Multiple sequence alignment - TraesCS3B01G241700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G241700 chr3B 100.000 4605 0 0 1 4605 381483293 381478689 0.000000e+00 8504.0
1 TraesCS3B01G241700 chr3B 94.030 67 4 0 2018 2084 752964952 752965018 8.150000e-18 102.0
2 TraesCS3B01G241700 chr3D 95.328 2226 74 8 1629 3826 288550651 288548428 0.000000e+00 3507.0
3 TraesCS3B01G241700 chr3D 93.027 674 24 5 895 1546 288551334 288550662 0.000000e+00 963.0
4 TraesCS3B01G241700 chr3A 89.955 1762 115 21 2085 3822 378812353 378810630 0.000000e+00 2217.0
5 TraesCS3B01G241700 chr3A 90.972 1008 37 12 895 1890 378814904 378813939 0.000000e+00 1308.0
6 TraesCS3B01G241700 chr3A 95.205 146 7 0 1891 2036 378812482 378812337 9.960000e-57 231.0
7 TraesCS3B01G241700 chr5D 88.839 663 72 2 3923 4584 29614326 29613665 0.000000e+00 813.0
8 TraesCS3B01G241700 chr5D 87.107 636 77 4 3927 4561 266073426 266074057 0.000000e+00 715.0
9 TraesCS3B01G241700 chr6A 86.344 681 89 4 3927 4605 483891006 483891684 0.000000e+00 739.0
10 TraesCS3B01G241700 chr6A 87.421 636 65 5 3927 4561 381109268 381108647 0.000000e+00 717.0
11 TraesCS3B01G241700 chr6A 94.737 133 4 2 1668 1798 263887018 263886887 2.170000e-48 204.0
12 TraesCS3B01G241700 chr6A 94.030 67 2 2 2020 2084 381109436 381109502 2.930000e-17 100.0
13 TraesCS3B01G241700 chr4A 87.264 636 73 8 3927 4560 137542929 137543558 0.000000e+00 719.0
14 TraesCS3B01G241700 chr7B 86.970 637 76 7 3927 4561 444228870 444228239 0.000000e+00 710.0
15 TraesCS3B01G241700 chr7B 90.968 155 5 4 1669 1815 44939554 44939707 2.810000e-47 200.0
16 TraesCS3B01G241700 chr7B 89.286 84 9 0 3824 3907 91171644 91171727 6.300000e-19 106.0
17 TraesCS3B01G241700 chr2A 86.950 636 72 3 3927 4561 706214402 706215027 0.000000e+00 704.0
18 TraesCS3B01G241700 chr2A 96.825 63 2 0 2022 2084 14888097 14888159 6.300000e-19 106.0
19 TraesCS3B01G241700 chr2A 95.385 65 1 2 2020 2084 63799626 63799688 8.150000e-18 102.0
20 TraesCS3B01G241700 chr6D 88.107 597 56 6 3927 4522 263002399 263002981 0.000000e+00 695.0
21 TraesCS3B01G241700 chr6D 94.737 133 4 2 1668 1798 221843147 221843016 2.170000e-48 204.0
22 TraesCS3B01G241700 chr6D 73.913 299 54 19 100 382 12658051 12657761 1.050000e-16 99.0
23 TraesCS3B01G241700 chr2B 85.714 630 86 4 3927 4555 242587653 242588279 0.000000e+00 662.0
24 TraesCS3B01G241700 chr4D 86.567 201 25 2 4406 4605 289619667 289619468 2.160000e-53 220.0
25 TraesCS3B01G241700 chr4D 89.157 166 18 0 4440 4605 271214900 271215065 1.680000e-49 207.0
26 TraesCS3B01G241700 chr4D 91.558 154 5 2 1669 1814 74079351 74079504 6.040000e-49 206.0
27 TraesCS3B01G241700 chr4D 90.604 149 11 3 1668 1814 428587793 428587940 1.310000e-45 195.0
28 TraesCS3B01G241700 chr6B 91.139 158 8 4 1662 1814 519402801 519402957 4.670000e-50 209.0
29 TraesCS3B01G241700 chr2D 94.815 135 4 2 1666 1798 79056164 79056297 1.680000e-49 207.0
30 TraesCS3B01G241700 chr2D 80.612 98 14 5 2584 2677 635142581 635142677 2.300000e-08 71.3
31 TraesCS3B01G241700 chr7A 85.000 200 24 5 4406 4605 167262906 167262713 1.010000e-46 198.0
32 TraesCS3B01G241700 chr7A 73.735 415 74 23 36 432 138007551 138007948 3.740000e-26 130.0
33 TraesCS3B01G241700 chr7A 100.000 53 0 0 2032 2084 549979793 549979741 1.050000e-16 99.0
34 TraesCS3B01G241700 chr1D 98.361 61 1 0 2024 2084 494172152 494172212 1.750000e-19 108.0
35 TraesCS3B01G241700 chr5A 95.312 64 2 1 2021 2084 602945170 602945232 2.930000e-17 100.0
36 TraesCS3B01G241700 chr1B 81.522 92 15 2 227 317 403116515 403116425 1.780000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G241700 chr3B 381478689 381483293 4604 True 8504 8504 100.0000 1 4605 1 chr3B.!!$R1 4604
1 TraesCS3B01G241700 chr3D 288548428 288551334 2906 True 2235 3507 94.1775 895 3826 2 chr3D.!!$R1 2931
2 TraesCS3B01G241700 chr3A 378810630 378814904 4274 True 1252 2217 92.0440 895 3822 3 chr3A.!!$R1 2927
3 TraesCS3B01G241700 chr5D 29613665 29614326 661 True 813 813 88.8390 3923 4584 1 chr5D.!!$R1 661
4 TraesCS3B01G241700 chr5D 266073426 266074057 631 False 715 715 87.1070 3927 4561 1 chr5D.!!$F1 634
5 TraesCS3B01G241700 chr6A 483891006 483891684 678 False 739 739 86.3440 3927 4605 1 chr6A.!!$F2 678
6 TraesCS3B01G241700 chr6A 381108647 381109268 621 True 717 717 87.4210 3927 4561 1 chr6A.!!$R2 634
7 TraesCS3B01G241700 chr4A 137542929 137543558 629 False 719 719 87.2640 3927 4560 1 chr4A.!!$F1 633
8 TraesCS3B01G241700 chr7B 444228239 444228870 631 True 710 710 86.9700 3927 4561 1 chr7B.!!$R1 634
9 TraesCS3B01G241700 chr2A 706214402 706215027 625 False 704 704 86.9500 3927 4561 1 chr2A.!!$F3 634
10 TraesCS3B01G241700 chr6D 263002399 263002981 582 False 695 695 88.1070 3927 4522 1 chr6D.!!$F1 595
11 TraesCS3B01G241700 chr2B 242587653 242588279 626 False 662 662 85.7140 3927 4555 1 chr2B.!!$F1 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
884 885 0.104304 CACAGTACCTATGGCGTCCC 59.896 60.0 0.0 0.0 0.00 4.46 F
886 887 0.389391 CAGTACCTATGGCGTCCCAG 59.611 60.0 0.0 0.0 46.24 4.45 F
2437 3941 0.898326 GAAATTGGGCGGAACAGGGT 60.898 55.0 0.0 0.0 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2479 3993 1.935400 ACCCCCATCTCCATGCCAA 60.935 57.895 0.0 0.0 0.0 4.52 R
2529 4043 2.833227 CGAGAACCCAACCACCCA 59.167 61.111 0.0 0.0 0.0 4.51 R
3931 5462 0.036294 GAACCCTAAGCAAGCGACCT 60.036 55.000 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 142 4.360951 AAAAATGTTCCAGGAGTACGGA 57.639 40.909 0.00 0.00 0.00 4.69
142 143 4.360951 AAAATGTTCCAGGAGTACGGAA 57.639 40.909 0.00 0.00 38.99 4.30
143 144 4.360951 AAATGTTCCAGGAGTACGGAAA 57.639 40.909 1.99 0.00 42.80 3.13
144 145 4.360951 AATGTTCCAGGAGTACGGAAAA 57.639 40.909 1.99 0.00 42.80 2.29
145 146 3.842007 TGTTCCAGGAGTACGGAAAAA 57.158 42.857 1.99 0.00 42.80 1.94
211 212 9.535878 AAATGTTCACCGTGTATTTTAAAATGT 57.464 25.926 21.19 8.92 0.00 2.71
212 213 9.535878 AATGTTCACCGTGTATTTTAAAATGTT 57.464 25.926 21.19 1.03 0.00 2.71
216 217 9.460906 TTCACCGTGTATTTTAAAATGTTAACC 57.539 29.630 21.19 6.77 0.00 2.85
217 218 8.627403 TCACCGTGTATTTTAAAATGTTAACCA 58.373 29.630 21.19 7.21 0.00 3.67
218 219 9.413048 CACCGTGTATTTTAAAATGTTAACCAT 57.587 29.630 21.19 0.00 34.36 3.55
219 220 9.413048 ACCGTGTATTTTAAAATGTTAACCATG 57.587 29.630 21.19 12.67 32.82 3.66
220 221 9.413048 CCGTGTATTTTAAAATGTTAACCATGT 57.587 29.630 21.19 0.00 32.82 3.21
417 418 9.979578 ATGAAAAATGCAGAATGTGTACTAAAA 57.020 25.926 0.00 0.00 39.31 1.52
418 419 9.809096 TGAAAAATGCAGAATGTGTACTAAAAA 57.191 25.926 0.00 0.00 39.31 1.94
440 441 7.722795 AAAATGTAGGCATGTGTTAAAAACC 57.277 32.000 0.00 0.00 35.15 3.27
441 442 4.857509 TGTAGGCATGTGTTAAAAACCC 57.142 40.909 0.00 0.00 0.00 4.11
442 443 3.253677 TGTAGGCATGTGTTAAAAACCCG 59.746 43.478 0.00 0.00 0.00 5.28
443 444 2.588620 AGGCATGTGTTAAAAACCCGA 58.411 42.857 0.00 0.00 0.00 5.14
444 445 3.161866 AGGCATGTGTTAAAAACCCGAT 58.838 40.909 0.00 0.00 0.00 4.18
445 446 3.056891 AGGCATGTGTTAAAAACCCGATG 60.057 43.478 0.00 0.00 0.00 3.84
446 447 3.057174 GGCATGTGTTAAAAACCCGATGA 60.057 43.478 0.00 0.00 0.00 2.92
447 448 4.551388 GCATGTGTTAAAAACCCGATGAA 58.449 39.130 0.00 0.00 0.00 2.57
448 449 4.985409 GCATGTGTTAAAAACCCGATGAAA 59.015 37.500 0.00 0.00 0.00 2.69
449 450 5.118510 GCATGTGTTAAAAACCCGATGAAAG 59.881 40.000 0.00 0.00 0.00 2.62
450 451 5.838531 TGTGTTAAAAACCCGATGAAAGT 57.161 34.783 0.00 0.00 0.00 2.66
451 452 6.939132 TGTGTTAAAAACCCGATGAAAGTA 57.061 33.333 0.00 0.00 0.00 2.24
452 453 7.330900 TGTGTTAAAAACCCGATGAAAGTAA 57.669 32.000 0.00 0.00 0.00 2.24
453 454 7.769220 TGTGTTAAAAACCCGATGAAAGTAAA 58.231 30.769 0.00 0.00 0.00 2.01
454 455 8.248945 TGTGTTAAAAACCCGATGAAAGTAAAA 58.751 29.630 0.00 0.00 0.00 1.52
455 456 9.085250 GTGTTAAAAACCCGATGAAAGTAAAAA 57.915 29.630 0.00 0.00 0.00 1.94
493 494 9.898152 ACCCAAAATAAGAAAAATGAAAACTGA 57.102 25.926 0.00 0.00 0.00 3.41
502 503 9.500785 AAGAAAAATGAAAACTGAAGAAAACCA 57.499 25.926 0.00 0.00 0.00 3.67
503 504 9.500785 AGAAAAATGAAAACTGAAGAAAACCAA 57.499 25.926 0.00 0.00 0.00 3.67
506 507 6.849588 ATGAAAACTGAAGAAAACCAATGC 57.150 33.333 0.00 0.00 0.00 3.56
507 508 5.728471 TGAAAACTGAAGAAAACCAATGCA 58.272 33.333 0.00 0.00 0.00 3.96
508 509 6.169094 TGAAAACTGAAGAAAACCAATGCAA 58.831 32.000 0.00 0.00 0.00 4.08
509 510 6.652481 TGAAAACTGAAGAAAACCAATGCAAA 59.348 30.769 0.00 0.00 0.00 3.68
510 511 7.173907 TGAAAACTGAAGAAAACCAATGCAAAA 59.826 29.630 0.00 0.00 0.00 2.44
511 512 6.667007 AACTGAAGAAAACCAATGCAAAAG 57.333 33.333 0.00 0.00 0.00 2.27
512 513 5.976458 ACTGAAGAAAACCAATGCAAAAGA 58.024 33.333 0.00 0.00 0.00 2.52
513 514 6.405538 ACTGAAGAAAACCAATGCAAAAGAA 58.594 32.000 0.00 0.00 0.00 2.52
514 515 7.049754 ACTGAAGAAAACCAATGCAAAAGAAT 58.950 30.769 0.00 0.00 0.00 2.40
515 516 7.553760 ACTGAAGAAAACCAATGCAAAAGAATT 59.446 29.630 0.00 0.00 0.00 2.17
516 517 8.954950 TGAAGAAAACCAATGCAAAAGAATTA 57.045 26.923 0.00 0.00 0.00 1.40
517 518 9.388506 TGAAGAAAACCAATGCAAAAGAATTAA 57.611 25.926 0.00 0.00 0.00 1.40
520 521 8.344831 AGAAAACCAATGCAAAAGAATTAAAGC 58.655 29.630 0.00 0.00 0.00 3.51
521 522 7.565323 AAACCAATGCAAAAGAATTAAAGCA 57.435 28.000 0.00 0.00 36.34 3.91
522 523 7.565323 AACCAATGCAAAAGAATTAAAGCAA 57.435 28.000 0.00 0.00 35.45 3.91
523 524 7.748691 ACCAATGCAAAAGAATTAAAGCAAT 57.251 28.000 0.00 0.00 35.45 3.56
524 525 7.586747 ACCAATGCAAAAGAATTAAAGCAATG 58.413 30.769 0.00 0.00 35.45 2.82
525 526 7.444792 ACCAATGCAAAAGAATTAAAGCAATGA 59.555 29.630 0.00 0.00 35.52 2.57
526 527 8.291032 CCAATGCAAAAGAATTAAAGCAATGAA 58.709 29.630 0.00 0.00 35.52 2.57
527 528 9.666626 CAATGCAAAAGAATTAAAGCAATGAAA 57.333 25.926 0.00 0.00 35.52 2.69
529 530 9.667989 ATGCAAAAGAATTAAAGCAATGAAAAC 57.332 25.926 0.00 0.00 35.45 2.43
530 531 8.127954 TGCAAAAGAATTAAAGCAATGAAAACC 58.872 29.630 0.00 0.00 0.00 3.27
531 532 8.127954 GCAAAAGAATTAAAGCAATGAAAACCA 58.872 29.630 0.00 0.00 0.00 3.67
534 535 9.612066 AAAGAATTAAAGCAATGAAAACCAAGA 57.388 25.926 0.00 0.00 0.00 3.02
535 536 9.612066 AAGAATTAAAGCAATGAAAACCAAGAA 57.388 25.926 0.00 0.00 0.00 2.52
536 537 9.612066 AGAATTAAAGCAATGAAAACCAAGAAA 57.388 25.926 0.00 0.00 0.00 2.52
561 562 6.877611 AAAAGAGAAAACATAGAAAGCCGA 57.122 33.333 0.00 0.00 0.00 5.54
562 563 7.454260 AAAAGAGAAAACATAGAAAGCCGAT 57.546 32.000 0.00 0.00 0.00 4.18
563 564 6.428385 AAGAGAAAACATAGAAAGCCGATG 57.572 37.500 0.00 0.00 34.55 3.84
564 565 5.734720 AGAGAAAACATAGAAAGCCGATGA 58.265 37.500 0.00 0.00 32.96 2.92
565 566 6.173339 AGAGAAAACATAGAAAGCCGATGAA 58.827 36.000 0.00 0.00 32.96 2.57
566 567 6.655003 AGAGAAAACATAGAAAGCCGATGAAA 59.345 34.615 0.00 0.00 32.96 2.69
567 568 7.174946 AGAGAAAACATAGAAAGCCGATGAAAA 59.825 33.333 0.00 0.00 32.96 2.29
568 569 7.084486 AGAAAACATAGAAAGCCGATGAAAAC 58.916 34.615 0.00 0.00 32.96 2.43
569 570 6.575162 AAACATAGAAAGCCGATGAAAACT 57.425 33.333 0.00 0.00 32.96 2.66
570 571 7.681939 AAACATAGAAAGCCGATGAAAACTA 57.318 32.000 0.00 0.00 32.96 2.24
571 572 7.681939 AACATAGAAAGCCGATGAAAACTAA 57.318 32.000 0.00 0.00 32.96 2.24
572 573 7.308782 ACATAGAAAGCCGATGAAAACTAAG 57.691 36.000 0.00 0.00 32.96 2.18
573 574 7.103641 ACATAGAAAGCCGATGAAAACTAAGA 58.896 34.615 0.00 0.00 32.96 2.10
574 575 7.606456 ACATAGAAAGCCGATGAAAACTAAGAA 59.394 33.333 0.00 0.00 32.96 2.52
575 576 6.877611 AGAAAGCCGATGAAAACTAAGAAA 57.122 33.333 0.00 0.00 0.00 2.52
576 577 6.903419 AGAAAGCCGATGAAAACTAAGAAAG 58.097 36.000 0.00 0.00 0.00 2.62
577 578 6.710744 AGAAAGCCGATGAAAACTAAGAAAGA 59.289 34.615 0.00 0.00 0.00 2.52
578 579 6.877611 AAGCCGATGAAAACTAAGAAAGAA 57.122 33.333 0.00 0.00 0.00 2.52
579 580 6.877611 AGCCGATGAAAACTAAGAAAGAAA 57.122 33.333 0.00 0.00 0.00 2.52
580 581 6.903419 AGCCGATGAAAACTAAGAAAGAAAG 58.097 36.000 0.00 0.00 0.00 2.62
581 582 6.710744 AGCCGATGAAAACTAAGAAAGAAAGA 59.289 34.615 0.00 0.00 0.00 2.52
582 583 7.228706 AGCCGATGAAAACTAAGAAAGAAAGAA 59.771 33.333 0.00 0.00 0.00 2.52
583 584 7.860872 GCCGATGAAAACTAAGAAAGAAAGAAA 59.139 33.333 0.00 0.00 0.00 2.52
584 585 9.730420 CCGATGAAAACTAAGAAAGAAAGAAAA 57.270 29.630 0.00 0.00 0.00 2.29
587 588 8.905103 TGAAAACTAAGAAAGAAAGAAAACCG 57.095 30.769 0.00 0.00 0.00 4.44
588 589 8.732531 TGAAAACTAAGAAAGAAAGAAAACCGA 58.267 29.630 0.00 0.00 0.00 4.69
589 590 9.563898 GAAAACTAAGAAAGAAAGAAAACCGAA 57.436 29.630 0.00 0.00 0.00 4.30
590 591 9.569167 AAAACTAAGAAAGAAAGAAAACCGAAG 57.431 29.630 0.00 0.00 0.00 3.79
591 592 8.502105 AACTAAGAAAGAAAGAAAACCGAAGA 57.498 30.769 0.00 0.00 0.00 2.87
592 593 8.678593 ACTAAGAAAGAAAGAAAACCGAAGAT 57.321 30.769 0.00 0.00 0.00 2.40
593 594 9.774413 ACTAAGAAAGAAAGAAAACCGAAGATA 57.226 29.630 0.00 0.00 0.00 1.98
600 601 9.734984 AAGAAAGAAAACCGAAGATAAATAGGA 57.265 29.630 0.00 0.00 0.00 2.94
601 602 9.734984 AGAAAGAAAACCGAAGATAAATAGGAA 57.265 29.630 0.00 0.00 0.00 3.36
604 605 7.971455 AGAAAACCGAAGATAAATAGGAAACG 58.029 34.615 0.00 0.00 0.00 3.60
605 606 7.820872 AGAAAACCGAAGATAAATAGGAAACGA 59.179 33.333 0.00 0.00 0.00 3.85
606 607 7.910441 AAACCGAAGATAAATAGGAAACGAA 57.090 32.000 0.00 0.00 0.00 3.85
607 608 7.910441 AACCGAAGATAAATAGGAAACGAAA 57.090 32.000 0.00 0.00 0.00 3.46
608 609 7.910441 ACCGAAGATAAATAGGAAACGAAAA 57.090 32.000 0.00 0.00 0.00 2.29
609 610 8.326680 ACCGAAGATAAATAGGAAACGAAAAA 57.673 30.769 0.00 0.00 0.00 1.94
610 611 8.953313 ACCGAAGATAAATAGGAAACGAAAAAT 58.047 29.630 0.00 0.00 0.00 1.82
622 623 8.056710 AGGAAACGAAAAATAAAATGACAACG 57.943 30.769 0.00 0.00 0.00 4.10
623 624 7.916450 AGGAAACGAAAAATAAAATGACAACGA 59.084 29.630 0.00 0.00 0.00 3.85
624 625 8.533153 GGAAACGAAAAATAAAATGACAACGAA 58.467 29.630 0.00 0.00 0.00 3.85
625 626 9.549923 GAAACGAAAAATAAAATGACAACGAAG 57.450 29.630 0.00 0.00 0.00 3.79
626 627 8.844441 AACGAAAAATAAAATGACAACGAAGA 57.156 26.923 0.00 0.00 0.00 2.87
627 628 8.844441 ACGAAAAATAAAATGACAACGAAGAA 57.156 26.923 0.00 0.00 0.00 2.52
628 629 9.291664 ACGAAAAATAAAATGACAACGAAGAAA 57.708 25.926 0.00 0.00 0.00 2.52
629 630 9.763979 CGAAAAATAAAATGACAACGAAGAAAG 57.236 29.630 0.00 0.00 0.00 2.62
633 634 9.796120 AAATAAAATGACAACGAAGAAAGAACA 57.204 25.926 0.00 0.00 0.00 3.18
634 635 9.796120 AATAAAATGACAACGAAGAAAGAACAA 57.204 25.926 0.00 0.00 0.00 2.83
635 636 9.796120 ATAAAATGACAACGAAGAAAGAACAAA 57.204 25.926 0.00 0.00 0.00 2.83
636 637 8.527567 AAAATGACAACGAAGAAAGAACAAAA 57.472 26.923 0.00 0.00 0.00 2.44
637 638 7.740519 AATGACAACGAAGAAAGAACAAAAG 57.259 32.000 0.00 0.00 0.00 2.27
638 639 6.489127 TGACAACGAAGAAAGAACAAAAGA 57.511 33.333 0.00 0.00 0.00 2.52
639 640 6.904498 TGACAACGAAGAAAGAACAAAAGAA 58.096 32.000 0.00 0.00 0.00 2.52
640 641 7.364200 TGACAACGAAGAAAGAACAAAAGAAA 58.636 30.769 0.00 0.00 0.00 2.52
641 642 7.863375 TGACAACGAAGAAAGAACAAAAGAAAA 59.137 29.630 0.00 0.00 0.00 2.29
642 643 8.227731 ACAACGAAGAAAGAACAAAAGAAAAG 57.772 30.769 0.00 0.00 0.00 2.27
643 644 8.079809 ACAACGAAGAAAGAACAAAAGAAAAGA 58.920 29.630 0.00 0.00 0.00 2.52
644 645 8.911662 CAACGAAGAAAGAACAAAAGAAAAGAA 58.088 29.630 0.00 0.00 0.00 2.52
645 646 9.471084 AACGAAGAAAGAACAAAAGAAAAGAAA 57.529 25.926 0.00 0.00 0.00 2.52
646 647 9.471084 ACGAAGAAAGAACAAAAGAAAAGAAAA 57.529 25.926 0.00 0.00 0.00 2.29
670 671 9.961264 AAAAACCAGTTAAAACCAGGAATAAAA 57.039 25.926 0.00 0.00 0.00 1.52
671 672 8.951787 AAACCAGTTAAAACCAGGAATAAAAC 57.048 30.769 0.00 0.00 0.00 2.43
672 673 7.663043 ACCAGTTAAAACCAGGAATAAAACA 57.337 32.000 0.00 0.00 0.00 2.83
673 674 8.080363 ACCAGTTAAAACCAGGAATAAAACAA 57.920 30.769 0.00 0.00 0.00 2.83
674 675 8.541234 ACCAGTTAAAACCAGGAATAAAACAAA 58.459 29.630 0.00 0.00 0.00 2.83
675 676 9.384764 CCAGTTAAAACCAGGAATAAAACAAAA 57.615 29.630 0.00 0.00 0.00 2.44
714 715 9.936759 ACTTTGAAGAAACAAAATAACCAAAGA 57.063 25.926 15.17 0.00 39.87 2.52
721 722 9.225436 AGAAACAAAATAACCAAAGAAAAAGCA 57.775 25.926 0.00 0.00 0.00 3.91
722 723 9.833182 GAAACAAAATAACCAAAGAAAAAGCAA 57.167 25.926 0.00 0.00 0.00 3.91
732 733 9.612066 AACCAAAGAAAAAGCAAATAGAAATGA 57.388 25.926 0.00 0.00 0.00 2.57
733 734 9.612066 ACCAAAGAAAAAGCAAATAGAAATGAA 57.388 25.926 0.00 0.00 0.00 2.57
750 751 7.751732 AGAAATGAAAAAGAAAACAAACAGGC 58.248 30.769 0.00 0.00 0.00 4.85
751 752 7.390162 AGAAATGAAAAAGAAAACAAACAGGCA 59.610 29.630 0.00 0.00 0.00 4.75
752 753 7.446001 AATGAAAAAGAAAACAAACAGGCAA 57.554 28.000 0.00 0.00 0.00 4.52
753 754 6.867662 TGAAAAAGAAAACAAACAGGCAAA 57.132 29.167 0.00 0.00 0.00 3.68
754 755 6.896969 TGAAAAAGAAAACAAACAGGCAAAG 58.103 32.000 0.00 0.00 0.00 2.77
755 756 6.708054 TGAAAAAGAAAACAAACAGGCAAAGA 59.292 30.769 0.00 0.00 0.00 2.52
756 757 7.227512 TGAAAAAGAAAACAAACAGGCAAAGAA 59.772 29.630 0.00 0.00 0.00 2.52
757 758 7.503521 AAAAGAAAACAAACAGGCAAAGAAA 57.496 28.000 0.00 0.00 0.00 2.52
758 759 7.503521 AAAGAAAACAAACAGGCAAAGAAAA 57.496 28.000 0.00 0.00 0.00 2.29
759 760 6.480524 AGAAAACAAACAGGCAAAGAAAAC 57.519 33.333 0.00 0.00 0.00 2.43
760 761 5.411361 AGAAAACAAACAGGCAAAGAAAACC 59.589 36.000 0.00 0.00 0.00 3.27
761 762 3.971245 ACAAACAGGCAAAGAAAACCA 57.029 38.095 0.00 0.00 0.00 3.67
762 763 4.278975 ACAAACAGGCAAAGAAAACCAA 57.721 36.364 0.00 0.00 0.00 3.67
763 764 4.842574 ACAAACAGGCAAAGAAAACCAAT 58.157 34.783 0.00 0.00 0.00 3.16
764 765 4.635324 ACAAACAGGCAAAGAAAACCAATG 59.365 37.500 0.00 0.00 0.00 2.82
765 766 4.751767 AACAGGCAAAGAAAACCAATGA 57.248 36.364 0.00 0.00 0.00 2.57
766 767 4.751767 ACAGGCAAAGAAAACCAATGAA 57.248 36.364 0.00 0.00 0.00 2.57
767 768 5.096443 ACAGGCAAAGAAAACCAATGAAA 57.904 34.783 0.00 0.00 0.00 2.69
768 769 5.495640 ACAGGCAAAGAAAACCAATGAAAA 58.504 33.333 0.00 0.00 0.00 2.29
769 770 5.942826 ACAGGCAAAGAAAACCAATGAAAAA 59.057 32.000 0.00 0.00 0.00 1.94
792 793 8.684386 AAAACAAAAAGAAACCAAAAGAAGGA 57.316 26.923 0.00 0.00 0.00 3.36
793 794 8.684386 AAACAAAAAGAAACCAAAAGAAGGAA 57.316 26.923 0.00 0.00 0.00 3.36
794 795 7.667043 ACAAAAAGAAACCAAAAGAAGGAAC 57.333 32.000 0.00 0.00 0.00 3.62
795 796 7.220740 ACAAAAAGAAACCAAAAGAAGGAACA 58.779 30.769 0.00 0.00 0.00 3.18
796 797 7.717436 ACAAAAAGAAACCAAAAGAAGGAACAA 59.283 29.630 0.00 0.00 0.00 2.83
797 798 8.563732 CAAAAAGAAACCAAAAGAAGGAACAAA 58.436 29.630 0.00 0.00 0.00 2.83
798 799 8.684386 AAAAGAAACCAAAAGAAGGAACAAAA 57.316 26.923 0.00 0.00 0.00 2.44
799 800 8.684386 AAAGAAACCAAAAGAAGGAACAAAAA 57.316 26.923 0.00 0.00 0.00 1.94
820 821 7.731882 AAAAACGGAAAACCAAAAAGAAAGA 57.268 28.000 0.00 0.00 0.00 2.52
821 822 6.715344 AAACGGAAAACCAAAAAGAAAGAC 57.285 33.333 0.00 0.00 0.00 3.01
822 823 5.394224 ACGGAAAACCAAAAAGAAAGACA 57.606 34.783 0.00 0.00 0.00 3.41
823 824 5.165676 ACGGAAAACCAAAAAGAAAGACAC 58.834 37.500 0.00 0.00 0.00 3.67
824 825 5.047590 ACGGAAAACCAAAAAGAAAGACACT 60.048 36.000 0.00 0.00 0.00 3.55
825 826 6.151480 ACGGAAAACCAAAAAGAAAGACACTA 59.849 34.615 0.00 0.00 0.00 2.74
826 827 7.147966 ACGGAAAACCAAAAAGAAAGACACTAT 60.148 33.333 0.00 0.00 0.00 2.12
827 828 7.167468 CGGAAAACCAAAAAGAAAGACACTATG 59.833 37.037 0.00 0.00 0.00 2.23
828 829 7.042725 GGAAAACCAAAAAGAAAGACACTATGC 60.043 37.037 0.00 0.00 0.00 3.14
829 830 6.463995 AACCAAAAAGAAAGACACTATGCA 57.536 33.333 0.00 0.00 0.00 3.96
830 831 6.463995 ACCAAAAAGAAAGACACTATGCAA 57.536 33.333 0.00 0.00 0.00 4.08
831 832 6.872920 ACCAAAAAGAAAGACACTATGCAAA 58.127 32.000 0.00 0.00 0.00 3.68
832 833 7.327214 ACCAAAAAGAAAGACACTATGCAAAA 58.673 30.769 0.00 0.00 0.00 2.44
833 834 7.986889 ACCAAAAAGAAAGACACTATGCAAAAT 59.013 29.630 0.00 0.00 0.00 1.82
834 835 9.474920 CCAAAAAGAAAGACACTATGCAAAATA 57.525 29.630 0.00 0.00 0.00 1.40
848 849 8.711457 ACTATGCAAAATAGTGAAAAACAATGC 58.289 29.630 0.00 0.00 33.91 3.56
849 850 7.733402 ATGCAAAATAGTGAAAAACAATGCT 57.267 28.000 0.00 0.00 0.00 3.79
850 851 8.830201 ATGCAAAATAGTGAAAAACAATGCTA 57.170 26.923 0.00 0.00 0.00 3.49
851 852 8.071122 TGCAAAATAGTGAAAAACAATGCTAC 57.929 30.769 0.00 0.00 0.00 3.58
852 853 7.170658 TGCAAAATAGTGAAAAACAATGCTACC 59.829 33.333 0.00 0.00 0.00 3.18
853 854 7.170658 GCAAAATAGTGAAAAACAATGCTACCA 59.829 33.333 0.00 0.00 0.00 3.25
854 855 9.206870 CAAAATAGTGAAAAACAATGCTACCAT 57.793 29.630 0.00 0.00 0.00 3.55
857 858 8.807948 ATAGTGAAAAACAATGCTACCATAGT 57.192 30.769 0.00 0.00 0.00 2.12
858 859 6.913170 AGTGAAAAACAATGCTACCATAGTG 58.087 36.000 0.00 0.00 0.00 2.74
859 860 6.714810 AGTGAAAAACAATGCTACCATAGTGA 59.285 34.615 0.00 0.00 0.00 3.41
860 861 7.023575 GTGAAAAACAATGCTACCATAGTGAG 58.976 38.462 0.00 0.00 0.00 3.51
861 862 6.714810 TGAAAAACAATGCTACCATAGTGAGT 59.285 34.615 0.00 0.00 0.00 3.41
862 863 6.743575 AAAACAATGCTACCATAGTGAGTC 57.256 37.500 0.00 0.00 0.00 3.36
863 864 4.408182 ACAATGCTACCATAGTGAGTCC 57.592 45.455 0.00 0.00 0.00 3.85
864 865 3.181475 ACAATGCTACCATAGTGAGTCCG 60.181 47.826 0.00 0.00 0.00 4.79
865 866 0.744874 TGCTACCATAGTGAGTCCGC 59.255 55.000 0.00 0.00 0.00 5.54
866 867 0.744874 GCTACCATAGTGAGTCCGCA 59.255 55.000 0.00 0.00 0.00 5.69
867 868 1.536284 GCTACCATAGTGAGTCCGCAC 60.536 57.143 0.00 0.00 39.05 5.34
868 869 1.749063 CTACCATAGTGAGTCCGCACA 59.251 52.381 4.04 0.00 41.19 4.57
869 870 0.532573 ACCATAGTGAGTCCGCACAG 59.467 55.000 4.04 0.00 41.19 3.66
870 871 0.532573 CCATAGTGAGTCCGCACAGT 59.467 55.000 4.04 0.00 41.19 3.55
871 872 1.749063 CCATAGTGAGTCCGCACAGTA 59.251 52.381 4.04 0.00 41.19 2.74
872 873 2.479730 CCATAGTGAGTCCGCACAGTAC 60.480 54.545 4.04 0.00 41.19 2.73
873 874 1.171308 TAGTGAGTCCGCACAGTACC 58.829 55.000 4.04 0.00 41.19 3.34
874 875 0.539901 AGTGAGTCCGCACAGTACCT 60.540 55.000 4.04 0.00 41.19 3.08
875 876 1.171308 GTGAGTCCGCACAGTACCTA 58.829 55.000 0.00 0.00 38.63 3.08
876 877 1.749634 GTGAGTCCGCACAGTACCTAT 59.250 52.381 0.00 0.00 38.63 2.57
877 878 1.749063 TGAGTCCGCACAGTACCTATG 59.251 52.381 0.00 0.00 0.00 2.23
878 879 1.067212 GAGTCCGCACAGTACCTATGG 59.933 57.143 0.00 0.00 0.00 2.74
879 880 0.529992 GTCCGCACAGTACCTATGGC 60.530 60.000 0.00 0.00 0.00 4.40
880 881 1.591594 CCGCACAGTACCTATGGCG 60.592 63.158 0.00 0.00 43.68 5.69
881 882 1.141019 CGCACAGTACCTATGGCGT 59.859 57.895 0.00 0.00 39.65 5.68
882 883 0.870307 CGCACAGTACCTATGGCGTC 60.870 60.000 0.00 0.00 39.65 5.19
883 884 0.529992 GCACAGTACCTATGGCGTCC 60.530 60.000 0.00 0.00 0.00 4.79
884 885 0.104304 CACAGTACCTATGGCGTCCC 59.896 60.000 0.00 0.00 0.00 4.46
886 887 0.389391 CAGTACCTATGGCGTCCCAG 59.611 60.000 0.00 0.00 46.24 4.45
887 888 1.069258 GTACCTATGGCGTCCCAGC 59.931 63.158 0.00 0.00 46.24 4.85
888 889 1.075525 TACCTATGGCGTCCCAGCT 60.076 57.895 0.00 0.00 46.24 4.24
889 890 1.399744 TACCTATGGCGTCCCAGCTG 61.400 60.000 6.78 6.78 46.24 4.24
890 891 2.109799 CTATGGCGTCCCAGCTGG 59.890 66.667 26.87 26.87 46.24 4.85
902 903 3.329889 AGCTGGGGCCGTCAATCA 61.330 61.111 0.00 0.00 39.73 2.57
929 930 2.163412 GCTGTCTGTCATCTTCGTCTCT 59.837 50.000 0.00 0.00 0.00 3.10
1015 1020 1.734655 CAGGATGGGCTACCTATGGT 58.265 55.000 0.00 0.00 40.16 3.55
1035 1040 2.733593 GTGCGGCTCTCGTCGTTT 60.734 61.111 0.00 0.00 41.13 3.60
1166 1183 1.244816 GTTTAGCCGGCTCCTTTTGT 58.755 50.000 36.73 9.44 0.00 2.83
1223 1240 3.643763 TGTTTTGCGCAAATCGGTAAAT 58.356 36.364 33.94 0.00 38.94 1.40
1255 1272 3.625764 TGATGTAGCCATTTCTTTACGGC 59.374 43.478 0.00 0.00 45.23 5.68
1266 1283 7.982354 GCCATTTCTTTACGGCTAGATATAGAT 59.018 37.037 0.00 0.00 41.50 1.98
1345 1362 9.807649 GATGTTGCTGGTTAATCAAATTATCTT 57.192 29.630 0.00 0.00 0.00 2.40
1366 1383 7.022055 TCTTGTGTTAAATTCTTTCGCTTCA 57.978 32.000 0.00 0.00 0.00 3.02
1427 1444 3.430374 CGAATAACGGTCTCATGGAGGTT 60.430 47.826 0.00 0.26 38.46 3.50
1433 1450 1.065199 GGTCTCATGGAGGTTGATGCA 60.065 52.381 0.00 0.00 0.00 3.96
1468 1485 2.215196 TGTTATAGCCCGCGGAAAATC 58.785 47.619 30.73 9.96 0.00 2.17
1576 1599 4.331992 CGTCATCTGAATTGACATCAGCTT 59.668 41.667 10.91 0.00 42.90 3.74
1584 1607 7.279536 TCTGAATTGACATCAGCTTGAGATAAC 59.720 37.037 1.76 0.00 43.19 1.89
1631 1654 1.985473 TCATGCAGTTTGCCACTTCT 58.015 45.000 0.00 0.00 44.23 2.85
1646 1669 4.142513 GCCACTTCTCAGCTAGGAATTTTG 60.143 45.833 0.00 0.00 0.00 2.44
1675 1698 5.367937 ACTGATGACTTTGCATATACTCCCT 59.632 40.000 0.00 0.00 0.00 4.20
1730 1755 6.901081 TCTGAATCGGATGTATACAGACAT 57.099 37.500 11.91 0.00 42.82 3.06
1903 3390 6.717084 CCATGTCATCTGGTAGACTAGTATCA 59.283 42.308 0.00 0.00 35.81 2.15
1988 3475 4.582701 AAATGTGATGGCGTGAAAAGAA 57.417 36.364 0.00 0.00 0.00 2.52
2115 3617 4.347583 TCTCCAACAGATGCCCAAAAATTT 59.652 37.500 0.00 0.00 0.00 1.82
2437 3941 0.898326 GAAATTGGGCGGAACAGGGT 60.898 55.000 0.00 0.00 0.00 4.34
2529 4043 1.000274 GCAAGGGTGAATGTTCGCTTT 60.000 47.619 6.30 0.13 37.80 3.51
2546 4060 0.466555 TTTGGGTGGTTGGGTTCTCG 60.467 55.000 0.00 0.00 0.00 4.04
2558 4072 0.442699 GGTTCTCGCCACATCGTTTC 59.557 55.000 0.00 0.00 0.00 2.78
2625 4139 6.181908 AGCAAAATTTTGGGCATGATGTAAT 58.818 32.000 27.60 0.00 38.57 1.89
2804 4322 3.047857 TCCATGTGGCAGGATGAAGATA 58.952 45.455 7.80 0.00 39.69 1.98
2830 4348 6.539826 CAGCTGATGTCATAACCTATTTGTCA 59.460 38.462 8.42 0.00 0.00 3.58
2877 4395 7.001674 ACAAATGATAGTGAGTGGGTGTAAAA 58.998 34.615 0.00 0.00 0.00 1.52
3009 4527 4.686122 GCTGCTAAGGGTAATGAGGCTTTA 60.686 45.833 0.00 0.00 0.00 1.85
3047 4565 7.290714 ACATCCATTATACCCTGATGCATTTTT 59.709 33.333 0.00 0.00 37.02 1.94
3058 4576 5.697633 CCTGATGCATTTTTGTTAGTTTGCT 59.302 36.000 0.00 0.00 0.00 3.91
3169 4690 4.821805 CAGCCGAACCTGGATATATTGTTT 59.178 41.667 0.00 0.00 0.00 2.83
3259 4780 8.662255 TGTAAACTTTCTTCTCTTATGGGGTAA 58.338 33.333 0.00 0.00 0.00 2.85
3300 4821 8.002433 TGTTTCTGCTTTATTTGCGAATTTAC 57.998 30.769 4.06 0.00 0.00 2.01
3397 4920 2.795291 TAGTACCCTGCCCATGAGAT 57.205 50.000 0.00 0.00 0.00 2.75
3491 5019 6.486657 TGCTAAGTTTTGATGTGCTTACTTCT 59.513 34.615 0.00 0.00 0.00 2.85
3518 5046 6.352222 GGTGGAGGATGTCAAGAGAATTTCTA 60.352 42.308 0.00 0.00 34.14 2.10
3546 5074 4.318618 GCACTATGAAGCACTGAATCATCG 60.319 45.833 0.00 0.00 35.53 3.84
3567 5095 3.149196 GGATCTCAGCACTGGAAAACAA 58.851 45.455 0.00 0.00 0.00 2.83
3612 5140 8.418597 AAAGAGGCATCAGATTAATTATGCAT 57.581 30.769 22.35 18.68 45.13 3.96
3616 5144 7.959175 AGGCATCAGATTAATTATGCATGTTT 58.041 30.769 22.35 5.33 45.13 2.83
3656 5184 8.608317 GTTAAACAACTGCCAATGTAATTTGTT 58.392 29.630 0.00 0.00 32.83 2.83
3667 5195 6.368243 CCAATGTAATTTGTTGTTGCTGCATA 59.632 34.615 1.84 0.00 31.22 3.14
3668 5196 7.095313 CCAATGTAATTTGTTGTTGCTGCATAA 60.095 33.333 1.84 0.00 31.22 1.90
3680 5208 5.589855 TGTTGCTGCATAAGTATTACTGCAT 59.410 36.000 1.84 0.00 41.04 3.96
3698 5229 6.356556 ACTGCATCATTTAAGCTGTACCATA 58.643 36.000 0.00 0.00 38.42 2.74
3753 5284 5.819379 GTCATCTTCATGGCTTTGTGAGATA 59.181 40.000 0.00 0.00 31.23 1.98
3754 5285 6.317140 GTCATCTTCATGGCTTTGTGAGATAA 59.683 38.462 0.00 0.00 31.23 1.75
3818 5349 5.295292 CAGCCTATCTCACTGTTATGTTTGG 59.705 44.000 0.00 0.00 0.00 3.28
3826 5357 5.630121 TCACTGTTATGTTTGGGATCTGTT 58.370 37.500 0.00 0.00 0.00 3.16
3827 5358 6.774673 TCACTGTTATGTTTGGGATCTGTTA 58.225 36.000 0.00 0.00 0.00 2.41
3828 5359 6.878923 TCACTGTTATGTTTGGGATCTGTTAG 59.121 38.462 0.00 0.00 0.00 2.34
3829 5360 6.878923 CACTGTTATGTTTGGGATCTGTTAGA 59.121 38.462 0.00 0.00 0.00 2.10
3830 5361 7.065085 CACTGTTATGTTTGGGATCTGTTAGAG 59.935 40.741 0.00 0.00 0.00 2.43
3831 5362 7.016153 TGTTATGTTTGGGATCTGTTAGAGT 57.984 36.000 0.00 0.00 0.00 3.24
3832 5363 8.141298 TGTTATGTTTGGGATCTGTTAGAGTA 57.859 34.615 0.00 0.00 0.00 2.59
3833 5364 8.768397 TGTTATGTTTGGGATCTGTTAGAGTAT 58.232 33.333 0.00 0.00 0.00 2.12
3834 5365 9.046296 GTTATGTTTGGGATCTGTTAGAGTATG 57.954 37.037 0.00 0.00 0.00 2.39
3835 5366 6.620877 TGTTTGGGATCTGTTAGAGTATGT 57.379 37.500 0.00 0.00 0.00 2.29
3836 5367 7.727578 TGTTTGGGATCTGTTAGAGTATGTA 57.272 36.000 0.00 0.00 0.00 2.29
3837 5368 8.141298 TGTTTGGGATCTGTTAGAGTATGTAA 57.859 34.615 0.00 0.00 0.00 2.41
3838 5369 8.768397 TGTTTGGGATCTGTTAGAGTATGTAAT 58.232 33.333 0.00 0.00 0.00 1.89
3839 5370 9.046296 GTTTGGGATCTGTTAGAGTATGTAATG 57.954 37.037 0.00 0.00 0.00 1.90
3840 5371 7.303182 TGGGATCTGTTAGAGTATGTAATGG 57.697 40.000 0.00 0.00 0.00 3.16
3841 5372 7.073208 TGGGATCTGTTAGAGTATGTAATGGA 58.927 38.462 0.00 0.00 0.00 3.41
3842 5373 7.015292 TGGGATCTGTTAGAGTATGTAATGGAC 59.985 40.741 0.00 0.00 0.00 4.02
3843 5374 7.379750 GGATCTGTTAGAGTATGTAATGGACC 58.620 42.308 0.00 0.00 0.00 4.46
3844 5375 7.233757 GGATCTGTTAGAGTATGTAATGGACCT 59.766 40.741 0.00 0.00 0.00 3.85
3845 5376 9.298250 GATCTGTTAGAGTATGTAATGGACCTA 57.702 37.037 0.00 0.00 0.00 3.08
3846 5377 9.656323 ATCTGTTAGAGTATGTAATGGACCTAA 57.344 33.333 0.00 0.00 0.00 2.69
3847 5378 9.656323 TCTGTTAGAGTATGTAATGGACCTAAT 57.344 33.333 0.00 0.00 0.00 1.73
3848 5379 9.698309 CTGTTAGAGTATGTAATGGACCTAATG 57.302 37.037 0.00 0.00 0.00 1.90
3849 5380 8.647796 TGTTAGAGTATGTAATGGACCTAATGG 58.352 37.037 0.00 0.00 39.83 3.16
3850 5381 6.115448 AGAGTATGTAATGGACCTAATGGC 57.885 41.667 0.00 0.00 36.63 4.40
3851 5382 5.013183 AGAGTATGTAATGGACCTAATGGCC 59.987 44.000 0.00 0.00 36.63 5.36
3852 5383 4.913968 AGTATGTAATGGACCTAATGGCCT 59.086 41.667 3.32 0.00 36.63 5.19
3853 5384 3.576078 TGTAATGGACCTAATGGCCTG 57.424 47.619 3.32 0.00 36.63 4.85
3854 5385 2.230660 GTAATGGACCTAATGGCCTGC 58.769 52.381 3.32 0.00 36.63 4.85
3855 5386 0.466189 AATGGACCTAATGGCCTGCG 60.466 55.000 3.32 0.00 36.63 5.18
3856 5387 2.902343 GGACCTAATGGCCTGCGC 60.902 66.667 3.32 0.00 36.63 6.09
3857 5388 2.190578 GACCTAATGGCCTGCGCT 59.809 61.111 9.73 0.00 36.63 5.92
3858 5389 2.124570 ACCTAATGGCCTGCGCTG 60.125 61.111 9.73 8.47 36.63 5.18
3859 5390 2.903855 CCTAATGGCCTGCGCTGG 60.904 66.667 27.42 27.42 34.44 4.85
3866 5397 4.602259 GCCTGCGCTGGCGGTATA 62.602 66.667 37.39 0.00 44.37 1.47
3867 5398 2.356313 CCTGCGCTGGCGGTATAG 60.356 66.667 21.02 0.00 44.37 1.31
3868 5399 2.417516 CTGCGCTGGCGGTATAGT 59.582 61.111 16.61 0.00 44.10 2.12
3869 5400 1.661821 CTGCGCTGGCGGTATAGTC 60.662 63.158 16.61 0.00 44.10 2.59
3870 5401 2.355956 GCGCTGGCGGTATAGTCC 60.356 66.667 16.61 0.00 40.19 3.85
3888 5419 4.933505 GTCCGCTAGACTTAGGGTTAAT 57.066 45.455 0.00 0.00 42.69 1.40
3889 5420 5.273674 GTCCGCTAGACTTAGGGTTAATT 57.726 43.478 0.00 0.00 42.69 1.40
3890 5421 6.396829 GTCCGCTAGACTTAGGGTTAATTA 57.603 41.667 0.00 0.00 42.69 1.40
3891 5422 6.445475 GTCCGCTAGACTTAGGGTTAATTAG 58.555 44.000 0.00 0.00 42.69 1.73
3892 5423 6.040278 GTCCGCTAGACTTAGGGTTAATTAGT 59.960 42.308 0.00 0.00 42.69 2.24
3893 5424 6.040166 TCCGCTAGACTTAGGGTTAATTAGTG 59.960 42.308 0.00 0.00 37.97 2.74
3894 5425 6.040166 CCGCTAGACTTAGGGTTAATTAGTGA 59.960 42.308 0.00 0.00 37.97 3.41
3895 5426 7.255871 CCGCTAGACTTAGGGTTAATTAGTGAT 60.256 40.741 0.00 0.00 37.97 3.06
3896 5427 8.790718 CGCTAGACTTAGGGTTAATTAGTGATA 58.209 37.037 0.00 0.00 35.67 2.15
3903 5434 9.257651 CTTAGGGTTAATTAGTGATAAAGGTCG 57.742 37.037 0.00 0.00 0.00 4.79
3904 5435 6.053650 AGGGTTAATTAGTGATAAAGGTCGC 58.946 40.000 0.00 0.00 0.00 5.19
3905 5436 6.053650 GGGTTAATTAGTGATAAAGGTCGCT 58.946 40.000 0.00 0.00 41.51 4.93
3906 5437 6.541278 GGGTTAATTAGTGATAAAGGTCGCTT 59.459 38.462 0.00 0.00 39.51 4.68
3907 5438 7.712205 GGGTTAATTAGTGATAAAGGTCGCTTA 59.288 37.037 0.00 0.00 39.51 3.09
3908 5439 8.546244 GGTTAATTAGTGATAAAGGTCGCTTAC 58.454 37.037 0.00 0.00 39.51 2.34
3948 5479 0.400594 AAAGGTCGCTTGCTTAGGGT 59.599 50.000 4.03 0.00 37.99 4.34
3958 5489 4.324267 GCTTGCTTAGGGTTCAAGTAAGA 58.676 43.478 14.47 0.00 44.00 2.10
3962 5493 7.523873 GCTTGCTTAGGGTTCAAGTAAGAATTT 60.524 37.037 14.47 0.00 44.00 1.82
4106 5640 1.152735 TCTCGCGCCCTCCTTCTAT 60.153 57.895 0.00 0.00 0.00 1.98
4112 5646 0.683973 CGCCCTCCTTCTATCAGCAT 59.316 55.000 0.00 0.00 0.00 3.79
4160 5694 2.673893 CGGTTCGATCATGTCTTCACCA 60.674 50.000 0.00 0.00 0.00 4.17
4161 5695 3.535561 GGTTCGATCATGTCTTCACCAT 58.464 45.455 0.00 0.00 0.00 3.55
4169 5703 0.109532 TGTCTTCACCATCGCCCAAA 59.890 50.000 0.00 0.00 0.00 3.28
4187 5721 4.069232 CCGTCTCTTCCGCTGCCA 62.069 66.667 0.00 0.00 0.00 4.92
4196 5730 4.007644 CCGCTGCCAGTCACCTCA 62.008 66.667 0.00 0.00 0.00 3.86
4477 6012 1.975407 GTTGCAGCTGCCATCCACT 60.975 57.895 34.64 0.00 41.18 4.00
4482 6017 2.441532 GCTGCCATCCACTGCCAT 60.442 61.111 0.00 0.00 0.00 4.40
4567 6102 4.765449 CTGCAGCAGCCACCGCTA 62.765 66.667 10.14 0.00 46.25 4.26
4572 6107 2.047274 GCAGCCACCGCTAGTCAA 60.047 61.111 0.00 0.00 46.25 3.18
4580 6115 2.711922 CCGCTAGTCAACTCCGGCT 61.712 63.158 0.00 0.00 35.35 5.52
4585 6120 4.373116 GTCAACTCCGGCTCCGCA 62.373 66.667 0.00 0.00 38.24 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 4.360951 TCCGTACTCCTGGAACATTTTT 57.639 40.909 0.00 0.00 38.20 1.94
121 122 4.360951 TTCCGTACTCCTGGAACATTTT 57.639 40.909 0.00 0.00 39.29 1.82
122 123 4.360951 TTTCCGTACTCCTGGAACATTT 57.639 40.909 0.00 0.00 43.68 2.32
123 124 4.360951 TTTTCCGTACTCCTGGAACATT 57.639 40.909 0.00 0.00 43.68 2.71
124 125 4.360951 TTTTTCCGTACTCCTGGAACAT 57.639 40.909 0.00 0.00 43.68 2.71
125 126 3.842007 TTTTTCCGTACTCCTGGAACA 57.158 42.857 0.00 0.00 43.68 3.18
185 186 9.535878 ACATTTTAAAATACACGGTGAACATTT 57.464 25.926 16.29 13.22 0.00 2.32
186 187 9.535878 AACATTTTAAAATACACGGTGAACATT 57.464 25.926 16.29 8.15 0.00 2.71
190 191 9.460906 GGTTAACATTTTAAAATACACGGTGAA 57.539 29.630 16.29 4.03 0.00 3.18
191 192 8.627403 TGGTTAACATTTTAAAATACACGGTGA 58.373 29.630 16.29 0.00 0.00 4.02
192 193 8.798748 TGGTTAACATTTTAAAATACACGGTG 57.201 30.769 12.98 6.58 0.00 4.94
193 194 9.413048 CATGGTTAACATTTTAAAATACACGGT 57.587 29.630 12.98 4.33 37.84 4.83
194 195 9.413048 ACATGGTTAACATTTTAAAATACACGG 57.587 29.630 12.98 3.72 37.84 4.94
391 392 9.979578 TTTTAGTACACATTCTGCATTTTTCAT 57.020 25.926 0.00 0.00 0.00 2.57
392 393 9.809096 TTTTTAGTACACATTCTGCATTTTTCA 57.191 25.926 0.00 0.00 0.00 2.69
415 416 7.227711 GGGTTTTTAACACATGCCTACATTTTT 59.772 33.333 0.00 0.00 32.87 1.94
416 417 6.708502 GGGTTTTTAACACATGCCTACATTTT 59.291 34.615 0.00 0.00 32.87 1.82
417 418 6.227522 GGGTTTTTAACACATGCCTACATTT 58.772 36.000 0.00 0.00 32.87 2.32
418 419 5.565834 CGGGTTTTTAACACATGCCTACATT 60.566 40.000 0.00 0.00 33.25 2.71
419 420 4.082463 CGGGTTTTTAACACATGCCTACAT 60.082 41.667 0.00 0.00 33.25 2.29
420 421 3.253677 CGGGTTTTTAACACATGCCTACA 59.746 43.478 0.00 0.00 33.25 2.74
421 422 3.502979 TCGGGTTTTTAACACATGCCTAC 59.497 43.478 0.00 0.00 33.25 3.18
422 423 3.752665 TCGGGTTTTTAACACATGCCTA 58.247 40.909 0.00 0.00 33.25 3.93
423 424 2.588620 TCGGGTTTTTAACACATGCCT 58.411 42.857 0.00 0.00 33.25 4.75
424 425 3.057174 TCATCGGGTTTTTAACACATGCC 60.057 43.478 0.00 0.00 33.25 4.40
425 426 4.167554 TCATCGGGTTTTTAACACATGC 57.832 40.909 0.00 0.00 33.25 4.06
426 427 6.212955 ACTTTCATCGGGTTTTTAACACATG 58.787 36.000 0.00 0.00 33.25 3.21
427 428 6.399639 ACTTTCATCGGGTTTTTAACACAT 57.600 33.333 0.00 0.00 33.25 3.21
428 429 5.838531 ACTTTCATCGGGTTTTTAACACA 57.161 34.783 0.00 0.00 33.25 3.72
429 430 8.631676 TTTTACTTTCATCGGGTTTTTAACAC 57.368 30.769 0.00 0.00 0.00 3.32
467 468 9.898152 TCAGTTTTCATTTTTCTTATTTTGGGT 57.102 25.926 0.00 0.00 0.00 4.51
476 477 9.500785 TGGTTTTCTTCAGTTTTCATTTTTCTT 57.499 25.926 0.00 0.00 0.00 2.52
477 478 9.500785 TTGGTTTTCTTCAGTTTTCATTTTTCT 57.499 25.926 0.00 0.00 0.00 2.52
480 481 8.183536 GCATTGGTTTTCTTCAGTTTTCATTTT 58.816 29.630 0.00 0.00 0.00 1.82
481 482 7.336427 TGCATTGGTTTTCTTCAGTTTTCATTT 59.664 29.630 0.00 0.00 0.00 2.32
482 483 6.822676 TGCATTGGTTTTCTTCAGTTTTCATT 59.177 30.769 0.00 0.00 0.00 2.57
483 484 6.347696 TGCATTGGTTTTCTTCAGTTTTCAT 58.652 32.000 0.00 0.00 0.00 2.57
484 485 5.728471 TGCATTGGTTTTCTTCAGTTTTCA 58.272 33.333 0.00 0.00 0.00 2.69
485 486 6.660887 TTGCATTGGTTTTCTTCAGTTTTC 57.339 33.333 0.00 0.00 0.00 2.29
486 487 7.390162 TCTTTTGCATTGGTTTTCTTCAGTTTT 59.610 29.630 0.00 0.00 0.00 2.43
487 488 6.878389 TCTTTTGCATTGGTTTTCTTCAGTTT 59.122 30.769 0.00 0.00 0.00 2.66
488 489 6.405538 TCTTTTGCATTGGTTTTCTTCAGTT 58.594 32.000 0.00 0.00 0.00 3.16
489 490 5.976458 TCTTTTGCATTGGTTTTCTTCAGT 58.024 33.333 0.00 0.00 0.00 3.41
490 491 6.907206 TTCTTTTGCATTGGTTTTCTTCAG 57.093 33.333 0.00 0.00 0.00 3.02
491 492 7.862512 AATTCTTTTGCATTGGTTTTCTTCA 57.137 28.000 0.00 0.00 0.00 3.02
494 495 8.344831 GCTTTAATTCTTTTGCATTGGTTTTCT 58.655 29.630 0.00 0.00 0.00 2.52
495 496 8.127954 TGCTTTAATTCTTTTGCATTGGTTTTC 58.872 29.630 0.00 0.00 0.00 2.29
496 497 7.994194 TGCTTTAATTCTTTTGCATTGGTTTT 58.006 26.923 0.00 0.00 0.00 2.43
497 498 7.565323 TGCTTTAATTCTTTTGCATTGGTTT 57.435 28.000 0.00 0.00 0.00 3.27
498 499 7.565323 TTGCTTTAATTCTTTTGCATTGGTT 57.435 28.000 0.00 0.00 0.00 3.67
499 500 7.444792 TCATTGCTTTAATTCTTTTGCATTGGT 59.555 29.630 0.00 0.00 34.58 3.67
500 501 7.808672 TCATTGCTTTAATTCTTTTGCATTGG 58.191 30.769 0.00 0.00 34.58 3.16
501 502 9.666626 TTTCATTGCTTTAATTCTTTTGCATTG 57.333 25.926 0.00 0.00 34.90 2.82
503 504 9.667989 GTTTTCATTGCTTTAATTCTTTTGCAT 57.332 25.926 0.00 0.00 0.00 3.96
504 505 8.127954 GGTTTTCATTGCTTTAATTCTTTTGCA 58.872 29.630 0.00 0.00 0.00 4.08
505 506 8.127954 TGGTTTTCATTGCTTTAATTCTTTTGC 58.872 29.630 0.00 0.00 0.00 3.68
508 509 9.612066 TCTTGGTTTTCATTGCTTTAATTCTTT 57.388 25.926 0.00 0.00 0.00 2.52
509 510 9.612066 TTCTTGGTTTTCATTGCTTTAATTCTT 57.388 25.926 0.00 0.00 0.00 2.52
510 511 9.612066 TTTCTTGGTTTTCATTGCTTTAATTCT 57.388 25.926 0.00 0.00 0.00 2.40
537 538 7.272037 TCGGCTTTCTATGTTTTCTCTTTTT 57.728 32.000 0.00 0.00 0.00 1.94
538 539 6.877611 TCGGCTTTCTATGTTTTCTCTTTT 57.122 33.333 0.00 0.00 0.00 2.27
539 540 6.655003 TCATCGGCTTTCTATGTTTTCTCTTT 59.345 34.615 0.00 0.00 0.00 2.52
540 541 6.173339 TCATCGGCTTTCTATGTTTTCTCTT 58.827 36.000 0.00 0.00 0.00 2.85
541 542 5.734720 TCATCGGCTTTCTATGTTTTCTCT 58.265 37.500 0.00 0.00 0.00 3.10
542 543 6.422776 TTCATCGGCTTTCTATGTTTTCTC 57.577 37.500 0.00 0.00 0.00 2.87
543 544 6.817765 TTTCATCGGCTTTCTATGTTTTCT 57.182 33.333 0.00 0.00 0.00 2.52
544 545 7.084486 AGTTTTCATCGGCTTTCTATGTTTTC 58.916 34.615 0.00 0.00 0.00 2.29
545 546 6.981722 AGTTTTCATCGGCTTTCTATGTTTT 58.018 32.000 0.00 0.00 0.00 2.43
546 547 6.575162 AGTTTTCATCGGCTTTCTATGTTT 57.425 33.333 0.00 0.00 0.00 2.83
547 548 7.606456 TCTTAGTTTTCATCGGCTTTCTATGTT 59.394 33.333 0.00 0.00 0.00 2.71
548 549 7.103641 TCTTAGTTTTCATCGGCTTTCTATGT 58.896 34.615 0.00 0.00 0.00 2.29
549 550 7.539712 TCTTAGTTTTCATCGGCTTTCTATG 57.460 36.000 0.00 0.00 0.00 2.23
550 551 8.561738 TTTCTTAGTTTTCATCGGCTTTCTAT 57.438 30.769 0.00 0.00 0.00 1.98
551 552 7.876068 TCTTTCTTAGTTTTCATCGGCTTTCTA 59.124 33.333 0.00 0.00 0.00 2.10
552 553 6.710744 TCTTTCTTAGTTTTCATCGGCTTTCT 59.289 34.615 0.00 0.00 0.00 2.52
553 554 6.899114 TCTTTCTTAGTTTTCATCGGCTTTC 58.101 36.000 0.00 0.00 0.00 2.62
554 555 6.877611 TCTTTCTTAGTTTTCATCGGCTTT 57.122 33.333 0.00 0.00 0.00 3.51
555 556 6.877611 TTCTTTCTTAGTTTTCATCGGCTT 57.122 33.333 0.00 0.00 0.00 4.35
556 557 6.710744 TCTTTCTTTCTTAGTTTTCATCGGCT 59.289 34.615 0.00 0.00 0.00 5.52
557 558 6.899114 TCTTTCTTTCTTAGTTTTCATCGGC 58.101 36.000 0.00 0.00 0.00 5.54
558 559 9.730420 TTTTCTTTCTTTCTTAGTTTTCATCGG 57.270 29.630 0.00 0.00 0.00 4.18
561 562 9.516314 CGGTTTTCTTTCTTTCTTAGTTTTCAT 57.484 29.630 0.00 0.00 0.00 2.57
562 563 8.732531 TCGGTTTTCTTTCTTTCTTAGTTTTCA 58.267 29.630 0.00 0.00 0.00 2.69
563 564 9.563898 TTCGGTTTTCTTTCTTTCTTAGTTTTC 57.436 29.630 0.00 0.00 0.00 2.29
564 565 9.569167 CTTCGGTTTTCTTTCTTTCTTAGTTTT 57.431 29.630 0.00 0.00 0.00 2.43
565 566 8.953313 TCTTCGGTTTTCTTTCTTTCTTAGTTT 58.047 29.630 0.00 0.00 0.00 2.66
566 567 8.502105 TCTTCGGTTTTCTTTCTTTCTTAGTT 57.498 30.769 0.00 0.00 0.00 2.24
567 568 8.678593 ATCTTCGGTTTTCTTTCTTTCTTAGT 57.321 30.769 0.00 0.00 0.00 2.24
574 575 9.734984 TCCTATTTATCTTCGGTTTTCTTTCTT 57.265 29.630 0.00 0.00 0.00 2.52
575 576 9.734984 TTCCTATTTATCTTCGGTTTTCTTTCT 57.265 29.630 0.00 0.00 0.00 2.52
578 579 8.448615 CGTTTCCTATTTATCTTCGGTTTTCTT 58.551 33.333 0.00 0.00 0.00 2.52
579 580 7.820872 TCGTTTCCTATTTATCTTCGGTTTTCT 59.179 33.333 0.00 0.00 0.00 2.52
580 581 7.967178 TCGTTTCCTATTTATCTTCGGTTTTC 58.033 34.615 0.00 0.00 0.00 2.29
581 582 7.910441 TCGTTTCCTATTTATCTTCGGTTTT 57.090 32.000 0.00 0.00 0.00 2.43
582 583 7.910441 TTCGTTTCCTATTTATCTTCGGTTT 57.090 32.000 0.00 0.00 0.00 3.27
583 584 7.910441 TTTCGTTTCCTATTTATCTTCGGTT 57.090 32.000 0.00 0.00 0.00 4.44
584 585 7.910441 TTTTCGTTTCCTATTTATCTTCGGT 57.090 32.000 0.00 0.00 0.00 4.69
596 597 9.171701 CGTTGTCATTTTATTTTTCGTTTCCTA 57.828 29.630 0.00 0.00 0.00 2.94
597 598 7.916450 TCGTTGTCATTTTATTTTTCGTTTCCT 59.084 29.630 0.00 0.00 0.00 3.36
598 599 8.052313 TCGTTGTCATTTTATTTTTCGTTTCC 57.948 30.769 0.00 0.00 0.00 3.13
599 600 9.549923 CTTCGTTGTCATTTTATTTTTCGTTTC 57.450 29.630 0.00 0.00 0.00 2.78
600 601 9.291664 TCTTCGTTGTCATTTTATTTTTCGTTT 57.708 25.926 0.00 0.00 0.00 3.60
601 602 8.844441 TCTTCGTTGTCATTTTATTTTTCGTT 57.156 26.923 0.00 0.00 0.00 3.85
602 603 8.844441 TTCTTCGTTGTCATTTTATTTTTCGT 57.156 26.923 0.00 0.00 0.00 3.85
603 604 9.763979 CTTTCTTCGTTGTCATTTTATTTTTCG 57.236 29.630 0.00 0.00 0.00 3.46
607 608 9.796120 TGTTCTTTCTTCGTTGTCATTTTATTT 57.204 25.926 0.00 0.00 0.00 1.40
608 609 9.796120 TTGTTCTTTCTTCGTTGTCATTTTATT 57.204 25.926 0.00 0.00 0.00 1.40
609 610 9.796120 TTTGTTCTTTCTTCGTTGTCATTTTAT 57.204 25.926 0.00 0.00 0.00 1.40
610 611 9.627395 TTTTGTTCTTTCTTCGTTGTCATTTTA 57.373 25.926 0.00 0.00 0.00 1.52
611 612 8.527567 TTTTGTTCTTTCTTCGTTGTCATTTT 57.472 26.923 0.00 0.00 0.00 1.82
612 613 8.026607 TCTTTTGTTCTTTCTTCGTTGTCATTT 58.973 29.630 0.00 0.00 0.00 2.32
613 614 7.535139 TCTTTTGTTCTTTCTTCGTTGTCATT 58.465 30.769 0.00 0.00 0.00 2.57
614 615 7.083875 TCTTTTGTTCTTTCTTCGTTGTCAT 57.916 32.000 0.00 0.00 0.00 3.06
615 616 6.489127 TCTTTTGTTCTTTCTTCGTTGTCA 57.511 33.333 0.00 0.00 0.00 3.58
616 617 7.790861 TTTCTTTTGTTCTTTCTTCGTTGTC 57.209 32.000 0.00 0.00 0.00 3.18
617 618 8.079809 TCTTTTCTTTTGTTCTTTCTTCGTTGT 58.920 29.630 0.00 0.00 0.00 3.32
618 619 8.447787 TCTTTTCTTTTGTTCTTTCTTCGTTG 57.552 30.769 0.00 0.00 0.00 4.10
619 620 9.471084 TTTCTTTTCTTTTGTTCTTTCTTCGTT 57.529 25.926 0.00 0.00 0.00 3.85
620 621 9.471084 TTTTCTTTTCTTTTGTTCTTTCTTCGT 57.529 25.926 0.00 0.00 0.00 3.85
644 645 9.961264 TTTTATTCCTGGTTTTAACTGGTTTTT 57.039 25.926 0.00 0.00 0.00 1.94
645 646 9.386010 GTTTTATTCCTGGTTTTAACTGGTTTT 57.614 29.630 0.00 0.00 0.00 2.43
646 647 8.541234 TGTTTTATTCCTGGTTTTAACTGGTTT 58.459 29.630 0.00 0.00 0.00 3.27
647 648 8.080363 TGTTTTATTCCTGGTTTTAACTGGTT 57.920 30.769 0.00 0.00 0.00 3.67
648 649 7.663043 TGTTTTATTCCTGGTTTTAACTGGT 57.337 32.000 0.00 0.00 0.00 4.00
649 650 8.950208 TTTGTTTTATTCCTGGTTTTAACTGG 57.050 30.769 0.00 0.00 0.00 4.00
688 689 9.936759 TCTTTGGTTATTTTGTTTCTTCAAAGT 57.063 25.926 0.00 0.00 39.37 2.66
695 696 9.225436 TGCTTTTTCTTTGGTTATTTTGTTTCT 57.775 25.926 0.00 0.00 0.00 2.52
696 697 9.833182 TTGCTTTTTCTTTGGTTATTTTGTTTC 57.167 25.926 0.00 0.00 0.00 2.78
706 707 9.612066 TCATTTCTATTTGCTTTTTCTTTGGTT 57.388 25.926 0.00 0.00 0.00 3.67
707 708 9.612066 TTCATTTCTATTTGCTTTTTCTTTGGT 57.388 25.926 0.00 0.00 0.00 3.67
724 725 8.878769 GCCTGTTTGTTTTCTTTTTCATTTCTA 58.121 29.630 0.00 0.00 0.00 2.10
725 726 7.390162 TGCCTGTTTGTTTTCTTTTTCATTTCT 59.610 29.630 0.00 0.00 0.00 2.52
726 727 7.525759 TGCCTGTTTGTTTTCTTTTTCATTTC 58.474 30.769 0.00 0.00 0.00 2.17
727 728 7.446001 TGCCTGTTTGTTTTCTTTTTCATTT 57.554 28.000 0.00 0.00 0.00 2.32
728 729 7.446001 TTGCCTGTTTGTTTTCTTTTTCATT 57.554 28.000 0.00 0.00 0.00 2.57
729 730 7.390162 TCTTTGCCTGTTTGTTTTCTTTTTCAT 59.610 29.630 0.00 0.00 0.00 2.57
730 731 6.708054 TCTTTGCCTGTTTGTTTTCTTTTTCA 59.292 30.769 0.00 0.00 0.00 2.69
731 732 7.127917 TCTTTGCCTGTTTGTTTTCTTTTTC 57.872 32.000 0.00 0.00 0.00 2.29
732 733 7.503521 TTCTTTGCCTGTTTGTTTTCTTTTT 57.496 28.000 0.00 0.00 0.00 1.94
733 734 7.503521 TTTCTTTGCCTGTTTGTTTTCTTTT 57.496 28.000 0.00 0.00 0.00 2.27
734 735 7.359595 GTTTTCTTTGCCTGTTTGTTTTCTTT 58.640 30.769 0.00 0.00 0.00 2.52
735 736 6.072728 GGTTTTCTTTGCCTGTTTGTTTTCTT 60.073 34.615 0.00 0.00 0.00 2.52
736 737 5.411361 GGTTTTCTTTGCCTGTTTGTTTTCT 59.589 36.000 0.00 0.00 0.00 2.52
737 738 5.180304 TGGTTTTCTTTGCCTGTTTGTTTTC 59.820 36.000 0.00 0.00 0.00 2.29
738 739 5.066593 TGGTTTTCTTTGCCTGTTTGTTTT 58.933 33.333 0.00 0.00 0.00 2.43
739 740 4.646572 TGGTTTTCTTTGCCTGTTTGTTT 58.353 34.783 0.00 0.00 0.00 2.83
740 741 4.278975 TGGTTTTCTTTGCCTGTTTGTT 57.721 36.364 0.00 0.00 0.00 2.83
741 742 3.971245 TGGTTTTCTTTGCCTGTTTGT 57.029 38.095 0.00 0.00 0.00 2.83
742 743 4.874966 TCATTGGTTTTCTTTGCCTGTTTG 59.125 37.500 0.00 0.00 0.00 2.93
743 744 5.096443 TCATTGGTTTTCTTTGCCTGTTT 57.904 34.783 0.00 0.00 0.00 2.83
744 745 4.751767 TCATTGGTTTTCTTTGCCTGTT 57.248 36.364 0.00 0.00 0.00 3.16
745 746 4.751767 TTCATTGGTTTTCTTTGCCTGT 57.248 36.364 0.00 0.00 0.00 4.00
746 747 6.434018 TTTTTCATTGGTTTTCTTTGCCTG 57.566 33.333 0.00 0.00 0.00 4.85
766 767 9.126151 TCCTTCTTTTGGTTTCTTTTTGTTTTT 57.874 25.926 0.00 0.00 0.00 1.94
767 768 8.684386 TCCTTCTTTTGGTTTCTTTTTGTTTT 57.316 26.923 0.00 0.00 0.00 2.43
768 769 8.564574 GTTCCTTCTTTTGGTTTCTTTTTGTTT 58.435 29.630 0.00 0.00 0.00 2.83
769 770 7.717436 TGTTCCTTCTTTTGGTTTCTTTTTGTT 59.283 29.630 0.00 0.00 0.00 2.83
770 771 7.220740 TGTTCCTTCTTTTGGTTTCTTTTTGT 58.779 30.769 0.00 0.00 0.00 2.83
771 772 7.665561 TGTTCCTTCTTTTGGTTTCTTTTTG 57.334 32.000 0.00 0.00 0.00 2.44
772 773 8.684386 TTTGTTCCTTCTTTTGGTTTCTTTTT 57.316 26.923 0.00 0.00 0.00 1.94
773 774 8.684386 TTTTGTTCCTTCTTTTGGTTTCTTTT 57.316 26.923 0.00 0.00 0.00 2.27
774 775 8.684386 TTTTTGTTCCTTCTTTTGGTTTCTTT 57.316 26.923 0.00 0.00 0.00 2.52
796 797 7.226918 TGTCTTTCTTTTTGGTTTTCCGTTTTT 59.773 29.630 0.00 0.00 44.36 1.94
797 798 6.706716 TGTCTTTCTTTTTGGTTTTCCGTTTT 59.293 30.769 0.00 0.00 44.36 2.43
798 799 6.146510 GTGTCTTTCTTTTTGGTTTTCCGTTT 59.853 34.615 0.00 0.00 44.36 3.60
799 800 5.636121 GTGTCTTTCTTTTTGGTTTTCCGTT 59.364 36.000 0.00 0.00 44.36 4.44
800 801 5.047590 AGTGTCTTTCTTTTTGGTTTTCCGT 60.048 36.000 0.00 0.00 44.36 4.69
801 802 5.407502 AGTGTCTTTCTTTTTGGTTTTCCG 58.592 37.500 0.00 0.00 44.36 4.30
802 803 7.042725 GCATAGTGTCTTTCTTTTTGGTTTTCC 60.043 37.037 0.00 0.00 41.14 3.13
803 804 7.491048 TGCATAGTGTCTTTCTTTTTGGTTTTC 59.509 33.333 0.00 0.00 0.00 2.29
804 805 7.327214 TGCATAGTGTCTTTCTTTTTGGTTTT 58.673 30.769 0.00 0.00 0.00 2.43
805 806 6.872920 TGCATAGTGTCTTTCTTTTTGGTTT 58.127 32.000 0.00 0.00 0.00 3.27
806 807 6.463995 TGCATAGTGTCTTTCTTTTTGGTT 57.536 33.333 0.00 0.00 0.00 3.67
807 808 6.463995 TTGCATAGTGTCTTTCTTTTTGGT 57.536 33.333 0.00 0.00 0.00 3.67
808 809 7.769272 TTTTGCATAGTGTCTTTCTTTTTGG 57.231 32.000 0.00 0.00 0.00 3.28
811 812 9.683069 CACTATTTTGCATAGTGTCTTTCTTTT 57.317 29.630 15.03 0.00 43.80 2.27
812 813 9.066892 TCACTATTTTGCATAGTGTCTTTCTTT 57.933 29.630 20.15 0.00 46.93 2.52
813 814 8.621532 TCACTATTTTGCATAGTGTCTTTCTT 57.378 30.769 20.15 0.00 46.93 2.52
814 815 8.621532 TTCACTATTTTGCATAGTGTCTTTCT 57.378 30.769 20.15 0.00 46.93 2.52
815 816 9.677567 TTTTCACTATTTTGCATAGTGTCTTTC 57.322 29.630 20.15 0.00 46.93 2.62
817 818 9.463443 GTTTTTCACTATTTTGCATAGTGTCTT 57.537 29.630 20.15 0.00 46.93 3.01
818 819 8.629158 TGTTTTTCACTATTTTGCATAGTGTCT 58.371 29.630 20.15 0.00 46.93 3.41
819 820 8.795786 TGTTTTTCACTATTTTGCATAGTGTC 57.204 30.769 20.15 10.75 46.93 3.67
820 821 9.762933 ATTGTTTTTCACTATTTTGCATAGTGT 57.237 25.926 20.15 2.15 46.93 3.55
822 823 8.711457 GCATTGTTTTTCACTATTTTGCATAGT 58.289 29.630 0.00 0.00 35.39 2.12
823 824 8.928733 AGCATTGTTTTTCACTATTTTGCATAG 58.071 29.630 0.00 0.00 0.00 2.23
824 825 8.830201 AGCATTGTTTTTCACTATTTTGCATA 57.170 26.923 0.00 0.00 0.00 3.14
825 826 7.733402 AGCATTGTTTTTCACTATTTTGCAT 57.267 28.000 0.00 0.00 0.00 3.96
826 827 7.170658 GGTAGCATTGTTTTTCACTATTTTGCA 59.829 33.333 0.00 0.00 0.00 4.08
827 828 7.170658 TGGTAGCATTGTTTTTCACTATTTTGC 59.829 33.333 0.00 0.00 0.00 3.68
828 829 8.586570 TGGTAGCATTGTTTTTCACTATTTTG 57.413 30.769 0.00 0.00 0.00 2.44
831 832 9.243105 ACTATGGTAGCATTGTTTTTCACTATT 57.757 29.630 13.49 0.00 0.00 1.73
832 833 8.677300 CACTATGGTAGCATTGTTTTTCACTAT 58.323 33.333 17.46 0.00 0.00 2.12
833 834 7.880713 TCACTATGGTAGCATTGTTTTTCACTA 59.119 33.333 17.46 0.00 0.00 2.74
834 835 6.714810 TCACTATGGTAGCATTGTTTTTCACT 59.285 34.615 17.46 0.00 0.00 3.41
835 836 6.908825 TCACTATGGTAGCATTGTTTTTCAC 58.091 36.000 17.46 0.00 0.00 3.18
836 837 6.714810 ACTCACTATGGTAGCATTGTTTTTCA 59.285 34.615 17.46 0.00 0.00 2.69
837 838 7.145932 ACTCACTATGGTAGCATTGTTTTTC 57.854 36.000 17.46 0.00 0.00 2.29
838 839 6.151144 GGACTCACTATGGTAGCATTGTTTTT 59.849 38.462 17.46 6.30 0.00 1.94
839 840 5.648092 GGACTCACTATGGTAGCATTGTTTT 59.352 40.000 17.46 6.61 0.00 2.43
840 841 5.186198 GGACTCACTATGGTAGCATTGTTT 58.814 41.667 17.46 6.92 0.00 2.83
841 842 4.680708 CGGACTCACTATGGTAGCATTGTT 60.681 45.833 17.46 5.71 0.00 2.83
842 843 3.181475 CGGACTCACTATGGTAGCATTGT 60.181 47.826 13.49 14.28 0.00 2.71
843 844 3.384668 CGGACTCACTATGGTAGCATTG 58.615 50.000 13.49 13.58 0.00 2.82
844 845 2.224066 GCGGACTCACTATGGTAGCATT 60.224 50.000 13.49 0.00 0.00 3.56
845 846 1.341531 GCGGACTCACTATGGTAGCAT 59.658 52.381 12.78 12.78 0.00 3.79
846 847 0.744874 GCGGACTCACTATGGTAGCA 59.255 55.000 0.00 0.00 0.00 3.49
847 848 0.744874 TGCGGACTCACTATGGTAGC 59.255 55.000 0.00 0.00 0.00 3.58
848 849 1.749063 TGTGCGGACTCACTATGGTAG 59.251 52.381 8.99 0.00 37.81 3.18
849 850 1.749063 CTGTGCGGACTCACTATGGTA 59.251 52.381 8.99 0.00 37.81 3.25
850 851 0.532573 CTGTGCGGACTCACTATGGT 59.467 55.000 8.99 0.00 37.81 3.55
851 852 0.532573 ACTGTGCGGACTCACTATGG 59.467 55.000 8.99 0.00 37.81 2.74
852 853 2.479730 GGTACTGTGCGGACTCACTATG 60.480 54.545 8.99 0.00 37.81 2.23
853 854 1.749634 GGTACTGTGCGGACTCACTAT 59.250 52.381 8.99 0.00 37.81 2.12
854 855 1.171308 GGTACTGTGCGGACTCACTA 58.829 55.000 8.99 0.00 37.81 2.74
855 856 0.539901 AGGTACTGTGCGGACTCACT 60.540 55.000 8.99 0.00 37.18 3.41
856 857 1.171308 TAGGTACTGTGCGGACTCAC 58.829 55.000 8.99 3.25 41.52 3.51
857 858 1.749063 CATAGGTACTGTGCGGACTCA 59.251 52.381 8.99 0.00 41.41 3.41
858 859 1.067212 CCATAGGTACTGTGCGGACTC 59.933 57.143 8.99 0.00 46.53 3.36
859 860 1.112113 CCATAGGTACTGTGCGGACT 58.888 55.000 8.99 0.00 46.53 3.85
860 861 0.529992 GCCATAGGTACTGTGCGGAC 60.530 60.000 0.00 0.00 46.53 4.79
861 862 1.820581 GCCATAGGTACTGTGCGGA 59.179 57.895 0.00 0.00 46.53 5.54
862 863 1.591594 CGCCATAGGTACTGTGCGG 60.592 63.158 0.00 0.00 46.53 5.69
863 864 0.870307 GACGCCATAGGTACTGTGCG 60.870 60.000 11.89 11.89 46.53 5.34
864 865 0.529992 GGACGCCATAGGTACTGTGC 60.530 60.000 0.00 0.00 46.53 4.57
866 867 0.324923 TGGGACGCCATAGGTACTGT 60.325 55.000 0.00 0.00 41.52 3.55
867 868 0.389391 CTGGGACGCCATAGGTACTG 59.611 60.000 0.00 0.00 41.52 2.74
868 869 1.400530 GCTGGGACGCCATAGGTACT 61.401 60.000 0.00 0.00 46.37 2.73
869 870 1.069258 GCTGGGACGCCATAGGTAC 59.931 63.158 0.00 0.00 0.00 3.34
870 871 1.075525 AGCTGGGACGCCATAGGTA 60.076 57.895 0.00 0.00 0.00 3.08
871 872 2.365635 AGCTGGGACGCCATAGGT 60.366 61.111 0.00 0.00 0.00 3.08
872 873 2.109799 CAGCTGGGACGCCATAGG 59.890 66.667 5.57 0.00 0.00 2.57
873 874 2.109799 CCAGCTGGGACGCCATAG 59.890 66.667 26.14 0.00 40.01 2.23
885 886 2.683465 ATGATTGACGGCCCCAGCT 61.683 57.895 0.00 0.00 39.73 4.24
886 887 2.124151 ATGATTGACGGCCCCAGC 60.124 61.111 0.00 0.00 38.76 4.85
887 888 1.825191 CCATGATTGACGGCCCCAG 60.825 63.158 0.00 0.00 0.00 4.45
888 889 2.275089 CCATGATTGACGGCCCCA 59.725 61.111 0.00 0.00 0.00 4.96
889 890 2.519302 CCCATGATTGACGGCCCC 60.519 66.667 0.00 0.00 0.00 5.80
890 891 3.219198 GCCCATGATTGACGGCCC 61.219 66.667 0.00 0.00 35.23 5.80
891 892 3.585990 CGCCCATGATTGACGGCC 61.586 66.667 0.00 0.00 38.19 6.13
892 893 4.256090 GCGCCCATGATTGACGGC 62.256 66.667 0.00 0.00 38.07 5.68
893 894 2.514592 AGCGCCCATGATTGACGG 60.515 61.111 2.29 0.00 0.00 4.79
902 903 1.153289 GATGACAGACAGCGCCCAT 60.153 57.895 2.29 0.00 0.00 4.00
959 960 1.517832 CTCGCCGGAGACCAAGAAT 59.482 57.895 5.05 0.00 43.27 2.40
965 966 2.125106 ATTTGCTCGCCGGAGACC 60.125 61.111 5.05 0.00 43.27 3.85
1223 1240 3.836365 TGGCTACATCAAATCGGATGA 57.164 42.857 9.90 0.00 46.00 2.92
1255 1272 7.439655 GGAGCCGGCAAATTTATCTATATCTAG 59.560 40.741 31.54 0.00 0.00 2.43
1266 1283 4.440826 TTATAGGGAGCCGGCAAATTTA 57.559 40.909 31.54 14.32 0.00 1.40
1269 1286 2.644798 AGATTATAGGGAGCCGGCAAAT 59.355 45.455 31.54 15.89 0.00 2.32
1345 1362 7.199766 ACAATGAAGCGAAAGAATTTAACACA 58.800 30.769 0.00 0.00 39.27 3.72
1366 1383 9.927081 AATTAGGAAATGGAGTTCTGATACAAT 57.073 29.630 0.00 0.00 0.00 2.71
1433 1450 6.431234 GGGCTATAACAAATCATCCTCGATTT 59.569 38.462 0.00 0.00 44.52 2.17
1631 1654 6.946340 TCAGTACATCAAAATTCCTAGCTGA 58.054 36.000 0.00 0.00 0.00 4.26
1646 1669 8.824159 AGTATATGCAAAGTCATCAGTACATC 57.176 34.615 0.00 0.00 0.00 3.06
1730 1755 6.561737 TGAGTGAACAAACACACTAAAACA 57.438 33.333 0.00 0.00 45.54 2.83
1903 3390 8.621286 CCCTATTGTGCGAGTTATTTTATTCTT 58.379 33.333 0.00 0.00 0.00 2.52
1939 3426 6.206438 TGCAAACTCTTTGTATACAATCAGCA 59.794 34.615 18.69 16.88 42.56 4.41
1988 3475 7.939784 AAAATCTTAAGAGTCGGCCTTATTT 57.060 32.000 11.53 0.00 0.00 1.40
2080 3582 4.685575 ATCTGTTGGAGATGCTCTTAAGCC 60.686 45.833 0.00 0.00 40.19 4.35
2258 3762 2.109799 CGCCATCGGATCTGCCTT 59.890 61.111 0.00 0.00 0.00 4.35
2296 3800 3.075005 GCTGTCCCCGAGCTACCA 61.075 66.667 0.00 0.00 33.37 3.25
2318 3822 4.738998 CGCCATCCCCAAGCACCA 62.739 66.667 0.00 0.00 0.00 4.17
2376 3880 2.123251 ATCGGATCTGACCCCGCT 60.123 61.111 6.33 3.73 44.96 5.52
2479 3993 1.935400 ACCCCCATCTCCATGCCAA 60.935 57.895 0.00 0.00 0.00 4.52
2529 4043 2.833227 CGAGAACCCAACCACCCA 59.167 61.111 0.00 0.00 0.00 4.51
2569 4083 3.134458 CAAGTATAAGCTGCTGCCCTAC 58.866 50.000 12.44 10.99 40.80 3.18
2804 4322 6.418101 ACAAATAGGTTATGACATCAGCTGT 58.582 36.000 14.67 2.44 42.15 4.40
2877 4395 6.430925 CCACACGATGAATGGGTGATAAATAT 59.569 38.462 0.00 0.00 35.68 1.28
2976 4494 6.801718 TTACCCTTAGCAGCTAGTTCAATA 57.198 37.500 1.49 0.00 0.00 1.90
3009 4527 7.285401 GGGTATAATGGATGTGAAGTTGTGAAT 59.715 37.037 0.00 0.00 0.00 2.57
3058 4576 7.929941 TCATTGCACCACATACAATAAGTTA 57.070 32.000 0.00 0.00 32.89 2.24
3072 4590 2.937519 TGTTGGTAGTTCATTGCACCA 58.062 42.857 0.00 0.00 39.27 4.17
3116 4637 1.439543 AACCACAGGAGCCTCTTTCT 58.560 50.000 0.00 0.00 0.00 2.52
3169 4690 1.950909 CCGGTTGGAAAAGTAAGTGCA 59.049 47.619 0.00 0.00 37.49 4.57
3259 4780 6.014840 AGCAGAAACATCACAAGGATCAAAAT 60.015 34.615 0.00 0.00 32.57 1.82
3300 4821 7.166970 GCTAATTCATCACATAGTTGCAACATG 59.833 37.037 30.11 27.93 0.00 3.21
3491 5019 3.757947 TCTCTTGACATCCTCCACCTA 57.242 47.619 0.00 0.00 0.00 3.08
3518 5046 5.772825 TTCAGTGCTTCATAGTGCTTTTT 57.227 34.783 0.00 0.00 0.00 1.94
3546 5074 2.783135 TGTTTTCCAGTGCTGAGATCC 58.217 47.619 0.02 0.00 0.00 3.36
3616 5144 7.030165 CAGTTGTTTAACCATTGTACACAACA 58.970 34.615 17.27 7.21 39.22 3.33
3656 5184 4.940654 TGCAGTAATACTTATGCAGCAACA 59.059 37.500 0.00 0.00 43.34 3.33
3667 5195 8.511604 ACAGCTTAAATGATGCAGTAATACTT 57.488 30.769 0.00 0.00 0.00 2.24
3668 5196 9.046296 GTACAGCTTAAATGATGCAGTAATACT 57.954 33.333 0.00 0.00 33.72 2.12
3698 5229 8.316214 AGGATTCATAGCAATTTGAACAACAAT 58.684 29.630 0.00 0.00 38.36 2.71
3753 5284 8.697507 AATTGTTTCTTATTGGTCTCTGTCTT 57.302 30.769 0.00 0.00 0.00 3.01
3754 5285 8.697507 AAATTGTTTCTTATTGGTCTCTGTCT 57.302 30.769 0.00 0.00 0.00 3.41
3792 5323 6.491714 AACATAACAGTGAGATAGGCTGAT 57.508 37.500 0.00 0.00 34.60 2.90
3818 5349 7.233757 AGGTCCATTACATACTCTAACAGATCC 59.766 40.741 0.00 0.00 0.00 3.36
3826 5357 6.212791 GGCCATTAGGTCCATTACATACTCTA 59.787 42.308 0.00 0.00 37.19 2.43
3827 5358 5.013183 GGCCATTAGGTCCATTACATACTCT 59.987 44.000 0.00 0.00 37.19 3.24
3828 5359 5.013183 AGGCCATTAGGTCCATTACATACTC 59.987 44.000 5.01 0.00 41.85 2.59
3829 5360 4.913968 AGGCCATTAGGTCCATTACATACT 59.086 41.667 5.01 0.00 41.85 2.12
3830 5361 5.003804 CAGGCCATTAGGTCCATTACATAC 58.996 45.833 5.01 0.00 41.85 2.39
3831 5362 4.506625 GCAGGCCATTAGGTCCATTACATA 60.507 45.833 5.01 0.00 41.85 2.29
3832 5363 3.751893 GCAGGCCATTAGGTCCATTACAT 60.752 47.826 5.01 0.00 41.85 2.29
3833 5364 2.422803 GCAGGCCATTAGGTCCATTACA 60.423 50.000 5.01 0.00 41.85 2.41
3834 5365 2.230660 GCAGGCCATTAGGTCCATTAC 58.769 52.381 5.01 0.00 41.85 1.89
3835 5366 1.202758 CGCAGGCCATTAGGTCCATTA 60.203 52.381 5.01 0.00 41.85 1.90
3836 5367 0.466189 CGCAGGCCATTAGGTCCATT 60.466 55.000 5.01 0.00 41.85 3.16
3837 5368 1.149174 CGCAGGCCATTAGGTCCAT 59.851 57.895 5.01 0.00 41.85 3.41
3838 5369 2.589540 CGCAGGCCATTAGGTCCA 59.410 61.111 5.01 0.00 41.85 4.02
3839 5370 2.902343 GCGCAGGCCATTAGGTCC 60.902 66.667 5.01 0.00 41.85 4.46
3840 5371 2.182842 CAGCGCAGGCCATTAGGTC 61.183 63.158 11.47 0.00 41.24 3.85
3841 5372 2.124570 CAGCGCAGGCCATTAGGT 60.125 61.111 11.47 0.00 41.24 3.08
3842 5373 2.903855 CCAGCGCAGGCCATTAGG 60.904 66.667 11.47 0.00 41.24 2.69
3850 5381 2.356313 CTATACCGCCAGCGCAGG 60.356 66.667 15.57 15.57 38.24 4.85
3851 5382 1.661821 GACTATACCGCCAGCGCAG 60.662 63.158 11.47 0.00 38.24 5.18
3852 5383 2.415843 GACTATACCGCCAGCGCA 59.584 61.111 11.47 0.00 38.24 6.09
3853 5384 2.355956 GGACTATACCGCCAGCGC 60.356 66.667 6.50 0.00 38.24 5.92
3854 5385 2.050351 CGGACTATACCGCCAGCG 60.050 66.667 4.75 4.75 46.20 5.18
3867 5398 4.933505 ATTAACCCTAAGTCTAGCGGAC 57.066 45.455 5.00 5.00 44.80 4.79
3868 5399 6.040166 CACTAATTAACCCTAAGTCTAGCGGA 59.960 42.308 0.00 0.00 0.00 5.54
3869 5400 6.040166 TCACTAATTAACCCTAAGTCTAGCGG 59.960 42.308 0.00 0.00 0.00 5.52
3870 5401 7.035840 TCACTAATTAACCCTAAGTCTAGCG 57.964 40.000 0.00 0.00 0.00 4.26
3877 5408 9.257651 CGACCTTTATCACTAATTAACCCTAAG 57.742 37.037 0.00 0.00 0.00 2.18
3878 5409 7.712205 GCGACCTTTATCACTAATTAACCCTAA 59.288 37.037 0.00 0.00 0.00 2.69
3879 5410 7.070322 AGCGACCTTTATCACTAATTAACCCTA 59.930 37.037 0.00 0.00 0.00 3.53
3880 5411 6.053650 GCGACCTTTATCACTAATTAACCCT 58.946 40.000 0.00 0.00 0.00 4.34
3881 5412 6.053650 AGCGACCTTTATCACTAATTAACCC 58.946 40.000 0.00 0.00 0.00 4.11
3882 5413 7.549615 AAGCGACCTTTATCACTAATTAACC 57.450 36.000 0.00 0.00 0.00 2.85
3883 5414 8.546244 GGTAAGCGACCTTTATCACTAATTAAC 58.454 37.037 3.74 0.00 45.89 2.01
3884 5415 8.652810 GGTAAGCGACCTTTATCACTAATTAA 57.347 34.615 3.74 0.00 45.89 1.40
3917 5448 7.547227 AGCAAGCGACCTTTATCATTATTTTT 58.453 30.769 0.00 0.00 0.00 1.94
3918 5449 7.100458 AGCAAGCGACCTTTATCATTATTTT 57.900 32.000 0.00 0.00 0.00 1.82
3919 5450 6.699575 AGCAAGCGACCTTTATCATTATTT 57.300 33.333 0.00 0.00 0.00 1.40
3920 5451 6.699575 AAGCAAGCGACCTTTATCATTATT 57.300 33.333 0.00 0.00 0.00 1.40
3921 5452 6.428159 CCTAAGCAAGCGACCTTTATCATTAT 59.572 38.462 0.00 0.00 0.00 1.28
3925 5456 3.531538 CCTAAGCAAGCGACCTTTATCA 58.468 45.455 0.00 0.00 0.00 2.15
3931 5462 0.036294 GAACCCTAAGCAAGCGACCT 60.036 55.000 0.00 0.00 0.00 3.85
3948 5479 7.287061 TGAGTCCCAAGAAATTCTTACTTGAA 58.713 34.615 8.03 0.00 42.12 2.69
4040 5573 0.551131 ACCAGGCAAGAGGGAAGGAT 60.551 55.000 0.00 0.00 0.00 3.24
4106 5640 7.469043 GCTGATACCAAATTGTTATGATGCTGA 60.469 37.037 0.00 0.00 0.00 4.26
4112 5646 7.282585 AGCTAGCTGATACCAAATTGTTATGA 58.717 34.615 18.57 0.00 0.00 2.15
4160 5694 0.391263 GAAGAGACGGTTTGGGCGAT 60.391 55.000 0.00 0.00 0.00 4.58
4161 5695 1.005394 GAAGAGACGGTTTGGGCGA 60.005 57.895 0.00 0.00 0.00 5.54
4169 5703 4.070552 GGCAGCGGAAGAGACGGT 62.071 66.667 0.00 0.00 43.47 4.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.