGGTGA 62.026 66.667 2.13 0.00 39.53 4.02
4361 8237 4.397417 GCAAAGGTTCAGATTGATGCTACT 59.603 41.667 0.00 0.00 28.06 2.57
4499 8375 8.768955 GCAAAACCATTAAACATTATTGTGTCA 58.231 29.630 0.00 0.00 35.83 3.58
4745 8621 9.277783 ACATAACTGCCTAAGAAGCAATATAAG 57.722 33.333 0.00 0.00 40.35 1.73
4811 8688 5.946377 TCATTCAGACTTCACAGAGCTAGTA 59.054 40.000 0.00 0.00 0.00 1.82
4910 8792 5.047802 GTCTCTTCCAATTCCAGCAATGAAA 60.048 40.000 0.00 0.00 0.00 2.69
5057 8939 7.604545 TCAACATTTAGTTCCATCGTTGTCATA 59.395 33.333 0.00 0.00 38.74 2.15
5239 9121 6.358762 GTGACTTTGATTTCTTCTCAAGACG 58.641 40.000 0.00 0.00 37.23 4.18
5663 9547 8.158025 TCCTAGAATTCTTTTCCTTATGACCA 57.842 34.615 14.36 0.00 0.00 4.02
5850 9734 4.713824 ATTGTGCTCTCATGTTCATTGG 57.286 40.909 0.00 0.00 0.00 3.16
7243 11159 5.123936 GTGTAGGATGGGTTTCTCCAATAC 58.876 45.833 0.00 0.00 40.62 1.89
7653 11597 8.616076 CCAGTTCTTAAAGGTCATTCATACATC 58.384 37.037 0.00 0.00 0.00 3.06
7671 11615 1.347707 TGACTCCGATTGCCAGTTCTT 59.652 47.619 0.00 0.00 0.00 2.52
7708 11662 1.081892 CTCCGATTGCCAGTTCTGTG 58.918 55.000 0.00 0.00 0.00 3.66
7712 11666 1.079503 GTGACTCCGATTGCCAGTTC 58.920 55.000 0.00 0.00 0.00 3.01
7713 11667 0.396435 TGTGACTCCGATTGCCAGTT 59.604 50.000 0.00 0.00 0.00 3.16
7714 11668 0.036952 CTGTGACTCCGATTGCCAGT 60.037 55.000 0.00 0.00 0.00 4.00
7715 11669 1.364626 GCTGTGACTCCGATTGCCAG 61.365 60.000 0.00 0.00 0.00 4.85
7716 11670 1.375908 GCTGTGACTCCGATTGCCA 60.376 57.895 0.00 0.00 0.00 4.92
7717 11671 2.109126 GGCTGTGACTCCGATTGCC 61.109 63.158 0.00 0.00 0.00 4.52
7718 11672 3.490890 GGCTGTGACTCCGATTGC 58.509 61.111 0.00 0.00 0.00 3.56
7729 11683 1.263217 GTGACTTTAACCACGGCTGTG 59.737 52.381 19.25 19.25 46.00 3.66
7730 11684 1.134340 TGTGACTTTAACCACGGCTGT 60.134 47.619 0.00 0.00 36.15 4.40
7731 11685 1.531149 CTGTGACTTTAACCACGGCTG 59.469 52.381 0.00 0.00 36.15 4.85
7732 11686 1.414919 TCTGTGACTTTAACCACGGCT 59.585 47.619 0.00 0.00 39.01 5.52
7733 11687 1.873698 TCTGTGACTTTAACCACGGC 58.126 50.000 0.00 0.00 39.01 5.68
7734 11688 3.247648 CAGTTCTGTGACTTTAACCACGG 59.752 47.826 0.00 0.00 40.15 4.94
7735 11689 3.247648 CCAGTTCTGTGACTTTAACCACG 59.752 47.826 0.00 0.00 36.15 4.94
7736 11690 3.003378 GCCAGTTCTGTGACTTTAACCAC 59.997 47.826 0.00 0.00 0.00 4.16
7737 11691 3.211045 GCCAGTTCTGTGACTTTAACCA 58.789 45.455 0.00 0.00 0.00 3.67
7738 11692 3.211045 TGCCAGTTCTGTGACTTTAACC 58.789 45.455 0.00 0.00 0.00 2.85
7739 11693 3.877508 ACTGCCAGTTCTGTGACTTTAAC 59.122 43.478 0.00 0.00 0.00 2.01
7740 11694 4.150897 ACTGCCAGTTCTGTGACTTTAA 57.849 40.909 0.00 0.00 0.00 1.52
7741 11695 3.838244 ACTGCCAGTTCTGTGACTTTA 57.162 42.857 0.00 0.00 0.00 1.85
7742 11696 2.717639 ACTGCCAGTTCTGTGACTTT 57.282 45.000 0.00 0.00 0.00 2.66
7743 11697 2.717639 AACTGCCAGTTCTGTGACTT 57.282 45.000 3.74 0.00 31.77 3.01
7744 11698 2.717639 AAACTGCCAGTTCTGTGACT 57.282 45.000 11.11 0.00 37.47 3.41
7745 11699 4.065088 TGATAAACTGCCAGTTCTGTGAC 58.935 43.478 11.11 1.15 37.47 3.67
7746 11700 4.350368 TGATAAACTGCCAGTTCTGTGA 57.650 40.909 11.11 0.00 37.47 3.58
7747 11701 4.142534 CCATGATAAACTGCCAGTTCTGTG 60.143 45.833 11.11 6.08 37.47 3.66
7748 11702 4.012374 CCATGATAAACTGCCAGTTCTGT 58.988 43.478 11.11 0.00 37.47 3.41
7749 11703 3.181493 GCCATGATAAACTGCCAGTTCTG 60.181 47.826 11.11 4.21 37.47 3.02
7750 11704 3.019564 GCCATGATAAACTGCCAGTTCT 58.980 45.455 11.11 1.23 37.47 3.01
8104 12058 8.976986 AGAAATGAAAAATGTATCAAGAGTGC 57.023 30.769 0.00 0.00 0.00 4.40
8174 12128 8.463930 TGAAGTAAAAGTTCAATGGATGAGTT 57.536 30.769 0.00 0.00 39.77 3.01
8709 12687 2.537401 GGTTTACATTCTCCGACGAGG 58.463 52.381 0.00 0.00 42.97 4.63
8765 12744 7.274447 TGAAGAATCAACAAAATTTCTGCCTT 58.726 30.769 0.00 0.00 30.99 4.35
8881 12868 7.091993 TGAGATGATAGTTACCCAAGGGATTTT 60.092 37.037 13.15 0.00 38.96 1.82
8882 12869 6.389869 TGAGATGATAGTTACCCAAGGGATTT 59.610 38.462 13.15 0.00 38.96 2.17
8883 12870 5.911178 TGAGATGATAGTTACCCAAGGGATT 59.089 40.000 13.15 0.00 38.96 3.01
8884 12871 5.476983 TGAGATGATAGTTACCCAAGGGAT 58.523 41.667 13.15 0.00 38.96 3.85
8886 12873 5.307976 TGATGAGATGATAGTTACCCAAGGG 59.692 44.000 2.91 2.91 42.03 3.95
9019 13332 1.133407 GCAAAACTCCACGGAAACACA 59.867 47.619 0.00 0.00 0.00 3.72
9021 13334 1.133407 GTGCAAAACTCCACGGAAACA 59.867 47.619 0.00 0.00 0.00 2.83
9026 13339 0.744281 AAAGGTGCAAAACTCCACGG 59.256 50.000 0.00 0.00 34.14 4.94
9029 13342 2.957491 CACAAAGGTGCAAAACTCCA 57.043 45.000 0.00 0.00 38.37 3.86
9130 13444 1.463674 CTGGCACCCCATTGAACTAC 58.536 55.000 0.00 0.00 41.21 2.73
9139 13453 2.029892 ATTGTTTCCCTGGCACCCCA 62.030 55.000 0.00 0.00 39.32 4.96
9140 13454 0.835971 AATTGTTTCCCTGGCACCCC 60.836 55.000 0.00 0.00 0.00 4.95
9141 13455 0.608130 GAATTGTTTCCCTGGCACCC 59.392 55.000 0.00 0.00 0.00 4.61
9142 13456 0.608130 GGAATTGTTTCCCTGGCACC 59.392 55.000 0.00 0.00 44.96 5.01
9151 13465 4.751600 CCCTTTTTGCAGAGGAATTGTTTC 59.248 41.667 12.83 0.00 34.91 2.78
9152 13466 4.408596 TCCCTTTTTGCAGAGGAATTGTTT 59.591 37.500 12.83 0.00 34.91 2.83
9153 13467 3.966665 TCCCTTTTTGCAGAGGAATTGTT 59.033 39.130 12.83 0.00 34.91 2.83
9154 13468 3.575687 CTCCCTTTTTGCAGAGGAATTGT 59.424 43.478 12.83 0.00 34.91 2.71
9155 13469 3.575687 ACTCCCTTTTTGCAGAGGAATTG 59.424 43.478 12.83 4.56 34.91 2.32
9156 13470 3.829026 GACTCCCTTTTTGCAGAGGAATT 59.171 43.478 12.83 0.00 34.91 2.17
9157 13471 3.181429 TGACTCCCTTTTTGCAGAGGAAT 60.181 43.478 12.83 0.00 34.91 3.01
9158 13472 2.174639 TGACTCCCTTTTTGCAGAGGAA 59.825 45.455 12.83 0.00 34.91 3.36
9159 13473 1.774254 TGACTCCCTTTTTGCAGAGGA 59.226 47.619 12.83 3.86 34.91 3.71
9160 13474 2.157738 CTGACTCCCTTTTTGCAGAGG 58.842 52.381 6.01 6.01 0.00 3.69
9161 13475 2.810852 GTCTGACTCCCTTTTTGCAGAG 59.189 50.000 0.00 0.00 33.55 3.35
9162 13476 2.172505 TGTCTGACTCCCTTTTTGCAGA 59.827 45.455 9.51 0.00 0.00 4.26
9163 13477 2.575532 TGTCTGACTCCCTTTTTGCAG 58.424 47.619 9.51 0.00 0.00 4.41
9164 13478 2.727123 TGTCTGACTCCCTTTTTGCA 57.273 45.000 9.51 0.00 0.00 4.08
9165 13479 2.294512 CCTTGTCTGACTCCCTTTTTGC 59.705 50.000 9.51 0.00 0.00 3.68
9166 13480 3.316308 CACCTTGTCTGACTCCCTTTTTG 59.684 47.826 9.51 0.00 0.00 2.44
9167 13481 3.202151 TCACCTTGTCTGACTCCCTTTTT 59.798 43.478 9.51 0.00 0.00 1.94
9168 13482 2.777692 TCACCTTGTCTGACTCCCTTTT 59.222 45.455 9.51 0.00 0.00 2.27
9169 13483 2.408565 TCACCTTGTCTGACTCCCTTT 58.591 47.619 9.51 0.00 0.00 3.11
9170 13484 2.103153 TCACCTTGTCTGACTCCCTT 57.897 50.000 9.51 0.00 0.00 3.95
9171 13485 2.183679 GATCACCTTGTCTGACTCCCT 58.816 52.381 9.51 0.00 0.00 4.20
9172 13486 1.208293 GGATCACCTTGTCTGACTCCC 59.792 57.143 9.51 0.00 0.00 4.30
9173 13487 1.902508 TGGATCACCTTGTCTGACTCC 59.097 52.381 9.51 6.24 37.04 3.85
9174 13488 3.902881 ATGGATCACCTTGTCTGACTC 57.097 47.619 9.51 0.00 37.04 3.36
9175 13489 5.163258 GGATAATGGATCACCTTGTCTGACT 60.163 44.000 9.51 0.00 36.12 3.41
9176 13490 5.059833 GGATAATGGATCACCTTGTCTGAC 58.940 45.833 0.00 0.00 36.12 3.51
9177 13491 4.103153 GGGATAATGGATCACCTTGTCTGA 59.897 45.833 0.00 0.00 36.12 3.27
9178 13492 4.392940 GGGATAATGGATCACCTTGTCTG 58.607 47.826 0.00 0.00 36.12 3.51
9179 13493 4.713792 GGGATAATGGATCACCTTGTCT 57.286 45.455 0.00 0.00 36.12 3.41
9186 13500 5.824421 AGATCAATGGGGATAATGGATCAC 58.176 41.667 0.00 0.00 37.07 3.06
9187 13501 6.473429 AAGATCAATGGGGATAATGGATCA 57.527 37.500 0.00 0.00 37.07 2.92
9188 13502 6.723052 ACAAAGATCAATGGGGATAATGGATC 59.277 38.462 0.00 0.00 35.50 3.36
9189 13503 6.495872 CACAAAGATCAATGGGGATAATGGAT 59.504 38.462 0.00 0.00 0.00 3.41
9190 13504 5.834742 CACAAAGATCAATGGGGATAATGGA 59.165 40.000 0.00 0.00 0.00 3.41
9191 13505 5.834742 TCACAAAGATCAATGGGGATAATGG 59.165 40.000 0.00 0.00 0.00 3.16
9192 13506 6.964807 TCACAAAGATCAATGGGGATAATG 57.035 37.500 0.00 0.00 0.00 1.90
9193 13507 7.472381 GCAATCACAAAGATCAATGGGGATAAT 60.472 37.037 0.00 0.00 35.39 1.28
9194 13508 6.183360 GCAATCACAAAGATCAATGGGGATAA 60.183 38.462 0.00 0.00 35.39 1.75
9195 13509 5.302568 GCAATCACAAAGATCAATGGGGATA 59.697 40.000 0.00 0.00 35.39 2.59
9196 13510 4.100498 GCAATCACAAAGATCAATGGGGAT 59.900 41.667 0.00 0.00 35.39 3.85
9197 13511 3.448301 GCAATCACAAAGATCAATGGGGA 59.552 43.478 0.00 0.00 35.39 4.81
9198 13512 3.196039 TGCAATCACAAAGATCAATGGGG 59.804 43.478 0.00 0.00 35.39 4.96
9199 13513 4.430007 CTGCAATCACAAAGATCAATGGG 58.570 43.478 0.00 0.00 35.39 4.00
9200 13514 3.863424 GCTGCAATCACAAAGATCAATGG 59.137 43.478 0.00 0.00 35.39 3.16
9201 13515 4.490743 TGCTGCAATCACAAAGATCAATG 58.509 39.130 0.00 0.00 35.39 2.82
9202 13516 4.461431 TCTGCTGCAATCACAAAGATCAAT 59.539 37.500 3.02 0.00 35.39 2.57
9203 13517 3.822167 TCTGCTGCAATCACAAAGATCAA 59.178 39.130 3.02 0.00 35.39 2.57
9204 13518 3.414269 TCTGCTGCAATCACAAAGATCA 58.586 40.909 3.02 0.00 35.39 2.92
9205 13519 4.142447 ACATCTGCTGCAATCACAAAGATC 60.142 41.667 3.02 0.00 35.39 2.75
9206 13520 3.762288 ACATCTGCTGCAATCACAAAGAT 59.238 39.130 3.02 0.00 39.09 2.40
9207 13521 3.151554 ACATCTGCTGCAATCACAAAGA 58.848 40.909 3.02 0.00 0.00 2.52
9208 13522 3.570926 ACATCTGCTGCAATCACAAAG 57.429 42.857 3.02 0.00 0.00 2.77
9209 13523 4.074259 AGTACATCTGCTGCAATCACAAA 58.926 39.130 3.02 0.00 0.00 2.83
9210 13524 3.678289 AGTACATCTGCTGCAATCACAA 58.322 40.909 3.02 0.00 0.00 3.33
9211 13525 3.264947 GAGTACATCTGCTGCAATCACA 58.735 45.455 3.02 0.00 0.00 3.58
9212 13526 2.611292 GGAGTACATCTGCTGCAATCAC 59.389 50.000 3.02 0.00 0.00 3.06
9213 13527 2.236893 TGGAGTACATCTGCTGCAATCA 59.763 45.455 3.02 0.00 35.48 2.57
9214 13528 2.910199 TGGAGTACATCTGCTGCAATC 58.090 47.619 3.02 0.00 35.48 2.67
9215 13529 3.354948 TTGGAGTACATCTGCTGCAAT 57.645 42.857 3.02 0.00 37.96 3.56
9216 13530 2.857186 TTGGAGTACATCTGCTGCAA 57.143 45.000 3.02 0.00 39.97 4.08
9217 13531 2.420547 GGATTGGAGTACATCTGCTGCA 60.421 50.000 0.88 0.88 35.48 4.41
9218 13532 2.216898 GGATTGGAGTACATCTGCTGC 58.783 52.381 0.00 0.00 35.48 5.25
9219 13533 3.548745 TGGATTGGAGTACATCTGCTG 57.451 47.619 0.00 0.00 35.48 4.41
9220 13534 3.746751 GCATGGATTGGAGTACATCTGCT 60.747 47.826 0.00 0.00 35.48 4.24
9221 13535 2.551459 GCATGGATTGGAGTACATCTGC 59.449 50.000 0.00 0.00 35.00 4.26
9222 13536 4.063689 GAGCATGGATTGGAGTACATCTG 58.936 47.826 0.00 0.00 0.00 2.90
9223 13537 3.713248 TGAGCATGGATTGGAGTACATCT 59.287 43.478 0.00 0.00 0.00 2.90
9224 13538 4.077300 TGAGCATGGATTGGAGTACATC 57.923 45.455 0.00 0.00 0.00 3.06
9225 13539 4.508551 TTGAGCATGGATTGGAGTACAT 57.491 40.909 0.00 0.00 0.00 2.29
9226 13540 3.998913 TTGAGCATGGATTGGAGTACA 57.001 42.857 0.00 0.00 0.00 2.90
9227 13541 5.841957 AAATTGAGCATGGATTGGAGTAC 57.158 39.130 0.00 0.00 0.00 2.73
9228 13542 6.855763 AAAAATTGAGCATGGATTGGAGTA 57.144 33.333 0.00 0.00 0.00 2.59
9229 13543 5.750352 AAAAATTGAGCATGGATTGGAGT 57.250 34.783 0.00 0.00 0.00 3.85
9250 13564 3.119424 ACTTTTGCCTCCGTTTCGAAAAA 60.119 39.130 13.10 0.00 0.00 1.94
9251 13565 2.424246 ACTTTTGCCTCCGTTTCGAAAA 59.576 40.909 13.10 0.00 0.00 2.29
9252 13566 2.018515 ACTTTTGCCTCCGTTTCGAAA 58.981 42.857 6.47 6.47 0.00 3.46
9253 13567 1.670791 ACTTTTGCCTCCGTTTCGAA 58.329 45.000 0.00 0.00 0.00 3.71
9254 13568 1.670791 AACTTTTGCCTCCGTTTCGA 58.329 45.000 0.00 0.00 0.00 3.71
9255 13569 2.485266 AAACTTTTGCCTCCGTTTCG 57.515 45.000 0.00 0.00 0.00 3.46
9256 13570 2.284150 GCAAAACTTTTGCCTCCGTTTC 59.716 45.455 23.40 0.00 39.38 2.78
9257 13571 2.276201 GCAAAACTTTTGCCTCCGTTT 58.724 42.857 23.40 0.00 39.38 3.60
9258 13572 1.934589 GCAAAACTTTTGCCTCCGTT 58.065 45.000 23.40 0.00 39.38 4.44
9259 13573 3.659850 GCAAAACTTTTGCCTCCGT 57.340 47.368 23.40 0.00 39.38 4.69
9265 13579 3.011949 TCGATGAGGCAAAACTTTTGC 57.988 42.857 25.11 25.11 44.22 3.68
9266 13580 7.816945 ATTAATCGATGAGGCAAAACTTTTG 57.183 32.000 9.54 9.54 0.00 2.44
9267 13581 9.921637 TTAATTAATCGATGAGGCAAAACTTTT 57.078 25.926 0.00 0.00 0.00 2.27
9268 13582 9.573133 CTTAATTAATCGATGAGGCAAAACTTT 57.427 29.630 0.00 0.00 0.00 2.66
9269 13583 8.956426 TCTTAATTAATCGATGAGGCAAAACTT 58.044 29.630 0.00 0.00 0.00 2.66
9270 13584 8.506168 TCTTAATTAATCGATGAGGCAAAACT 57.494 30.769 0.00 0.00 0.00 2.66
9271 13585 9.226345 CTTCTTAATTAATCGATGAGGCAAAAC 57.774 33.333 0.00 0.00 0.00 2.43
9272 13586 9.173021 TCTTCTTAATTAATCGATGAGGCAAAA 57.827 29.630 0.00 0.00 0.00 2.44
9273 13587 8.731275 TCTTCTTAATTAATCGATGAGGCAAA 57.269 30.769 0.00 0.00 0.00 3.68
9274 13588 8.731275 TTCTTCTTAATTAATCGATGAGGCAA 57.269 30.769 0.00 0.00 0.00 4.52
9275 13589 8.204160 TCTTCTTCTTAATTAATCGATGAGGCA 58.796 33.333 0.00 0.00 0.00 4.75
9276 13590 8.594881 TCTTCTTCTTAATTAATCGATGAGGC 57.405 34.615 0.00 0.00 0.00 4.70
9277 13591 9.973450 TCTCTTCTTCTTAATTAATCGATGAGG 57.027 33.333 19.96 13.97 0.00 3.86
9283 13597 9.657121 GGCAATTCTCTTCTTCTTAATTAATCG 57.343 33.333 0.00 0.00 0.00 3.34
9284 13598 9.958234 GGGCAATTCTCTTCTTCTTAATTAATC 57.042 33.333 0.00 0.00 0.00 1.75
9285 13599 9.479549 TGGGCAATTCTCTTCTTCTTAATTAAT 57.520 29.630 0.00 0.00 0.00 1.40
9286 13600 8.877864 TGGGCAATTCTCTTCTTCTTAATTAA 57.122 30.769 0.00 0.00 0.00 1.40
9287 13601 8.109634 ACTGGGCAATTCTCTTCTTCTTAATTA 58.890 33.333 0.00 0.00 0.00 1.40
9288 13602 6.950619 ACTGGGCAATTCTCTTCTTCTTAATT 59.049 34.615 0.00 0.00 0.00 1.40
9289 13603 6.488715 ACTGGGCAATTCTCTTCTTCTTAAT 58.511 36.000 0.00 0.00 0.00 1.40
9290 13604 5.880901 ACTGGGCAATTCTCTTCTTCTTAA 58.119 37.500 0.00 0.00 0.00 1.85
9291 13605 5.505181 ACTGGGCAATTCTCTTCTTCTTA 57.495 39.130 0.00 0.00 0.00 2.10
9292 13606 4.379302 ACTGGGCAATTCTCTTCTTCTT 57.621 40.909 0.00 0.00 0.00 2.52
9293 13607 4.379302 AACTGGGCAATTCTCTTCTTCT 57.621 40.909 0.00 0.00 0.00 2.85
9294 13608 6.765915 ATTAACTGGGCAATTCTCTTCTTC 57.234 37.500 0.00 0.00 0.00 2.87
9295 13609 8.523658 GTTAATTAACTGGGCAATTCTCTTCTT 58.476 33.333 19.07 0.00 33.52 2.52
9296 13610 7.148239 CGTTAATTAACTGGGCAATTCTCTTCT 60.148 37.037 22.57 0.00 34.12 2.85
9297 13611 6.967199 CGTTAATTAACTGGGCAATTCTCTTC 59.033 38.462 22.57 0.00 34.12 2.87
9298 13612 6.127730 CCGTTAATTAACTGGGCAATTCTCTT 60.128 38.462 22.57 0.00 34.12 2.85
9299 13613 5.357032 CCGTTAATTAACTGGGCAATTCTCT 59.643 40.000 22.57 0.00 34.12 3.10
9300 13614 5.355910 TCCGTTAATTAACTGGGCAATTCTC 59.644 40.000 25.42 2.87 33.65 2.87
9301 13615 5.258051 TCCGTTAATTAACTGGGCAATTCT 58.742 37.500 25.42 0.00 33.65 2.40
9302 13616 5.570234 TCCGTTAATTAACTGGGCAATTC 57.430 39.130 25.42 3.42 33.65 2.17
9303 13617 5.986501 TTCCGTTAATTAACTGGGCAATT 57.013 34.783 25.42 0.00 33.65 2.32
9304 13618 5.986501 TTTCCGTTAATTAACTGGGCAAT 57.013 34.783 25.42 0.00 33.65 3.56
9305 13619 5.509332 GGTTTTCCGTTAATTAACTGGGCAA 60.509 40.000 25.42 19.34 33.65 4.52
9306 13620 4.022155 GGTTTTCCGTTAATTAACTGGGCA 60.022 41.667 25.42 16.39 33.65 5.36
9307 13621 4.022155 TGGTTTTCCGTTAATTAACTGGGC 60.022 41.667 25.42 17.56 44.36 5.36
9308 13622 5.336134 CCTGGTTTTCCGTTAATTAACTGGG 60.336 44.000 25.42 20.06 44.36 4.45
9309 13623 5.705902 CCTGGTTTTCCGTTAATTAACTGG 58.294 41.667 22.57 22.56 44.36 4.00
9310 13624 5.158494 GCCTGGTTTTCCGTTAATTAACTG 58.842 41.667 22.57 17.46 44.36 3.16
9311 13625 4.083164 CGCCTGGTTTTCCGTTAATTAACT 60.083 41.667 22.57 0.00 44.36 2.24
9312 13626 4.083377 TCGCCTGGTTTTCCGTTAATTAAC 60.083 41.667 16.87 16.87 44.36 2.01
9313 13627 4.070716 TCGCCTGGTTTTCCGTTAATTAA 58.929 39.130 0.00 0.00 44.36 1.40
9314 13628 3.672808 TCGCCTGGTTTTCCGTTAATTA 58.327 40.909 0.00 0.00 44.36 1.40
9315 13629 2.506444 TCGCCTGGTTTTCCGTTAATT 58.494 42.857 0.00 0.00 44.36 1.40
9316 13630 2.188062 TCGCCTGGTTTTCCGTTAAT 57.812 45.000 0.00 0.00 44.36 1.40
9317 13631 1.964552 TTCGCCTGGTTTTCCGTTAA 58.035 45.000 0.00 0.00 44.36 2.01
9318 13632 1.964552 TTTCGCCTGGTTTTCCGTTA 58.035 45.000 0.00 0.00 44.36 3.18
9319 13633 1.104630 TTTTCGCCTGGTTTTCCGTT 58.895 45.000 0.00 0.00 44.36 4.44
9320 13634 0.382873 GTTTTCGCCTGGTTTTCCGT 59.617 50.000 0.00 0.00 44.36 4.69
9321 13635 0.318360 GGTTTTCGCCTGGTTTTCCG 60.318 55.000 0.00 0.00 44.36 4.30
9322 13636 0.747852 TGGTTTTCGCCTGGTTTTCC 59.252 50.000 0.00 0.00 41.14 3.13
9323 13637 2.588027 TTGGTTTTCGCCTGGTTTTC 57.412 45.000 0.00 0.00 0.00 2.29
9324 13638 3.385111 TGTATTGGTTTTCGCCTGGTTTT 59.615 39.130 0.00 0.00 0.00 2.43
9325 13639 2.959707 TGTATTGGTTTTCGCCTGGTTT 59.040 40.909 0.00 0.00 0.00 3.27
9326 13640 2.588620 TGTATTGGTTTTCGCCTGGTT 58.411 42.857 0.00 0.00 0.00 3.67
9327 13641 2.279935 TGTATTGGTTTTCGCCTGGT 57.720 45.000 0.00 0.00 0.00 4.00
9328 13642 3.730662 CGATTGTATTGGTTTTCGCCTGG 60.731 47.826 0.00 0.00 0.00 4.45
9329 13643 3.126171 TCGATTGTATTGGTTTTCGCCTG 59.874 43.478 0.00 0.00 0.00 4.85
9330 13644 3.340034 TCGATTGTATTGGTTTTCGCCT 58.660 40.909 0.00 0.00 0.00 5.52
9331 13645 3.750639 TCGATTGTATTGGTTTTCGCC 57.249 42.857 0.00 0.00 0.00 5.54
9332 13646 3.542310 GCTTCGATTGTATTGGTTTTCGC 59.458 43.478 0.00 0.00 0.00 4.70
9333 13647 4.553429 GTGCTTCGATTGTATTGGTTTTCG 59.447 41.667 0.00 0.00 0.00 3.46
9334 13648 5.457140 TGTGCTTCGATTGTATTGGTTTTC 58.543 37.500 0.00 0.00 0.00 2.29
9335 13649 5.446143 TGTGCTTCGATTGTATTGGTTTT 57.554 34.783 0.00 0.00 0.00 2.43
9336 13650 5.643379 ATGTGCTTCGATTGTATTGGTTT 57.357 34.783 0.00 0.00 0.00 3.27
9337 13651 6.542005 TCATATGTGCTTCGATTGTATTGGTT 59.458 34.615 1.90 0.00 0.00 3.67
9338 13652 6.054941 TCATATGTGCTTCGATTGTATTGGT 58.945 36.000 1.90 0.00 0.00 3.67
9339 13653 6.544038 TCATATGTGCTTCGATTGTATTGG 57.456 37.500 1.90 0.00 0.00 3.16
9340 13654 7.633621 AGTTCATATGTGCTTCGATTGTATTG 58.366 34.615 1.90 0.00 0.00 1.90
9341 13655 7.792374 AGTTCATATGTGCTTCGATTGTATT 57.208 32.000 1.90 0.00 0.00 1.89
9342 13656 8.144478 AGTAGTTCATATGTGCTTCGATTGTAT 58.856 33.333 1.90 0.00 0.00 2.29
9343 13657 7.489160 AGTAGTTCATATGTGCTTCGATTGTA 58.511 34.615 1.90 0.00 0.00 2.41
9344 13658 6.341316 AGTAGTTCATATGTGCTTCGATTGT 58.659 36.000 1.90 0.00 0.00 2.71
9345 13659 6.476706 TGAGTAGTTCATATGTGCTTCGATTG 59.523 38.462 1.90 0.00 0.00 2.67
9346 13660 6.477033 GTGAGTAGTTCATATGTGCTTCGATT 59.523 38.462 1.90 0.00 38.29 3.34
9347 13661 5.980116 GTGAGTAGTTCATATGTGCTTCGAT 59.020 40.000 1.90 0.00 38.29 3.59
9348 13662 5.105917 TGTGAGTAGTTCATATGTGCTTCGA 60.106 40.000 1.90 0.00 38.29 3.71
9349 13663 5.004821 GTGTGAGTAGTTCATATGTGCTTCG 59.995 44.000 1.90 0.00 38.29 3.79
9350 13664 5.869344 TGTGTGAGTAGTTCATATGTGCTTC 59.131 40.000 1.90 0.98 38.29 3.86
9351 13665 5.793817 TGTGTGAGTAGTTCATATGTGCTT 58.206 37.500 1.90 0.00 38.29 3.91
9352 13666 5.405935 TGTGTGAGTAGTTCATATGTGCT 57.594 39.130 1.90 4.99 38.29 4.40
9353 13667 5.408299 TGTTGTGTGAGTAGTTCATATGTGC 59.592 40.000 1.90 0.00 38.29 4.57
9354 13668 7.413328 CCATGTTGTGTGAGTAGTTCATATGTG 60.413 40.741 1.90 0.00 38.29 3.21
9355 13669 6.595326 CCATGTTGTGTGAGTAGTTCATATGT 59.405 38.462 1.90 0.00 38.29 2.29
9356 13670 6.818142 TCCATGTTGTGTGAGTAGTTCATATG 59.182 38.462 0.00 0.00 38.29 1.78
9357 13671 6.946340 TCCATGTTGTGTGAGTAGTTCATAT 58.054 36.000 0.00 0.00 38.29 1.78
9358 13672 6.353404 TCCATGTTGTGTGAGTAGTTCATA 57.647 37.500 0.00 0.00 38.29 2.15
9359 13673 5.227569 TCCATGTTGTGTGAGTAGTTCAT 57.772 39.130 0.00 0.00 38.29 2.57
9360 13674 4.681074 TCCATGTTGTGTGAGTAGTTCA 57.319 40.909 0.00 0.00 0.00 3.18
9361 13675 4.213482 GGTTCCATGTTGTGTGAGTAGTTC 59.787 45.833 0.00 0.00 0.00 3.01
9362 13676 4.134563 GGTTCCATGTTGTGTGAGTAGTT 58.865 43.478 0.00 0.00 0.00 2.24
9363 13677 3.496160 GGGTTCCATGTTGTGTGAGTAGT 60.496 47.826 0.00 0.00 0.00 2.73
9364 13678 3.074412 GGGTTCCATGTTGTGTGAGTAG 58.926 50.000 0.00 0.00 0.00 2.57
9365 13679 2.224670 GGGGTTCCATGTTGTGTGAGTA 60.225 50.000 0.00 0.00 0.00 2.59
9366 13680 1.478654 GGGGTTCCATGTTGTGTGAGT 60.479 52.381 0.00 0.00 0.00 3.41
9367 13681 1.247567 GGGGTTCCATGTTGTGTGAG 58.752 55.000 0.00 0.00 0.00 3.51
9368 13682 0.553333 TGGGGTTCCATGTTGTGTGA 59.447 50.000 0.00 0.00 38.32 3.58
9369 13683 0.673437 GTGGGGTTCCATGTTGTGTG 59.327 55.000 0.00 0.00 46.09 3.82
9370 13684 0.260230 TGTGGGGTTCCATGTTGTGT 59.740 50.000 0.00 0.00 46.09 3.72
9371 13685 1.407936 TTGTGGGGTTCCATGTTGTG 58.592 50.000 0.00 0.00 46.09 3.33
9372 13686 1.760029 GTTTGTGGGGTTCCATGTTGT 59.240 47.619 0.00 0.00 46.09 3.32
9373 13687 1.269517 CGTTTGTGGGGTTCCATGTTG 60.270 52.381 0.00 0.00 46.09 3.33
9374 13688 1.036707 CGTTTGTGGGGTTCCATGTT 58.963 50.000 0.00 0.00 46.09 2.71
9375 13689 1.460273 GCGTTTGTGGGGTTCCATGT 61.460 55.000 0.00 0.00 46.09 3.21
9376 13690 1.288752 GCGTTTGTGGGGTTCCATG 59.711 57.895 0.00 0.00 46.09 3.66
9377 13691 1.152652 TGCGTTTGTGGGGTTCCAT 60.153 52.632 0.00 0.00 46.09 3.41
9378 13692 2.122167 GTGCGTTTGTGGGGTTCCA 61.122 57.895 0.00 0.00 41.58 3.53
9379 13693 2.070654 CTGTGCGTTTGTGGGGTTCC 62.071 60.000 0.00 0.00 0.00 3.62
9380 13694 1.098712 TCTGTGCGTTTGTGGGGTTC 61.099 55.000 0.00 0.00 0.00 3.62
9381 13695 0.467290 ATCTGTGCGTTTGTGGGGTT 60.467 50.000 0.00 0.00 0.00 4.11
9382 13696 1.150536 ATCTGTGCGTTTGTGGGGT 59.849 52.632 0.00 0.00 0.00 4.95
9383 13697 1.580942 CATCTGTGCGTTTGTGGGG 59.419 57.895 0.00 0.00 0.00 4.96
9384 13698 1.580942 CCATCTGTGCGTTTGTGGG 59.419 57.895 0.00 0.00 0.00 4.61
9385 13699 1.081242 GCCATCTGTGCGTTTGTGG 60.081 57.895 0.00 0.00 0.00 4.17
9386 13700 1.081242 GGCCATCTGTGCGTTTGTG 60.081 57.895 0.00 0.00 0.00 3.33
9387 13701 2.268076 GGGCCATCTGTGCGTTTGT 61.268 57.895 4.39 0.00 0.00 2.83
9388 13702 2.568090 GGGCCATCTGTGCGTTTG 59.432 61.111 4.39 0.00 0.00 2.93
9389 13703 3.055719 CGGGCCATCTGTGCGTTT 61.056 61.111 4.39 0.00 0.00 3.60
9390 13704 4.329545 ACGGGCCATCTGTGCGTT 62.330 61.111 4.39 0.00 32.83 4.84
9391 13705 4.760047 GACGGGCCATCTGTGCGT 62.760 66.667 4.39 2.05 34.56 5.24
9392 13706 4.758251 TGACGGGCCATCTGTGCG 62.758 66.667 4.39 0.00 34.56 5.34
9393 13707 3.127533 GTGACGGGCCATCTGTGC 61.128 66.667 4.39 0.00 34.56 4.57
9394 13708 2.034879 GTGTGACGGGCCATCTGTG 61.035 63.158 4.39 0.00 34.56 3.66
9395 13709 1.768684 AAGTGTGACGGGCCATCTGT 61.769 55.000 4.39 0.00 37.76 3.41
9396 13710 1.003355 AAGTGTGACGGGCCATCTG 60.003 57.895 4.39 0.00 0.00 2.90
9397 13711 1.003355 CAAGTGTGACGGGCCATCT 60.003 57.895 4.39 0.00 0.00 2.90
9398 13712 2.690778 GCAAGTGTGACGGGCCATC 61.691 63.158 4.39 0.00 0.00 3.51
9399 13713 2.672996 GCAAGTGTGACGGGCCAT 60.673 61.111 4.39 0.00 0.00 4.40
9400 13714 4.947147 GGCAAGTGTGACGGGCCA 62.947 66.667 4.39 0.00 40.38 5.36
9406 13720 3.226346 TGTATACTCGGCAAGTGTGAC 57.774 47.619 4.17 0.00 39.11 3.67
9407 13721 3.006003 TGTTGTATACTCGGCAAGTGTGA 59.994 43.478 4.17 0.00 39.11 3.58
9408 13722 3.322369 TGTTGTATACTCGGCAAGTGTG 58.678 45.455 4.17 0.00 39.11 3.82
9409 13723 3.671008 TGTTGTATACTCGGCAAGTGT 57.329 42.857 4.17 0.00 39.11 3.55
9410 13724 3.555956 GGATGTTGTATACTCGGCAAGTG 59.444 47.826 4.17 0.00 39.11 3.16
9411 13725 3.196901 TGGATGTTGTATACTCGGCAAGT 59.803 43.478 4.17 0.00 42.33 3.16
9412 13726 3.555956 GTGGATGTTGTATACTCGGCAAG 59.444 47.826 4.17 0.00 0.00 4.01
9413 13727 3.055747 TGTGGATGTTGTATACTCGGCAA 60.056 43.478 4.17 0.00 0.00 4.52
9414 13728 2.498078 TGTGGATGTTGTATACTCGGCA 59.502 45.455 4.17 0.00 0.00 5.69
9415 13729 3.173668 TGTGGATGTTGTATACTCGGC 57.826 47.619 4.17 0.00 0.00 5.54
9416 13730 4.331717 GGTTTGTGGATGTTGTATACTCGG 59.668 45.833 4.17 0.00 0.00 4.63
9417 13731 4.331717 GGGTTTGTGGATGTTGTATACTCG 59.668 45.833 4.17 0.00 0.00 4.18
9418 13732 4.638865 GGGGTTTGTGGATGTTGTATACTC 59.361 45.833 4.17 0.00 0.00 2.59
9419 13733 4.595986 GGGGTTTGTGGATGTTGTATACT 58.404 43.478 4.17 0.00 0.00 2.12
9420 13734 3.375922 CGGGGTTTGTGGATGTTGTATAC 59.624 47.826 0.00 0.00 0.00 1.47
9421 13735 3.263681 TCGGGGTTTGTGGATGTTGTATA 59.736 43.478 0.00 0.00 0.00 1.47
9422 13736 2.040545 TCGGGGTTTGTGGATGTTGTAT 59.959 45.455 0.00 0.00 0.00 2.29
9423 13737 1.420514 TCGGGGTTTGTGGATGTTGTA 59.579 47.619 0.00 0.00 0.00 2.41
9424 13738 0.183971 TCGGGGTTTGTGGATGTTGT 59.816 50.000 0.00 0.00 0.00 3.32
9425 13739 0.881118 CTCGGGGTTTGTGGATGTTG 59.119 55.000 0.00 0.00 0.00 3.33
9426 13740 0.251165 CCTCGGGGTTTGTGGATGTT 60.251 55.000 0.00 0.00 0.00 2.71
9427 13741 1.378762 CCTCGGGGTTTGTGGATGT 59.621 57.895 0.00 0.00 0.00 3.06
9428 13742 2.046285 GCCTCGGGGTTTGTGGATG 61.046 63.158 1.62 0.00 34.45 3.51
9429 13743 2.355115 GCCTCGGGGTTTGTGGAT 59.645 61.111 1.62 0.00 34.45 3.41
9430 13744 3.172106 TGCCTCGGGGTTTGTGGA 61.172 61.111 1.62 0.00 34.45 4.02
9431 13745 2.983592 GTGCCTCGGGGTTTGTGG 60.984 66.667 1.62 0.00 34.45 4.17
9432 13746 2.983592 GGTGCCTCGGGGTTTGTG 60.984 66.667 1.62 0.00 34.45 3.33
9433 13747 3.175710 AGGTGCCTCGGGGTTTGT 61.176 61.111 1.62 0.00 34.45 2.83
9434 13748 2.359975 GAGGTGCCTCGGGGTTTG 60.360 66.667 1.62 0.00 33.06 2.93
9435 13749 3.647771 GGAGGTGCCTCGGGGTTT 61.648 66.667 1.62 0.00 43.59 3.27
9439 13753 4.410400 GTTGGGAGGTGCCTCGGG 62.410 72.222 11.66 0.00 43.59 5.14
9440 13754 4.410400 GGTTGGGAGGTGCCTCGG 62.410 72.222 11.66 0.00 43.59 4.63
9441 13755 4.410400 GGGTTGGGAGGTGCCTCG 62.410 72.222 11.66 0.00 43.59 4.63
9442 13756 2.366153 TTTGGGTTGGGAGGTGCCTC 62.366 60.000 9.66 9.66 42.04 4.70
9443 13757 1.955458 TTTTGGGTTGGGAGGTGCCT 61.955 55.000 0.00 0.00 36.66 4.75
9444 13758 1.458588 TTTTGGGTTGGGAGGTGCC 60.459 57.895 0.00 0.00 0.00 5.01
9445 13759 1.745890 GTTTTGGGTTGGGAGGTGC 59.254 57.895 0.00 0.00 0.00 5.01
9446 13760 0.397816 TGGTTTTGGGTTGGGAGGTG 60.398 55.000 0.00 0.00 0.00 4.00
9447 13761 0.397957 GTGGTTTTGGGTTGGGAGGT 60.398 55.000 0.00 0.00 0.00 3.85
9448 13762 0.397816 TGTGGTTTTGGGTTGGGAGG 60.398 55.000 0.00 0.00 0.00 4.30
9449 13763 1.138069 GTTGTGGTTTTGGGTTGGGAG 59.862 52.381 0.00 0.00 0.00 4.30
9450 13764 1.196012 GTTGTGGTTTTGGGTTGGGA 58.804 50.000 0.00 0.00 0.00 4.37
9451 13765 0.179234 GGTTGTGGTTTTGGGTTGGG 59.821 55.000 0.00 0.00 0.00 4.12
9452 13766 0.179234 GGGTTGTGGTTTTGGGTTGG 59.821 55.000 0.00 0.00 0.00 3.77
9453 13767 0.905357 TGGGTTGTGGTTTTGGGTTG 59.095 50.000 0.00 0.00 0.00 3.77
9454 13768 1.657804 TTGGGTTGTGGTTTTGGGTT 58.342 45.000 0.00 0.00 0.00 4.11
9455 13769 3.401032 TTGGGTTGTGGTTTTGGGT 57.599 47.368 0.00 0.00 0.00 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.