Multiple sequence alignment - TraesCS3B01G241900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G241900 chr3B 100.000 4139 0 0 1 4139 381759249 381763387 0.000000e+00 7644.0
1 TraesCS3B01G241900 chr3B 100.000 3892 0 0 4369 8260 381763617 381767508 0.000000e+00 7188.0
2 TraesCS3B01G241900 chr3A 97.150 2526 54 9 5443 7956 379831943 379834462 0.000000e+00 4250.0
3 TraesCS3B01G241900 chr3A 97.158 2252 52 5 1867 4106 379828398 379830649 0.000000e+00 3794.0
4 TraesCS3B01G241900 chr3A 92.358 1832 82 16 58 1875 379826428 379828215 0.000000e+00 2555.0
5 TraesCS3B01G241900 chr3A 94.614 854 28 9 4372 5208 379830689 379831541 0.000000e+00 1306.0
6 TraesCS3B01G241900 chr3A 93.910 312 13 2 7955 8260 379834525 379834836 4.510000e-127 466.0
7 TraesCS3B01G241900 chr3A 96.266 241 9 0 5207 5447 379831677 379831917 6.010000e-106 396.0
8 TraesCS3B01G241900 chr3D 96.941 2256 55 4 499 2740 289108679 289110934 0.000000e+00 3771.0
9 TraesCS3B01G241900 chr3D 96.264 2195 31 12 6089 8260 289114375 289116541 0.000000e+00 3552.0
10 TraesCS3B01G241900 chr3D 94.774 1416 46 11 2748 4135 289111159 289112574 0.000000e+00 2180.0
11 TraesCS3B01G241900 chr3D 93.165 834 42 3 4386 5204 289112866 289113699 0.000000e+00 1210.0
12 TraesCS3B01G241900 chr3D 93.246 533 12 2 5207 5715 289113845 289114377 0.000000e+00 763.0
13 TraesCS3B01G241900 chr3D 92.460 504 35 3 1 503 289107922 289108423 0.000000e+00 717.0
14 TraesCS3B01G241900 chr2B 88.060 804 48 19 6934 7726 168603717 168604483 0.000000e+00 909.0
15 TraesCS3B01G241900 chr2B 86.325 234 9 9 7725 7950 168609781 168609999 4.980000e-57 233.0
16 TraesCS3B01G241900 chr2D 87.389 674 49 13 7078 7726 117814902 117815564 0.000000e+00 741.0
17 TraesCS3B01G241900 chr2D 90.854 164 11 3 6934 7096 117814718 117814878 5.020000e-52 217.0
18 TraesCS3B01G241900 chr2D 100.000 33 0 0 7078 7110 117814854 117814886 2.490000e-05 62.1
19 TraesCS3B01G241900 chr2D 100.000 33 0 0 7049 7081 117814882 117814914 2.490000e-05 62.1
20 TraesCS3B01G241900 chr6D 94.294 333 16 3 5711 6041 104589134 104588803 2.660000e-139 507.0
21 TraesCS3B01G241900 chr6D 90.984 122 8 2 3731 3849 65644093 65644214 2.390000e-35 161.0
22 TraesCS3B01G241900 chr2A 91.781 365 29 1 5713 6077 88664493 88664856 2.660000e-139 507.0
23 TraesCS3B01G241900 chr2A 88.043 368 42 2 5711 6077 621564580 621564214 1.270000e-117 435.0
24 TraesCS3B01G241900 chr2A 75.452 387 84 11 2 384 496668830 496669209 2.370000e-40 178.0
25 TraesCS3B01G241900 chr1B 94.643 112 6 0 5966 6077 603100915 603101026 3.060000e-39 174.0
26 TraesCS3B01G241900 chr5A 93.860 114 5 1 3743 3854 382070070 382069957 3.960000e-38 171.0
27 TraesCS3B01G241900 chr7B 92.373 118 5 4 3742 3857 114501701 114501586 1.840000e-36 165.0
28 TraesCS3B01G241900 chr7D 93.636 110 4 2 3745 3851 454079182 454079073 2.390000e-35 161.0
29 TraesCS3B01G241900 chr7D 90.756 119 6 4 3742 3857 152649376 152649260 3.990000e-33 154.0
30 TraesCS3B01G241900 chr1A 92.857 112 6 1 3742 3851 240310237 240310126 2.390000e-35 161.0
31 TraesCS3B01G241900 chr4A 91.304 115 8 1 3742 3854 460230756 460230642 1.110000e-33 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G241900 chr3B 381759249 381767508 8259 False 7416.000000 7644 100.000000 1 8260 2 chr3B.!!$F1 8259
1 TraesCS3B01G241900 chr3A 379826428 379834836 8408 False 2127.833333 4250 95.242667 58 8260 6 chr3A.!!$F1 8202
2 TraesCS3B01G241900 chr3D 289107922 289116541 8619 False 2032.166667 3771 94.475000 1 8260 6 chr3D.!!$F1 8259
3 TraesCS3B01G241900 chr2B 168603717 168604483 766 False 909.000000 909 88.060000 6934 7726 1 chr2B.!!$F1 792
4 TraesCS3B01G241900 chr2D 117814718 117815564 846 False 270.550000 741 94.560750 6934 7726 4 chr2D.!!$F1 792

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 162 0.798776 GTGAGATTTGGTGTCAGGCG 59.201 55.000 0.00 0.00 29.63 5.52 F
319 320 1.141019 TGTTATCGGCTCGTCCTGC 59.859 57.895 0.00 0.00 0.00 4.85 F
330 331 1.154016 CGTCCTGCCGTCAGTACTG 60.154 63.158 17.17 17.17 38.66 2.74 F
1630 1906 1.262151 TGAAACGAGTTGGCTTTACGC 59.738 47.619 0.00 0.00 38.13 4.42 F
2032 2508 1.883926 GCGTGTTCCCAAGGTTAACAT 59.116 47.619 8.10 0.00 35.72 2.71 F
3156 3878 1.221840 CTACCGCACTGGCTTCCAT 59.778 57.895 0.00 0.00 43.94 3.41 F
3413 4138 0.692476 ATACTGGCACTTGTGGCTGA 59.308 50.000 29.82 18.43 37.14 4.26 F
5134 5909 0.036010 CCAATCCTGAGCCTGACGTT 60.036 55.000 0.00 0.00 0.00 3.99 F
5809 6768 0.030705 TAGCCCTCTCTTCCCATGCT 60.031 55.000 0.00 0.00 0.00 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1193 1469 1.247567 CAAAAGAGCAACCATCCCGT 58.752 50.000 0.00 0.00 0.00 5.28 R
2244 2720 0.457035 TACGGGTCAACGCCTATCAC 59.543 55.000 0.00 0.00 37.37 3.06 R
2252 2728 1.931172 CTAAATGGCTACGGGTCAACG 59.069 52.381 0.00 0.00 40.31 4.10 R
2990 3688 1.102154 TAACATCGCATTGCAAGGGG 58.898 50.000 20.68 20.68 0.00 4.79 R
3169 3891 1.151450 CAGTGCCCACCTCCAAAGT 59.849 57.895 0.00 0.00 0.00 2.66 R
4833 5602 0.388907 GTGTCGTAAAGCCAGCCGTA 60.389 55.000 0.00 0.00 0.00 4.02 R
5272 6200 0.748729 ATCCTCACCTCGTCGGAGTC 60.749 60.000 0.00 0.00 38.70 3.36 R
5987 6946 0.106015 AGACTGTTTTGCCCCTGCTT 60.106 50.000 0.00 0.00 38.71 3.91 R
7750 9167 0.104855 TCGAAATCGGATGCAGAGGG 59.895 55.000 2.63 0.00 40.29 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.793278 AATGGCGACGCTTTTTCTTT 57.207 40.000 20.77 4.19 0.00 2.52
23 24 1.045477 GCGACGCTTTTTCTTTGAGC 58.955 50.000 13.73 0.00 0.00 4.26
33 34 6.038985 GCTTTTTCTTTGAGCTTGTCTTTCT 58.961 36.000 0.00 0.00 33.72 2.52
46 47 6.492772 AGCTTGTCTTTCTGATTTCAATCCTT 59.507 34.615 0.00 0.00 34.50 3.36
86 87 3.427243 GACATAGTCGACGAAACTCCAG 58.573 50.000 10.46 0.00 0.00 3.86
107 108 2.876091 CGTAGATTCTTGCCGTCTTCA 58.124 47.619 0.00 0.00 0.00 3.02
115 116 4.166011 GCCGTCTTCATGGTGCGC 62.166 66.667 0.00 0.00 0.00 6.09
118 119 4.505217 GTCTTCATGGTGCGCGCG 62.505 66.667 28.44 28.44 0.00 6.86
132 133 1.416050 CGCGCGAGGTTAGGGTTTAC 61.416 60.000 28.94 0.00 0.00 2.01
140 141 4.322499 CGAGGTTAGGGTTTACTGTCATGT 60.322 45.833 0.00 0.00 0.00 3.21
161 162 0.798776 GTGAGATTTGGTGTCAGGCG 59.201 55.000 0.00 0.00 29.63 5.52
184 185 4.394300 GCTTCAGATGTATGCAAGTGTTCT 59.606 41.667 0.00 0.00 0.00 3.01
211 212 4.514577 ATCGCGACTCCAAGGCCG 62.515 66.667 12.93 0.00 0.00 6.13
225 226 2.686106 GCCGTGGTCCTAAGGGGA 60.686 66.667 0.00 0.00 42.77 4.81
243 244 4.018050 AGGGGAAAGTGCATGAAGACTATT 60.018 41.667 0.00 0.00 0.00 1.73
244 245 4.706962 GGGGAAAGTGCATGAAGACTATTT 59.293 41.667 0.00 0.00 0.00 1.40
261 262 5.171476 ACTATTTGACTGTCATCGACAAGG 58.829 41.667 11.86 3.10 42.26 3.61
292 293 3.890147 GACTCTGGTATAAGGGTGACGAT 59.110 47.826 0.00 0.00 28.34 3.73
319 320 1.141019 TGTTATCGGCTCGTCCTGC 59.859 57.895 0.00 0.00 0.00 4.85
330 331 1.154016 CGTCCTGCCGTCAGTACTG 60.154 63.158 17.17 17.17 38.66 2.74
385 386 7.858052 ATTTTTATTGTGTTTGAGAAGCTCG 57.142 32.000 0.00 0.00 32.35 5.03
523 794 4.908481 AGGGTATTCTTCTCCCACTAATCC 59.092 45.833 0.00 0.00 43.31 3.01
524 795 4.658901 GGGTATTCTTCTCCCACTAATCCA 59.341 45.833 0.00 0.00 40.79 3.41
539 810 6.013379 CCACTAATCCATCCCACATACATACT 60.013 42.308 0.00 0.00 0.00 2.12
679 955 2.614057 CGACACAGCAATTAATCCCCTC 59.386 50.000 0.00 0.00 0.00 4.30
1287 1563 2.167693 TCTCGCGTCTATTTGGGTTGAT 59.832 45.455 5.77 0.00 0.00 2.57
1293 1569 4.096382 GCGTCTATTTGGGTTGATGATTGT 59.904 41.667 0.00 0.00 0.00 2.71
1381 1657 5.598005 TGTTTCTCTGTGGGACAATTTTCAT 59.402 36.000 0.00 0.00 44.16 2.57
1452 1728 5.163814 GCTGTGGTGAACTGAAATGTATCTC 60.164 44.000 0.00 0.00 0.00 2.75
1499 1775 3.885297 AGTTGCCCCATTAATTCTCGATG 59.115 43.478 0.00 0.00 0.00 3.84
1630 1906 1.262151 TGAAACGAGTTGGCTTTACGC 59.738 47.619 0.00 0.00 38.13 4.42
2032 2508 1.883926 GCGTGTTCCCAAGGTTAACAT 59.116 47.619 8.10 0.00 35.72 2.71
2252 2728 6.318648 TGTTCCATCAATGTAAAGTGATAGGC 59.681 38.462 0.00 0.00 33.15 3.93
2562 3040 3.451540 AGAAGAGAGTTCCCCGGTTAATC 59.548 47.826 0.00 0.00 0.00 1.75
2934 3632 2.650322 ACCTTTTGCCGTTCTGAGAAA 58.350 42.857 0.00 0.00 0.00 2.52
2990 3688 4.353437 ACGGACCGAAGCCACGTC 62.353 66.667 23.38 0.00 31.39 4.34
3050 3748 2.413112 CACAAGAAGCGTCAATCATCGT 59.587 45.455 1.61 0.00 0.00 3.73
3096 3818 5.404946 CCTTAGAACATGTTGAAGCATTGG 58.595 41.667 17.58 3.63 0.00 3.16
3133 3855 2.920724 TACTATGCCAATGCCGCTAA 57.079 45.000 0.00 0.00 36.33 3.09
3156 3878 1.221840 CTACCGCACTGGCTTCCAT 59.778 57.895 0.00 0.00 43.94 3.41
3275 3997 1.228429 TAACACCCCAAGCTGCCAC 60.228 57.895 0.00 0.00 0.00 5.01
3396 4118 3.038280 TGGAATTGGAGGAAGCGAGATA 58.962 45.455 0.00 0.00 0.00 1.98
3413 4138 0.692476 ATACTGGCACTTGTGGCTGA 59.308 50.000 29.82 18.43 37.14 4.26
3476 4201 1.195115 CTAGTGCTGGCTAGGGTTCA 58.805 55.000 0.00 0.00 35.89 3.18
3516 4241 0.834687 TGAGGGTTTAGGCGACAGGT 60.835 55.000 0.00 0.00 0.00 4.00
3578 4303 7.934120 ACACTATTAGAATGACCTTCCATAAGC 59.066 37.037 0.00 0.00 34.11 3.09
3621 4346 0.767375 ACAACCAGAGACCATGCAGT 59.233 50.000 0.00 0.00 0.00 4.40
3800 4525 9.731819 CACACTAAAACGTGTCTATATACATCT 57.268 33.333 0.00 0.00 45.74 2.90
3946 4672 7.219484 AGGGCATTGCTTGATGTATTATTAC 57.781 36.000 8.82 0.00 0.00 1.89
4050 4778 4.911514 ACGGTAACTGTTCATTTGCTTT 57.088 36.364 0.00 0.00 0.00 3.51
4051 4779 5.257082 ACGGTAACTGTTCATTTGCTTTT 57.743 34.783 0.00 0.00 0.00 2.27
4130 4858 7.622893 TTTCGAATGATGAATGGTTGACATA 57.377 32.000 0.00 0.00 39.40 2.29
4424 5193 7.334421 ACATTTAACCACATGATGACAGTACTC 59.666 37.037 0.00 0.00 0.00 2.59
4461 5230 7.756722 GCAATTCACTGCTATGTTTAAGTTGAT 59.243 33.333 0.00 0.00 39.34 2.57
4669 5438 4.804420 TCCTCGCCCCATCAGCCT 62.804 66.667 0.00 0.00 0.00 4.58
4731 5500 4.680237 CCGCAGTTCGCACCCAGA 62.680 66.667 0.00 0.00 42.60 3.86
4784 5553 1.398041 CAACGTCGCCAATGTCATCAT 59.602 47.619 0.00 0.00 35.59 2.45
4798 5567 2.847327 CATCATAGGATGCCTCGGTT 57.153 50.000 4.16 0.00 44.03 4.44
4800 5569 3.480470 CATCATAGGATGCCTCGGTTTT 58.520 45.455 4.16 0.00 44.03 2.43
4833 5602 1.447317 CTCAAACGCTGGCCACAACT 61.447 55.000 0.00 0.00 0.00 3.16
4834 5603 0.179043 TCAAACGCTGGCCACAACTA 60.179 50.000 0.00 0.00 0.00 2.24
4903 5678 2.968206 GGTGGTACGCTTCGTCCT 59.032 61.111 0.00 0.00 41.54 3.85
4999 5774 2.589157 CCTCACCCCCTACACGCAA 61.589 63.158 0.00 0.00 0.00 4.85
5039 5814 2.670148 GGGAGCCCAAGACCACGAT 61.670 63.158 0.00 0.00 35.81 3.73
5134 5909 0.036010 CCAATCCTGAGCCTGACGTT 60.036 55.000 0.00 0.00 0.00 3.99
5191 5976 2.784596 CGTCGCGCCAACATCATT 59.215 55.556 0.00 0.00 0.00 2.57
5272 6200 1.410004 TTGCCTACTGGATCCTACCG 58.590 55.000 14.23 1.42 34.57 4.02
5376 6304 2.063378 GCTGCCTGTAGGAGCCTCT 61.063 63.158 1.17 0.00 37.39 3.69
5453 6411 1.819288 GTCGAGGTGAACATCCTCTGA 59.181 52.381 15.58 12.77 46.49 3.27
5588 6546 6.726764 ACAGAGAGAGTGGGAAGTTATTTAGT 59.273 38.462 0.00 0.00 0.00 2.24
5616 6575 2.376518 TCTTCTTTTGAGCTGATGGGGT 59.623 45.455 0.00 0.00 0.00 4.95
5726 6685 8.415950 CATCTATAGATGTACTCCCTCTGTTT 57.584 38.462 27.83 0.00 45.10 2.83
5727 6686 8.519526 CATCTATAGATGTACTCCCTCTGTTTC 58.480 40.741 27.83 0.00 45.10 2.78
5728 6687 7.817440 TCTATAGATGTACTCCCTCTGTTTCT 58.183 38.462 0.00 0.00 0.00 2.52
5729 6688 8.946248 TCTATAGATGTACTCCCTCTGTTTCTA 58.054 37.037 0.00 0.00 0.00 2.10
5730 6689 9.747898 CTATAGATGTACTCCCTCTGTTTCTAT 57.252 37.037 0.00 0.00 0.00 1.98
5732 6691 7.741554 AGATGTACTCCCTCTGTTTCTATTT 57.258 36.000 0.00 0.00 0.00 1.40
5733 6692 8.152023 AGATGTACTCCCTCTGTTTCTATTTT 57.848 34.615 0.00 0.00 0.00 1.82
5734 6693 8.043710 AGATGTACTCCCTCTGTTTCTATTTTG 58.956 37.037 0.00 0.00 0.00 2.44
5735 6694 7.074653 TGTACTCCCTCTGTTTCTATTTTGT 57.925 36.000 0.00 0.00 0.00 2.83
5736 6695 7.159372 TGTACTCCCTCTGTTTCTATTTTGTC 58.841 38.462 0.00 0.00 0.00 3.18
5737 6696 6.441088 ACTCCCTCTGTTTCTATTTTGTCT 57.559 37.500 0.00 0.00 0.00 3.41
5738 6697 6.234177 ACTCCCTCTGTTTCTATTTTGTCTG 58.766 40.000 0.00 0.00 0.00 3.51
5739 6698 5.003804 TCCCTCTGTTTCTATTTTGTCTGC 58.996 41.667 0.00 0.00 0.00 4.26
5740 6699 4.142816 CCCTCTGTTTCTATTTTGTCTGCG 60.143 45.833 0.00 0.00 0.00 5.18
5741 6700 4.452455 CCTCTGTTTCTATTTTGTCTGCGT 59.548 41.667 0.00 0.00 0.00 5.24
5742 6701 5.637810 CCTCTGTTTCTATTTTGTCTGCGTA 59.362 40.000 0.00 0.00 0.00 4.42
5743 6702 6.313905 CCTCTGTTTCTATTTTGTCTGCGTAT 59.686 38.462 0.00 0.00 0.00 3.06
5744 6703 7.491372 CCTCTGTTTCTATTTTGTCTGCGTATA 59.509 37.037 0.00 0.00 0.00 1.47
5745 6704 8.766000 TCTGTTTCTATTTTGTCTGCGTATAA 57.234 30.769 0.00 0.00 0.00 0.98
5746 6705 8.869897 TCTGTTTCTATTTTGTCTGCGTATAAG 58.130 33.333 0.00 0.00 0.00 1.73
5747 6706 8.542497 TGTTTCTATTTTGTCTGCGTATAAGT 57.458 30.769 0.00 0.00 0.00 2.24
5748 6707 8.995220 TGTTTCTATTTTGTCTGCGTATAAGTT 58.005 29.630 0.00 0.00 0.00 2.66
5749 6708 9.821662 GTTTCTATTTTGTCTGCGTATAAGTTT 57.178 29.630 0.00 0.00 0.00 2.66
5752 6711 9.431887 TCTATTTTGTCTGCGTATAAGTTTTCT 57.568 29.630 0.00 0.00 0.00 2.52
5753 6712 9.690434 CTATTTTGTCTGCGTATAAGTTTTCTC 57.310 33.333 0.00 0.00 0.00 2.87
5754 6713 7.485418 TTTTGTCTGCGTATAAGTTTTCTCA 57.515 32.000 0.00 0.00 0.00 3.27
5755 6714 6.706055 TTGTCTGCGTATAAGTTTTCTCAG 57.294 37.500 0.00 0.00 0.00 3.35
5756 6715 5.779922 TGTCTGCGTATAAGTTTTCTCAGT 58.220 37.500 0.00 0.00 0.00 3.41
5757 6716 6.220930 TGTCTGCGTATAAGTTTTCTCAGTT 58.779 36.000 0.00 0.00 0.00 3.16
5758 6717 6.704493 TGTCTGCGTATAAGTTTTCTCAGTTT 59.296 34.615 0.00 0.00 0.00 2.66
5759 6718 7.225931 TGTCTGCGTATAAGTTTTCTCAGTTTT 59.774 33.333 0.00 0.00 0.00 2.43
5760 6719 8.068380 GTCTGCGTATAAGTTTTCTCAGTTTTT 58.932 33.333 0.00 0.00 0.00 1.94
5783 6742 0.727398 GCAATAGTCTGCGTGTTCCC 59.273 55.000 0.00 0.00 31.50 3.97
5784 6743 1.676014 GCAATAGTCTGCGTGTTCCCT 60.676 52.381 0.00 0.00 31.50 4.20
5785 6744 2.699954 CAATAGTCTGCGTGTTCCCTT 58.300 47.619 0.00 0.00 0.00 3.95
5786 6745 2.673368 CAATAGTCTGCGTGTTCCCTTC 59.327 50.000 0.00 0.00 0.00 3.46
5787 6746 1.629043 TAGTCTGCGTGTTCCCTTCT 58.371 50.000 0.00 0.00 0.00 2.85
5788 6747 0.759346 AGTCTGCGTGTTCCCTTCTT 59.241 50.000 0.00 0.00 0.00 2.52
5789 6748 1.141053 AGTCTGCGTGTTCCCTTCTTT 59.859 47.619 0.00 0.00 0.00 2.52
5790 6749 1.947456 GTCTGCGTGTTCCCTTCTTTT 59.053 47.619 0.00 0.00 0.00 2.27
5791 6750 3.135994 GTCTGCGTGTTCCCTTCTTTTA 58.864 45.455 0.00 0.00 0.00 1.52
5792 6751 3.186613 GTCTGCGTGTTCCCTTCTTTTAG 59.813 47.826 0.00 0.00 0.00 1.85
5793 6752 1.877443 TGCGTGTTCCCTTCTTTTAGC 59.123 47.619 0.00 0.00 0.00 3.09
5794 6753 1.199327 GCGTGTTCCCTTCTTTTAGCC 59.801 52.381 0.00 0.00 0.00 3.93
5795 6754 1.810755 CGTGTTCCCTTCTTTTAGCCC 59.189 52.381 0.00 0.00 0.00 5.19
5796 6755 2.552373 CGTGTTCCCTTCTTTTAGCCCT 60.552 50.000 0.00 0.00 0.00 5.19
5797 6756 3.082548 GTGTTCCCTTCTTTTAGCCCTC 58.917 50.000 0.00 0.00 0.00 4.30
5798 6757 2.986728 TGTTCCCTTCTTTTAGCCCTCT 59.013 45.455 0.00 0.00 0.00 3.69
5799 6758 3.009143 TGTTCCCTTCTTTTAGCCCTCTC 59.991 47.826 0.00 0.00 0.00 3.20
5800 6759 3.207044 TCCCTTCTTTTAGCCCTCTCT 57.793 47.619 0.00 0.00 0.00 3.10
5801 6760 3.532102 TCCCTTCTTTTAGCCCTCTCTT 58.468 45.455 0.00 0.00 0.00 2.85
5802 6761 3.519913 TCCCTTCTTTTAGCCCTCTCTTC 59.480 47.826 0.00 0.00 0.00 2.87
5803 6762 3.371059 CCCTTCTTTTAGCCCTCTCTTCC 60.371 52.174 0.00 0.00 0.00 3.46
5804 6763 3.371059 CCTTCTTTTAGCCCTCTCTTCCC 60.371 52.174 0.00 0.00 0.00 3.97
5805 6764 2.915869 TCTTTTAGCCCTCTCTTCCCA 58.084 47.619 0.00 0.00 0.00 4.37
5806 6765 3.464828 TCTTTTAGCCCTCTCTTCCCAT 58.535 45.455 0.00 0.00 0.00 4.00
5807 6766 3.200825 TCTTTTAGCCCTCTCTTCCCATG 59.799 47.826 0.00 0.00 0.00 3.66
5808 6767 0.839946 TTAGCCCTCTCTTCCCATGC 59.160 55.000 0.00 0.00 0.00 4.06
5809 6768 0.030705 TAGCCCTCTCTTCCCATGCT 60.031 55.000 0.00 0.00 0.00 3.79
5810 6769 1.153005 GCCCTCTCTTCCCATGCTG 60.153 63.158 0.00 0.00 0.00 4.41
5811 6770 1.153005 CCCTCTCTTCCCATGCTGC 60.153 63.158 0.00 0.00 0.00 5.25
5812 6771 1.153005 CCTCTCTTCCCATGCTGCC 60.153 63.158 0.00 0.00 0.00 4.85
5813 6772 1.153005 CTCTCTTCCCATGCTGCCC 60.153 63.158 0.00 0.00 0.00 5.36
5814 6773 2.123982 CTCTTCCCATGCTGCCCC 60.124 66.667 0.00 0.00 0.00 5.80
5815 6774 2.614969 TCTTCCCATGCTGCCCCT 60.615 61.111 0.00 0.00 0.00 4.79
5816 6775 2.123982 CTTCCCATGCTGCCCCTC 60.124 66.667 0.00 0.00 0.00 4.30
5817 6776 2.614969 TTCCCATGCTGCCCCTCT 60.615 61.111 0.00 0.00 0.00 3.69
5818 6777 1.307778 TTCCCATGCTGCCCCTCTA 60.308 57.895 0.00 0.00 0.00 2.43
5819 6778 0.698886 TTCCCATGCTGCCCCTCTAT 60.699 55.000 0.00 0.00 0.00 1.98
5820 6779 0.698886 TCCCATGCTGCCCCTCTATT 60.699 55.000 0.00 0.00 0.00 1.73
5821 6780 0.251077 CCCATGCTGCCCCTCTATTC 60.251 60.000 0.00 0.00 0.00 1.75
5822 6781 0.251077 CCATGCTGCCCCTCTATTCC 60.251 60.000 0.00 0.00 0.00 3.01
5823 6782 0.604780 CATGCTGCCCCTCTATTCCG 60.605 60.000 0.00 0.00 0.00 4.30
5824 6783 2.281139 GCTGCCCCTCTATTCCGC 60.281 66.667 0.00 0.00 0.00 5.54
5825 6784 2.812619 GCTGCCCCTCTATTCCGCT 61.813 63.158 0.00 0.00 0.00 5.52
5826 6785 1.832912 CTGCCCCTCTATTCCGCTT 59.167 57.895 0.00 0.00 0.00 4.68
5827 6786 0.181350 CTGCCCCTCTATTCCGCTTT 59.819 55.000 0.00 0.00 0.00 3.51
5828 6787 0.623723 TGCCCCTCTATTCCGCTTTT 59.376 50.000 0.00 0.00 0.00 2.27
5829 6788 1.309950 GCCCCTCTATTCCGCTTTTC 58.690 55.000 0.00 0.00 0.00 2.29
5830 6789 1.968704 CCCCTCTATTCCGCTTTTCC 58.031 55.000 0.00 0.00 0.00 3.13
5831 6790 1.477014 CCCCTCTATTCCGCTTTTCCC 60.477 57.143 0.00 0.00 0.00 3.97
5832 6791 1.477014 CCCTCTATTCCGCTTTTCCCC 60.477 57.143 0.00 0.00 0.00 4.81
5833 6792 1.583054 CTCTATTCCGCTTTTCCCCG 58.417 55.000 0.00 0.00 0.00 5.73
5834 6793 0.906775 TCTATTCCGCTTTTCCCCGT 59.093 50.000 0.00 0.00 0.00 5.28
5835 6794 1.134610 TCTATTCCGCTTTTCCCCGTC 60.135 52.381 0.00 0.00 0.00 4.79
5836 6795 0.906775 TATTCCGCTTTTCCCCGTCT 59.093 50.000 0.00 0.00 0.00 4.18
5837 6796 0.906775 ATTCCGCTTTTCCCCGTCTA 59.093 50.000 0.00 0.00 0.00 2.59
5838 6797 0.686224 TTCCGCTTTTCCCCGTCTAA 59.314 50.000 0.00 0.00 0.00 2.10
5839 6798 0.906775 TCCGCTTTTCCCCGTCTAAT 59.093 50.000 0.00 0.00 0.00 1.73
5840 6799 1.134610 TCCGCTTTTCCCCGTCTAATC 60.135 52.381 0.00 0.00 0.00 1.75
5841 6800 1.296727 CGCTTTTCCCCGTCTAATCC 58.703 55.000 0.00 0.00 0.00 3.01
5842 6801 1.296727 GCTTTTCCCCGTCTAATCCG 58.703 55.000 0.00 0.00 0.00 4.18
5843 6802 1.296727 CTTTTCCCCGTCTAATCCGC 58.703 55.000 0.00 0.00 0.00 5.54
5844 6803 0.906775 TTTTCCCCGTCTAATCCGCT 59.093 50.000 0.00 0.00 0.00 5.52
5845 6804 0.177141 TTTCCCCGTCTAATCCGCTG 59.823 55.000 0.00 0.00 0.00 5.18
5846 6805 2.280186 CCCCGTCTAATCCGCTGC 60.280 66.667 0.00 0.00 0.00 5.25
5847 6806 2.499205 CCCGTCTAATCCGCTGCA 59.501 61.111 0.00 0.00 0.00 4.41
5848 6807 1.069765 CCCGTCTAATCCGCTGCAT 59.930 57.895 0.00 0.00 0.00 3.96
5849 6808 1.224069 CCCGTCTAATCCGCTGCATG 61.224 60.000 0.00 0.00 0.00 4.06
5850 6809 1.566563 CGTCTAATCCGCTGCATGC 59.433 57.895 11.82 11.82 38.57 4.06
5851 6810 1.153597 CGTCTAATCCGCTGCATGCA 61.154 55.000 21.29 21.29 43.06 3.96
5852 6811 1.233019 GTCTAATCCGCTGCATGCAT 58.767 50.000 22.97 7.74 43.06 3.96
5853 6812 1.069432 GTCTAATCCGCTGCATGCATG 60.069 52.381 22.97 22.70 43.06 4.06
5854 6813 1.202675 TCTAATCCGCTGCATGCATGA 60.203 47.619 30.64 17.95 43.06 3.07
5855 6814 1.197036 CTAATCCGCTGCATGCATGAG 59.803 52.381 30.64 22.56 43.06 2.90
5856 6815 2.071844 AATCCGCTGCATGCATGAGC 62.072 55.000 30.64 28.62 43.06 4.26
5857 6816 4.266070 CCGCTGCATGCATGAGCC 62.266 66.667 30.64 13.12 43.06 4.70
5858 6817 3.514362 CGCTGCATGCATGAGCCA 61.514 61.111 30.64 17.01 43.06 4.75
5859 6818 2.889617 GCTGCATGCATGAGCCAA 59.110 55.556 30.64 8.38 42.31 4.52
5860 6819 1.441729 GCTGCATGCATGAGCCAAT 59.558 52.632 30.64 0.00 42.31 3.16
5861 6820 0.597637 GCTGCATGCATGAGCCAATC 60.598 55.000 30.64 10.88 42.31 2.67
5862 6821 0.032130 CTGCATGCATGAGCCAATCC 59.968 55.000 30.64 10.13 41.13 3.01
5863 6822 1.007734 GCATGCATGAGCCAATCCG 60.008 57.895 30.64 0.00 41.13 4.18
5864 6823 1.731433 GCATGCATGAGCCAATCCGT 61.731 55.000 30.64 0.00 41.13 4.69
5865 6824 0.742505 CATGCATGAGCCAATCCGTT 59.257 50.000 22.59 0.00 41.13 4.44
5866 6825 0.742505 ATGCATGAGCCAATCCGTTG 59.257 50.000 0.00 0.00 41.13 4.10
5867 6826 1.226773 GCATGAGCCAATCCGTTGC 60.227 57.895 0.00 0.00 33.90 4.17
5868 6827 1.936436 GCATGAGCCAATCCGTTGCA 61.936 55.000 0.00 0.00 33.90 4.08
5869 6828 0.742505 CATGAGCCAATCCGTTGCAT 59.257 50.000 0.00 0.00 33.90 3.96
5870 6829 0.742505 ATGAGCCAATCCGTTGCATG 59.257 50.000 0.00 0.00 33.90 4.06
5871 6830 0.608856 TGAGCCAATCCGTTGCATGT 60.609 50.000 0.00 0.00 33.90 3.21
5872 6831 0.527565 GAGCCAATCCGTTGCATGTT 59.472 50.000 0.00 0.00 33.90 2.71
5873 6832 0.968405 AGCCAATCCGTTGCATGTTT 59.032 45.000 0.00 0.00 33.90 2.83
5874 6833 2.163412 GAGCCAATCCGTTGCATGTTTA 59.837 45.455 0.00 0.00 33.90 2.01
5875 6834 2.164219 AGCCAATCCGTTGCATGTTTAG 59.836 45.455 0.00 0.00 33.90 1.85
5876 6835 2.163412 GCCAATCCGTTGCATGTTTAGA 59.837 45.455 0.00 0.00 33.90 2.10
5877 6836 3.731867 GCCAATCCGTTGCATGTTTAGAG 60.732 47.826 0.00 0.00 33.90 2.43
5878 6837 3.689161 CCAATCCGTTGCATGTTTAGAGA 59.311 43.478 0.00 0.00 33.90 3.10
5879 6838 4.201851 CCAATCCGTTGCATGTTTAGAGAG 60.202 45.833 0.00 0.00 33.90 3.20
5880 6839 3.953712 TCCGTTGCATGTTTAGAGAGA 57.046 42.857 0.00 0.00 0.00 3.10
5881 6840 4.265904 TCCGTTGCATGTTTAGAGAGAA 57.734 40.909 0.00 0.00 0.00 2.87
5882 6841 4.637276 TCCGTTGCATGTTTAGAGAGAAA 58.363 39.130 0.00 0.00 0.00 2.52
5883 6842 4.451096 TCCGTTGCATGTTTAGAGAGAAAC 59.549 41.667 0.00 0.00 39.35 2.78
5884 6843 4.452455 CCGTTGCATGTTTAGAGAGAAACT 59.548 41.667 0.00 0.00 39.57 2.66
5885 6844 5.637810 CCGTTGCATGTTTAGAGAGAAACTA 59.362 40.000 0.00 0.00 39.57 2.24
5886 6845 6.183360 CCGTTGCATGTTTAGAGAGAAACTAG 60.183 42.308 0.00 0.00 39.57 2.57
5887 6846 6.366332 CGTTGCATGTTTAGAGAGAAACTAGT 59.634 38.462 0.00 0.00 39.57 2.57
5888 6847 7.513968 GTTGCATGTTTAGAGAGAAACTAGTG 58.486 38.462 0.00 0.06 39.57 2.74
5889 6848 6.166279 TGCATGTTTAGAGAGAAACTAGTGG 58.834 40.000 0.00 0.00 39.57 4.00
5890 6849 5.582665 GCATGTTTAGAGAGAAACTAGTGGG 59.417 44.000 0.00 0.00 39.57 4.61
5891 6850 5.148651 TGTTTAGAGAGAAACTAGTGGGC 57.851 43.478 0.00 0.00 39.57 5.36
5892 6851 4.591498 TGTTTAGAGAGAAACTAGTGGGCA 59.409 41.667 0.00 0.00 39.57 5.36
5893 6852 5.071250 TGTTTAGAGAGAAACTAGTGGGCAA 59.929 40.000 0.00 0.00 39.57 4.52
5894 6853 6.174049 GTTTAGAGAGAAACTAGTGGGCAAT 58.826 40.000 0.00 0.00 36.55 3.56
5895 6854 4.479786 AGAGAGAAACTAGTGGGCAATC 57.520 45.455 0.00 0.00 0.00 2.67
5896 6855 3.198853 AGAGAGAAACTAGTGGGCAATCC 59.801 47.826 0.00 0.00 0.00 3.01
5897 6856 2.912956 AGAGAAACTAGTGGGCAATCCA 59.087 45.455 0.00 0.00 44.79 3.41
5904 6863 4.445710 TGGGCAATCCAGCGGCAT 62.446 61.111 1.45 0.00 41.46 4.40
5905 6864 3.908081 GGGCAATCCAGCGGCATG 61.908 66.667 1.45 0.00 35.00 4.06
5906 6865 4.580551 GGCAATCCAGCGGCATGC 62.581 66.667 9.90 9.90 46.98 4.06
5918 6877 4.807039 GCATGCAAAGCGGGCCAG 62.807 66.667 14.21 0.00 0.00 4.85
5919 6878 4.137872 CATGCAAAGCGGGCCAGG 62.138 66.667 4.39 0.00 0.00 4.45
5933 6892 4.478371 CAGGGGCGCATGCAGAGA 62.478 66.667 19.57 0.00 45.35 3.10
5934 6893 3.720601 AGGGGCGCATGCAGAGAA 61.721 61.111 19.57 0.00 45.35 2.87
5935 6894 3.207669 GGGGCGCATGCAGAGAAG 61.208 66.667 19.57 0.51 45.35 2.85
5936 6895 3.207669 GGGCGCATGCAGAGAAGG 61.208 66.667 19.57 0.00 45.35 3.46
5937 6896 3.207669 GGCGCATGCAGAGAAGGG 61.208 66.667 19.57 0.00 45.35 3.95
5938 6897 3.885521 GCGCATGCAGAGAAGGGC 61.886 66.667 19.57 6.33 42.15 5.19
5939 6898 3.207669 CGCATGCAGAGAAGGGCC 61.208 66.667 19.57 0.00 0.00 5.80
5940 6899 2.044650 GCATGCAGAGAAGGGCCA 60.045 61.111 14.21 0.00 0.00 5.36
5941 6900 1.679977 GCATGCAGAGAAGGGCCAA 60.680 57.895 14.21 0.00 0.00 4.52
5942 6901 1.041447 GCATGCAGAGAAGGGCCAAT 61.041 55.000 14.21 0.00 0.00 3.16
5943 6902 1.030457 CATGCAGAGAAGGGCCAATC 58.970 55.000 6.18 3.34 0.00 2.67
5944 6903 0.106318 ATGCAGAGAAGGGCCAATCC 60.106 55.000 6.18 0.00 0.00 3.01
5945 6904 1.304282 GCAGAGAAGGGCCAATCCA 59.696 57.895 6.18 0.00 36.21 3.41
5946 6905 0.106318 GCAGAGAAGGGCCAATCCAT 60.106 55.000 6.18 0.00 36.21 3.41
5947 6906 1.687368 GCAGAGAAGGGCCAATCCATT 60.687 52.381 6.18 0.00 42.38 3.16
5950 6909 1.735973 GAAGGGCCAATCCATTCGC 59.264 57.895 6.18 0.00 44.50 4.70
5951 6910 0.753111 GAAGGGCCAATCCATTCGCT 60.753 55.000 6.18 0.00 44.50 4.93
5952 6911 0.550914 AAGGGCCAATCCATTCGCTA 59.449 50.000 6.18 0.00 32.51 4.26
5953 6912 0.109342 AGGGCCAATCCATTCGCTAG 59.891 55.000 6.18 0.00 36.21 3.42
5954 6913 0.179018 GGGCCAATCCATTCGCTAGT 60.179 55.000 4.39 0.00 36.21 2.57
5955 6914 0.947244 GGCCAATCCATTCGCTAGTG 59.053 55.000 0.00 0.00 34.01 2.74
5956 6915 1.475034 GGCCAATCCATTCGCTAGTGA 60.475 52.381 0.70 0.70 34.01 3.41
5957 6916 2.288666 GCCAATCCATTCGCTAGTGAA 58.711 47.619 20.41 20.41 0.00 3.18
5958 6917 2.880890 GCCAATCCATTCGCTAGTGAAT 59.119 45.455 22.92 22.92 39.10 2.57
5959 6918 3.316308 GCCAATCCATTCGCTAGTGAATT 59.684 43.478 25.40 11.88 36.46 2.17
5960 6919 4.202050 GCCAATCCATTCGCTAGTGAATTT 60.202 41.667 25.40 16.21 36.46 1.82
5961 6920 5.008613 GCCAATCCATTCGCTAGTGAATTTA 59.991 40.000 25.40 17.48 36.46 1.40
5962 6921 6.294176 GCCAATCCATTCGCTAGTGAATTTAT 60.294 38.462 25.40 18.70 36.46 1.40
5963 6922 7.651808 CCAATCCATTCGCTAGTGAATTTATT 58.348 34.615 25.40 22.29 36.46 1.40
5964 6923 7.592533 CCAATCCATTCGCTAGTGAATTTATTG 59.407 37.037 30.48 30.48 36.46 1.90
5965 6924 6.060028 TCCATTCGCTAGTGAATTTATTGC 57.940 37.500 25.40 0.00 36.46 3.56
5966 6925 5.588246 TCCATTCGCTAGTGAATTTATTGCA 59.412 36.000 25.40 2.72 36.46 4.08
5967 6926 6.262944 TCCATTCGCTAGTGAATTTATTGCAT 59.737 34.615 25.40 3.27 36.46 3.96
5968 6927 6.361481 CCATTCGCTAGTGAATTTATTGCATG 59.639 38.462 25.40 14.13 36.46 4.06
5969 6928 6.435430 TTCGCTAGTGAATTTATTGCATGT 57.565 33.333 14.70 0.00 0.00 3.21
5970 6929 6.048073 TCGCTAGTGAATTTATTGCATGTC 57.952 37.500 2.79 0.00 0.00 3.06
5971 6930 5.584251 TCGCTAGTGAATTTATTGCATGTCA 59.416 36.000 2.79 0.00 0.00 3.58
5972 6931 5.905733 CGCTAGTGAATTTATTGCATGTCAG 59.094 40.000 0.00 0.00 0.00 3.51
5973 6932 6.457392 CGCTAGTGAATTTATTGCATGTCAGT 60.457 38.462 0.00 0.00 0.00 3.41
5974 6933 7.253422 GCTAGTGAATTTATTGCATGTCAGTT 58.747 34.615 0.00 0.00 0.00 3.16
5975 6934 7.756722 GCTAGTGAATTTATTGCATGTCAGTTT 59.243 33.333 0.00 0.00 0.00 2.66
5976 6935 9.282247 CTAGTGAATTTATTGCATGTCAGTTTC 57.718 33.333 0.00 0.00 0.00 2.78
5977 6936 7.092716 AGTGAATTTATTGCATGTCAGTTTCC 58.907 34.615 0.00 0.00 0.00 3.13
5978 6937 7.039504 AGTGAATTTATTGCATGTCAGTTTCCT 60.040 33.333 0.00 0.00 0.00 3.36
5979 6938 7.599998 GTGAATTTATTGCATGTCAGTTTCCTT 59.400 33.333 0.00 0.00 0.00 3.36
5980 6939 7.599621 TGAATTTATTGCATGTCAGTTTCCTTG 59.400 33.333 0.00 0.00 0.00 3.61
5981 6940 2.798976 TTGCATGTCAGTTTCCTTGC 57.201 45.000 0.00 0.00 33.66 4.01
5982 6941 0.961019 TGCATGTCAGTTTCCTTGCC 59.039 50.000 0.00 0.00 32.48 4.52
5983 6942 0.961019 GCATGTCAGTTTCCTTGCCA 59.039 50.000 0.00 0.00 0.00 4.92
5984 6943 1.547372 GCATGTCAGTTTCCTTGCCAT 59.453 47.619 0.00 0.00 0.00 4.40
5985 6944 2.416431 GCATGTCAGTTTCCTTGCCATC 60.416 50.000 0.00 0.00 0.00 3.51
5986 6945 2.655090 TGTCAGTTTCCTTGCCATCA 57.345 45.000 0.00 0.00 0.00 3.07
5987 6946 2.942804 TGTCAGTTTCCTTGCCATCAA 58.057 42.857 0.00 0.00 0.00 2.57
5988 6947 3.295093 TGTCAGTTTCCTTGCCATCAAA 58.705 40.909 0.00 0.00 0.00 2.69
5989 6948 3.318839 TGTCAGTTTCCTTGCCATCAAAG 59.681 43.478 0.00 0.00 0.00 2.77
5990 6949 2.297033 TCAGTTTCCTTGCCATCAAAGC 59.703 45.455 0.00 0.00 0.00 3.51
5991 6950 2.036217 CAGTTTCCTTGCCATCAAAGCA 59.964 45.455 0.00 0.00 38.81 3.91
5992 6951 2.298163 AGTTTCCTTGCCATCAAAGCAG 59.702 45.455 0.00 0.00 42.17 4.24
5993 6952 1.259609 TTCCTTGCCATCAAAGCAGG 58.740 50.000 0.00 0.00 42.17 4.85
5995 6954 1.895238 CTTGCCATCAAAGCAGGGG 59.105 57.895 0.00 0.00 42.17 4.79
5996 6955 2.234913 CTTGCCATCAAAGCAGGGGC 62.235 60.000 0.00 0.00 42.17 5.80
5997 6956 2.681064 GCCATCAAAGCAGGGGCA 60.681 61.111 0.00 0.00 44.01 5.36
5998 6957 2.285024 GCCATCAAAGCAGGGGCAA 61.285 57.895 0.00 0.00 44.01 4.52
5999 6958 1.829523 GCCATCAAAGCAGGGGCAAA 61.830 55.000 0.00 0.00 44.01 3.68
6000 6959 0.686224 CCATCAAAGCAGGGGCAAAA 59.314 50.000 0.00 0.00 44.61 2.44
6001 6960 1.608801 CCATCAAAGCAGGGGCAAAAC 60.609 52.381 0.00 0.00 44.61 2.43
6002 6961 1.070445 CATCAAAGCAGGGGCAAAACA 59.930 47.619 0.00 0.00 44.61 2.83
6003 6962 0.752054 TCAAAGCAGGGGCAAAACAG 59.248 50.000 0.00 0.00 44.61 3.16
6004 6963 0.465287 CAAAGCAGGGGCAAAACAGT 59.535 50.000 0.00 0.00 44.61 3.55
6005 6964 0.752658 AAAGCAGGGGCAAAACAGTC 59.247 50.000 0.00 0.00 44.61 3.51
6006 6965 0.106015 AAGCAGGGGCAAAACAGTCT 60.106 50.000 0.00 0.00 44.61 3.24
6007 6966 0.771127 AGCAGGGGCAAAACAGTCTA 59.229 50.000 0.00 0.00 44.61 2.59
6008 6967 1.144913 AGCAGGGGCAAAACAGTCTAA 59.855 47.619 0.00 0.00 44.61 2.10
6009 6968 1.960689 GCAGGGGCAAAACAGTCTAAA 59.039 47.619 0.00 0.00 40.72 1.85
6010 6969 2.364002 GCAGGGGCAAAACAGTCTAAAA 59.636 45.455 0.00 0.00 40.72 1.52
6011 6970 3.181470 GCAGGGGCAAAACAGTCTAAAAA 60.181 43.478 0.00 0.00 40.72 1.94
6028 6987 1.942776 AAAAAGCCCAGCTATTGCCT 58.057 45.000 0.00 0.00 38.25 4.75
6029 6988 1.478631 AAAAGCCCAGCTATTGCCTC 58.521 50.000 0.00 0.00 38.25 4.70
6030 6989 0.396278 AAAGCCCAGCTATTGCCTCC 60.396 55.000 0.00 0.00 38.25 4.30
6031 6990 1.284841 AAGCCCAGCTATTGCCTCCT 61.285 55.000 0.00 0.00 38.25 3.69
6032 6991 1.228510 GCCCAGCTATTGCCTCCTT 59.771 57.895 0.00 0.00 40.80 3.36
6033 6992 1.105759 GCCCAGCTATTGCCTCCTTG 61.106 60.000 0.00 0.00 40.80 3.61
6034 6993 0.466922 CCCAGCTATTGCCTCCTTGG 60.467 60.000 0.00 0.00 40.80 3.61
6035 6994 0.257039 CCAGCTATTGCCTCCTTGGT 59.743 55.000 0.00 0.00 40.80 3.67
6036 6995 1.490490 CCAGCTATTGCCTCCTTGGTA 59.510 52.381 0.00 0.00 40.80 3.25
6037 6996 2.107204 CCAGCTATTGCCTCCTTGGTAT 59.893 50.000 0.00 0.00 40.80 2.73
6038 6997 3.144506 CAGCTATTGCCTCCTTGGTATG 58.855 50.000 0.00 0.00 40.80 2.39
6039 6998 1.882623 GCTATTGCCTCCTTGGTATGC 59.117 52.381 0.00 0.00 38.35 3.14
6040 6999 2.146342 CTATTGCCTCCTTGGTATGCG 58.854 52.381 0.00 0.00 38.35 4.73
6041 7000 0.466189 ATTGCCTCCTTGGTATGCGG 60.466 55.000 0.00 0.00 38.35 5.69
6042 7001 2.203209 GCCTCCTTGGTATGCGGG 60.203 66.667 0.00 0.00 38.35 6.13
6043 7002 2.203209 CCTCCTTGGTATGCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
6044 7003 2.746375 CCTCCTTGGTATGCGGGCT 61.746 63.158 0.00 0.00 0.00 5.19
6045 7004 1.524621 CTCCTTGGTATGCGGGCTG 60.525 63.158 0.00 0.00 0.00 4.85
6046 7005 2.516930 CCTTGGTATGCGGGCTGG 60.517 66.667 0.00 0.00 0.00 4.85
6047 7006 2.272146 CTTGGTATGCGGGCTGGT 59.728 61.111 0.00 0.00 0.00 4.00
6048 7007 1.378514 CTTGGTATGCGGGCTGGTT 60.379 57.895 0.00 0.00 0.00 3.67
6049 7008 1.376609 CTTGGTATGCGGGCTGGTTC 61.377 60.000 0.00 0.00 0.00 3.62
6050 7009 1.847798 TTGGTATGCGGGCTGGTTCT 61.848 55.000 0.00 0.00 0.00 3.01
6051 7010 1.077716 GGTATGCGGGCTGGTTCTT 60.078 57.895 0.00 0.00 0.00 2.52
6052 7011 0.179468 GGTATGCGGGCTGGTTCTTA 59.821 55.000 0.00 0.00 0.00 2.10
6053 7012 1.202770 GGTATGCGGGCTGGTTCTTAT 60.203 52.381 0.00 0.00 0.00 1.73
6054 7013 1.873591 GTATGCGGGCTGGTTCTTATG 59.126 52.381 0.00 0.00 0.00 1.90
6055 7014 1.103398 ATGCGGGCTGGTTCTTATGC 61.103 55.000 0.00 0.00 0.00 3.14
6056 7015 1.748879 GCGGGCTGGTTCTTATGCA 60.749 57.895 0.00 0.00 0.00 3.96
6057 7016 1.993369 GCGGGCTGGTTCTTATGCAC 61.993 60.000 0.00 0.00 0.00 4.57
6058 7017 0.676466 CGGGCTGGTTCTTATGCACA 60.676 55.000 0.00 0.00 0.00 4.57
6059 7018 1.098050 GGGCTGGTTCTTATGCACAG 58.902 55.000 0.00 0.00 0.00 3.66
6060 7019 1.340017 GGGCTGGTTCTTATGCACAGA 60.340 52.381 2.66 0.00 0.00 3.41
6061 7020 2.012673 GGCTGGTTCTTATGCACAGAG 58.987 52.381 2.66 0.00 0.00 3.35
6062 7021 2.355108 GGCTGGTTCTTATGCACAGAGA 60.355 50.000 2.66 0.00 0.00 3.10
6063 7022 3.338249 GCTGGTTCTTATGCACAGAGAA 58.662 45.455 2.66 3.71 0.00 2.87
6064 7023 3.753272 GCTGGTTCTTATGCACAGAGAAA 59.247 43.478 9.13 0.00 31.79 2.52
6065 7024 4.216257 GCTGGTTCTTATGCACAGAGAAAA 59.784 41.667 9.13 2.54 31.79 2.29
6066 7025 5.278463 GCTGGTTCTTATGCACAGAGAAAAA 60.278 40.000 9.13 2.27 31.79 1.94
6082 7041 1.739067 AAAAAGAATCGGAGCCTCGG 58.261 50.000 0.00 0.00 0.00 4.63
6083 7042 0.902531 AAAAGAATCGGAGCCTCGGA 59.097 50.000 4.31 4.31 0.00 4.55
6084 7043 0.461961 AAAGAATCGGAGCCTCGGAG 59.538 55.000 8.04 0.00 0.00 4.63
6085 7044 1.395826 AAGAATCGGAGCCTCGGAGG 61.396 60.000 19.95 19.95 38.80 4.30
6086 7045 2.840102 AATCGGAGCCTCGGAGGG 60.840 66.667 24.81 8.80 35.37 4.30
6087 7046 3.375443 AATCGGAGCCTCGGAGGGA 62.375 63.158 24.81 13.85 35.37 4.20
6088 7047 3.801068 ATCGGAGCCTCGGAGGGAG 62.801 68.421 24.81 0.70 42.75 4.30
6282 7617 4.275810 ACTTTATGTGAGTACCGCCTCTA 58.724 43.478 0.00 0.00 32.50 2.43
6628 7963 8.902806 AGATGACTCTAATAAGACTTGTCTCTG 58.097 37.037 3.58 0.00 29.88 3.35
6902 8237 2.792500 CACCAAGGTGCACTCAACA 58.208 52.632 17.98 0.00 39.39 3.33
7297 8680 0.387622 CCGTGCATTTGGCTTCAGTG 60.388 55.000 0.00 0.00 45.15 3.66
7474 8866 8.876303 TCAGATGATGTTATCTAGTAGCATCT 57.124 34.615 19.57 14.14 45.80 2.90
7700 9117 8.229137 GCAAGATATTTCTCAGATATGTTGAGC 58.771 37.037 14.43 1.52 40.45 4.26
7720 9137 4.848357 AGCTGATTACAGTGGTTTAGCAT 58.152 39.130 0.00 0.00 45.04 3.79
7750 9167 6.748333 AATATATATGCAGTGGATGTGTGC 57.252 37.500 7.49 0.00 37.73 4.57
7767 9184 2.325218 GCCCTCTGCATCCGATTTC 58.675 57.895 0.00 0.00 40.77 2.17
8055 9537 5.234543 AGTCTTTCAACTGCTCGTTTCTTAC 59.765 40.000 0.00 0.00 32.27 2.34
8136 9623 2.461300 TCCTCTTGTCCATCGATCCT 57.539 50.000 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 6.072286 GGATTGAAATCAGAAAGACAAGCTCA 60.072 38.462 5.46 0.00 37.15 4.26
23 24 8.108551 AGAAGGATTGAAATCAGAAAGACAAG 57.891 34.615 5.46 0.00 37.15 3.16
33 34 5.879763 TGGACTCAAGAAGGATTGAAATCA 58.120 37.500 5.46 0.00 38.66 2.57
46 47 1.186200 CCAGACGGATGGACTCAAGA 58.814 55.000 2.10 0.00 43.57 3.02
86 87 1.588861 GAAGACGGCAAGAATCTACGC 59.411 52.381 0.00 0.00 0.00 4.42
107 108 4.444838 TAACCTCGCGCGCACCAT 62.445 61.111 32.61 14.94 0.00 3.55
115 116 1.067354 ACAGTAAACCCTAACCTCGCG 60.067 52.381 0.00 0.00 0.00 5.87
118 119 4.935808 CACATGACAGTAAACCCTAACCTC 59.064 45.833 0.00 0.00 0.00 3.85
132 133 3.189910 CACCAAATCTCACCACATGACAG 59.810 47.826 0.00 0.00 32.37 3.51
140 141 1.545428 GCCTGACACCAAATCTCACCA 60.545 52.381 0.00 0.00 0.00 4.17
161 162 4.394300 AGAACACTTGCATACATCTGAAGC 59.606 41.667 0.00 0.00 0.00 3.86
225 226 6.488006 ACAGTCAAATAGTCTTCATGCACTTT 59.512 34.615 0.00 0.00 0.00 2.66
227 228 5.555017 ACAGTCAAATAGTCTTCATGCACT 58.445 37.500 0.00 0.00 0.00 4.40
243 244 2.628178 AGACCTTGTCGATGACAGTCAA 59.372 45.455 7.50 0.00 43.69 3.18
244 245 2.239400 AGACCTTGTCGATGACAGTCA 58.761 47.619 5.50 5.50 43.69 3.41
261 262 5.010213 CCCTTATACCAGAGTCAGCTTAGAC 59.990 48.000 0.00 0.00 38.81 2.59
292 293 3.173599 CGAGCCGATAACACGTCTTTTA 58.826 45.455 0.00 0.00 0.00 1.52
319 320 1.471287 TCGAATGACCAGTACTGACGG 59.529 52.381 24.68 10.34 0.00 4.79
330 331 7.973388 TCAAAATTATGAAACCATCGAATGACC 59.027 33.333 0.00 0.00 0.00 4.02
463 473 0.930726 AGGTTGGTTTTGTCTCCCCA 59.069 50.000 0.00 0.00 0.00 4.96
523 794 6.350629 TGATCTGAGTATGTATGTGGGATG 57.649 41.667 0.00 0.00 0.00 3.51
524 795 5.046735 GCTGATCTGAGTATGTATGTGGGAT 60.047 44.000 3.42 0.00 0.00 3.85
539 810 2.440247 TCGGAGCGGCTGATCTGA 60.440 61.111 18.32 18.32 43.36 3.27
679 955 2.484947 GGAGCTGGAGGTTATAAACGGG 60.485 54.545 0.00 0.00 0.00 5.28
1152 1428 1.521457 GCAATGATCTCCGCGACCA 60.521 57.895 8.23 0.00 0.00 4.02
1193 1469 1.247567 CAAAAGAGCAACCATCCCGT 58.752 50.000 0.00 0.00 0.00 5.28
1287 1563 3.826524 TCTGGTACAAAAGCCACAATCA 58.173 40.909 0.00 0.00 38.70 2.57
1293 1569 1.448985 GCGATCTGGTACAAAAGCCA 58.551 50.000 0.00 0.00 38.70 4.75
1381 1657 3.072038 CCCTGCTGATCTGTCCAATATCA 59.928 47.826 1.27 0.00 0.00 2.15
1452 1728 3.990469 GTCATAGCACGGATGGTATCTTG 59.010 47.826 0.00 0.00 44.45 3.02
1499 1775 2.306847 ACCAAGGTGAACAATGTGTCC 58.693 47.619 0.00 0.00 0.00 4.02
1630 1906 3.458189 AGAGGAAACAAACGTCAGACAG 58.542 45.455 0.41 0.00 0.00 3.51
1714 1997 7.609146 TCATCATTTGCATCTCAAAGAACTACT 59.391 33.333 0.00 0.00 46.68 2.57
2032 2508 2.030363 GCATCAACGTCCATTGGTTCAA 60.030 45.455 1.86 0.00 0.00 2.69
2244 2720 0.457035 TACGGGTCAACGCCTATCAC 59.543 55.000 0.00 0.00 37.37 3.06
2252 2728 1.931172 CTAAATGGCTACGGGTCAACG 59.069 52.381 0.00 0.00 40.31 4.10
2934 3632 1.878953 CTTCGGCGCCTAATATTGGT 58.121 50.000 26.68 0.00 0.00 3.67
2990 3688 1.102154 TAACATCGCATTGCAAGGGG 58.898 50.000 20.68 20.68 0.00 4.79
3079 3801 3.006110 CCTCACCAATGCTTCAACATGTT 59.994 43.478 4.92 4.92 0.00 2.71
3156 3878 1.501170 TCCAAAGTTTGTGGGATCCCA 59.499 47.619 30.62 30.62 45.02 4.37
3169 3891 1.151450 CAGTGCCCACCTCCAAAGT 59.849 57.895 0.00 0.00 0.00 2.66
3275 3997 3.807622 TGACAACAGTTTTAAGCGAGAGG 59.192 43.478 0.00 0.00 0.00 3.69
3396 4118 1.526917 GTCAGCCACAAGTGCCAGT 60.527 57.895 0.00 0.00 0.00 4.00
3516 4241 5.310451 GGTAATAACAGAAACTCCCACACA 58.690 41.667 0.00 0.00 0.00 3.72
3578 4303 8.291740 TGTAATCATGCCATCAATTTAGATTCG 58.708 33.333 0.00 0.00 0.00 3.34
3946 4672 2.288729 CACAGAATATGCATCCACCACG 59.711 50.000 0.19 0.00 0.00 4.94
4007 4734 4.497291 ACACCTGACTAAAACCTCAACA 57.503 40.909 0.00 0.00 0.00 3.33
4050 4778 5.779922 AGCGAGTTTCACACATAAGACTAA 58.220 37.500 0.00 0.00 0.00 2.24
4051 4779 5.386958 AGCGAGTTTCACACATAAGACTA 57.613 39.130 0.00 0.00 0.00 2.59
4109 4837 6.183360 TGGTTATGTCAACCATTCATCATTCG 60.183 38.462 4.77 0.00 44.74 3.34
4399 5168 7.550551 AGAGTACTGTCATCATGTGGTTAAATG 59.449 37.037 0.00 0.00 0.00 2.32
4461 5230 9.740239 GCAAAGATATTGATTCTTCATAGCAAA 57.260 29.630 0.00 0.00 32.33 3.68
4474 5243 9.236006 AGAACTTAACTGTGCAAAGATATTGAT 57.764 29.630 11.93 0.00 0.00 2.57
4656 5425 4.100084 TGTCAGGCTGATGGGGCG 62.100 66.667 21.84 0.00 36.85 6.13
4669 5438 1.349234 CAGCACATCGATTCGTGTCA 58.651 50.000 15.06 0.00 35.51 3.58
4731 5500 1.073025 TGCGGAACAGGTCATGCTT 59.927 52.632 3.82 0.00 32.06 3.91
4784 5553 1.339631 CCACAAAACCGAGGCATCCTA 60.340 52.381 0.00 0.00 31.76 2.94
4833 5602 0.388907 GTGTCGTAAAGCCAGCCGTA 60.389 55.000 0.00 0.00 0.00 4.02
4834 5603 1.666872 GTGTCGTAAAGCCAGCCGT 60.667 57.895 0.00 0.00 0.00 5.68
4942 5717 2.163613 TCGAACTCGATAAGCAGCTTCA 59.836 45.455 12.07 0.00 44.22 3.02
4999 5774 3.706373 CCCTGCTACACCACGGCT 61.706 66.667 0.00 0.00 0.00 5.52
5039 5814 4.323477 GTACACACCGGGGCAGCA 62.323 66.667 1.73 0.00 0.00 4.41
5134 5909 2.035626 GTGGGGGCAAGCTTAGCA 59.964 61.111 18.36 0.59 0.00 3.49
5272 6200 0.748729 ATCCTCACCTCGTCGGAGTC 60.749 60.000 0.00 0.00 38.70 3.36
5355 6283 2.665000 GCTCCTACAGGCAGCACA 59.335 61.111 12.18 0.00 37.88 4.57
5376 6304 1.264749 ACCATCTAGGGCAGCACGAA 61.265 55.000 0.00 0.00 43.89 3.85
5453 6411 4.563184 GTGATGATCGTTTAGTTCTTCGCT 59.437 41.667 0.00 0.00 33.78 4.93
5565 6523 7.800300 AACTAAATAACTTCCCACTCTCTCT 57.200 36.000 0.00 0.00 0.00 3.10
5588 6546 7.205297 CCATCAGCTCAAAAGAAGAAGAAAAA 58.795 34.615 0.00 0.00 0.00 1.94
5616 6575 0.967662 CATGGACACAAATGCCCACA 59.032 50.000 0.00 0.00 0.00 4.17
5713 6672 7.386851 CAGACAAAATAGAAACAGAGGGAGTA 58.613 38.462 0.00 0.00 0.00 2.59
5714 6673 6.234177 CAGACAAAATAGAAACAGAGGGAGT 58.766 40.000 0.00 0.00 0.00 3.85
5715 6674 5.123027 GCAGACAAAATAGAAACAGAGGGAG 59.877 44.000 0.00 0.00 0.00 4.30
5716 6675 5.003804 GCAGACAAAATAGAAACAGAGGGA 58.996 41.667 0.00 0.00 0.00 4.20
5717 6676 4.142816 CGCAGACAAAATAGAAACAGAGGG 60.143 45.833 0.00 0.00 0.00 4.30
5718 6677 4.452455 ACGCAGACAAAATAGAAACAGAGG 59.548 41.667 0.00 0.00 0.00 3.69
5719 6678 5.597813 ACGCAGACAAAATAGAAACAGAG 57.402 39.130 0.00 0.00 0.00 3.35
5720 6679 8.766000 TTATACGCAGACAAAATAGAAACAGA 57.234 30.769 0.00 0.00 0.00 3.41
5721 6680 8.656849 ACTTATACGCAGACAAAATAGAAACAG 58.343 33.333 0.00 0.00 0.00 3.16
5722 6681 8.542497 ACTTATACGCAGACAAAATAGAAACA 57.458 30.769 0.00 0.00 0.00 2.83
5723 6682 9.821662 AAACTTATACGCAGACAAAATAGAAAC 57.178 29.630 0.00 0.00 0.00 2.78
5726 6685 9.431887 AGAAAACTTATACGCAGACAAAATAGA 57.568 29.630 0.00 0.00 0.00 1.98
5727 6686 9.690434 GAGAAAACTTATACGCAGACAAAATAG 57.310 33.333 0.00 0.00 0.00 1.73
5728 6687 9.210329 TGAGAAAACTTATACGCAGACAAAATA 57.790 29.630 0.00 0.00 0.00 1.40
5729 6688 8.094798 TGAGAAAACTTATACGCAGACAAAAT 57.905 30.769 0.00 0.00 0.00 1.82
5730 6689 7.225931 ACTGAGAAAACTTATACGCAGACAAAA 59.774 33.333 0.00 0.00 35.05 2.44
5731 6690 6.704493 ACTGAGAAAACTTATACGCAGACAAA 59.296 34.615 0.00 0.00 35.05 2.83
5732 6691 6.220930 ACTGAGAAAACTTATACGCAGACAA 58.779 36.000 0.00 0.00 35.05 3.18
5733 6692 5.779922 ACTGAGAAAACTTATACGCAGACA 58.220 37.500 0.00 0.00 35.05 3.41
5734 6693 6.707599 AACTGAGAAAACTTATACGCAGAC 57.292 37.500 0.00 0.00 35.05 3.51
5735 6694 7.724305 AAAACTGAGAAAACTTATACGCAGA 57.276 32.000 0.00 0.00 35.05 4.26
5764 6723 0.727398 GGGAACACGCAGACTATTGC 59.273 55.000 0.00 0.00 40.67 3.56
5765 6724 2.386661 AGGGAACACGCAGACTATTG 57.613 50.000 0.00 0.00 0.00 1.90
5766 6725 2.567615 AGAAGGGAACACGCAGACTATT 59.432 45.455 0.00 0.00 0.00 1.73
5767 6726 2.180276 AGAAGGGAACACGCAGACTAT 58.820 47.619 0.00 0.00 0.00 2.12
5768 6727 1.629043 AGAAGGGAACACGCAGACTA 58.371 50.000 0.00 0.00 0.00 2.59
5769 6728 0.759346 AAGAAGGGAACACGCAGACT 59.241 50.000 0.00 0.00 0.00 3.24
5770 6729 1.594331 AAAGAAGGGAACACGCAGAC 58.406 50.000 0.00 0.00 0.00 3.51
5771 6730 2.341846 AAAAGAAGGGAACACGCAGA 57.658 45.000 0.00 0.00 0.00 4.26
5772 6731 2.095718 GCTAAAAGAAGGGAACACGCAG 60.096 50.000 0.00 0.00 0.00 5.18
5773 6732 1.877443 GCTAAAAGAAGGGAACACGCA 59.123 47.619 0.00 0.00 0.00 5.24
5774 6733 1.199327 GGCTAAAAGAAGGGAACACGC 59.801 52.381 0.00 0.00 0.00 5.34
5775 6734 1.810755 GGGCTAAAAGAAGGGAACACG 59.189 52.381 0.00 0.00 0.00 4.49
5776 6735 3.082548 GAGGGCTAAAAGAAGGGAACAC 58.917 50.000 0.00 0.00 0.00 3.32
5777 6736 2.986728 AGAGGGCTAAAAGAAGGGAACA 59.013 45.455 0.00 0.00 0.00 3.18
5778 6737 3.264706 AGAGAGGGCTAAAAGAAGGGAAC 59.735 47.826 0.00 0.00 0.00 3.62
5779 6738 3.532102 AGAGAGGGCTAAAAGAAGGGAA 58.468 45.455 0.00 0.00 0.00 3.97
5780 6739 3.207044 AGAGAGGGCTAAAAGAAGGGA 57.793 47.619 0.00 0.00 0.00 4.20
5781 6740 3.371059 GGAAGAGAGGGCTAAAAGAAGGG 60.371 52.174 0.00 0.00 0.00 3.95
5782 6741 3.371059 GGGAAGAGAGGGCTAAAAGAAGG 60.371 52.174 0.00 0.00 0.00 3.46
5783 6742 3.264450 TGGGAAGAGAGGGCTAAAAGAAG 59.736 47.826 0.00 0.00 0.00 2.85
5784 6743 3.256704 TGGGAAGAGAGGGCTAAAAGAA 58.743 45.455 0.00 0.00 0.00 2.52
5785 6744 2.915869 TGGGAAGAGAGGGCTAAAAGA 58.084 47.619 0.00 0.00 0.00 2.52
5786 6745 3.549794 CATGGGAAGAGAGGGCTAAAAG 58.450 50.000 0.00 0.00 0.00 2.27
5787 6746 2.357154 GCATGGGAAGAGAGGGCTAAAA 60.357 50.000 0.00 0.00 0.00 1.52
5788 6747 1.212935 GCATGGGAAGAGAGGGCTAAA 59.787 52.381 0.00 0.00 0.00 1.85
5789 6748 0.839946 GCATGGGAAGAGAGGGCTAA 59.160 55.000 0.00 0.00 0.00 3.09
5790 6749 0.030705 AGCATGGGAAGAGAGGGCTA 60.031 55.000 0.00 0.00 0.00 3.93
5791 6750 1.307691 AGCATGGGAAGAGAGGGCT 60.308 57.895 0.00 0.00 0.00 5.19
5792 6751 1.153005 CAGCATGGGAAGAGAGGGC 60.153 63.158 0.00 0.00 0.00 5.19
5793 6752 1.153005 GCAGCATGGGAAGAGAGGG 60.153 63.158 0.00 0.00 35.86 4.30
5794 6753 1.153005 GGCAGCATGGGAAGAGAGG 60.153 63.158 0.00 0.00 35.86 3.69
5795 6754 1.153005 GGGCAGCATGGGAAGAGAG 60.153 63.158 0.00 0.00 35.86 3.20
5796 6755 2.683465 GGGGCAGCATGGGAAGAGA 61.683 63.158 0.00 0.00 35.86 3.10
5797 6756 2.123982 GGGGCAGCATGGGAAGAG 60.124 66.667 0.00 0.00 35.86 2.85
5798 6757 2.614969 AGGGGCAGCATGGGAAGA 60.615 61.111 0.00 0.00 35.86 2.87
5799 6758 1.348008 TAGAGGGGCAGCATGGGAAG 61.348 60.000 0.00 0.00 35.86 3.46
5800 6759 0.698886 ATAGAGGGGCAGCATGGGAA 60.699 55.000 0.00 0.00 35.86 3.97
5801 6760 0.698886 AATAGAGGGGCAGCATGGGA 60.699 55.000 0.00 0.00 35.86 4.37
5802 6761 0.251077 GAATAGAGGGGCAGCATGGG 60.251 60.000 0.00 0.00 35.86 4.00
5803 6762 0.251077 GGAATAGAGGGGCAGCATGG 60.251 60.000 0.00 0.00 35.86 3.66
5804 6763 0.604780 CGGAATAGAGGGGCAGCATG 60.605 60.000 0.00 0.00 40.87 4.06
5805 6764 1.757306 CGGAATAGAGGGGCAGCAT 59.243 57.895 0.00 0.00 0.00 3.79
5806 6765 3.106986 GCGGAATAGAGGGGCAGCA 62.107 63.158 0.00 0.00 0.00 4.41
5807 6766 2.281139 GCGGAATAGAGGGGCAGC 60.281 66.667 0.00 0.00 0.00 5.25
5808 6767 0.181350 AAAGCGGAATAGAGGGGCAG 59.819 55.000 0.00 0.00 0.00 4.85
5809 6768 0.623723 AAAAGCGGAATAGAGGGGCA 59.376 50.000 0.00 0.00 0.00 5.36
5810 6769 1.309950 GAAAAGCGGAATAGAGGGGC 58.690 55.000 0.00 0.00 0.00 5.80
5811 6770 1.477014 GGGAAAAGCGGAATAGAGGGG 60.477 57.143 0.00 0.00 0.00 4.79
5812 6771 1.477014 GGGGAAAAGCGGAATAGAGGG 60.477 57.143 0.00 0.00 0.00 4.30
5813 6772 1.810412 CGGGGAAAAGCGGAATAGAGG 60.810 57.143 0.00 0.00 0.00 3.69
5814 6773 1.134491 ACGGGGAAAAGCGGAATAGAG 60.134 52.381 0.00 0.00 0.00 2.43
5815 6774 0.906775 ACGGGGAAAAGCGGAATAGA 59.093 50.000 0.00 0.00 0.00 1.98
5816 6775 1.134491 AGACGGGGAAAAGCGGAATAG 60.134 52.381 0.00 0.00 0.00 1.73
5817 6776 0.906775 AGACGGGGAAAAGCGGAATA 59.093 50.000 0.00 0.00 0.00 1.75
5818 6777 0.906775 TAGACGGGGAAAAGCGGAAT 59.093 50.000 0.00 0.00 0.00 3.01
5819 6778 0.686224 TTAGACGGGGAAAAGCGGAA 59.314 50.000 0.00 0.00 0.00 4.30
5820 6779 0.906775 ATTAGACGGGGAAAAGCGGA 59.093 50.000 0.00 0.00 0.00 5.54
5821 6780 1.296727 GATTAGACGGGGAAAAGCGG 58.703 55.000 0.00 0.00 0.00 5.52
5822 6781 1.296727 GGATTAGACGGGGAAAAGCG 58.703 55.000 0.00 0.00 0.00 4.68
5823 6782 1.296727 CGGATTAGACGGGGAAAAGC 58.703 55.000 0.00 0.00 0.00 3.51
5824 6783 1.134491 AGCGGATTAGACGGGGAAAAG 60.134 52.381 0.00 0.00 0.00 2.27
5825 6784 0.906775 AGCGGATTAGACGGGGAAAA 59.093 50.000 0.00 0.00 0.00 2.29
5826 6785 0.177141 CAGCGGATTAGACGGGGAAA 59.823 55.000 0.00 0.00 0.00 3.13
5827 6786 1.820581 CAGCGGATTAGACGGGGAA 59.179 57.895 0.00 0.00 0.00 3.97
5828 6787 2.792947 GCAGCGGATTAGACGGGGA 61.793 63.158 0.00 0.00 0.00 4.81
5829 6788 2.280186 GCAGCGGATTAGACGGGG 60.280 66.667 0.00 0.00 0.00 5.73
5830 6789 1.069765 ATGCAGCGGATTAGACGGG 59.930 57.895 0.00 0.00 0.00 5.28
5831 6790 1.835483 GCATGCAGCGGATTAGACGG 61.835 60.000 14.21 0.00 0.00 4.79
5832 6791 1.566563 GCATGCAGCGGATTAGACG 59.433 57.895 14.21 0.00 0.00 4.18
5842 6801 0.597637 GATTGGCTCATGCATGCAGC 60.598 55.000 28.42 28.42 45.96 5.25
5843 6802 0.032130 GGATTGGCTCATGCATGCAG 59.968 55.000 26.69 19.08 41.91 4.41
5844 6803 1.730451 CGGATTGGCTCATGCATGCA 61.730 55.000 25.04 25.04 41.91 3.96
5845 6804 1.007734 CGGATTGGCTCATGCATGC 60.008 57.895 22.25 11.82 41.91 4.06
5846 6805 0.742505 AACGGATTGGCTCATGCATG 59.257 50.000 21.07 21.07 41.91 4.06
5847 6806 0.742505 CAACGGATTGGCTCATGCAT 59.257 50.000 0.00 0.00 41.91 3.96
5848 6807 1.936436 GCAACGGATTGGCTCATGCA 61.936 55.000 0.00 0.00 41.91 3.96
5849 6808 1.226773 GCAACGGATTGGCTCATGC 60.227 57.895 0.00 0.00 36.23 4.06
5850 6809 0.742505 ATGCAACGGATTGGCTCATG 59.257 50.000 0.00 0.00 36.23 3.07
5851 6810 0.742505 CATGCAACGGATTGGCTCAT 59.257 50.000 0.00 0.00 36.23 2.90
5852 6811 0.608856 ACATGCAACGGATTGGCTCA 60.609 50.000 0.00 0.00 36.23 4.26
5853 6812 0.527565 AACATGCAACGGATTGGCTC 59.472 50.000 0.00 0.00 36.23 4.70
5854 6813 0.968405 AAACATGCAACGGATTGGCT 59.032 45.000 0.00 0.00 36.23 4.75
5855 6814 2.163412 TCTAAACATGCAACGGATTGGC 59.837 45.455 0.00 0.00 36.23 4.52
5856 6815 3.689161 TCTCTAAACATGCAACGGATTGG 59.311 43.478 0.00 0.00 36.23 3.16
5857 6816 4.631377 TCTCTCTAAACATGCAACGGATTG 59.369 41.667 0.00 0.00 38.99 2.67
5858 6817 4.832248 TCTCTCTAAACATGCAACGGATT 58.168 39.130 0.00 0.00 0.00 3.01
5859 6818 4.471904 TCTCTCTAAACATGCAACGGAT 57.528 40.909 0.00 0.00 0.00 4.18
5860 6819 3.953712 TCTCTCTAAACATGCAACGGA 57.046 42.857 0.00 0.00 0.00 4.69
5861 6820 4.452455 AGTTTCTCTCTAAACATGCAACGG 59.548 41.667 0.00 0.00 40.97 4.44
5862 6821 5.597813 AGTTTCTCTCTAAACATGCAACG 57.402 39.130 0.00 0.00 40.97 4.10
5863 6822 7.360438 CCACTAGTTTCTCTCTAAACATGCAAC 60.360 40.741 0.00 0.00 40.97 4.17
5864 6823 6.650807 CCACTAGTTTCTCTCTAAACATGCAA 59.349 38.462 0.00 0.00 40.97 4.08
5865 6824 6.166279 CCACTAGTTTCTCTCTAAACATGCA 58.834 40.000 0.00 0.00 40.97 3.96
5866 6825 5.582665 CCCACTAGTTTCTCTCTAAACATGC 59.417 44.000 0.00 0.00 40.97 4.06
5867 6826 5.582665 GCCCACTAGTTTCTCTCTAAACATG 59.417 44.000 0.00 0.00 40.97 3.21
5868 6827 5.248477 TGCCCACTAGTTTCTCTCTAAACAT 59.752 40.000 0.00 0.00 40.97 2.71
5869 6828 4.591498 TGCCCACTAGTTTCTCTCTAAACA 59.409 41.667 0.00 0.00 40.97 2.83
5870 6829 5.148651 TGCCCACTAGTTTCTCTCTAAAC 57.851 43.478 0.00 0.00 39.22 2.01
5871 6830 5.818678 TTGCCCACTAGTTTCTCTCTAAA 57.181 39.130 0.00 0.00 0.00 1.85
5872 6831 5.104900 GGATTGCCCACTAGTTTCTCTCTAA 60.105 44.000 0.00 0.00 34.14 2.10
5873 6832 4.406003 GGATTGCCCACTAGTTTCTCTCTA 59.594 45.833 0.00 0.00 34.14 2.43
5874 6833 3.198853 GGATTGCCCACTAGTTTCTCTCT 59.801 47.826 0.00 0.00 34.14 3.10
5875 6834 3.055094 TGGATTGCCCACTAGTTTCTCTC 60.055 47.826 0.00 0.00 40.82 3.20
5876 6835 2.912956 TGGATTGCCCACTAGTTTCTCT 59.087 45.455 0.00 0.00 40.82 3.10
5877 6836 3.274288 CTGGATTGCCCACTAGTTTCTC 58.726 50.000 0.00 0.00 40.82 2.87
5878 6837 2.619074 GCTGGATTGCCCACTAGTTTCT 60.619 50.000 0.00 0.00 40.82 2.52
5879 6838 1.745653 GCTGGATTGCCCACTAGTTTC 59.254 52.381 0.00 0.00 40.82 2.78
5880 6839 1.839424 GCTGGATTGCCCACTAGTTT 58.161 50.000 0.00 0.00 40.82 2.66
5881 6840 0.392998 CGCTGGATTGCCCACTAGTT 60.393 55.000 0.00 0.00 40.82 2.24
5882 6841 1.221840 CGCTGGATTGCCCACTAGT 59.778 57.895 0.00 0.00 40.82 2.57
5883 6842 1.524621 CCGCTGGATTGCCCACTAG 60.525 63.158 0.00 0.00 40.82 2.57
5884 6843 2.589540 CCGCTGGATTGCCCACTA 59.410 61.111 0.00 0.00 40.82 2.74
5887 6846 4.445710 ATGCCGCTGGATTGCCCA 62.446 61.111 0.00 0.00 44.25 5.36
5888 6847 3.908081 CATGCCGCTGGATTGCCC 61.908 66.667 0.00 0.00 0.00 5.36
5889 6848 4.580551 GCATGCCGCTGGATTGCC 62.581 66.667 6.36 0.00 37.77 4.52
5890 6849 2.839043 TTTGCATGCCGCTGGATTGC 62.839 55.000 16.68 12.06 43.06 3.56
5891 6850 0.804544 CTTTGCATGCCGCTGGATTG 60.805 55.000 16.68 0.00 43.06 2.67
5892 6851 1.514087 CTTTGCATGCCGCTGGATT 59.486 52.632 16.68 0.00 43.06 3.01
5893 6852 3.072486 GCTTTGCATGCCGCTGGAT 62.072 57.895 16.68 0.00 43.06 3.41
5894 6853 3.751246 GCTTTGCATGCCGCTGGA 61.751 61.111 16.68 0.00 43.06 3.86
5901 6860 4.807039 CTGGCCCGCTTTGCATGC 62.807 66.667 11.82 11.82 0.00 4.06
5902 6861 4.137872 CCTGGCCCGCTTTGCATG 62.138 66.667 0.00 0.00 0.00 4.06
5916 6875 3.982316 TTCTCTGCATGCGCCCCTG 62.982 63.158 14.09 0.38 37.32 4.45
5917 6876 3.694058 CTTCTCTGCATGCGCCCCT 62.694 63.158 14.09 0.00 37.32 4.79
5918 6877 3.207669 CTTCTCTGCATGCGCCCC 61.208 66.667 14.09 0.00 37.32 5.80
5919 6878 3.207669 CCTTCTCTGCATGCGCCC 61.208 66.667 14.09 0.00 37.32 6.13
5920 6879 3.207669 CCCTTCTCTGCATGCGCC 61.208 66.667 14.09 0.00 37.32 6.53
5921 6880 3.885521 GCCCTTCTCTGCATGCGC 61.886 66.667 14.09 0.00 39.24 6.09
5922 6881 3.207669 GGCCCTTCTCTGCATGCG 61.208 66.667 14.09 8.20 0.00 4.73
5923 6882 1.041447 ATTGGCCCTTCTCTGCATGC 61.041 55.000 11.82 11.82 0.00 4.06
5924 6883 1.030457 GATTGGCCCTTCTCTGCATG 58.970 55.000 0.00 0.00 0.00 4.06
5925 6884 0.106318 GGATTGGCCCTTCTCTGCAT 60.106 55.000 0.00 0.00 0.00 3.96
5926 6885 1.304282 GGATTGGCCCTTCTCTGCA 59.696 57.895 0.00 0.00 0.00 4.41
5927 6886 0.106318 ATGGATTGGCCCTTCTCTGC 60.106 55.000 0.00 0.00 34.97 4.26
5928 6887 2.305009 GAATGGATTGGCCCTTCTCTG 58.695 52.381 0.00 0.00 38.03 3.35
5929 6888 1.133976 CGAATGGATTGGCCCTTCTCT 60.134 52.381 0.00 0.00 38.66 3.10
5930 6889 1.312815 CGAATGGATTGGCCCTTCTC 58.687 55.000 0.00 0.00 38.66 2.87
5931 6890 0.753111 GCGAATGGATTGGCCCTTCT 60.753 55.000 0.00 0.00 38.66 2.85
5932 6891 0.753111 AGCGAATGGATTGGCCCTTC 60.753 55.000 0.00 0.00 41.62 3.46
5933 6892 0.550914 TAGCGAATGGATTGGCCCTT 59.449 50.000 0.00 0.00 41.62 3.95
5934 6893 0.109342 CTAGCGAATGGATTGGCCCT 59.891 55.000 0.00 0.00 41.62 5.19
5935 6894 0.179018 ACTAGCGAATGGATTGGCCC 60.179 55.000 0.00 0.00 41.62 5.80
5936 6895 0.947244 CACTAGCGAATGGATTGGCC 59.053 55.000 0.00 0.00 41.62 5.36
5937 6896 1.953559 TCACTAGCGAATGGATTGGC 58.046 50.000 0.00 0.00 41.10 4.52
5938 6897 5.505173 AAATTCACTAGCGAATGGATTGG 57.495 39.130 6.75 0.00 35.77 3.16
5939 6898 7.113965 GCAATAAATTCACTAGCGAATGGATTG 59.886 37.037 22.14 22.14 39.05 2.67
5940 6899 7.141363 GCAATAAATTCACTAGCGAATGGATT 58.859 34.615 6.75 6.93 35.77 3.01
5941 6900 6.262944 TGCAATAAATTCACTAGCGAATGGAT 59.737 34.615 6.75 1.56 35.77 3.41
5942 6901 5.588246 TGCAATAAATTCACTAGCGAATGGA 59.412 36.000 6.75 0.00 35.77 3.41
5943 6902 5.820131 TGCAATAAATTCACTAGCGAATGG 58.180 37.500 6.75 0.00 35.77 3.16
5944 6903 6.914215 ACATGCAATAAATTCACTAGCGAATG 59.086 34.615 6.75 0.00 35.77 2.67
5945 6904 7.031226 ACATGCAATAAATTCACTAGCGAAT 57.969 32.000 0.00 0.00 37.20 3.34
5946 6905 6.093357 TGACATGCAATAAATTCACTAGCGAA 59.907 34.615 0.00 0.00 0.00 4.70
5947 6906 5.584251 TGACATGCAATAAATTCACTAGCGA 59.416 36.000 0.00 0.00 0.00 4.93
5948 6907 5.809464 TGACATGCAATAAATTCACTAGCG 58.191 37.500 0.00 0.00 0.00 4.26
5949 6908 6.789262 ACTGACATGCAATAAATTCACTAGC 58.211 36.000 0.00 0.00 0.00 3.42
5950 6909 9.282247 GAAACTGACATGCAATAAATTCACTAG 57.718 33.333 0.00 0.00 0.00 2.57
5951 6910 8.243426 GGAAACTGACATGCAATAAATTCACTA 58.757 33.333 0.00 0.00 0.00 2.74
5952 6911 7.039504 AGGAAACTGACATGCAATAAATTCACT 60.040 33.333 0.00 0.00 41.13 3.41
5953 6912 7.092716 AGGAAACTGACATGCAATAAATTCAC 58.907 34.615 0.00 0.00 41.13 3.18
5954 6913 7.230849 AGGAAACTGACATGCAATAAATTCA 57.769 32.000 0.00 0.00 41.13 2.57
5955 6914 7.412237 GCAAGGAAACTGACATGCAATAAATTC 60.412 37.037 0.00 0.00 42.68 2.17
5956 6915 6.369615 GCAAGGAAACTGACATGCAATAAATT 59.630 34.615 0.00 0.00 42.68 1.82
5957 6916 5.870978 GCAAGGAAACTGACATGCAATAAAT 59.129 36.000 0.00 0.00 42.68 1.40
5958 6917 5.229423 GCAAGGAAACTGACATGCAATAAA 58.771 37.500 0.00 0.00 42.68 1.40
5959 6918 4.321899 GGCAAGGAAACTGACATGCAATAA 60.322 41.667 0.00 0.00 42.68 1.40
5960 6919 3.193267 GGCAAGGAAACTGACATGCAATA 59.807 43.478 0.00 0.00 42.68 1.90
5961 6920 2.028748 GGCAAGGAAACTGACATGCAAT 60.029 45.455 0.00 0.00 42.68 3.56
5962 6921 1.340889 GGCAAGGAAACTGACATGCAA 59.659 47.619 0.00 0.00 42.68 4.08
5963 6922 0.961019 GGCAAGGAAACTGACATGCA 59.039 50.000 0.00 0.00 42.68 3.96
5964 6923 0.961019 TGGCAAGGAAACTGACATGC 59.039 50.000 0.00 0.00 42.68 4.06
5965 6924 2.821378 TGATGGCAAGGAAACTGACATG 59.179 45.455 0.00 0.00 42.68 3.21
5966 6925 3.159213 TGATGGCAAGGAAACTGACAT 57.841 42.857 0.00 0.00 42.68 3.06
5967 6926 2.655090 TGATGGCAAGGAAACTGACA 57.345 45.000 0.00 0.00 42.68 3.58
5968 6927 3.858503 GCTTTGATGGCAAGGAAACTGAC 60.859 47.826 0.00 0.00 42.68 3.51
5969 6928 2.297033 GCTTTGATGGCAAGGAAACTGA 59.703 45.455 0.00 0.00 42.68 3.41
5970 6929 2.036217 TGCTTTGATGGCAAGGAAACTG 59.964 45.455 0.00 0.00 42.68 3.16
5972 6931 2.611224 CCTGCTTTGATGGCAAGGAAAC 60.611 50.000 0.00 0.00 39.30 2.78
5973 6932 1.619827 CCTGCTTTGATGGCAAGGAAA 59.380 47.619 0.00 0.00 39.30 3.13
5974 6933 1.259609 CCTGCTTTGATGGCAAGGAA 58.740 50.000 0.00 0.00 39.30 3.36
5975 6934 0.612732 CCCTGCTTTGATGGCAAGGA 60.613 55.000 0.70 0.00 42.17 3.36
5976 6935 1.610554 CCCCTGCTTTGATGGCAAGG 61.611 60.000 0.00 0.00 40.04 3.61
5977 6936 1.895238 CCCCTGCTTTGATGGCAAG 59.105 57.895 0.00 0.00 39.30 4.01
5978 6937 2.285024 GCCCCTGCTTTGATGGCAA 61.285 57.895 0.00 0.00 41.76 4.52
5979 6938 2.681064 GCCCCTGCTTTGATGGCA 60.681 61.111 0.00 0.00 41.76 4.92
5980 6939 1.829523 TTTGCCCCTGCTTTGATGGC 61.830 55.000 0.00 0.00 42.49 4.40
5981 6940 0.686224 TTTTGCCCCTGCTTTGATGG 59.314 50.000 0.00 0.00 38.71 3.51
5982 6941 1.070445 TGTTTTGCCCCTGCTTTGATG 59.930 47.619 0.00 0.00 38.71 3.07
5983 6942 1.345415 CTGTTTTGCCCCTGCTTTGAT 59.655 47.619 0.00 0.00 38.71 2.57
5984 6943 0.752054 CTGTTTTGCCCCTGCTTTGA 59.248 50.000 0.00 0.00 38.71 2.69
5985 6944 0.465287 ACTGTTTTGCCCCTGCTTTG 59.535 50.000 0.00 0.00 38.71 2.77
5986 6945 0.752658 GACTGTTTTGCCCCTGCTTT 59.247 50.000 0.00 0.00 38.71 3.51
5987 6946 0.106015 AGACTGTTTTGCCCCTGCTT 60.106 50.000 0.00 0.00 38.71 3.91
5988 6947 0.771127 TAGACTGTTTTGCCCCTGCT 59.229 50.000 0.00 0.00 38.71 4.24
5989 6948 1.616159 TTAGACTGTTTTGCCCCTGC 58.384 50.000 0.00 0.00 38.26 4.85
5990 6949 4.664150 TTTTTAGACTGTTTTGCCCCTG 57.336 40.909 0.00 0.00 0.00 4.45
6009 6968 1.827344 GAGGCAATAGCTGGGCTTTTT 59.173 47.619 11.27 0.00 40.44 1.94
6010 6969 1.478631 GAGGCAATAGCTGGGCTTTT 58.521 50.000 11.27 0.00 40.44 2.27
6011 6970 0.396278 GGAGGCAATAGCTGGGCTTT 60.396 55.000 11.27 0.00 40.44 3.51
6012 6971 1.228510 GGAGGCAATAGCTGGGCTT 59.771 57.895 11.27 1.95 40.44 4.35
6013 6972 1.284841 AAGGAGGCAATAGCTGGGCT 61.285 55.000 10.06 10.06 43.41 5.19
6014 6973 1.105759 CAAGGAGGCAATAGCTGGGC 61.106 60.000 0.00 0.00 41.70 5.36
6015 6974 0.466922 CCAAGGAGGCAATAGCTGGG 60.467 60.000 0.00 0.00 41.70 4.45
6016 6975 0.257039 ACCAAGGAGGCAATAGCTGG 59.743 55.000 0.00 0.00 43.14 4.85
6017 6976 3.144506 CATACCAAGGAGGCAATAGCTG 58.855 50.000 0.00 0.00 43.14 4.24
6018 6977 2.487986 GCATACCAAGGAGGCAATAGCT 60.488 50.000 0.00 0.00 43.14 3.32
6019 6978 1.882623 GCATACCAAGGAGGCAATAGC 59.117 52.381 0.00 0.00 43.14 2.97
6020 6979 2.146342 CGCATACCAAGGAGGCAATAG 58.854 52.381 0.00 0.00 43.14 1.73
6021 6980 1.202758 CCGCATACCAAGGAGGCAATA 60.203 52.381 0.00 0.00 43.14 1.90
6022 6981 0.466189 CCGCATACCAAGGAGGCAAT 60.466 55.000 0.00 0.00 43.14 3.56
6023 6982 1.077787 CCGCATACCAAGGAGGCAA 60.078 57.895 0.00 0.00 43.14 4.52
6024 6983 2.589540 CCGCATACCAAGGAGGCA 59.410 61.111 0.00 0.00 43.14 4.75
6025 6984 2.203209 CCCGCATACCAAGGAGGC 60.203 66.667 0.00 0.00 43.14 4.70
6026 6985 2.203209 GCCCGCATACCAAGGAGG 60.203 66.667 0.00 0.00 45.67 4.30
6027 6986 1.524621 CAGCCCGCATACCAAGGAG 60.525 63.158 0.00 0.00 0.00 3.69
6028 6987 2.589540 CAGCCCGCATACCAAGGA 59.410 61.111 0.00 0.00 0.00 3.36
6029 6988 2.516930 CCAGCCCGCATACCAAGG 60.517 66.667 0.00 0.00 0.00 3.61
6030 6989 1.376609 GAACCAGCCCGCATACCAAG 61.377 60.000 0.00 0.00 0.00 3.61
6031 6990 1.377987 GAACCAGCCCGCATACCAA 60.378 57.895 0.00 0.00 0.00 3.67
6032 6991 1.847798 AAGAACCAGCCCGCATACCA 61.848 55.000 0.00 0.00 0.00 3.25
6033 6992 0.179468 TAAGAACCAGCCCGCATACC 59.821 55.000 0.00 0.00 0.00 2.73
6034 6993 1.873591 CATAAGAACCAGCCCGCATAC 59.126 52.381 0.00 0.00 0.00 2.39
6035 6994 1.813862 GCATAAGAACCAGCCCGCATA 60.814 52.381 0.00 0.00 0.00 3.14
6036 6995 1.103398 GCATAAGAACCAGCCCGCAT 61.103 55.000 0.00 0.00 0.00 4.73
6037 6996 1.748879 GCATAAGAACCAGCCCGCA 60.749 57.895 0.00 0.00 0.00 5.69
6038 6997 1.748879 TGCATAAGAACCAGCCCGC 60.749 57.895 0.00 0.00 0.00 6.13
6039 6998 0.676466 TGTGCATAAGAACCAGCCCG 60.676 55.000 0.00 0.00 0.00 6.13
6040 6999 1.098050 CTGTGCATAAGAACCAGCCC 58.902 55.000 0.00 0.00 0.00 5.19
6041 7000 2.012673 CTCTGTGCATAAGAACCAGCC 58.987 52.381 0.00 0.00 0.00 4.85
6042 7001 2.977914 TCTCTGTGCATAAGAACCAGC 58.022 47.619 0.00 0.00 0.00 4.85
6043 7002 5.947228 TTTTCTCTGTGCATAAGAACCAG 57.053 39.130 7.61 0.70 0.00 4.00
6063 7022 1.278127 TCCGAGGCTCCGATTCTTTTT 59.722 47.619 9.32 0.00 0.00 1.94
6064 7023 0.902531 TCCGAGGCTCCGATTCTTTT 59.097 50.000 9.32 0.00 0.00 2.27
6065 7024 0.461961 CTCCGAGGCTCCGATTCTTT 59.538 55.000 9.32 0.00 0.00 2.52
6066 7025 1.395826 CCTCCGAGGCTCCGATTCTT 61.396 60.000 9.32 0.00 0.00 2.52
6067 7026 1.830408 CCTCCGAGGCTCCGATTCT 60.830 63.158 9.32 0.00 0.00 2.40
6068 7027 2.731374 CCTCCGAGGCTCCGATTC 59.269 66.667 9.32 0.00 0.00 2.52
6069 7028 2.840102 CCCTCCGAGGCTCCGATT 60.840 66.667 9.17 0.00 32.73 3.34
6070 7029 3.801068 CTCCCTCCGAGGCTCCGAT 62.801 68.421 9.17 0.00 34.67 4.18
6071 7030 4.507916 CTCCCTCCGAGGCTCCGA 62.508 72.222 9.17 7.18 34.67 4.55
6072 7031 2.700407 ATACTCCCTCCGAGGCTCCG 62.700 65.000 9.17 2.21 43.57 4.63
6073 7032 0.470268 AATACTCCCTCCGAGGCTCC 60.470 60.000 9.17 0.00 43.57 4.70
6074 7033 1.069358 CAAATACTCCCTCCGAGGCTC 59.931 57.143 9.17 3.87 43.57 4.70
6075 7034 1.123928 CAAATACTCCCTCCGAGGCT 58.876 55.000 9.17 0.00 43.57 4.58
6076 7035 0.106894 CCAAATACTCCCTCCGAGGC 59.893 60.000 9.17 0.00 43.57 4.70
6077 7036 1.789523 TCCAAATACTCCCTCCGAGG 58.210 55.000 7.56 7.56 43.57 4.63
6078 7037 2.103263 CCTTCCAAATACTCCCTCCGAG 59.897 54.545 0.00 0.00 44.95 4.63
6079 7038 2.116238 CCTTCCAAATACTCCCTCCGA 58.884 52.381 0.00 0.00 0.00 4.55
6080 7039 1.838077 ACCTTCCAAATACTCCCTCCG 59.162 52.381 0.00 0.00 0.00 4.63
6081 7040 2.172930 GGACCTTCCAAATACTCCCTCC 59.827 54.545 0.00 0.00 36.28 4.30
6082 7041 2.158943 CGGACCTTCCAAATACTCCCTC 60.159 54.545 0.00 0.00 35.91 4.30
6083 7042 1.838077 CGGACCTTCCAAATACTCCCT 59.162 52.381 0.00 0.00 35.91 4.20
6084 7043 1.134189 CCGGACCTTCCAAATACTCCC 60.134 57.143 0.00 0.00 35.91 4.30
6085 7044 1.558294 ACCGGACCTTCCAAATACTCC 59.442 52.381 9.46 0.00 35.91 3.85
6086 7045 2.629051 CACCGGACCTTCCAAATACTC 58.371 52.381 9.46 0.00 35.91 2.59
6087 7046 1.280998 CCACCGGACCTTCCAAATACT 59.719 52.381 9.46 0.00 35.91 2.12
6088 7047 1.746470 CCACCGGACCTTCCAAATAC 58.254 55.000 9.46 0.00 35.91 1.89
6142 7477 5.119898 GCCATTGCAATTTTCACGTATTCAA 59.880 36.000 9.83 0.00 37.47 2.69
6162 7497 5.653255 AAGGTTAACTGGATAGATGCCAT 57.347 39.130 5.42 0.00 34.33 4.40
6492 7827 5.373812 AAGGAAATATTGACTGTCGGGAT 57.626 39.130 2.98 0.40 0.00 3.85
6628 7963 3.071023 TGGCCAGTATTGCTCCTACATAC 59.929 47.826 0.00 0.00 0.00 2.39
7495 8887 0.248990 ACACAACACAGCGCCAATTG 60.249 50.000 2.29 6.77 0.00 2.32
7700 9117 6.539826 TCATCATGCTAAACCACTGTAATCAG 59.460 38.462 0.00 0.00 46.18 2.90
7750 9167 0.104855 TCGAAATCGGATGCAGAGGG 59.895 55.000 2.63 0.00 40.29 4.30
7761 9178 7.072030 ACTCAAAAGAATGTTCTTCGAAATCG 58.928 34.615 8.34 0.00 46.22 3.34
7762 9179 9.878599 TTACTCAAAAGAATGTTCTTCGAAATC 57.121 29.630 8.34 0.00 46.22 2.17
7763 9180 9.884465 CTTACTCAAAAGAATGTTCTTCGAAAT 57.116 29.630 8.34 3.71 46.22 2.17
7767 9184 7.012358 GCTCTTACTCAAAAGAATGTTCTTCG 58.988 38.462 8.34 4.07 46.22 3.79
8157 9646 0.250901 ATGAACTTGGCGCCTTGAGT 60.251 50.000 29.70 24.03 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.