Multiple sequence alignment - TraesCS3B01G247600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G247600 chr3B 100.000 4950 0 0 1 4950 393453104 393458053 0.000000e+00 9142.0
1 TraesCS3B01G247600 chr3B 94.681 94 4 1 3046 3139 395909051 395909143 1.440000e-30 145.0
2 TraesCS3B01G247600 chr3B 88.000 75 4 4 1694 1766 279666721 279666650 3.180000e-12 84.2
3 TraesCS3B01G247600 chr3A 96.739 1196 23 4 1868 3047 396294785 396295980 0.000000e+00 1978.0
4 TraesCS3B01G247600 chr3A 97.725 1011 16 2 3166 4169 396296107 396297117 0.000000e+00 1733.0
5 TraesCS3B01G247600 chr3A 93.967 1094 43 10 577 1658 396291788 396292870 0.000000e+00 1633.0
6 TraesCS3B01G247600 chr3A 96.658 778 24 2 4174 4950 396297463 396298239 0.000000e+00 1291.0
7 TraesCS3B01G247600 chr3A 96.444 225 6 1 1654 1876 396293326 396293550 2.180000e-98 370.0
8 TraesCS3B01G247600 chr3D 93.534 1098 44 11 577 1658 298461065 298462151 0.000000e+00 1609.0
9 TraesCS3B01G247600 chr3D 90.937 662 57 3 3517 4177 298463612 298464271 0.000000e+00 887.0
10 TraesCS3B01G247600 chr3D 85.308 844 66 26 2195 3020 298462304 298463107 0.000000e+00 819.0
11 TraesCS3B01G247600 chr3D 94.651 430 14 3 3142 3570 298463118 298463539 0.000000e+00 658.0
12 TraesCS3B01G247600 chr3D 87.033 509 40 12 4176 4678 298464317 298464805 7.240000e-153 551.0
13 TraesCS3B01G247600 chr3D 87.838 74 6 2 1694 1767 587649252 587649322 3.180000e-12 84.2
14 TraesCS3B01G247600 chr3D 86.154 65 7 1 4883 4947 51439504 51439566 8.890000e-08 69.4
15 TraesCS3B01G247600 chr2B 96.233 584 22 0 1 584 30170436 30171019 0.000000e+00 957.0
16 TraesCS3B01G247600 chr2B 95.548 584 26 0 1 584 30183829 30184412 0.000000e+00 935.0
17 TraesCS3B01G247600 chr2B 95.548 584 26 0 1 584 30205352 30205935 0.000000e+00 935.0
18 TraesCS3B01G247600 chr2B 94.863 584 30 0 1 584 30226379 30226962 0.000000e+00 913.0
19 TraesCS3B01G247600 chr2B 88.000 75 4 4 1694 1766 206686519 206686448 3.180000e-12 84.2
20 TraesCS3B01G247600 chrUn 96.062 584 23 0 1 584 178498243 178497660 0.000000e+00 952.0
21 TraesCS3B01G247600 chrUn 96.034 580 23 0 1 580 178515007 178514428 0.000000e+00 944.0
22 TraesCS3B01G247600 chrUn 95.719 584 25 0 1 584 178459251 178458668 0.000000e+00 941.0
23 TraesCS3B01G247600 chrUn 96.078 51 2 0 4897 4947 88110480 88110430 3.180000e-12 84.2
24 TraesCS3B01G247600 chr1D 95.719 584 24 1 1 584 451284890 451284308 0.000000e+00 939.0
25 TraesCS3B01G247600 chr7A 93.836 584 36 0 1 584 194285558 194286141 0.000000e+00 880.0
26 TraesCS3B01G247600 chr7A 95.652 92 4 0 3048 3139 122031723 122031632 1.110000e-31 148.0
27 TraesCS3B01G247600 chr6B 96.739 92 3 0 3048 3139 212164639 212164548 2.390000e-33 154.0
28 TraesCS3B01G247600 chr6B 94.681 94 4 1 3046 3139 55347182 55347274 1.440000e-30 145.0
29 TraesCS3B01G247600 chr6B 97.826 46 1 0 4905 4950 609386041 609385996 4.110000e-11 80.5
30 TraesCS3B01G247600 chr7D 95.652 92 4 0 3048 3139 20074085 20073994 1.110000e-31 148.0
31 TraesCS3B01G247600 chr7D 84.211 114 14 4 1689 1800 422150540 422150651 1.880000e-19 108.0
32 TraesCS3B01G247600 chr7D 92.537 67 3 2 1694 1758 635570069 635570003 1.470000e-15 95.3
33 TraesCS3B01G247600 chr7D 97.674 43 1 0 4907 4949 627409052 627409010 1.910000e-09 75.0
34 TraesCS3B01G247600 chr5B 95.652 92 4 0 3048 3139 659593673 659593764 1.110000e-31 148.0
35 TraesCS3B01G247600 chr5B 90.909 55 4 1 4893 4947 55371866 55371919 6.870000e-09 73.1
36 TraesCS3B01G247600 chr2A 94.737 95 5 0 3048 3142 673554287 673554193 1.110000e-31 148.0
37 TraesCS3B01G247600 chr5D 94.681 94 4 1 3046 3139 269732099 269732191 1.440000e-30 145.0
38 TraesCS3B01G247600 chr5D 89.216 102 7 1 3366 3463 68972776 68972877 1.870000e-24 124.0
39 TraesCS3B01G247600 chr5D 90.909 55 4 1 4893 4947 52281983 52282036 6.870000e-09 73.1
40 TraesCS3B01G247600 chr6D 91.176 102 5 1 3366 3463 425003924 425004025 8.640000e-28 135.0
41 TraesCS3B01G247600 chr1B 89.189 111 9 3 3046 3155 612936990 612937098 8.640000e-28 135.0
42 TraesCS3B01G247600 chr1A 90.196 102 6 1 3366 3463 558757340 558757239 4.020000e-26 130.0
43 TraesCS3B01G247600 chr1A 91.176 68 2 3 1694 1760 313745532 313745596 6.820000e-14 89.8
44 TraesCS3B01G247600 chr1A 87.931 58 5 1 4892 4947 137852027 137852084 3.200000e-07 67.6
45 TraesCS3B01G247600 chr5A 89.333 75 3 4 1694 1766 402121623 402121694 6.820000e-14 89.8
46 TraesCS3B01G247600 chr7B 88.312 77 2 5 1694 1766 328496281 328496354 8.830000e-13 86.1
47 TraesCS3B01G247600 chr4D 97.727 44 1 0 4907 4950 499678143 499678186 5.310000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G247600 chr3B 393453104 393458053 4949 False 9142.0 9142 100.0000 1 4950 1 chr3B.!!$F1 4949
1 TraesCS3B01G247600 chr3A 396291788 396298239 6451 False 1401.0 1978 96.3066 577 4950 5 chr3A.!!$F1 4373
2 TraesCS3B01G247600 chr3D 298461065 298464805 3740 False 904.8 1609 90.2926 577 4678 5 chr3D.!!$F3 4101
3 TraesCS3B01G247600 chr2B 30170436 30171019 583 False 957.0 957 96.2330 1 584 1 chr2B.!!$F1 583
4 TraesCS3B01G247600 chr2B 30183829 30184412 583 False 935.0 935 95.5480 1 584 1 chr2B.!!$F2 583
5 TraesCS3B01G247600 chr2B 30205352 30205935 583 False 935.0 935 95.5480 1 584 1 chr2B.!!$F3 583
6 TraesCS3B01G247600 chr2B 30226379 30226962 583 False 913.0 913 94.8630 1 584 1 chr2B.!!$F4 583
7 TraesCS3B01G247600 chrUn 178497660 178498243 583 True 952.0 952 96.0620 1 584 1 chrUn.!!$R3 583
8 TraesCS3B01G247600 chrUn 178514428 178515007 579 True 944.0 944 96.0340 1 580 1 chrUn.!!$R4 579
9 TraesCS3B01G247600 chrUn 178458668 178459251 583 True 941.0 941 95.7190 1 584 1 chrUn.!!$R2 583
10 TraesCS3B01G247600 chr1D 451284308 451284890 582 True 939.0 939 95.7190 1 584 1 chr1D.!!$R1 583
11 TraesCS3B01G247600 chr7A 194285558 194286141 583 False 880.0 880 93.8360 1 584 1 chr7A.!!$F1 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
360 361 0.033796 ACGGACCCAGATCGGAACTA 60.034 55.000 5.32 0.0 36.56 2.24 F
1839 2329 0.464452 CTACTCCCGATCAACCCACC 59.536 60.000 0.00 0.0 0.00 4.61 F
2030 3772 0.541863 AGTCCTTGCCCGGTCTTATG 59.458 55.000 0.00 0.0 0.00 1.90 F
2715 4458 2.330216 AGAAGCCGCCTGAACCTATAT 58.670 47.619 0.00 0.0 0.00 0.86 F
3067 4827 0.318360 CGGTTTTCGCCTGGTTTTCC 60.318 55.000 0.00 0.0 41.14 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1931 3667 0.667792 GAGCTTCACCGTCACTCCAC 60.668 60.000 0.0 0.0 0.00 4.02 R
3048 4808 0.318360 GGAAAACCAGGCGAAAACCG 60.318 55.000 0.0 0.0 42.21 4.44 R
3050 4810 0.382873 ACGGAAAACCAGGCGAAAAC 59.617 50.000 0.0 0.0 0.00 2.43 R
3889 5885 1.303643 CAAGTCAAGGTCCTGGGGC 60.304 63.158 0.0 0.0 0.00 5.80 R
4679 7022 2.165641 GGACCTTTGAAATAAAGCCCCG 59.834 50.000 0.0 0.0 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.168714 GCACCTCAACCCTTCATCAC 58.831 55.000 0.00 0.00 0.00 3.06
179 180 3.949113 GGTCCTTGCCGATGGTAATTTTA 59.051 43.478 0.00 0.00 0.00 1.52
190 191 4.919774 TGGTAATTTTAGTCTGGAGCCA 57.080 40.909 0.00 0.00 0.00 4.75
240 241 1.004918 AAGAACTCGCGAACCCTGG 60.005 57.895 11.33 0.00 0.00 4.45
255 256 1.222936 CTGGTCCCATCAGCCTCAC 59.777 63.158 0.00 0.00 0.00 3.51
322 323 4.122776 CCATACGCAATAGTCTGCTTTCT 58.877 43.478 0.00 0.00 40.33 2.52
360 361 0.033796 ACGGACCCAGATCGGAACTA 60.034 55.000 5.32 0.00 36.56 2.24
370 371 6.099845 ACCCAGATCGGAACTAAATTCAGTAT 59.900 38.462 5.32 0.00 39.30 2.12
377 378 5.629849 CGGAACTAAATTCAGTATAGCCTCG 59.370 44.000 0.00 0.00 39.30 4.63
423 424 1.537990 GGCCAACAATGAGTGCGTTTT 60.538 47.619 0.00 0.00 0.00 2.43
529 530 1.068127 CCTTGCAATATTGAGGCCTGC 59.932 52.381 19.73 7.04 0.00 4.85
571 572 2.132762 GAAGTGTTCCGTCATGTCGTT 58.867 47.619 11.29 0.00 0.00 3.85
590 591 3.285745 GTTGACGTTTGTCCGAACATTC 58.714 45.455 0.00 0.00 44.86 2.67
606 607 5.106869 CGAACATTCCTAATGGACAAACGAA 60.107 40.000 4.78 0.00 43.06 3.85
611 612 5.477607 TCCTAATGGACAAACGAAGAAGA 57.522 39.130 0.00 0.00 37.46 2.87
619 620 3.875134 GACAAACGAAGAAGAACCCTTGA 59.125 43.478 0.00 0.00 31.62 3.02
646 647 4.914177 CCCTAACTTTTACCAGGGTACA 57.086 45.455 0.00 0.00 42.50 2.90
647 648 4.840271 CCCTAACTTTTACCAGGGTACAG 58.160 47.826 0.00 0.44 42.50 2.74
719 721 9.807649 AAAACGTAGAATGTATTACTCCGTATT 57.192 29.630 0.00 0.00 0.00 1.89
736 738 7.931407 ACTCCGTATTTGATTATGTGAAGCATA 59.069 33.333 0.00 0.00 38.94 3.14
752 754 1.949465 CATAGAACGCCAACCCCTAC 58.051 55.000 0.00 0.00 0.00 3.18
837 844 2.416296 CGCCAAATCTGGTAGTACGACA 60.416 50.000 8.44 0.00 45.53 4.35
877 884 2.967946 CGTCTCCCTCCCAAACCCC 61.968 68.421 0.00 0.00 0.00 4.95
890 897 2.110578 CAAACCCCAATCATTCCCTCC 58.889 52.381 0.00 0.00 0.00 4.30
901 908 1.051556 ATTCCCTCCTCCGCCTTCTC 61.052 60.000 0.00 0.00 0.00 2.87
909 916 1.538419 CCTCCGCCTTCTCCGAAATAC 60.538 57.143 0.00 0.00 0.00 1.89
910 917 1.409427 CTCCGCCTTCTCCGAAATACT 59.591 52.381 0.00 0.00 0.00 2.12
911 918 1.407979 TCCGCCTTCTCCGAAATACTC 59.592 52.381 0.00 0.00 0.00 2.59
912 919 1.538419 CCGCCTTCTCCGAAATACTCC 60.538 57.143 0.00 0.00 0.00 3.85
913 920 1.136305 CGCCTTCTCCGAAATACTCCA 59.864 52.381 0.00 0.00 0.00 3.86
914 921 2.418197 CGCCTTCTCCGAAATACTCCAA 60.418 50.000 0.00 0.00 0.00 3.53
915 922 3.606687 GCCTTCTCCGAAATACTCCAAA 58.393 45.455 0.00 0.00 0.00 3.28
1475 1503 5.732247 GCTGTGAAAGGTAACGTGTTCATTT 60.732 40.000 0.00 0.00 46.39 2.32
1658 1686 2.679837 AGCTGAGGTATCGCAATGTTTG 59.320 45.455 0.00 0.00 0.00 2.93
1671 2159 8.621532 ATCGCAATGTTTGGACATATAATAGT 57.378 30.769 0.00 0.00 45.58 2.12
1685 2173 8.392631 ACATATAATAGTGCCTTATGGGATCA 57.607 34.615 0.00 0.00 35.69 2.92
1693 2181 2.243221 GCCTTATGGGATCATAGGCCAT 59.757 50.000 5.01 8.13 40.38 4.40
1830 2320 3.111741 AGTGGGTTAACTACTCCCGAT 57.888 47.619 5.42 0.00 43.75 4.18
1839 2329 0.464452 CTACTCCCGATCAACCCACC 59.536 60.000 0.00 0.00 0.00 4.61
1920 3656 0.755686 CCTCCCTTCCAAGATCCTCG 59.244 60.000 0.00 0.00 0.00 4.63
1926 3662 2.419297 CCTTCCAAGATCCTCGTTCCTG 60.419 54.545 0.00 0.00 0.00 3.86
1931 3667 1.066587 GATCCTCGTTCCTGCTCCG 59.933 63.158 0.00 0.00 0.00 4.63
1932 3668 1.668101 GATCCTCGTTCCTGCTCCGT 61.668 60.000 0.00 0.00 0.00 4.69
1992 3734 4.160439 TCCTGTGCTTCCATAACTAGACAG 59.840 45.833 0.00 0.00 0.00 3.51
2023 3765 2.058675 CCCTATAGTCCTTGCCCGG 58.941 63.158 0.00 0.00 0.00 5.73
2030 3772 0.541863 AGTCCTTGCCCGGTCTTATG 59.458 55.000 0.00 0.00 0.00 1.90
2121 3863 4.536765 TCTTCCCCTGCCTTTTTGATATC 58.463 43.478 0.00 0.00 0.00 1.63
2535 4277 4.929211 GCATCGGTCCTTTGCTTTTAATTT 59.071 37.500 5.82 0.00 33.61 1.82
2612 4355 2.719979 GCGCATGGCATTCTCAGG 59.280 61.111 0.30 0.00 42.87 3.86
2640 4383 7.939784 AAGAAACAAGAGGTAGAAAAACTGT 57.060 32.000 0.00 0.00 0.00 3.55
2715 4458 2.330216 AGAAGCCGCCTGAACCTATAT 58.670 47.619 0.00 0.00 0.00 0.86
2732 4475 6.064717 ACCTATATTTCTTGATGAGCCAACC 58.935 40.000 0.00 0.00 0.00 3.77
2766 4515 8.684520 AGAAATCCAAAGAAAAGATCTGCATAG 58.315 33.333 0.00 0.00 38.79 2.23
2818 4567 3.792401 TCCGTGTATGCAAGGTATGAAG 58.208 45.455 14.81 0.00 43.38 3.02
2887 4636 7.175467 TCTGACTGACAGTTGCAATAATTTGAT 59.825 33.333 10.01 0.00 45.86 2.57
3038 4798 6.709281 TGACATTTTGCCATCCATTAAACAT 58.291 32.000 0.00 0.00 0.00 2.71
3039 4799 7.166851 TGACATTTTGCCATCCATTAAACATT 58.833 30.769 0.00 0.00 0.00 2.71
3040 4800 8.316946 TGACATTTTGCCATCCATTAAACATTA 58.683 29.630 0.00 0.00 0.00 1.90
3041 4801 8.491331 ACATTTTGCCATCCATTAAACATTAC 57.509 30.769 0.00 0.00 0.00 1.89
3042 4802 7.552330 ACATTTTGCCATCCATTAAACATTACC 59.448 33.333 0.00 0.00 0.00 2.85
3043 4803 4.909696 TGCCATCCATTAAACATTACCG 57.090 40.909 0.00 0.00 0.00 4.02
3044 4804 3.067461 TGCCATCCATTAAACATTACCGC 59.933 43.478 0.00 0.00 0.00 5.68
3045 4805 3.067461 GCCATCCATTAAACATTACCGCA 59.933 43.478 0.00 0.00 0.00 5.69
3046 4806 4.261994 GCCATCCATTAAACATTACCGCAT 60.262 41.667 0.00 0.00 0.00 4.73
3047 4807 5.738783 GCCATCCATTAAACATTACCGCATT 60.739 40.000 0.00 0.00 0.00 3.56
3048 4808 5.920273 CCATCCATTAAACATTACCGCATTC 59.080 40.000 0.00 0.00 0.00 2.67
3049 4809 5.163302 TCCATTAAACATTACCGCATTCG 57.837 39.130 0.00 0.00 0.00 3.34
3059 4819 2.867472 CGCATTCGGTTTTCGCCT 59.133 55.556 0.00 0.00 39.05 5.52
3060 4820 1.511887 CGCATTCGGTTTTCGCCTG 60.512 57.895 0.00 0.00 39.05 4.85
3061 4821 1.154035 GCATTCGGTTTTCGCCTGG 60.154 57.895 0.00 0.00 39.05 4.45
3062 4822 1.862602 GCATTCGGTTTTCGCCTGGT 61.863 55.000 0.00 0.00 39.05 4.00
3063 4823 0.596082 CATTCGGTTTTCGCCTGGTT 59.404 50.000 0.00 0.00 39.05 3.67
3064 4824 1.000717 CATTCGGTTTTCGCCTGGTTT 60.001 47.619 0.00 0.00 39.05 3.27
3065 4825 1.104630 TTCGGTTTTCGCCTGGTTTT 58.895 45.000 0.00 0.00 39.05 2.43
3066 4826 0.664224 TCGGTTTTCGCCTGGTTTTC 59.336 50.000 0.00 0.00 39.05 2.29
3067 4827 0.318360 CGGTTTTCGCCTGGTTTTCC 60.318 55.000 0.00 0.00 41.14 3.13
3068 4828 0.318360 GGTTTTCGCCTGGTTTTCCG 60.318 55.000 0.00 0.00 44.36 4.30
3069 4829 0.382873 GTTTTCGCCTGGTTTTCCGT 59.617 50.000 0.00 0.00 44.36 4.69
3070 4830 1.104630 TTTTCGCCTGGTTTTCCGTT 58.895 45.000 0.00 0.00 44.36 4.44
3071 4831 1.964552 TTTCGCCTGGTTTTCCGTTA 58.035 45.000 0.00 0.00 44.36 3.18
3072 4832 1.964552 TTCGCCTGGTTTTCCGTTAA 58.035 45.000 0.00 0.00 44.36 2.01
3073 4833 2.188062 TCGCCTGGTTTTCCGTTAAT 57.812 45.000 0.00 0.00 44.36 1.40
3074 4834 2.506444 TCGCCTGGTTTTCCGTTAATT 58.494 42.857 0.00 0.00 44.36 1.40
3075 4835 3.672808 TCGCCTGGTTTTCCGTTAATTA 58.327 40.909 0.00 0.00 44.36 1.40
3076 4836 4.070716 TCGCCTGGTTTTCCGTTAATTAA 58.929 39.130 0.00 0.00 44.36 1.40
3077 4837 4.083377 TCGCCTGGTTTTCCGTTAATTAAC 60.083 41.667 16.87 16.87 44.36 2.01
3078 4838 4.487948 GCCTGGTTTTCCGTTAATTAACC 58.512 43.478 20.08 9.46 44.36 2.85
3079 4839 4.725359 CCTGGTTTTCCGTTAATTAACCG 58.275 43.478 20.08 14.72 44.36 4.44
3080 4840 4.379708 CCTGGTTTTCCGTTAATTAACCGG 60.380 45.833 20.08 21.52 44.36 5.28
3081 4841 3.505293 TGGTTTTCCGTTAATTAACCGGG 59.495 43.478 25.42 20.06 44.36 5.73
3082 4842 3.500982 GTTTTCCGTTAATTAACCGGGC 58.499 45.455 25.42 15.89 33.65 6.13
3083 4843 2.486472 TTCCGTTAATTAACCGGGCA 57.514 45.000 25.42 16.39 33.65 5.36
3084 4844 2.486472 TCCGTTAATTAACCGGGCAA 57.514 45.000 25.42 13.08 33.65 4.52
3085 4845 3.002038 TCCGTTAATTAACCGGGCAAT 57.998 42.857 25.42 0.96 33.65 3.56
3086 4846 3.354467 TCCGTTAATTAACCGGGCAATT 58.646 40.909 25.42 16.74 33.65 2.32
3087 4847 3.377798 TCCGTTAATTAACCGGGCAATTC 59.622 43.478 25.42 5.57 33.65 2.17
3088 4848 3.379057 CCGTTAATTAACCGGGCAATTCT 59.621 43.478 20.08 0.59 32.69 2.40
3089 4849 4.496840 CCGTTAATTAACCGGGCAATTCTC 60.497 45.833 20.08 10.91 32.69 2.87
3090 4850 4.334481 CGTTAATTAACCGGGCAATTCTCT 59.666 41.667 20.08 0.00 32.69 3.10
3091 4851 5.163693 CGTTAATTAACCGGGCAATTCTCTT 60.164 40.000 20.08 0.00 32.69 2.85
3092 4852 4.983671 AATTAACCGGGCAATTCTCTTC 57.016 40.909 6.32 0.00 0.00 2.87
3093 4853 3.713826 TTAACCGGGCAATTCTCTTCT 57.286 42.857 6.32 0.00 0.00 2.85
3094 4854 2.586648 AACCGGGCAATTCTCTTCTT 57.413 45.000 6.32 0.00 0.00 2.52
3095 4855 2.115343 ACCGGGCAATTCTCTTCTTC 57.885 50.000 6.32 0.00 0.00 2.87
3096 4856 1.630878 ACCGGGCAATTCTCTTCTTCT 59.369 47.619 6.32 0.00 0.00 2.85
3097 4857 2.040412 ACCGGGCAATTCTCTTCTTCTT 59.960 45.455 6.32 0.00 0.00 2.52
3098 4858 3.263425 ACCGGGCAATTCTCTTCTTCTTA 59.737 43.478 6.32 0.00 0.00 2.10
3099 4859 4.261801 CCGGGCAATTCTCTTCTTCTTAA 58.738 43.478 0.00 0.00 0.00 1.85
3100 4860 4.884164 CCGGGCAATTCTCTTCTTCTTAAT 59.116 41.667 0.00 0.00 0.00 1.40
3101 4861 5.358160 CCGGGCAATTCTCTTCTTCTTAATT 59.642 40.000 0.00 0.00 0.00 1.40
3102 4862 6.542370 CCGGGCAATTCTCTTCTTCTTAATTA 59.458 38.462 0.00 0.00 0.00 1.40
3103 4863 7.067008 CCGGGCAATTCTCTTCTTCTTAATTAA 59.933 37.037 0.00 0.00 0.00 1.40
3104 4864 8.624776 CGGGCAATTCTCTTCTTCTTAATTAAT 58.375 33.333 0.00 0.00 0.00 1.40
3105 4865 9.958234 GGGCAATTCTCTTCTTCTTAATTAATC 57.042 33.333 0.00 0.00 0.00 1.75
3106 4866 9.657121 GGCAATTCTCTTCTTCTTAATTAATCG 57.343 33.333 0.00 0.00 0.00 3.34
3111 4871 9.547753 TTCTCTTCTTCTTAATTAATCGATGGG 57.452 33.333 0.00 0.00 0.00 4.00
3112 4872 8.150945 TCTCTTCTTCTTAATTAATCGATGGGG 58.849 37.037 0.00 0.00 0.00 4.96
3113 4873 6.710744 TCTTCTTCTTAATTAATCGATGGGGC 59.289 38.462 0.00 0.00 0.00 5.80
3114 4874 5.935945 TCTTCTTAATTAATCGATGGGGCA 58.064 37.500 0.00 0.00 0.00 5.36
3115 4875 6.361433 TCTTCTTAATTAATCGATGGGGCAA 58.639 36.000 0.00 0.00 0.00 4.52
3116 4876 6.831353 TCTTCTTAATTAATCGATGGGGCAAA 59.169 34.615 0.00 0.00 0.00 3.68
3117 4877 7.505585 TCTTCTTAATTAATCGATGGGGCAAAT 59.494 33.333 0.00 0.00 0.00 2.32
3118 4878 7.214467 TCTTAATTAATCGATGGGGCAAATC 57.786 36.000 0.00 0.00 0.00 2.17
3119 4879 7.004086 TCTTAATTAATCGATGGGGCAAATCT 58.996 34.615 0.00 0.00 0.00 2.40
3120 4880 7.505585 TCTTAATTAATCGATGGGGCAAATCTT 59.494 33.333 0.00 0.00 0.00 2.40
3121 4881 6.484364 AATTAATCGATGGGGCAAATCTTT 57.516 33.333 0.00 0.00 0.00 2.52
3122 4882 5.930837 TTAATCGATGGGGCAAATCTTTT 57.069 34.783 0.00 0.00 0.00 2.27
3123 4883 3.806625 ATCGATGGGGCAAATCTTTTG 57.193 42.857 0.00 0.00 0.00 2.44
3124 4884 1.204467 TCGATGGGGCAAATCTTTTGC 59.796 47.619 14.88 14.88 44.22 3.68
3131 4891 2.438868 GCAAATCTTTTGCCTCCGTT 57.561 45.000 12.74 0.00 39.38 4.44
3132 4892 2.754472 GCAAATCTTTTGCCTCCGTTT 58.246 42.857 12.74 0.00 39.38 3.60
3133 4893 2.731451 GCAAATCTTTTGCCTCCGTTTC 59.269 45.455 12.74 0.00 39.38 2.78
3134 4894 2.979813 CAAATCTTTTGCCTCCGTTTCG 59.020 45.455 0.00 0.00 0.00 3.46
3164 4924 9.921637 ACATTACCACATGTAAATTTAAACCAG 57.078 29.630 0.00 0.00 42.51 4.00
3470 5341 6.127394 TGCAGTTCCGTGTATACAAGGTATAA 60.127 38.462 29.48 18.10 44.30 0.98
3610 5600 5.393461 GGCCTAACTGGATTCATTTTGACAG 60.393 44.000 0.00 0.00 38.35 3.51
3721 5717 3.057596 TCAACATTTCGCTCCATTCAACC 60.058 43.478 0.00 0.00 0.00 3.77
3889 5885 5.574055 TGACAAAATAAACTCGGCTAGTACG 59.426 40.000 0.00 3.05 37.50 3.67
3966 5962 1.273986 TGATGGCTAGGAGCTTGGCA 61.274 55.000 8.19 8.19 43.99 4.92
4042 6038 2.167487 GGTTGACCTGTTTTCCTTTGCA 59.833 45.455 0.00 0.00 0.00 4.08
4157 6153 6.150809 TGCAATTGTATGTAGAACATGCTTCA 59.849 34.615 7.40 0.00 41.03 3.02
4169 6165 1.404391 CATGCTTCATTCCAGCCTGTC 59.596 52.381 0.00 0.00 36.33 3.51
4551 6893 6.128472 GCTCATTTTAATGAAAAACAGCAGGG 60.128 38.462 13.49 0.00 44.20 4.45
4679 7022 0.375106 GCTTATCAACTGCGGTCTGC 59.625 55.000 0.00 0.00 46.70 4.26
4698 7041 1.548719 GCGGGGCTTTATTTCAAAGGT 59.451 47.619 0.00 0.00 0.00 3.50
4704 7047 5.661312 GGGGCTTTATTTCAAAGGTCCTTAT 59.339 40.000 4.04 0.00 31.26 1.73
4799 7142 5.079643 AGTTCTGTTTGGGCAGATATGTTT 58.920 37.500 0.00 0.00 43.99 2.83
4810 7153 3.881688 GCAGATATGTTTCCAGCATGAGT 59.118 43.478 0.00 0.00 39.69 3.41
4837 7180 9.688592 GAGAATGAACATTTCAGAAAAGATGTT 57.311 29.630 11.52 11.52 43.98 2.71
4918 7261 4.776308 ACCCTCCGTAAAGTGATCTAAACT 59.224 41.667 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.100631 GTGTTCCGACCCGAGCATG 61.101 63.158 0.00 0.00 0.00 4.06
240 241 0.179034 GATGGTGAGGCTGATGGGAC 60.179 60.000 0.00 0.00 0.00 4.46
255 256 1.146930 CCGTCATGGAGGTGGATGG 59.853 63.158 0.00 0.00 42.00 3.51
279 280 2.589014 CGAATTTCTTGCAGGCTTGTC 58.411 47.619 0.00 0.00 0.00 3.18
322 323 2.668001 CGTGTATACAACGTTCCGTGGA 60.668 50.000 7.25 0.00 39.99 4.02
360 361 4.962155 CCTTCCGAGGCTATACTGAATTT 58.038 43.478 0.00 0.00 35.94 1.82
529 530 0.733729 CGAGGTCTGGAAGGTACGAG 59.266 60.000 0.00 0.00 0.00 4.18
571 572 1.868498 GGAATGTTCGGACAAACGTCA 59.132 47.619 0.00 0.00 39.66 4.35
590 591 5.106673 GGTTCTTCTTCGTTTGTCCATTAGG 60.107 44.000 0.00 0.00 0.00 2.69
606 607 1.202940 GGCACCTTCAAGGGTTCTTCT 60.203 52.381 8.75 0.00 40.58 2.85
646 647 3.183793 AGTTTTACCACGGTTTCGACT 57.816 42.857 0.00 0.00 40.11 4.18
647 648 3.950087 AAGTTTTACCACGGTTTCGAC 57.050 42.857 0.00 0.00 40.11 4.20
690 691 8.677300 ACGGAGTAATACATTCTACGTTTTCTA 58.323 33.333 0.00 0.00 44.75 2.10
692 693 7.746526 ACGGAGTAATACATTCTACGTTTTC 57.253 36.000 0.00 0.00 44.75 2.29
719 721 5.007626 GGCGTTCTATGCTTCACATAATCAA 59.992 40.000 0.00 0.00 40.75 2.57
727 729 1.130561 GGTTGGCGTTCTATGCTTCAC 59.869 52.381 0.00 0.00 0.00 3.18
736 738 1.885163 CTCGTAGGGGTTGGCGTTCT 61.885 60.000 0.00 0.00 0.00 3.01
752 754 4.011023 TCTTAGGAGAAGTGGAGAACTCG 58.989 47.826 0.00 0.00 38.56 4.18
861 868 0.479589 ATTGGGGTTTGGGAGGGAGA 60.480 55.000 0.00 0.00 0.00 3.71
877 884 0.536006 GGCGGAGGAGGGAATGATTG 60.536 60.000 0.00 0.00 0.00 2.67
890 897 1.409427 AGTATTTCGGAGAAGGCGGAG 59.591 52.381 0.00 0.00 45.90 4.63
901 908 2.785562 TGGTGGTTTGGAGTATTTCGG 58.214 47.619 0.00 0.00 0.00 4.30
909 916 3.727726 GGTTTGATTTGGTGGTTTGGAG 58.272 45.455 0.00 0.00 0.00 3.86
910 917 2.101582 CGGTTTGATTTGGTGGTTTGGA 59.898 45.455 0.00 0.00 0.00 3.53
911 918 2.101582 TCGGTTTGATTTGGTGGTTTGG 59.898 45.455 0.00 0.00 0.00 3.28
912 919 3.067461 TCTCGGTTTGATTTGGTGGTTTG 59.933 43.478 0.00 0.00 0.00 2.93
913 920 3.292460 TCTCGGTTTGATTTGGTGGTTT 58.708 40.909 0.00 0.00 0.00 3.27
914 921 2.884639 CTCTCGGTTTGATTTGGTGGTT 59.115 45.455 0.00 0.00 0.00 3.67
915 922 2.504367 CTCTCGGTTTGATTTGGTGGT 58.496 47.619 0.00 0.00 0.00 4.16
1264 1273 2.019807 ACTTCCACGGAAACCCTAGA 57.980 50.000 0.00 0.00 33.34 2.43
1475 1503 1.288752 TGCAAGACACGCAGATCGA 59.711 52.632 0.00 0.00 41.67 3.59
1597 1625 3.264947 TGCATACTTCAGTGCTAAGCAG 58.735 45.455 0.00 0.00 40.08 4.24
1658 1686 7.195374 TCCCATAAGGCACTATTATATGTCC 57.805 40.000 0.00 0.00 38.49 4.02
1671 2159 1.635487 GGCCTATGATCCCATAAGGCA 59.365 52.381 13.21 0.00 43.52 4.75
1700 2188 3.244670 GCATGCTTGTGCGTATTAGAG 57.755 47.619 11.37 0.00 43.34 2.43
1830 2320 1.521906 CGTTGACACGGTGGGTTGA 60.522 57.895 13.48 0.00 43.16 3.18
1920 3656 1.374758 CACTCCACGGAGCAGGAAC 60.375 63.158 13.16 0.00 45.54 3.62
1931 3667 0.667792 GAGCTTCACCGTCACTCCAC 60.668 60.000 0.00 0.00 0.00 4.02
1932 3668 1.666011 GAGCTTCACCGTCACTCCA 59.334 57.895 0.00 0.00 0.00 3.86
1992 3734 3.770388 GACTATAGGGCCATCTTAGTCCC 59.230 52.174 21.32 6.38 35.05 4.46
2023 3765 6.280855 ACTGGGTTTAATTTGGCATAAGAC 57.719 37.500 0.00 0.00 0.00 3.01
2030 3772 6.593770 CCTATTCAAACTGGGTTTAATTTGGC 59.406 38.462 0.00 0.00 33.70 4.52
2121 3863 4.010349 GGTGAAACTGAACTAGAATGGGG 58.990 47.826 0.00 0.00 36.74 4.96
2303 4045 2.614057 GTTCTTACAGATGCGGGAATGG 59.386 50.000 0.00 0.00 0.00 3.16
2640 4383 5.988310 ACCTTTTCAAATGCATCATCAGA 57.012 34.783 0.00 0.00 0.00 3.27
2715 4458 2.559698 TCGGTTGGCTCATCAAGAAA 57.440 45.000 0.00 0.00 0.00 2.52
2732 4475 7.810658 TCTTTTCTTTGGATTTCTCTGATTCG 58.189 34.615 0.00 0.00 0.00 3.34
2766 4515 3.154827 TCCATCCTTTTCCTGAACCAC 57.845 47.619 0.00 0.00 0.00 4.16
2818 4567 4.331168 GCAGAGTAACATCACCATGAGAAC 59.669 45.833 0.00 0.00 33.72 3.01
2887 4636 9.997482 GTCAAACTTAATCTAAACTTGAACACA 57.003 29.630 0.00 0.00 0.00 3.72
3042 4802 1.511887 CAGGCGAAAACCGAATGCG 60.512 57.895 0.00 0.00 41.76 4.73
3043 4803 1.154035 CCAGGCGAAAACCGAATGC 60.154 57.895 0.00 0.00 41.76 3.56
3044 4804 0.596082 AACCAGGCGAAAACCGAATG 59.404 50.000 0.00 0.00 41.76 2.67
3045 4805 1.324383 AAACCAGGCGAAAACCGAAT 58.676 45.000 0.00 0.00 41.76 3.34
3046 4806 1.065851 GAAAACCAGGCGAAAACCGAA 59.934 47.619 0.00 0.00 41.76 4.30
3047 4807 0.664224 GAAAACCAGGCGAAAACCGA 59.336 50.000 0.00 0.00 41.76 4.69
3048 4808 0.318360 GGAAAACCAGGCGAAAACCG 60.318 55.000 0.00 0.00 42.21 4.44
3049 4809 0.318360 CGGAAAACCAGGCGAAAACC 60.318 55.000 0.00 0.00 0.00 3.27
3050 4810 0.382873 ACGGAAAACCAGGCGAAAAC 59.617 50.000 0.00 0.00 0.00 2.43
3051 4811 1.104630 AACGGAAAACCAGGCGAAAA 58.895 45.000 0.00 0.00 0.00 2.29
3052 4812 1.964552 TAACGGAAAACCAGGCGAAA 58.035 45.000 0.00 0.00 0.00 3.46
3053 4813 1.964552 TTAACGGAAAACCAGGCGAA 58.035 45.000 0.00 0.00 0.00 4.70
3054 4814 2.188062 ATTAACGGAAAACCAGGCGA 57.812 45.000 0.00 0.00 0.00 5.54
3055 4815 4.160594 GTTAATTAACGGAAAACCAGGCG 58.839 43.478 12.39 0.00 0.00 5.52
3056 4816 4.487948 GGTTAATTAACGGAAAACCAGGC 58.512 43.478 19.48 0.77 39.51 4.85
3057 4817 4.379708 CCGGTTAATTAACGGAAAACCAGG 60.380 45.833 28.04 14.95 39.66 4.45
3058 4818 4.379708 CCCGGTTAATTAACGGAAAACCAG 60.380 45.833 28.04 14.51 39.66 4.00
3059 4819 3.505293 CCCGGTTAATTAACGGAAAACCA 59.495 43.478 28.04 0.00 39.66 3.67
3060 4820 3.673052 GCCCGGTTAATTAACGGAAAACC 60.673 47.826 28.04 13.74 38.36 3.27
3061 4821 3.057666 TGCCCGGTTAATTAACGGAAAAC 60.058 43.478 28.04 17.54 38.36 2.43
3062 4822 3.152341 TGCCCGGTTAATTAACGGAAAA 58.848 40.909 28.04 14.86 38.36 2.29
3063 4823 2.787994 TGCCCGGTTAATTAACGGAAA 58.212 42.857 28.04 17.20 38.36 3.13
3064 4824 2.486472 TGCCCGGTTAATTAACGGAA 57.514 45.000 28.04 15.41 38.36 4.30
3065 4825 2.486472 TTGCCCGGTTAATTAACGGA 57.514 45.000 28.04 12.76 38.36 4.69
3066 4826 3.379057 AGAATTGCCCGGTTAATTAACGG 59.621 43.478 22.47 22.47 37.07 4.44
3067 4827 4.334481 AGAGAATTGCCCGGTTAATTAACG 59.666 41.667 19.48 14.84 37.07 3.18
3068 4828 5.830000 AGAGAATTGCCCGGTTAATTAAC 57.170 39.130 18.30 18.30 35.50 2.01
3069 4829 6.184789 AGAAGAGAATTGCCCGGTTAATTAA 58.815 36.000 11.73 0.00 0.00 1.40
3070 4830 5.751586 AGAAGAGAATTGCCCGGTTAATTA 58.248 37.500 11.73 0.00 0.00 1.40
3071 4831 4.600062 AGAAGAGAATTGCCCGGTTAATT 58.400 39.130 11.61 11.61 0.00 1.40
3072 4832 4.236527 AGAAGAGAATTGCCCGGTTAAT 57.763 40.909 0.00 0.00 0.00 1.40
3073 4833 3.713826 AGAAGAGAATTGCCCGGTTAA 57.286 42.857 0.00 0.00 0.00 2.01
3074 4834 3.263425 AGAAGAAGAGAATTGCCCGGTTA 59.737 43.478 0.00 0.00 0.00 2.85
3075 4835 2.040412 AGAAGAAGAGAATTGCCCGGTT 59.960 45.455 0.00 0.00 0.00 4.44
3076 4836 1.630878 AGAAGAAGAGAATTGCCCGGT 59.369 47.619 0.00 0.00 0.00 5.28
3077 4837 2.409948 AGAAGAAGAGAATTGCCCGG 57.590 50.000 0.00 0.00 0.00 5.73
3078 4838 6.442513 AATTAAGAAGAAGAGAATTGCCCG 57.557 37.500 0.00 0.00 0.00 6.13
3079 4839 9.958234 GATTAATTAAGAAGAAGAGAATTGCCC 57.042 33.333 3.94 0.00 0.00 5.36
3080 4840 9.657121 CGATTAATTAAGAAGAAGAGAATTGCC 57.343 33.333 3.94 0.00 0.00 4.52
3085 4845 9.547753 CCCATCGATTAATTAAGAAGAAGAGAA 57.452 33.333 3.94 0.00 0.00 2.87
3086 4846 8.150945 CCCCATCGATTAATTAAGAAGAAGAGA 58.849 37.037 3.94 0.00 0.00 3.10
3087 4847 7.095017 GCCCCATCGATTAATTAAGAAGAAGAG 60.095 40.741 3.94 0.00 0.00 2.85
3088 4848 6.710744 GCCCCATCGATTAATTAAGAAGAAGA 59.289 38.462 3.94 0.00 0.00 2.87
3089 4849 6.486657 TGCCCCATCGATTAATTAAGAAGAAG 59.513 38.462 3.94 1.03 0.00 2.85
3090 4850 6.361433 TGCCCCATCGATTAATTAAGAAGAA 58.639 36.000 3.94 0.00 0.00 2.52
3091 4851 5.935945 TGCCCCATCGATTAATTAAGAAGA 58.064 37.500 3.94 3.72 0.00 2.87
3092 4852 6.633500 TTGCCCCATCGATTAATTAAGAAG 57.367 37.500 3.94 0.00 0.00 2.85
3093 4853 7.505585 AGATTTGCCCCATCGATTAATTAAGAA 59.494 33.333 3.94 0.00 0.00 2.52
3094 4854 7.004086 AGATTTGCCCCATCGATTAATTAAGA 58.996 34.615 3.94 0.00 0.00 2.10
3095 4855 7.219484 AGATTTGCCCCATCGATTAATTAAG 57.781 36.000 3.94 0.00 0.00 1.85
3096 4856 7.595819 AAGATTTGCCCCATCGATTAATTAA 57.404 32.000 0.00 0.00 0.00 1.40
3097 4857 7.595819 AAAGATTTGCCCCATCGATTAATTA 57.404 32.000 0.00 0.00 0.00 1.40
3098 4858 6.484364 AAAGATTTGCCCCATCGATTAATT 57.516 33.333 0.00 0.00 0.00 1.40
3099 4859 6.282930 CAAAAGATTTGCCCCATCGATTAAT 58.717 36.000 0.00 0.00 0.00 1.40
3100 4860 5.659463 CAAAAGATTTGCCCCATCGATTAA 58.341 37.500 0.00 0.00 0.00 1.40
3101 4861 4.441356 GCAAAAGATTTGCCCCATCGATTA 60.441 41.667 15.12 0.00 39.38 1.75
3102 4862 3.679639 GCAAAAGATTTGCCCCATCGATT 60.680 43.478 15.12 0.00 39.38 3.34
3103 4863 2.159057 GCAAAAGATTTGCCCCATCGAT 60.159 45.455 15.12 0.00 39.38 3.59
3104 4864 1.204467 GCAAAAGATTTGCCCCATCGA 59.796 47.619 15.12 0.00 39.38 3.59
3105 4865 1.643880 GCAAAAGATTTGCCCCATCG 58.356 50.000 15.12 0.00 39.38 3.84
3112 4872 2.438868 AACGGAGGCAAAAGATTTGC 57.561 45.000 17.18 17.18 44.22 3.68
3113 4873 2.979813 CGAAACGGAGGCAAAAGATTTG 59.020 45.455 0.00 0.00 0.00 2.32
3114 4874 3.282831 CGAAACGGAGGCAAAAGATTT 57.717 42.857 0.00 0.00 0.00 2.17
3115 4875 2.989422 CGAAACGGAGGCAAAAGATT 57.011 45.000 0.00 0.00 0.00 2.40
3127 4887 7.271219 ACATGTGGTAATGTTTCCGAAACGG 62.271 44.000 17.16 3.66 42.27 4.44
3128 4888 3.881780 TGTGGTAATGTTTCCGAAACG 57.118 42.857 17.16 0.00 44.28 3.60
3129 4889 5.116069 ACATGTGGTAATGTTTCCGAAAC 57.884 39.130 15.81 15.81 37.50 2.78
3130 4890 6.879276 TTACATGTGGTAATGTTTCCGAAA 57.121 33.333 9.11 0.00 41.09 3.46
3131 4891 6.879276 TTTACATGTGGTAATGTTTCCGAA 57.121 33.333 9.11 0.00 41.43 4.30
3132 4892 7.455641 AATTTACATGTGGTAATGTTTCCGA 57.544 32.000 9.11 0.00 41.43 4.55
3133 4893 9.627395 TTAAATTTACATGTGGTAATGTTTCCG 57.373 29.630 9.11 0.00 41.43 4.30
3138 4898 9.921637 CTGGTTTAAATTTACATGTGGTAATGT 57.078 29.630 9.11 3.63 41.43 2.71
3139 4899 8.868916 GCTGGTTTAAATTTACATGTGGTAATG 58.131 33.333 9.11 0.00 41.43 1.90
3140 4900 8.811994 AGCTGGTTTAAATTTACATGTGGTAAT 58.188 29.630 9.11 2.84 41.43 1.89
3688 5684 3.762779 CGAAATGTTGAAATCCCAGCTC 58.237 45.455 0.00 0.00 0.00 4.09
3889 5885 1.303643 CAAGTCAAGGTCCTGGGGC 60.304 63.158 0.00 0.00 0.00 5.80
3966 5962 6.777213 AACTACAGATTGAGATAACTCCGT 57.223 37.500 0.00 0.00 41.99 4.69
4042 6038 2.168106 CTGACCTTATGAGCAGCTGACT 59.832 50.000 20.43 14.36 0.00 3.41
4157 6153 5.643421 AATTCTATCAGACAGGCTGGAAT 57.357 39.130 20.34 12.54 44.98 3.01
4679 7022 2.165641 GGACCTTTGAAATAAAGCCCCG 59.834 50.000 0.00 0.00 0.00 5.73
4721 7064 9.308000 AGAATATCAAAATAAACCACAACTCCA 57.692 29.630 0.00 0.00 0.00 3.86
4759 7102 3.202151 AGAACTCCAGGGTTTTCAGTTCA 59.798 43.478 15.48 0.00 43.62 3.18
4799 7142 3.008266 TGTTCATTCTCACTCATGCTGGA 59.992 43.478 0.00 0.00 0.00 3.86
4810 7153 8.853126 ACATCTTTTCTGAAATGTTCATTCTCA 58.147 29.630 13.61 4.95 39.30 3.27
4918 7261 7.783596 ACTCCCTCCGTAAAGAAATATAAGAGA 59.216 37.037 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.