Multiple sequence alignment - TraesCS3B01G241600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G241600 chr3B 100.000 5561 0 0 1 5561 380896393 380890833 0.000000e+00 10270.0
1 TraesCS3B01G241600 chr3D 91.654 2684 106 46 2916 5530 288111721 288109087 0.000000e+00 3607.0
2 TraesCS3B01G241600 chr3D 88.518 1167 31 33 1776 2909 288112890 288111794 0.000000e+00 1317.0
3 TraesCS3B01G241600 chr3D 86.303 1044 45 26 589 1564 288114023 288113010 0.000000e+00 1046.0
4 TraesCS3B01G241600 chr3D 97.917 144 1 2 450 591 288119300 288119157 1.200000e-61 248.0
5 TraesCS3B01G241600 chr3D 94.253 87 1 1 1619 1705 288112992 288112910 4.520000e-26 130.0
6 TraesCS3B01G241600 chr3A 89.460 2742 119 64 2916 5560 377801169 377798501 0.000000e+00 3306.0
7 TraesCS3B01G241600 chr3A 87.255 1122 50 41 1776 2845 377802383 377801303 0.000000e+00 1194.0
8 TraesCS3B01G241600 chr3A 83.333 1278 59 48 567 1759 377803574 377802366 0.000000e+00 1038.0
9 TraesCS3B01G241600 chr3A 88.800 125 5 6 450 571 377803937 377803819 1.610000e-30 145.0
10 TraesCS3B01G241600 chr6B 99.335 451 3 0 1 451 680537897 680537447 0.000000e+00 817.0
11 TraesCS3B01G241600 chr1B 93.696 460 20 4 1 458 108842474 108842022 0.000000e+00 680.0
12 TraesCS3B01G241600 chr1B 89.815 108 9 2 1070 1177 679567481 679567586 2.700000e-28 137.0
13 TraesCS3B01G241600 chr1B 87.736 106 13 0 3151 3256 679569826 679569931 2.100000e-24 124.0
14 TraesCS3B01G241600 chr1A 89.095 431 39 4 26 454 587590326 587589902 3.820000e-146 529.0
15 TraesCS3B01G241600 chr1A 93.069 101 6 1 1077 1177 586283229 586283328 4.490000e-31 147.0
16 TraesCS3B01G241600 chr5B 87.153 288 35 2 168 454 65718813 65719099 5.370000e-85 326.0
17 TraesCS3B01G241600 chr1D 89.815 108 9 2 1070 1177 487807911 487808016 2.700000e-28 137.0
18 TraesCS3B01G241600 chr4B 85.246 122 18 0 333 454 188199440 188199319 5.850000e-25 126.0
19 TraesCS3B01G241600 chr7D 83.471 121 19 1 333 452 568909792 568909912 1.640000e-20 111.0
20 TraesCS3B01G241600 chr7D 89.024 82 8 1 1073 1154 506817354 506817274 3.540000e-17 100.0
21 TraesCS3B01G241600 chr4D 91.026 78 6 1 1077 1154 228529773 228529697 2.740000e-18 104.0
22 TraesCS3B01G241600 chr7A 78.344 157 28 5 259 413 575926753 575926601 4.590000e-16 97.1
23 TraesCS3B01G241600 chr7A 92.308 65 4 1 1088 1152 639586445 639586382 2.130000e-14 91.6
24 TraesCS3B01G241600 chr5D 95.455 44 2 0 1135 1178 435933403 435933446 2.780000e-08 71.3
25 TraesCS3B01G241600 chr5A 93.182 44 3 0 1135 1178 549953324 549953367 1.290000e-06 65.8
26 TraesCS3B01G241600 chr6D 100.000 28 0 0 5198 5225 462423527 462423500 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G241600 chr3B 380890833 380896393 5560 True 10270.00 10270 100.000 1 5561 1 chr3B.!!$R1 5560
1 TraesCS3B01G241600 chr3D 288109087 288114023 4936 True 1525.00 3607 90.182 589 5530 4 chr3D.!!$R2 4941
2 TraesCS3B01G241600 chr3A 377798501 377803937 5436 True 1420.75 3306 87.212 450 5560 4 chr3A.!!$R1 5110

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.033504 AGACGTGCTTGGTGTAGTGG 59.966 55.0 0.00 0.0 0.00 4.00 F
1470 1833 0.035317 TATCTGCATGGATCACGCCC 59.965 55.0 0.00 0.0 0.00 6.13 F
2060 2467 0.036388 CTCCCTGCGCCTTCTTTGTA 60.036 55.0 4.18 0.0 0.00 2.41 F
2061 2468 0.036388 TCCCTGCGCCTTCTTTGTAG 60.036 55.0 4.18 0.0 0.00 2.74 F
2239 2652 0.099968 CTGCATGCTCCAAATGGACG 59.900 55.0 20.33 0.0 39.78 4.79 F
3178 3735 0.322008 GAGAGCCTGTTGGGGAAGTG 60.322 60.0 0.00 0.0 35.12 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2043 2450 0.321653 ACTACAAAGAAGGCGCAGGG 60.322 55.0 10.83 0.0 0.00 4.45 R
3080 3637 0.039256 TGCGCATTTCAGCTTCCAAC 60.039 50.0 5.66 0.0 0.00 3.77 R
3670 4230 0.458669 GCTTCCAGCCAATCACATGG 59.541 55.0 0.00 0.0 43.70 3.66 R
3671 4231 1.471119 AGCTTCCAGCCAATCACATG 58.529 50.0 0.00 0.0 43.77 3.21 R
4230 4832 2.465860 TGTAGAACCCATCCACGTTG 57.534 50.0 0.00 0.0 0.00 4.10 R
4571 5173 0.250338 AGTCCAGAAACGCTTCCACC 60.250 55.0 0.00 0.0 31.28 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 9.797556 AAGTTAATTCTTTTTAAAGACGTGCTT 57.202 25.926 4.48 0.00 44.18 3.91
53 54 9.233232 AGTTAATTCTTTTTAAAGACGTGCTTG 57.767 29.630 4.48 0.00 44.18 4.01
54 55 8.476925 GTTAATTCTTTTTAAAGACGTGCTTGG 58.523 33.333 4.48 0.00 44.18 3.61
55 56 5.570234 TTCTTTTTAAAGACGTGCTTGGT 57.430 34.783 4.48 0.00 44.18 3.67
56 57 4.915704 TCTTTTTAAAGACGTGCTTGGTG 58.084 39.130 0.00 0.00 39.95 4.17
57 58 4.396790 TCTTTTTAAAGACGTGCTTGGTGT 59.603 37.500 0.00 0.00 39.95 4.16
58 59 5.585445 TCTTTTTAAAGACGTGCTTGGTGTA 59.415 36.000 0.00 0.00 39.95 2.90
59 60 5.412526 TTTTAAAGACGTGCTTGGTGTAG 57.587 39.130 0.00 0.00 36.80 2.74
60 61 2.614829 AAAGACGTGCTTGGTGTAGT 57.385 45.000 0.00 0.00 36.80 2.73
61 62 1.865865 AAGACGTGCTTGGTGTAGTG 58.134 50.000 0.00 0.00 34.93 2.74
62 63 0.033504 AGACGTGCTTGGTGTAGTGG 59.966 55.000 0.00 0.00 0.00 4.00
63 64 0.249741 GACGTGCTTGGTGTAGTGGT 60.250 55.000 0.00 0.00 0.00 4.16
64 65 0.179468 ACGTGCTTGGTGTAGTGGTT 59.821 50.000 0.00 0.00 0.00 3.67
65 66 0.586319 CGTGCTTGGTGTAGTGGTTG 59.414 55.000 0.00 0.00 0.00 3.77
66 67 0.951558 GTGCTTGGTGTAGTGGTTGG 59.048 55.000 0.00 0.00 0.00 3.77
67 68 0.821711 TGCTTGGTGTAGTGGTTGGC 60.822 55.000 0.00 0.00 0.00 4.52
68 69 0.821711 GCTTGGTGTAGTGGTTGGCA 60.822 55.000 0.00 0.00 0.00 4.92
69 70 0.951558 CTTGGTGTAGTGGTTGGCAC 59.048 55.000 0.00 0.00 0.00 5.01
70 71 0.256177 TTGGTGTAGTGGTTGGCACA 59.744 50.000 0.00 0.00 33.88 4.57
71 72 0.179032 TGGTGTAGTGGTTGGCACAG 60.179 55.000 0.00 0.00 42.39 3.66
72 73 0.889186 GGTGTAGTGGTTGGCACAGG 60.889 60.000 0.00 0.00 42.39 4.00
73 74 1.228124 TGTAGTGGTTGGCACAGGC 60.228 57.895 0.00 0.00 42.39 4.85
86 87 3.294750 CAGGCCATGTGCTTGCAT 58.705 55.556 5.01 0.00 40.45 3.96
87 88 1.153647 CAGGCCATGTGCTTGCATG 60.154 57.895 5.01 8.73 40.45 4.06
92 93 2.971997 CATGTGCTTGCATGGCATC 58.028 52.632 16.01 11.07 41.70 3.91
93 94 0.869880 CATGTGCTTGCATGGCATCG 60.870 55.000 16.01 6.23 41.70 3.84
94 95 2.581409 GTGCTTGCATGGCATCGC 60.581 61.111 16.01 12.90 41.86 4.58
95 96 4.182315 TGCTTGCATGGCATCGCG 62.182 61.111 0.00 0.00 38.76 5.87
96 97 3.879682 GCTTGCATGGCATCGCGA 61.880 61.111 13.09 13.09 38.76 5.87
97 98 2.326897 CTTGCATGGCATCGCGAG 59.673 61.111 16.66 18.37 38.76 5.03
98 99 2.436469 TTGCATGGCATCGCGAGT 60.436 55.556 16.66 0.00 38.76 4.18
99 100 1.985447 CTTGCATGGCATCGCGAGTT 61.985 55.000 16.66 0.00 38.76 3.01
100 101 1.980951 TTGCATGGCATCGCGAGTTC 61.981 55.000 16.66 6.69 38.76 3.01
101 102 2.622629 CATGGCATCGCGAGTTCG 59.377 61.111 16.66 3.97 43.27 3.95
102 103 1.878069 CATGGCATCGCGAGTTCGA 60.878 57.895 16.66 3.49 43.02 3.71
103 104 1.589993 ATGGCATCGCGAGTTCGAG 60.590 57.895 16.66 1.94 42.14 4.04
104 105 3.621394 GGCATCGCGAGTTCGAGC 61.621 66.667 16.66 11.07 42.14 5.03
105 106 3.621394 GCATCGCGAGTTCGAGCC 61.621 66.667 16.66 0.00 42.14 4.70
106 107 2.956964 CATCGCGAGTTCGAGCCC 60.957 66.667 16.66 0.00 42.14 5.19
107 108 4.208686 ATCGCGAGTTCGAGCCCC 62.209 66.667 16.66 0.00 42.14 5.80
109 110 4.735132 CGCGAGTTCGAGCCCCAA 62.735 66.667 0.00 0.00 43.02 4.12
110 111 2.815647 GCGAGTTCGAGCCCCAAG 60.816 66.667 5.60 0.00 43.02 3.61
111 112 2.815647 CGAGTTCGAGCCCCAAGC 60.816 66.667 0.00 0.00 43.02 4.01
120 121 3.071575 GCCCCAAGCTGCCATTTT 58.928 55.556 0.00 0.00 38.99 1.82
121 122 1.376295 GCCCCAAGCTGCCATTTTG 60.376 57.895 0.00 0.00 38.99 2.44
122 123 2.060370 CCCCAAGCTGCCATTTTGT 58.940 52.632 0.00 0.00 0.00 2.83
123 124 0.397564 CCCCAAGCTGCCATTTTGTT 59.602 50.000 0.00 0.00 0.00 2.83
124 125 1.202794 CCCCAAGCTGCCATTTTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
125 126 2.145536 CCCAAGCTGCCATTTTGTTTC 58.854 47.619 0.00 0.00 0.00 2.78
126 127 2.224354 CCCAAGCTGCCATTTTGTTTCT 60.224 45.455 0.00 0.00 0.00 2.52
127 128 3.062042 CCAAGCTGCCATTTTGTTTCTC 58.938 45.455 0.00 0.00 0.00 2.87
128 129 3.493002 CCAAGCTGCCATTTTGTTTCTCA 60.493 43.478 0.00 0.00 0.00 3.27
129 130 4.121317 CAAGCTGCCATTTTGTTTCTCAA 58.879 39.130 0.00 0.00 0.00 3.02
130 131 4.612264 AGCTGCCATTTTGTTTCTCAAT 57.388 36.364 0.00 0.00 35.84 2.57
131 132 4.964593 AGCTGCCATTTTGTTTCTCAATT 58.035 34.783 0.00 0.00 35.84 2.32
132 133 4.992951 AGCTGCCATTTTGTTTCTCAATTC 59.007 37.500 0.00 0.00 35.84 2.17
133 134 4.992951 GCTGCCATTTTGTTTCTCAATTCT 59.007 37.500 0.00 0.00 35.84 2.40
134 135 6.015180 AGCTGCCATTTTGTTTCTCAATTCTA 60.015 34.615 0.00 0.00 35.84 2.10
135 136 6.815142 GCTGCCATTTTGTTTCTCAATTCTAT 59.185 34.615 0.00 0.00 35.84 1.98
136 137 7.201496 GCTGCCATTTTGTTTCTCAATTCTATG 60.201 37.037 0.00 0.00 35.84 2.23
137 138 7.669427 TGCCATTTTGTTTCTCAATTCTATGT 58.331 30.769 0.00 0.00 35.84 2.29
138 139 7.814107 TGCCATTTTGTTTCTCAATTCTATGTC 59.186 33.333 0.00 0.00 35.84 3.06
139 140 7.814107 GCCATTTTGTTTCTCAATTCTATGTCA 59.186 33.333 0.00 0.00 35.84 3.58
140 141 9.695526 CCATTTTGTTTCTCAATTCTATGTCAA 57.304 29.630 0.00 0.00 35.84 3.18
142 143 8.801715 TTTTGTTTCTCAATTCTATGTCAAGC 57.198 30.769 0.00 0.00 35.84 4.01
143 144 6.169419 TGTTTCTCAATTCTATGTCAAGCG 57.831 37.500 0.00 0.00 0.00 4.68
144 145 5.700832 TGTTTCTCAATTCTATGTCAAGCGT 59.299 36.000 0.00 0.00 0.00 5.07
145 146 5.784750 TTCTCAATTCTATGTCAAGCGTG 57.215 39.130 0.00 0.00 0.00 5.34
146 147 5.072040 TCTCAATTCTATGTCAAGCGTGA 57.928 39.130 0.00 0.00 0.00 4.35
153 154 2.245532 GTCAAGCGTGACGTGCAC 59.754 61.111 16.95 6.82 44.58 4.57
169 170 3.006659 TGCACGGCACATTTTTAGTTC 57.993 42.857 0.00 0.00 31.71 3.01
170 171 2.621055 TGCACGGCACATTTTTAGTTCT 59.379 40.909 0.00 0.00 31.71 3.01
171 172 3.234386 GCACGGCACATTTTTAGTTCTC 58.766 45.455 0.00 0.00 0.00 2.87
172 173 3.304391 GCACGGCACATTTTTAGTTCTCA 60.304 43.478 0.00 0.00 0.00 3.27
173 174 4.615912 GCACGGCACATTTTTAGTTCTCAT 60.616 41.667 0.00 0.00 0.00 2.90
174 175 5.460646 CACGGCACATTTTTAGTTCTCATT 58.539 37.500 0.00 0.00 0.00 2.57
175 176 5.920273 CACGGCACATTTTTAGTTCTCATTT 59.080 36.000 0.00 0.00 0.00 2.32
176 177 6.088085 CACGGCACATTTTTAGTTCTCATTTC 59.912 38.462 0.00 0.00 0.00 2.17
177 178 6.148948 CGGCACATTTTTAGTTCTCATTTCA 58.851 36.000 0.00 0.00 0.00 2.69
178 179 6.088085 CGGCACATTTTTAGTTCTCATTTCAC 59.912 38.462 0.00 0.00 0.00 3.18
179 180 7.147976 GGCACATTTTTAGTTCTCATTTCACT 58.852 34.615 0.00 0.00 0.00 3.41
180 181 7.115378 GGCACATTTTTAGTTCTCATTTCACTG 59.885 37.037 0.00 0.00 0.00 3.66
181 182 7.649306 GCACATTTTTAGTTCTCATTTCACTGT 59.351 33.333 0.00 0.00 0.00 3.55
182 183 9.173939 CACATTTTTAGTTCTCATTTCACTGTC 57.826 33.333 0.00 0.00 0.00 3.51
183 184 8.902806 ACATTTTTAGTTCTCATTTCACTGTCA 58.097 29.630 0.00 0.00 0.00 3.58
184 185 9.734620 CATTTTTAGTTCTCATTTCACTGTCAA 57.265 29.630 0.00 0.00 0.00 3.18
185 186 9.956720 ATTTTTAGTTCTCATTTCACTGTCAAG 57.043 29.630 0.00 0.00 0.00 3.02
186 187 6.545504 TTAGTTCTCATTTCACTGTCAAGC 57.454 37.500 0.00 0.00 0.00 4.01
187 188 4.454678 AGTTCTCATTTCACTGTCAAGCA 58.545 39.130 0.00 0.00 0.00 3.91
195 196 4.386413 CTGTCAAGCAGGACCCAC 57.614 61.111 5.46 0.00 41.42 4.61
196 197 1.451504 CTGTCAAGCAGGACCCACA 59.548 57.895 5.46 0.00 41.42 4.17
197 198 0.037303 CTGTCAAGCAGGACCCACAT 59.963 55.000 5.46 0.00 41.42 3.21
198 199 0.250858 TGTCAAGCAGGACCCACATG 60.251 55.000 5.46 0.00 36.97 3.21
199 200 0.250901 GTCAAGCAGGACCCACATGT 60.251 55.000 0.00 0.00 32.48 3.21
200 201 0.250858 TCAAGCAGGACCCACATGTG 60.251 55.000 19.31 19.31 32.48 3.21
201 202 1.604593 AAGCAGGACCCACATGTGC 60.605 57.895 20.81 7.22 32.48 4.57
202 203 2.034687 GCAGGACCCACATGTGCT 59.965 61.111 20.81 9.05 37.40 4.40
203 204 3.991999 CAGGACCCACATGTGCTG 58.008 61.111 20.81 17.01 46.06 4.41
204 205 3.905454 AGGACCCACATGTGCTGA 58.095 55.556 20.81 0.00 35.41 4.26
205 206 2.391226 AGGACCCACATGTGCTGAT 58.609 52.632 20.81 4.74 35.41 2.90
206 207 1.583556 AGGACCCACATGTGCTGATA 58.416 50.000 20.81 0.00 35.41 2.15
207 208 1.915489 AGGACCCACATGTGCTGATAA 59.085 47.619 20.81 0.00 35.41 1.75
208 209 2.092753 AGGACCCACATGTGCTGATAAG 60.093 50.000 20.81 4.71 35.41 1.73
209 210 2.292267 GACCCACATGTGCTGATAAGG 58.708 52.381 20.81 15.77 0.00 2.69
210 211 1.064463 ACCCACATGTGCTGATAAGGG 60.064 52.381 20.81 15.44 40.88 3.95
211 212 1.683943 CCACATGTGCTGATAAGGGG 58.316 55.000 20.81 0.00 0.00 4.79
212 213 1.683943 CACATGTGCTGATAAGGGGG 58.316 55.000 13.94 0.00 0.00 5.40
213 214 0.106519 ACATGTGCTGATAAGGGGGC 60.107 55.000 0.00 0.00 0.00 5.80
214 215 0.184451 CATGTGCTGATAAGGGGGCT 59.816 55.000 0.00 0.00 0.00 5.19
215 216 0.929244 ATGTGCTGATAAGGGGGCTT 59.071 50.000 0.00 0.00 0.00 4.35
216 217 0.255890 TGTGCTGATAAGGGGGCTTC 59.744 55.000 0.00 0.00 0.00 3.86
217 218 0.548510 GTGCTGATAAGGGGGCTTCT 59.451 55.000 0.00 0.00 0.00 2.85
218 219 0.548031 TGCTGATAAGGGGGCTTCTG 59.452 55.000 0.00 0.00 0.00 3.02
219 220 0.548510 GCTGATAAGGGGGCTTCTGT 59.451 55.000 0.00 0.00 0.00 3.41
220 221 1.748591 GCTGATAAGGGGGCTTCTGTG 60.749 57.143 0.00 0.00 0.00 3.66
221 222 0.255890 TGATAAGGGGGCTTCTGTGC 59.744 55.000 0.00 0.00 0.00 4.57
222 223 0.255890 GATAAGGGGGCTTCTGTGCA 59.744 55.000 0.00 0.00 34.04 4.57
223 224 0.704076 ATAAGGGGGCTTCTGTGCAA 59.296 50.000 0.00 0.00 34.04 4.08
224 225 0.704076 TAAGGGGGCTTCTGTGCAAT 59.296 50.000 0.00 0.00 34.04 3.56
225 226 0.178924 AAGGGGGCTTCTGTGCAATT 60.179 50.000 0.00 0.00 34.04 2.32
226 227 0.704076 AGGGGGCTTCTGTGCAATTA 59.296 50.000 0.00 0.00 34.04 1.40
227 228 1.077005 AGGGGGCTTCTGTGCAATTAA 59.923 47.619 0.00 0.00 34.04 1.40
228 229 1.899142 GGGGGCTTCTGTGCAATTAAA 59.101 47.619 0.00 0.00 34.04 1.52
229 230 2.501316 GGGGGCTTCTGTGCAATTAAAT 59.499 45.455 0.00 0.00 34.04 1.40
230 231 3.704061 GGGGGCTTCTGTGCAATTAAATA 59.296 43.478 0.00 0.00 34.04 1.40
231 232 4.441495 GGGGGCTTCTGTGCAATTAAATAC 60.441 45.833 0.00 0.00 34.04 1.89
232 233 4.159506 GGGGCTTCTGTGCAATTAAATACA 59.840 41.667 0.00 0.00 34.04 2.29
233 234 5.337169 GGGGCTTCTGTGCAATTAAATACAA 60.337 40.000 0.00 0.00 34.04 2.41
234 235 6.162777 GGGCTTCTGTGCAATTAAATACAAA 58.837 36.000 0.00 0.00 34.04 2.83
235 236 6.090763 GGGCTTCTGTGCAATTAAATACAAAC 59.909 38.462 0.00 0.00 34.04 2.93
236 237 6.183359 GGCTTCTGTGCAATTAAATACAAACG 60.183 38.462 0.00 0.00 34.04 3.60
237 238 6.362283 GCTTCTGTGCAATTAAATACAAACGT 59.638 34.615 0.00 0.00 0.00 3.99
238 239 7.616103 TTCTGTGCAATTAAATACAAACGTG 57.384 32.000 0.00 0.00 0.00 4.49
239 240 6.146216 TCTGTGCAATTAAATACAAACGTGG 58.854 36.000 0.00 0.00 0.00 4.94
240 241 5.223382 TGTGCAATTAAATACAAACGTGGG 58.777 37.500 0.00 0.00 0.00 4.61
241 242 4.623595 GTGCAATTAAATACAAACGTGGGG 59.376 41.667 0.00 0.00 0.00 4.96
242 243 4.281182 TGCAATTAAATACAAACGTGGGGT 59.719 37.500 0.00 0.00 0.00 4.95
243 244 4.623595 GCAATTAAATACAAACGTGGGGTG 59.376 41.667 0.00 0.00 0.00 4.61
244 245 5.774630 CAATTAAATACAAACGTGGGGTGT 58.225 37.500 0.00 0.00 0.00 4.16
245 246 6.217294 CAATTAAATACAAACGTGGGGTGTT 58.783 36.000 0.00 0.00 0.00 3.32
246 247 5.848833 TTAAATACAAACGTGGGGTGTTT 57.151 34.783 11.75 11.75 40.01 2.83
247 248 3.994204 AATACAAACGTGGGGTGTTTC 57.006 42.857 0.00 0.00 37.44 2.78
248 249 2.713863 TACAAACGTGGGGTGTTTCT 57.286 45.000 0.00 0.00 37.44 2.52
249 250 1.099689 ACAAACGTGGGGTGTTTCTG 58.900 50.000 0.00 0.00 37.44 3.02
250 251 0.248866 CAAACGTGGGGTGTTTCTGC 60.249 55.000 0.00 0.00 37.44 4.26
251 252 0.681564 AAACGTGGGGTGTTTCTGCA 60.682 50.000 0.00 0.00 34.60 4.41
252 253 1.381165 AACGTGGGGTGTTTCTGCAC 61.381 55.000 0.00 0.00 38.56 4.57
253 254 1.821759 CGTGGGGTGTTTCTGCACA 60.822 57.895 0.00 0.00 40.89 4.57
254 255 1.380403 CGTGGGGTGTTTCTGCACAA 61.380 55.000 0.00 0.00 40.89 3.33
255 256 0.820871 GTGGGGTGTTTCTGCACAAA 59.179 50.000 0.00 0.00 40.89 2.83
256 257 1.412343 GTGGGGTGTTTCTGCACAAAT 59.588 47.619 0.00 0.00 40.89 2.32
257 258 1.411977 TGGGGTGTTTCTGCACAAATG 59.588 47.619 0.00 0.00 40.89 2.32
258 259 1.270252 GGGGTGTTTCTGCACAAATGG 60.270 52.381 0.00 0.00 40.89 3.16
259 260 1.412343 GGGTGTTTCTGCACAAATGGT 59.588 47.619 0.00 0.00 40.89 3.55
260 261 2.158971 GGGTGTTTCTGCACAAATGGTT 60.159 45.455 0.00 0.00 40.89 3.67
261 262 3.123050 GGTGTTTCTGCACAAATGGTTC 58.877 45.455 0.00 0.00 40.89 3.62
262 263 3.123050 GTGTTTCTGCACAAATGGTTCC 58.877 45.455 0.00 0.00 39.07 3.62
263 264 2.223688 TGTTTCTGCACAAATGGTTCCG 60.224 45.455 0.00 0.00 0.00 4.30
264 265 0.958091 TTCTGCACAAATGGTTCCGG 59.042 50.000 0.00 0.00 0.00 5.14
265 266 0.179004 TCTGCACAAATGGTTCCGGT 60.179 50.000 0.00 0.00 0.00 5.28
266 267 0.240945 CTGCACAAATGGTTCCGGTC 59.759 55.000 0.00 0.00 0.00 4.79
267 268 0.466372 TGCACAAATGGTTCCGGTCA 60.466 50.000 0.00 0.00 0.00 4.02
268 269 0.671251 GCACAAATGGTTCCGGTCAA 59.329 50.000 0.00 0.00 0.00 3.18
269 270 1.272212 GCACAAATGGTTCCGGTCAAT 59.728 47.619 0.00 0.00 0.00 2.57
270 271 2.926159 GCACAAATGGTTCCGGTCAATG 60.926 50.000 0.00 5.74 0.00 2.82
271 272 2.556189 CACAAATGGTTCCGGTCAATGA 59.444 45.455 0.00 0.00 0.00 2.57
272 273 2.556622 ACAAATGGTTCCGGTCAATGAC 59.443 45.455 4.51 4.51 0.00 3.06
273 274 2.556189 CAAATGGTTCCGGTCAATGACA 59.444 45.455 15.86 0.00 33.68 3.58
274 275 2.113860 ATGGTTCCGGTCAATGACAG 57.886 50.000 15.86 11.17 33.68 3.51
275 276 0.762418 TGGTTCCGGTCAATGACAGT 59.238 50.000 15.86 0.00 33.68 3.55
276 277 1.156736 GGTTCCGGTCAATGACAGTG 58.843 55.000 15.86 5.80 33.68 3.66
277 278 1.156736 GTTCCGGTCAATGACAGTGG 58.843 55.000 15.86 13.05 33.68 4.00
278 279 1.052617 TTCCGGTCAATGACAGTGGA 58.947 50.000 15.86 15.06 33.68 4.02
279 280 0.320374 TCCGGTCAATGACAGTGGAC 59.680 55.000 15.86 0.55 33.68 4.02
280 281 0.673644 CCGGTCAATGACAGTGGACC 60.674 60.000 15.86 8.42 44.97 4.46
285 286 2.939103 GTCAATGACAGTGGACCATAGC 59.061 50.000 8.74 0.00 32.09 2.97
286 287 2.092968 TCAATGACAGTGGACCATAGCC 60.093 50.000 2.62 0.00 0.00 3.93
287 288 1.583556 ATGACAGTGGACCATAGCCA 58.416 50.000 0.00 0.00 0.00 4.75
288 289 1.583556 TGACAGTGGACCATAGCCAT 58.416 50.000 0.00 0.00 37.81 4.40
289 290 1.210234 TGACAGTGGACCATAGCCATG 59.790 52.381 0.00 0.00 37.81 3.66
290 291 1.210478 GACAGTGGACCATAGCCATGT 59.790 52.381 0.00 0.00 37.81 3.21
291 292 1.635487 ACAGTGGACCATAGCCATGTT 59.365 47.619 0.00 0.00 37.81 2.71
292 293 2.019249 CAGTGGACCATAGCCATGTTG 58.981 52.381 0.00 0.00 37.81 3.33
293 294 1.064463 AGTGGACCATAGCCATGTTGG 60.064 52.381 0.00 0.00 41.55 3.77
303 304 2.051941 CCATGTTGGCTTGCCAAGT 58.948 52.632 25.26 15.14 0.00 3.16
304 305 1.255882 CCATGTTGGCTTGCCAAGTA 58.744 50.000 25.26 17.85 0.00 2.24
305 306 1.617850 CCATGTTGGCTTGCCAAGTAA 59.382 47.619 25.26 15.13 0.00 2.24
306 307 2.610232 CCATGTTGGCTTGCCAAGTAAC 60.610 50.000 25.26 15.67 0.00 2.50
307 308 1.036707 TGTTGGCTTGCCAAGTAACC 58.963 50.000 25.26 14.51 31.30 2.85
308 309 0.039527 GTTGGCTTGCCAAGTAACCG 60.040 55.000 25.26 0.00 0.00 4.44
309 310 1.801309 TTGGCTTGCCAAGTAACCGC 61.801 55.000 21.59 0.00 0.00 5.68
310 311 2.265182 GGCTTGCCAAGTAACCGCA 61.265 57.895 6.28 0.00 0.00 5.69
311 312 1.210155 GCTTGCCAAGTAACCGCAG 59.790 57.895 6.28 0.00 33.30 5.18
335 336 6.675987 GGATACGTCCAGATACGAATAAAGT 58.324 40.000 3.10 0.00 45.68 2.66
336 337 6.581542 GGATACGTCCAGATACGAATAAAGTG 59.418 42.308 3.10 0.00 45.68 3.16
337 338 5.571784 ACGTCCAGATACGAATAAAGTGA 57.428 39.130 3.10 0.00 45.68 3.41
338 339 5.338365 ACGTCCAGATACGAATAAAGTGAC 58.662 41.667 3.10 0.00 45.68 3.67
339 340 4.738740 CGTCCAGATACGAATAAAGTGACC 59.261 45.833 0.00 0.00 45.68 4.02
340 341 4.738740 GTCCAGATACGAATAAAGTGACCG 59.261 45.833 0.00 0.00 0.00 4.79
341 342 4.400251 TCCAGATACGAATAAAGTGACCGT 59.600 41.667 0.00 0.00 37.27 4.83
342 343 5.589855 TCCAGATACGAATAAAGTGACCGTA 59.410 40.000 0.00 0.00 39.53 4.02
343 344 6.263842 TCCAGATACGAATAAAGTGACCGTAT 59.736 38.462 0.00 0.00 45.42 3.06
344 345 6.921857 CCAGATACGAATAAAGTGACCGTATT 59.078 38.462 0.00 0.00 43.62 1.89
345 346 7.437267 CCAGATACGAATAAAGTGACCGTATTT 59.563 37.037 0.00 0.00 43.62 1.40
346 347 8.266682 CAGATACGAATAAAGTGACCGTATTTG 58.733 37.037 0.00 0.00 43.62 2.32
347 348 5.212589 ACGAATAAAGTGACCGTATTTGC 57.787 39.130 0.00 0.00 0.00 3.68
348 349 4.691685 ACGAATAAAGTGACCGTATTTGCA 59.308 37.500 0.00 0.00 0.00 4.08
349 350 5.019498 CGAATAAAGTGACCGTATTTGCAC 58.981 41.667 0.00 0.00 0.00 4.57
350 351 2.961522 AAAGTGACCGTATTTGCACG 57.038 45.000 0.00 0.00 41.59 5.34
351 352 2.157834 AAGTGACCGTATTTGCACGA 57.842 45.000 0.00 0.00 44.69 4.35
352 353 1.710013 AGTGACCGTATTTGCACGAG 58.290 50.000 0.00 0.00 44.69 4.18
353 354 1.271379 AGTGACCGTATTTGCACGAGA 59.729 47.619 0.00 0.00 44.69 4.04
354 355 2.063266 GTGACCGTATTTGCACGAGAA 58.937 47.619 0.00 0.00 44.69 2.87
355 356 2.671396 GTGACCGTATTTGCACGAGAAT 59.329 45.455 0.00 0.00 44.69 2.40
356 357 2.670905 TGACCGTATTTGCACGAGAATG 59.329 45.455 0.00 0.00 44.69 2.67
357 358 1.396996 ACCGTATTTGCACGAGAATGC 59.603 47.619 0.00 0.00 44.69 3.56
368 369 4.722194 GCACGAGAATGCAAGTTAAATGA 58.278 39.130 0.00 0.00 45.39 2.57
369 370 4.554973 GCACGAGAATGCAAGTTAAATGAC 59.445 41.667 0.00 0.00 45.39 3.06
370 371 5.088739 CACGAGAATGCAAGTTAAATGACC 58.911 41.667 0.00 0.00 0.00 4.02
371 372 4.759693 ACGAGAATGCAAGTTAAATGACCA 59.240 37.500 0.00 0.00 0.00 4.02
372 373 5.088739 CGAGAATGCAAGTTAAATGACCAC 58.911 41.667 0.00 0.00 0.00 4.16
373 374 5.334802 CGAGAATGCAAGTTAAATGACCACA 60.335 40.000 0.00 0.00 0.00 4.17
374 375 5.772521 AGAATGCAAGTTAAATGACCACAC 58.227 37.500 0.00 0.00 0.00 3.82
375 376 5.301551 AGAATGCAAGTTAAATGACCACACA 59.698 36.000 0.00 0.00 0.00 3.72
376 377 5.726980 ATGCAAGTTAAATGACCACACAT 57.273 34.783 0.00 0.00 0.00 3.21
377 378 5.119931 TGCAAGTTAAATGACCACACATC 57.880 39.130 0.00 0.00 0.00 3.06
378 379 4.022416 TGCAAGTTAAATGACCACACATCC 60.022 41.667 0.00 0.00 0.00 3.51
379 380 4.722194 CAAGTTAAATGACCACACATCCG 58.278 43.478 0.00 0.00 0.00 4.18
380 381 4.015872 AGTTAAATGACCACACATCCGT 57.984 40.909 0.00 0.00 0.00 4.69
381 382 5.155278 AGTTAAATGACCACACATCCGTA 57.845 39.130 0.00 0.00 0.00 4.02
382 383 5.741011 AGTTAAATGACCACACATCCGTAT 58.259 37.500 0.00 0.00 0.00 3.06
383 384 6.177610 AGTTAAATGACCACACATCCGTATT 58.822 36.000 0.00 0.00 0.00 1.89
384 385 6.657541 AGTTAAATGACCACACATCCGTATTT 59.342 34.615 0.00 0.00 0.00 1.40
385 386 5.975693 AAATGACCACACATCCGTATTTT 57.024 34.783 0.00 0.00 0.00 1.82
386 387 5.975693 AATGACCACACATCCGTATTTTT 57.024 34.783 0.00 0.00 0.00 1.94
387 388 7.455641 AAATGACCACACATCCGTATTTTTA 57.544 32.000 0.00 0.00 0.00 1.52
388 389 7.455641 AATGACCACACATCCGTATTTTTAA 57.544 32.000 0.00 0.00 0.00 1.52
389 390 6.879276 TGACCACACATCCGTATTTTTAAA 57.121 33.333 0.00 0.00 0.00 1.52
390 391 6.904498 TGACCACACATCCGTATTTTTAAAG 58.096 36.000 0.00 0.00 0.00 1.85
391 392 6.487331 TGACCACACATCCGTATTTTTAAAGT 59.513 34.615 0.00 0.00 0.00 2.66
392 393 7.013464 TGACCACACATCCGTATTTTTAAAGTT 59.987 33.333 0.00 0.00 0.00 2.66
393 394 7.364970 ACCACACATCCGTATTTTTAAAGTTC 58.635 34.615 0.00 0.00 0.00 3.01
394 395 7.229907 ACCACACATCCGTATTTTTAAAGTTCT 59.770 33.333 0.00 0.00 0.00 3.01
395 396 8.723311 CCACACATCCGTATTTTTAAAGTTCTA 58.277 33.333 0.00 0.00 0.00 2.10
400 401 9.931210 CATCCGTATTTTTAAAGTTCTATCACC 57.069 33.333 0.00 0.00 0.00 4.02
401 402 9.675464 ATCCGTATTTTTAAAGTTCTATCACCA 57.325 29.630 0.00 0.00 0.00 4.17
402 403 9.504708 TCCGTATTTTTAAAGTTCTATCACCAA 57.495 29.630 0.00 0.00 0.00 3.67
410 411 8.740123 TTAAAGTTCTATCACCAAACTGAACA 57.260 30.769 0.00 0.00 37.03 3.18
411 412 7.823745 AAAGTTCTATCACCAAACTGAACAT 57.176 32.000 0.00 0.00 37.03 2.71
412 413 7.440523 AAGTTCTATCACCAAACTGAACATC 57.559 36.000 0.00 0.00 37.03 3.06
413 414 5.940470 AGTTCTATCACCAAACTGAACATCC 59.060 40.000 0.00 0.00 37.03 3.51
414 415 5.497464 TCTATCACCAAACTGAACATCCA 57.503 39.130 0.00 0.00 0.00 3.41
415 416 5.875224 TCTATCACCAAACTGAACATCCAA 58.125 37.500 0.00 0.00 0.00 3.53
416 417 4.853924 ATCACCAAACTGAACATCCAAC 57.146 40.909 0.00 0.00 0.00 3.77
417 418 3.625853 TCACCAAACTGAACATCCAACA 58.374 40.909 0.00 0.00 0.00 3.33
418 419 3.380004 TCACCAAACTGAACATCCAACAC 59.620 43.478 0.00 0.00 0.00 3.32
419 420 3.130164 CACCAAACTGAACATCCAACACA 59.870 43.478 0.00 0.00 0.00 3.72
420 421 3.766591 ACCAAACTGAACATCCAACACAA 59.233 39.130 0.00 0.00 0.00 3.33
421 422 4.111916 CCAAACTGAACATCCAACACAAC 58.888 43.478 0.00 0.00 0.00 3.32
422 423 4.142182 CCAAACTGAACATCCAACACAACT 60.142 41.667 0.00 0.00 0.00 3.16
423 424 5.410067 CAAACTGAACATCCAACACAACTT 58.590 37.500 0.00 0.00 0.00 2.66
424 425 4.900635 ACTGAACATCCAACACAACTTC 57.099 40.909 0.00 0.00 0.00 3.01
425 426 4.526970 ACTGAACATCCAACACAACTTCT 58.473 39.130 0.00 0.00 0.00 2.85
426 427 5.680619 ACTGAACATCCAACACAACTTCTA 58.319 37.500 0.00 0.00 0.00 2.10
427 428 6.299141 ACTGAACATCCAACACAACTTCTAT 58.701 36.000 0.00 0.00 0.00 1.98
428 429 6.205464 ACTGAACATCCAACACAACTTCTATG 59.795 38.462 0.00 0.00 0.00 2.23
429 430 6.295249 TGAACATCCAACACAACTTCTATGA 58.705 36.000 0.00 0.00 0.00 2.15
430 431 6.204688 TGAACATCCAACACAACTTCTATGAC 59.795 38.462 0.00 0.00 0.00 3.06
431 432 5.003804 ACATCCAACACAACTTCTATGACC 58.996 41.667 0.00 0.00 0.00 4.02
432 433 4.974645 TCCAACACAACTTCTATGACCT 57.025 40.909 0.00 0.00 0.00 3.85
433 434 4.641396 TCCAACACAACTTCTATGACCTG 58.359 43.478 0.00 0.00 0.00 4.00
434 435 4.102524 TCCAACACAACTTCTATGACCTGT 59.897 41.667 0.00 0.00 0.00 4.00
435 436 4.214119 CCAACACAACTTCTATGACCTGTG 59.786 45.833 0.00 0.00 39.96 3.66
436 437 4.008074 ACACAACTTCTATGACCTGTGG 57.992 45.455 5.15 0.00 38.74 4.17
437 438 3.391296 ACACAACTTCTATGACCTGTGGT 59.609 43.478 5.15 0.00 38.74 4.16
438 439 3.748048 CACAACTTCTATGACCTGTGGTG 59.252 47.826 0.00 0.00 35.25 4.17
439 440 3.646162 ACAACTTCTATGACCTGTGGTGA 59.354 43.478 0.00 0.00 35.25 4.02
440 441 4.287067 ACAACTTCTATGACCTGTGGTGAT 59.713 41.667 0.00 0.00 35.25 3.06
441 442 5.483937 ACAACTTCTATGACCTGTGGTGATA 59.516 40.000 0.00 0.00 35.25 2.15
442 443 6.156949 ACAACTTCTATGACCTGTGGTGATAT 59.843 38.462 0.00 0.00 35.25 1.63
443 444 6.814954 ACTTCTATGACCTGTGGTGATATT 57.185 37.500 0.00 0.00 35.25 1.28
444 445 7.914427 ACTTCTATGACCTGTGGTGATATTA 57.086 36.000 0.00 0.00 35.25 0.98
445 446 7.727181 ACTTCTATGACCTGTGGTGATATTAC 58.273 38.462 0.00 0.00 35.25 1.89
446 447 6.665992 TCTATGACCTGTGGTGATATTACC 57.334 41.667 9.72 9.72 41.24 2.85
447 448 6.382087 TCTATGACCTGTGGTGATATTACCT 58.618 40.000 16.91 0.00 41.43 3.08
448 449 5.552870 ATGACCTGTGGTGATATTACCTC 57.447 43.478 16.91 13.79 41.43 3.85
455 456 6.828273 CCTGTGGTGATATTACCTCATTTTCA 59.172 38.462 18.47 6.58 41.71 2.69
475 476 2.900122 TACTACCACTCGCGTTGTAC 57.100 50.000 5.77 0.00 0.00 2.90
477 478 1.068748 ACTACCACTCGCGTTGTACTG 60.069 52.381 5.77 1.98 0.00 2.74
478 479 0.387622 TACCACTCGCGTTGTACTGC 60.388 55.000 5.77 0.00 0.00 4.40
479 480 1.663388 CCACTCGCGTTGTACTGCA 60.663 57.895 5.77 0.00 0.00 4.41
480 481 1.617755 CCACTCGCGTTGTACTGCAG 61.618 60.000 13.48 13.48 0.00 4.41
481 482 0.939577 CACTCGCGTTGTACTGCAGT 60.940 55.000 25.12 25.12 0.00 4.40
483 484 0.161658 CTCGCGTTGTACTGCAGTTG 59.838 55.000 27.06 11.13 0.00 3.16
484 485 1.204062 CGCGTTGTACTGCAGTTGG 59.796 57.895 27.06 10.93 0.00 3.77
485 486 1.495584 CGCGTTGTACTGCAGTTGGT 61.496 55.000 27.06 2.51 0.00 3.67
486 487 0.661020 GCGTTGTACTGCAGTTGGTT 59.339 50.000 27.06 0.99 0.00 3.67
487 488 1.596954 GCGTTGTACTGCAGTTGGTTG 60.597 52.381 27.06 13.66 0.00 3.77
489 490 2.096819 CGTTGTACTGCAGTTGGTTGTT 59.903 45.455 27.06 0.00 0.00 2.83
490 491 3.691498 GTTGTACTGCAGTTGGTTGTTC 58.309 45.455 27.06 6.39 0.00 3.18
491 492 1.937223 TGTACTGCAGTTGGTTGTTCG 59.063 47.619 27.06 0.00 0.00 3.95
492 493 1.937899 GTACTGCAGTTGGTTGTTCGT 59.062 47.619 27.06 0.00 0.00 3.85
493 494 1.459450 ACTGCAGTTGGTTGTTCGTT 58.541 45.000 15.25 0.00 0.00 3.85
494 495 1.132262 ACTGCAGTTGGTTGTTCGTTG 59.868 47.619 15.25 0.00 0.00 4.10
495 496 0.453793 TGCAGTTGGTTGTTCGTTGG 59.546 50.000 0.00 0.00 0.00 3.77
506 507 4.504858 GTTGTTCGTTGGGATCATCTACT 58.495 43.478 0.00 0.00 0.00 2.57
594 847 6.603997 ACACACAAAACCACCTAATTTACTCA 59.396 34.615 0.00 0.00 0.00 3.41
690 943 5.447548 CCAAACAAATGAAACACAAAGCCAG 60.448 40.000 0.00 0.00 0.00 4.85
696 949 2.828520 TGAAACACAAAGCCAGGAAACA 59.171 40.909 0.00 0.00 0.00 2.83
715 992 7.282901 AGGAAACATTTTTCACCCTTTTTCATG 59.717 33.333 6.67 0.00 42.72 3.07
718 995 5.752955 ACATTTTTCACCCTTTTTCATGTCG 59.247 36.000 0.00 0.00 0.00 4.35
719 996 4.993029 TTTTCACCCTTTTTCATGTCGT 57.007 36.364 0.00 0.00 0.00 4.34
720 997 4.561735 TTTCACCCTTTTTCATGTCGTC 57.438 40.909 0.00 0.00 0.00 4.20
772 1069 6.412362 AAGAGAGAGAAAAGTAGCAGTTGA 57.588 37.500 0.00 0.00 0.00 3.18
781 1078 2.183679 AGTAGCAGTTGAGGGGAAGAG 58.816 52.381 0.00 0.00 0.00 2.85
783 1080 1.734655 AGCAGTTGAGGGGAAGAGAA 58.265 50.000 0.00 0.00 0.00 2.87
785 1082 1.625818 GCAGTTGAGGGGAAGAGAAGA 59.374 52.381 0.00 0.00 0.00 2.87
786 1083 2.354604 GCAGTTGAGGGGAAGAGAAGAG 60.355 54.545 0.00 0.00 0.00 2.85
787 1084 3.169099 CAGTTGAGGGGAAGAGAAGAGA 58.831 50.000 0.00 0.00 0.00 3.10
788 1085 3.580458 CAGTTGAGGGGAAGAGAAGAGAA 59.420 47.826 0.00 0.00 0.00 2.87
789 1086 3.837731 AGTTGAGGGGAAGAGAAGAGAAG 59.162 47.826 0.00 0.00 0.00 2.85
790 1087 3.835395 GTTGAGGGGAAGAGAAGAGAAGA 59.165 47.826 0.00 0.00 0.00 2.87
791 1088 3.436243 TGAGGGGAAGAGAAGAGAAGAC 58.564 50.000 0.00 0.00 0.00 3.01
792 1089 3.181417 TGAGGGGAAGAGAAGAGAAGACA 60.181 47.826 0.00 0.00 0.00 3.41
857 1154 6.942163 TCCATTCCTCCTCTATAAATGGAG 57.058 41.667 10.28 8.01 46.39 3.86
1185 1537 1.562783 AGGAGCTGGTACTTGGTCTC 58.437 55.000 14.05 5.63 32.74 3.36
1186 1538 0.537653 GGAGCTGGTACTTGGTCTCC 59.462 60.000 14.05 9.67 34.13 3.71
1188 1540 0.910088 AGCTGGTACTTGGTCTCCCC 60.910 60.000 0.00 0.00 0.00 4.81
1190 1542 1.657804 CTGGTACTTGGTCTCCCCTT 58.342 55.000 0.00 0.00 0.00 3.95
1191 1543 1.555533 CTGGTACTTGGTCTCCCCTTC 59.444 57.143 0.00 0.00 0.00 3.46
1192 1544 1.151413 TGGTACTTGGTCTCCCCTTCT 59.849 52.381 0.00 0.00 0.00 2.85
1193 1545 1.832366 GGTACTTGGTCTCCCCTTCTC 59.168 57.143 0.00 0.00 0.00 2.87
1194 1546 1.832366 GTACTTGGTCTCCCCTTCTCC 59.168 57.143 0.00 0.00 0.00 3.71
1195 1547 0.547954 ACTTGGTCTCCCCTTCTCCC 60.548 60.000 0.00 0.00 0.00 4.30
1196 1548 1.229853 TTGGTCTCCCCTTCTCCCC 60.230 63.158 0.00 0.00 0.00 4.81
1197 1549 2.367107 GGTCTCCCCTTCTCCCCC 60.367 72.222 0.00 0.00 0.00 5.40
1198 1550 2.788589 GTCTCCCCTTCTCCCCCT 59.211 66.667 0.00 0.00 0.00 4.79
1199 1551 1.383386 GTCTCCCCTTCTCCCCCTC 60.383 68.421 0.00 0.00 0.00 4.30
1204 1556 3.711782 CCTTCTCCCCCTCCCCCT 61.712 72.222 0.00 0.00 0.00 4.79
1205 1557 2.040359 CTTCTCCCCCTCCCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
1231 1589 3.838795 CACGCTTACGCTCACGCC 61.839 66.667 0.00 0.00 45.53 5.68
1311 1672 2.073816 GGCAACGGAAATCTTCTTCGA 58.926 47.619 0.00 0.00 0.00 3.71
1312 1673 2.678336 GGCAACGGAAATCTTCTTCGAT 59.322 45.455 0.00 0.00 0.00 3.59
1313 1674 3.242446 GGCAACGGAAATCTTCTTCGATC 60.242 47.826 0.00 0.00 0.00 3.69
1314 1675 3.619038 GCAACGGAAATCTTCTTCGATCT 59.381 43.478 0.00 0.00 0.00 2.75
1315 1676 4.260011 GCAACGGAAATCTTCTTCGATCTC 60.260 45.833 0.00 0.00 0.00 2.75
1316 1677 4.048241 ACGGAAATCTTCTTCGATCTCC 57.952 45.455 0.00 0.00 29.04 3.71
1331 1692 4.969359 TCGATCTCCCCTCTTTTATTTCCT 59.031 41.667 0.00 0.00 0.00 3.36
1354 1715 1.984026 CCCCACATGTTGGCCTTCC 60.984 63.158 10.52 0.00 45.37 3.46
1372 1733 1.133407 TCCTGTTCGTGTTTGTTTGGC 59.867 47.619 0.00 0.00 0.00 4.52
1386 1747 4.002506 TGGCGATGGCACGTCACT 62.003 61.111 11.60 0.00 42.82 3.41
1470 1833 0.035317 TATCTGCATGGATCACGCCC 59.965 55.000 0.00 0.00 0.00 6.13
1564 1931 4.218417 GCTGGACAAATCACAAATGGTACT 59.782 41.667 0.00 0.00 0.00 2.73
1566 1933 6.403636 GCTGGACAAATCACAAATGGTACTAG 60.404 42.308 0.00 0.00 0.00 2.57
1576 1943 7.318141 TCACAAATGGTACTAGTACTTGCTAC 58.682 38.462 27.71 13.63 36.36 3.58
1591 1958 0.097674 GCTACAAGTTGCTGCATCCG 59.902 55.000 1.84 0.00 0.00 4.18
1611 1980 1.203287 GTTTGCCATTTCTGCTCTCCC 59.797 52.381 0.00 0.00 0.00 4.30
1661 2041 1.203994 AGACAATGATGGCTTGCTTGC 59.796 47.619 0.00 0.00 44.89 4.01
1662 2042 1.203994 GACAATGATGGCTTGCTTGCT 59.796 47.619 0.00 0.00 0.00 3.91
1663 2043 1.621814 ACAATGATGGCTTGCTTGCTT 59.378 42.857 0.00 0.00 0.00 3.91
1664 2044 1.999735 CAATGATGGCTTGCTTGCTTG 59.000 47.619 1.96 0.00 0.00 4.01
1759 2145 9.898152 TCCAACCTTAATTTGATTTCTTGTTTT 57.102 25.926 0.00 0.00 0.00 2.43
1952 2359 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1953 2360 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1954 2361 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1955 2362 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1956 2363 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1957 2364 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1958 2365 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1959 2366 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1970 2377 3.397482 TCTCTCTCTCTTGCTTGTTTGC 58.603 45.455 0.00 0.00 0.00 3.68
2030 2437 4.698201 TGTTTGATGAGTGGTGTTCCTA 57.302 40.909 0.00 0.00 34.23 2.94
2043 2450 0.305922 GTTCCTATGCGTGCATGCTC 59.694 55.000 29.83 14.84 37.82 4.26
2058 2465 2.694760 GCTCCCTGCGCCTTCTTTG 61.695 63.158 4.18 0.00 0.00 2.77
2059 2466 1.302832 CTCCCTGCGCCTTCTTTGT 60.303 57.895 4.18 0.00 0.00 2.83
2060 2467 0.036388 CTCCCTGCGCCTTCTTTGTA 60.036 55.000 4.18 0.00 0.00 2.41
2061 2468 0.036388 TCCCTGCGCCTTCTTTGTAG 60.036 55.000 4.18 0.00 0.00 2.74
2062 2469 0.321653 CCCTGCGCCTTCTTTGTAGT 60.322 55.000 4.18 0.00 0.00 2.73
2063 2470 1.066430 CCCTGCGCCTTCTTTGTAGTA 60.066 52.381 4.18 0.00 0.00 1.82
2075 2482 7.756722 GCCTTCTTTGTAGTAGTACGTATCAAA 59.243 37.037 0.00 4.22 30.95 2.69
2239 2652 0.099968 CTGCATGCTCCAAATGGACG 59.900 55.000 20.33 0.00 39.78 4.79
2240 2653 0.322366 TGCATGCTCCAAATGGACGA 60.322 50.000 20.33 0.00 39.78 4.20
2266 2684 1.201429 TTGGAGTGCCCCTTCTCTCC 61.201 60.000 0.00 0.00 43.48 3.71
2273 2691 1.456705 CCCCTTCTCTCCTCCCTCG 60.457 68.421 0.00 0.00 0.00 4.63
2274 2692 1.456705 CCCTTCTCTCCTCCCTCGG 60.457 68.421 0.00 0.00 0.00 4.63
2275 2693 2.131067 CCTTCTCTCCTCCCTCGGC 61.131 68.421 0.00 0.00 0.00 5.54
2276 2694 1.076339 CTTCTCTCCTCCCTCGGCT 60.076 63.158 0.00 0.00 0.00 5.52
2277 2695 1.076632 TTCTCTCCTCCCTCGGCTC 60.077 63.158 0.00 0.00 0.00 4.70
2295 2713 4.621747 CGGCTCCCTCTAATTATTGCCTAG 60.622 50.000 0.00 0.00 37.22 3.02
2299 2720 6.574662 GCTCCCTCTAATTATTGCCTAGTACC 60.575 46.154 0.00 0.00 0.00 3.34
2300 2721 6.387127 TCCCTCTAATTATTGCCTAGTACCA 58.613 40.000 0.00 0.00 0.00 3.25
2301 2722 7.023120 TCCCTCTAATTATTGCCTAGTACCAT 58.977 38.462 0.00 0.00 0.00 3.55
2302 2723 7.516209 TCCCTCTAATTATTGCCTAGTACCATT 59.484 37.037 0.00 0.00 0.00 3.16
2362 2801 6.496911 TCCCTATACATGCACAGCTAGATTAA 59.503 38.462 0.00 0.00 0.00 1.40
2368 2807 5.882000 ACATGCACAGCTAGATTAAATGTGA 59.118 36.000 7.75 0.00 43.02 3.58
2408 2847 3.421844 GAAGAGTAGTGGGCATTGGTTT 58.578 45.455 0.00 0.00 0.00 3.27
2409 2848 3.525800 AGAGTAGTGGGCATTGGTTTT 57.474 42.857 0.00 0.00 0.00 2.43
2410 2849 3.157087 AGAGTAGTGGGCATTGGTTTTG 58.843 45.455 0.00 0.00 0.00 2.44
2411 2850 2.231235 GAGTAGTGGGCATTGGTTTTGG 59.769 50.000 0.00 0.00 0.00 3.28
2424 2863 2.167487 TGGTTTTGGTTGCCAGTTTCTC 59.833 45.455 0.00 0.00 33.81 2.87
2579 3037 2.135189 TCCATCTACTCCCCCATTTGG 58.865 52.381 0.00 0.00 0.00 3.28
2696 3158 2.940890 ATATGGTGCGCCGGTCCAAG 62.941 60.000 12.58 0.00 37.67 3.61
2741 3203 9.740239 TTAAATGTACCACTACGACTATCAATC 57.260 33.333 0.00 0.00 0.00 2.67
2746 3208 6.045072 ACCACTACGACTATCAATCCAAAA 57.955 37.500 0.00 0.00 0.00 2.44
2909 3385 9.841295 ACTTTTACTAACTGTCCTTGTTATTGA 57.159 29.630 0.00 0.00 30.73 2.57
2911 3387 8.611654 TTTACTAACTGTCCTTGTTATTGACC 57.388 34.615 0.00 0.00 30.73 4.02
2912 3388 6.182507 ACTAACTGTCCTTGTTATTGACCA 57.817 37.500 0.00 0.00 30.73 4.02
2913 3389 6.597562 ACTAACTGTCCTTGTTATTGACCAA 58.402 36.000 0.00 0.00 30.73 3.67
3001 3558 3.181528 CGGTGCTTTGCATGCAAATTAAG 60.182 43.478 38.19 29.10 43.78 1.85
3012 3569 6.991531 TGCATGCAAATTAAGAACTTCCTTTT 59.008 30.769 20.30 0.00 0.00 2.27
3077 3634 6.207417 CAGTAGAGGGTTTTGAACACATGATT 59.793 38.462 0.00 0.00 37.23 2.57
3080 3637 7.219484 AGAGGGTTTTGAACACATGATTTAG 57.781 36.000 0.00 0.00 37.23 1.85
3083 3640 7.209475 AGGGTTTTGAACACATGATTTAGTTG 58.791 34.615 0.00 0.00 37.23 3.16
3107 3664 1.936203 GCTGAAATGCGCAACCATTGT 60.936 47.619 17.11 0.00 35.70 2.71
3132 3689 5.859495 AGTACTGCCTGCTTAATATTCCTC 58.141 41.667 0.00 0.00 0.00 3.71
3178 3735 0.322008 GAGAGCCTGTTGGGGAAGTG 60.322 60.000 0.00 0.00 35.12 3.16
3235 3792 1.449246 GGTTCGCTCTGCTGATGCT 60.449 57.895 11.23 0.00 40.48 3.79
3253 3810 1.834188 CTTTCATTGCCTTACCCGGT 58.166 50.000 0.00 0.00 0.00 5.28
3254 3811 2.942306 GCTTTCATTGCCTTACCCGGTA 60.942 50.000 0.00 0.00 0.00 4.02
3255 3812 2.406596 TTCATTGCCTTACCCGGTAC 57.593 50.000 0.00 0.00 0.00 3.34
3308 3865 3.324689 ACATGGATGGATCTCCTGTCAT 58.675 45.455 0.00 0.00 36.20 3.06
3342 3899 1.197721 CACTGGATTCCTCAACGCAAC 59.802 52.381 3.95 0.00 0.00 4.17
3359 3917 4.171005 CGCAACATCTGAAAATCTGCATT 58.829 39.130 0.00 0.00 0.00 3.56
3486 4044 1.400846 CCTTGTAGCAGCAGCATCAAG 59.599 52.381 21.77 21.77 44.90 3.02
3670 4230 3.493303 GCTCCCAGTCCCATCCCC 61.493 72.222 0.00 0.00 0.00 4.81
3671 4231 2.774351 CTCCCAGTCCCATCCCCC 60.774 72.222 0.00 0.00 0.00 5.40
3729 4289 9.812347 AGGATGGCAAATTATTGATCAATACTA 57.188 29.630 24.55 13.69 38.94 1.82
3730 4290 9.846248 GGATGGCAAATTATTGATCAATACTAC 57.154 33.333 24.55 13.57 38.94 2.73
3731 4291 9.546909 GATGGCAAATTATTGATCAATACTACG 57.453 33.333 24.55 15.43 38.94 3.51
3732 4292 8.445275 TGGCAAATTATTGATCAATACTACGT 57.555 30.769 24.55 8.60 38.94 3.57
3920 4485 1.407979 GTAGACGACCCATCCACGAAT 59.592 52.381 0.00 0.00 0.00 3.34
4036 4601 1.214305 TTGTGCTTGAGGGGCCCTAT 61.214 55.000 28.92 11.34 31.76 2.57
4051 4616 4.280929 GGGCCCTATCAAATGTTGTATTCC 59.719 45.833 17.04 0.00 0.00 3.01
4054 4619 6.294731 GGCCCTATCAAATGTTGTATTCCATC 60.295 42.308 0.00 0.00 0.00 3.51
4083 4678 4.273318 AGGTGGAAGAAATCTGTTATGCC 58.727 43.478 0.00 0.00 0.00 4.40
4119 4714 7.128883 TGCTTAGATCCCCCTTTTACTATTCTT 59.871 37.037 0.00 0.00 0.00 2.52
4120 4715 7.999545 GCTTAGATCCCCCTTTTACTATTCTTT 59.000 37.037 0.00 0.00 0.00 2.52
4121 4716 9.562408 CTTAGATCCCCCTTTTACTATTCTTTC 57.438 37.037 0.00 0.00 0.00 2.62
4122 4717 7.773099 AGATCCCCCTTTTACTATTCTTTCT 57.227 36.000 0.00 0.00 0.00 2.52
4251 4853 2.467566 ACGTGGATGGGTTCTACAAC 57.532 50.000 0.00 0.00 35.66 3.32
4269 4871 5.825593 ACAACTTCTTCCTGTCCTTCATA 57.174 39.130 0.00 0.00 0.00 2.15
4278 4880 2.486191 CCTGTCCTTCATAGACATGGCC 60.486 54.545 0.00 0.00 43.04 5.36
4332 4934 0.033601 ACCTCGTCATCTCAGCTCCT 60.034 55.000 0.00 0.00 0.00 3.69
4378 4980 9.074576 TCAAGCTCGAGGTAATTATATACAGAA 57.925 33.333 18.94 0.00 0.00 3.02
4564 5166 1.592543 GCATTGCGTCGTCATGATACA 59.407 47.619 0.00 0.00 0.00 2.29
4587 5189 0.523072 CATGGTGGAAGCGTTTCTGG 59.477 55.000 11.94 0.00 36.92 3.86
4613 5215 2.806244 AGTAACATCTGACCGTGCAAAC 59.194 45.455 0.00 0.00 0.00 2.93
4667 5271 3.131396 CCTTGTCAGTCGTAGCTTTTGT 58.869 45.455 0.00 0.00 0.00 2.83
4668 5272 3.059597 CCTTGTCAGTCGTAGCTTTTGTG 60.060 47.826 0.00 0.00 0.00 3.33
4768 5373 6.486320 GTCGTAGCTTAGGTAGTAGAAGGAAT 59.514 42.308 0.00 0.00 0.00 3.01
4868 5476 2.126307 CGTCTCGCTCTGTGTGGG 60.126 66.667 0.00 0.00 0.00 4.61
4883 5517 0.744414 GTGGGTCATGGACGATGTGG 60.744 60.000 0.00 0.00 32.65 4.17
4923 5560 2.788786 GTCGTAACGGAAGAAACGAACA 59.211 45.455 0.00 0.00 46.67 3.18
4936 5573 2.335316 ACGAACAGTTTGTAGGCCAA 57.665 45.000 5.01 0.00 0.00 4.52
4949 5586 1.958288 AGGCCAATGTGTCCTAGACT 58.042 50.000 5.01 0.00 33.15 3.24
4950 5587 1.834263 AGGCCAATGTGTCCTAGACTC 59.166 52.381 5.01 0.00 33.15 3.36
5152 5804 2.668550 GTGTGTCGGCAAGGGACC 60.669 66.667 0.00 0.00 33.46 4.46
5284 5954 1.456165 GTTGAGACGCCGTTTTCTCTC 59.544 52.381 6.09 1.61 39.30 3.20
5290 5960 0.708918 CGCCGTTTTCTCTCGTCTTC 59.291 55.000 0.00 0.00 0.00 2.87
5342 6016 1.747206 CGGCCCATAAAAGGAGACTGG 60.747 57.143 0.00 0.00 42.68 4.00
5447 6121 3.565307 GGATGTGAAAGGAATGGCCATA 58.435 45.455 21.15 0.00 40.02 2.74
5448 6122 3.571401 GGATGTGAAAGGAATGGCCATAG 59.429 47.826 21.15 0.00 40.02 2.23
5449 6123 3.017048 TGTGAAAGGAATGGCCATAGG 57.983 47.619 21.15 0.00 40.02 2.57
5450 6124 2.580322 TGTGAAAGGAATGGCCATAGGA 59.420 45.455 21.15 0.00 40.02 2.94
5451 6125 3.205056 TGTGAAAGGAATGGCCATAGGAT 59.795 43.478 21.15 2.09 40.02 3.24
5452 6126 4.218312 GTGAAAGGAATGGCCATAGGATT 58.782 43.478 21.15 12.36 40.02 3.01
5549 6225 3.526825 GCATATTCGTGCGGTTTCC 57.473 52.632 0.00 0.00 35.10 3.13
5560 6236 1.148759 GCGGTTTCCTCGATGCTCTC 61.149 60.000 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.797556 AAGCACGTCTTTAAAAAGAATTAACTT 57.202 25.926 6.72 5.35 45.77 2.66
27 28 9.233232 CAAGCACGTCTTTAAAAAGAATTAACT 57.767 29.630 6.72 0.04 45.77 2.24
28 29 8.476925 CCAAGCACGTCTTTAAAAAGAATTAAC 58.523 33.333 6.72 0.00 45.77 2.01
29 30 8.192110 ACCAAGCACGTCTTTAAAAAGAATTAA 58.808 29.630 6.72 0.00 45.77 1.40
30 31 7.646130 CACCAAGCACGTCTTTAAAAAGAATTA 59.354 33.333 6.72 0.00 45.77 1.40
31 32 6.475402 CACCAAGCACGTCTTTAAAAAGAATT 59.525 34.615 6.72 0.00 45.77 2.17
32 33 5.977129 CACCAAGCACGTCTTTAAAAAGAAT 59.023 36.000 6.72 0.00 45.77 2.40
33 34 5.106078 ACACCAAGCACGTCTTTAAAAAGAA 60.106 36.000 6.72 0.00 45.77 2.52
34 35 4.396790 ACACCAAGCACGTCTTTAAAAAGA 59.603 37.500 1.00 1.00 42.41 2.52
35 36 4.668289 ACACCAAGCACGTCTTTAAAAAG 58.332 39.130 0.00 0.00 37.36 2.27
36 37 4.705337 ACACCAAGCACGTCTTTAAAAA 57.295 36.364 0.00 0.00 31.27 1.94
37 38 4.877251 ACTACACCAAGCACGTCTTTAAAA 59.123 37.500 0.00 0.00 31.27 1.52
38 39 4.271533 CACTACACCAAGCACGTCTTTAAA 59.728 41.667 0.00 0.00 31.27 1.52
39 40 3.805422 CACTACACCAAGCACGTCTTTAA 59.195 43.478 0.00 0.00 31.27 1.52
40 41 3.386486 CACTACACCAAGCACGTCTTTA 58.614 45.455 0.00 0.00 31.27 1.85
41 42 2.210116 CACTACACCAAGCACGTCTTT 58.790 47.619 0.00 0.00 31.27 2.52
42 43 1.540363 CCACTACACCAAGCACGTCTT 60.540 52.381 0.00 0.00 34.78 3.01
43 44 0.033504 CCACTACACCAAGCACGTCT 59.966 55.000 0.00 0.00 0.00 4.18
44 45 0.249741 ACCACTACACCAAGCACGTC 60.250 55.000 0.00 0.00 0.00 4.34
45 46 0.179468 AACCACTACACCAAGCACGT 59.821 50.000 0.00 0.00 0.00 4.49
46 47 0.586319 CAACCACTACACCAAGCACG 59.414 55.000 0.00 0.00 0.00 5.34
47 48 0.951558 CCAACCACTACACCAAGCAC 59.048 55.000 0.00 0.00 0.00 4.40
48 49 0.821711 GCCAACCACTACACCAAGCA 60.822 55.000 0.00 0.00 0.00 3.91
49 50 0.821711 TGCCAACCACTACACCAAGC 60.822 55.000 0.00 0.00 0.00 4.01
50 51 0.951558 GTGCCAACCACTACACCAAG 59.048 55.000 0.00 0.00 41.35 3.61
51 52 0.256177 TGTGCCAACCACTACACCAA 59.744 50.000 0.00 0.00 44.92 3.67
52 53 0.179032 CTGTGCCAACCACTACACCA 60.179 55.000 0.00 0.00 44.92 4.17
53 54 0.889186 CCTGTGCCAACCACTACACC 60.889 60.000 0.00 0.00 44.92 4.16
54 55 1.515521 GCCTGTGCCAACCACTACAC 61.516 60.000 0.00 0.00 44.92 2.90
55 56 1.228124 GCCTGTGCCAACCACTACA 60.228 57.895 0.00 0.00 44.92 2.74
56 57 3.668386 GCCTGTGCCAACCACTAC 58.332 61.111 0.00 0.00 44.92 2.73
68 69 1.608336 ATGCAAGCACATGGCCTGT 60.608 52.632 3.32 2.75 46.50 4.00
69 70 1.153647 CATGCAAGCACATGGCCTG 60.154 57.895 3.32 2.01 46.50 4.85
70 71 3.294750 CATGCAAGCACATGGCCT 58.705 55.556 3.32 0.00 46.50 5.19
74 75 0.869880 CGATGCCATGCAAGCACATG 60.870 55.000 16.13 6.34 44.40 3.21
75 76 1.435925 CGATGCCATGCAAGCACAT 59.564 52.632 16.13 6.19 44.40 3.21
76 77 2.879168 CGATGCCATGCAAGCACA 59.121 55.556 16.13 1.26 44.40 4.57
77 78 2.581409 GCGATGCCATGCAAGCAC 60.581 61.111 16.13 9.80 44.40 4.40
78 79 4.182315 CGCGATGCCATGCAAGCA 62.182 61.111 16.14 16.14 43.62 3.91
79 80 3.802008 CTCGCGATGCCATGCAAGC 62.802 63.158 10.36 5.18 43.62 4.01
80 81 1.985447 AACTCGCGATGCCATGCAAG 61.985 55.000 10.36 0.00 43.62 4.01
81 82 1.980951 GAACTCGCGATGCCATGCAA 61.981 55.000 10.36 0.00 43.62 4.08
82 83 2.436469 AACTCGCGATGCCATGCA 60.436 55.556 10.36 0.00 44.86 3.96
83 84 2.325857 GAACTCGCGATGCCATGC 59.674 61.111 10.36 0.00 0.00 4.06
84 85 1.815212 CTCGAACTCGCGATGCCATG 61.815 60.000 10.36 0.00 39.85 3.66
85 86 1.589993 CTCGAACTCGCGATGCCAT 60.590 57.895 10.36 0.00 39.85 4.40
86 87 2.202610 CTCGAACTCGCGATGCCA 60.203 61.111 10.36 0.00 39.85 4.92
87 88 3.621394 GCTCGAACTCGCGATGCC 61.621 66.667 10.36 0.00 39.85 4.40
88 89 3.621394 GGCTCGAACTCGCGATGC 61.621 66.667 10.36 7.49 39.85 3.91
89 90 2.956964 GGGCTCGAACTCGCGATG 60.957 66.667 10.36 6.65 39.85 3.84
90 91 4.208686 GGGGCTCGAACTCGCGAT 62.209 66.667 10.36 0.00 39.85 4.58
92 93 4.735132 TTGGGGCTCGAACTCGCG 62.735 66.667 0.00 0.00 39.60 5.87
93 94 2.815647 CTTGGGGCTCGAACTCGC 60.816 66.667 0.00 0.00 39.60 5.03
94 95 2.815647 GCTTGGGGCTCGAACTCG 60.816 66.667 0.00 0.00 41.45 4.18
103 104 1.376295 CAAAATGGCAGCTTGGGGC 60.376 57.895 0.00 0.00 42.19 5.80
104 105 0.397564 AACAAAATGGCAGCTTGGGG 59.602 50.000 13.88 0.00 0.00 4.96
105 106 2.145536 GAAACAAAATGGCAGCTTGGG 58.854 47.619 13.88 1.05 0.00 4.12
106 107 3.062042 GAGAAACAAAATGGCAGCTTGG 58.938 45.455 13.88 1.47 0.00 3.61
107 108 3.719924 TGAGAAACAAAATGGCAGCTTG 58.280 40.909 9.18 9.18 0.00 4.01
108 109 4.405116 TTGAGAAACAAAATGGCAGCTT 57.595 36.364 0.00 0.00 35.39 3.74
109 110 4.612264 ATTGAGAAACAAAATGGCAGCT 57.388 36.364 0.00 0.00 42.03 4.24
110 111 4.992951 AGAATTGAGAAACAAAATGGCAGC 59.007 37.500 0.00 0.00 42.03 5.25
111 112 7.816031 ACATAGAATTGAGAAACAAAATGGCAG 59.184 33.333 0.00 0.00 42.03 4.85
112 113 7.669427 ACATAGAATTGAGAAACAAAATGGCA 58.331 30.769 0.00 0.00 42.03 4.92
113 114 7.814107 TGACATAGAATTGAGAAACAAAATGGC 59.186 33.333 0.00 0.00 42.03 4.40
114 115 9.695526 TTGACATAGAATTGAGAAACAAAATGG 57.304 29.630 0.00 0.00 42.03 3.16
116 117 9.415544 GCTTGACATAGAATTGAGAAACAAAAT 57.584 29.630 0.00 0.00 42.03 1.82
117 118 7.591057 CGCTTGACATAGAATTGAGAAACAAAA 59.409 33.333 0.00 0.00 42.03 2.44
118 119 7.077605 CGCTTGACATAGAATTGAGAAACAAA 58.922 34.615 0.00 0.00 42.03 2.83
119 120 6.204688 ACGCTTGACATAGAATTGAGAAACAA 59.795 34.615 0.00 0.00 42.95 2.83
120 121 5.700832 ACGCTTGACATAGAATTGAGAAACA 59.299 36.000 0.00 0.00 0.00 2.83
121 122 6.017933 CACGCTTGACATAGAATTGAGAAAC 58.982 40.000 0.00 0.00 0.00 2.78
122 123 5.931724 TCACGCTTGACATAGAATTGAGAAA 59.068 36.000 0.00 0.00 0.00 2.52
123 124 5.478407 TCACGCTTGACATAGAATTGAGAA 58.522 37.500 0.00 0.00 0.00 2.87
124 125 5.072040 TCACGCTTGACATAGAATTGAGA 57.928 39.130 0.00 0.00 0.00 3.27
149 150 2.621055 AGAACTAAAAATGTGCCGTGCA 59.379 40.909 0.00 0.00 35.60 4.57
150 151 3.234386 GAGAACTAAAAATGTGCCGTGC 58.766 45.455 0.00 0.00 0.00 5.34
151 152 4.481930 TGAGAACTAAAAATGTGCCGTG 57.518 40.909 0.00 0.00 0.00 4.94
152 153 5.705609 AATGAGAACTAAAAATGTGCCGT 57.294 34.783 0.00 0.00 0.00 5.68
153 154 6.088085 GTGAAATGAGAACTAAAAATGTGCCG 59.912 38.462 0.00 0.00 0.00 5.69
154 155 7.115378 CAGTGAAATGAGAACTAAAAATGTGCC 59.885 37.037 0.00 0.00 0.00 5.01
155 156 7.649306 ACAGTGAAATGAGAACTAAAAATGTGC 59.351 33.333 0.00 0.00 0.00 4.57
156 157 9.173939 GACAGTGAAATGAGAACTAAAAATGTG 57.826 33.333 0.00 0.00 0.00 3.21
157 158 8.902806 TGACAGTGAAATGAGAACTAAAAATGT 58.097 29.630 0.00 0.00 0.00 2.71
158 159 9.734620 TTGACAGTGAAATGAGAACTAAAAATG 57.265 29.630 0.00 0.00 0.00 2.32
159 160 9.956720 CTTGACAGTGAAATGAGAACTAAAAAT 57.043 29.630 0.00 0.00 0.00 1.82
160 161 7.915397 GCTTGACAGTGAAATGAGAACTAAAAA 59.085 33.333 0.00 0.00 0.00 1.94
161 162 7.066887 TGCTTGACAGTGAAATGAGAACTAAAA 59.933 33.333 0.00 0.00 0.00 1.52
162 163 6.542005 TGCTTGACAGTGAAATGAGAACTAAA 59.458 34.615 0.00 0.00 0.00 1.85
163 164 6.054941 TGCTTGACAGTGAAATGAGAACTAA 58.945 36.000 0.00 0.00 0.00 2.24
164 165 5.610398 TGCTTGACAGTGAAATGAGAACTA 58.390 37.500 0.00 0.00 0.00 2.24
165 166 4.454678 TGCTTGACAGTGAAATGAGAACT 58.545 39.130 0.00 0.00 0.00 3.01
166 167 4.320057 CCTGCTTGACAGTGAAATGAGAAC 60.320 45.833 0.00 0.00 45.68 3.01
167 168 3.817084 CCTGCTTGACAGTGAAATGAGAA 59.183 43.478 0.00 0.00 45.68 2.87
168 169 3.071457 TCCTGCTTGACAGTGAAATGAGA 59.929 43.478 0.00 0.00 45.68 3.27
169 170 3.188048 GTCCTGCTTGACAGTGAAATGAG 59.812 47.826 0.00 0.00 45.68 2.90
170 171 3.141398 GTCCTGCTTGACAGTGAAATGA 58.859 45.455 0.00 0.00 45.68 2.57
171 172 2.227388 GGTCCTGCTTGACAGTGAAATG 59.773 50.000 0.00 0.00 45.68 2.32
172 173 2.508526 GGTCCTGCTTGACAGTGAAAT 58.491 47.619 0.00 0.00 45.68 2.17
173 174 1.476833 GGGTCCTGCTTGACAGTGAAA 60.477 52.381 0.00 0.00 45.68 2.69
174 175 0.108585 GGGTCCTGCTTGACAGTGAA 59.891 55.000 0.00 0.00 45.68 3.18
175 176 1.053835 TGGGTCCTGCTTGACAGTGA 61.054 55.000 0.00 0.00 45.68 3.41
176 177 0.886490 GTGGGTCCTGCTTGACAGTG 60.886 60.000 8.18 0.00 45.68 3.66
177 178 1.344953 TGTGGGTCCTGCTTGACAGT 61.345 55.000 8.18 0.00 45.68 3.55
178 179 0.037303 ATGTGGGTCCTGCTTGACAG 59.963 55.000 8.18 0.00 46.77 3.51
179 180 0.250858 CATGTGGGTCCTGCTTGACA 60.251 55.000 8.18 0.00 36.97 3.58
180 181 0.250901 ACATGTGGGTCCTGCTTGAC 60.251 55.000 0.00 0.00 34.42 3.18
181 182 0.250858 CACATGTGGGTCCTGCTTGA 60.251 55.000 18.51 0.00 0.00 3.02
182 183 1.870055 GCACATGTGGGTCCTGCTTG 61.870 60.000 26.55 0.00 0.00 4.01
183 184 1.604593 GCACATGTGGGTCCTGCTT 60.605 57.895 26.55 0.00 0.00 3.91
184 185 2.034687 GCACATGTGGGTCCTGCT 59.965 61.111 26.55 0.00 0.00 4.24
185 186 2.034687 AGCACATGTGGGTCCTGC 59.965 61.111 26.55 10.87 0.00 4.85
186 187 0.034767 ATCAGCACATGTGGGTCCTG 60.035 55.000 26.55 22.48 0.00 3.86
187 188 1.583556 TATCAGCACATGTGGGTCCT 58.416 50.000 26.55 12.49 0.00 3.85
188 189 2.292267 CTTATCAGCACATGTGGGTCC 58.708 52.381 26.55 10.33 0.00 4.46
189 190 2.292267 CCTTATCAGCACATGTGGGTC 58.708 52.381 26.55 10.69 0.00 4.46
190 191 1.064463 CCCTTATCAGCACATGTGGGT 60.064 52.381 26.55 10.33 0.00 4.51
191 192 1.683943 CCCTTATCAGCACATGTGGG 58.316 55.000 26.55 16.46 0.00 4.61
192 193 1.683943 CCCCTTATCAGCACATGTGG 58.316 55.000 26.55 11.60 0.00 4.17
193 194 1.683943 CCCCCTTATCAGCACATGTG 58.316 55.000 21.83 21.83 0.00 3.21
194 195 0.106519 GCCCCCTTATCAGCACATGT 60.107 55.000 0.00 0.00 0.00 3.21
195 196 0.184451 AGCCCCCTTATCAGCACATG 59.816 55.000 0.00 0.00 0.00 3.21
196 197 0.929244 AAGCCCCCTTATCAGCACAT 59.071 50.000 0.00 0.00 0.00 3.21
197 198 0.255890 GAAGCCCCCTTATCAGCACA 59.744 55.000 0.00 0.00 0.00 4.57
198 199 0.548510 AGAAGCCCCCTTATCAGCAC 59.451 55.000 0.00 0.00 0.00 4.40
199 200 0.548031 CAGAAGCCCCCTTATCAGCA 59.452 55.000 0.00 0.00 0.00 4.41
200 201 0.548510 ACAGAAGCCCCCTTATCAGC 59.451 55.000 0.00 0.00 0.00 4.26
201 202 1.748591 GCACAGAAGCCCCCTTATCAG 60.749 57.143 0.00 0.00 0.00 2.90
202 203 0.255890 GCACAGAAGCCCCCTTATCA 59.744 55.000 0.00 0.00 0.00 2.15
203 204 0.255890 TGCACAGAAGCCCCCTTATC 59.744 55.000 0.00 0.00 0.00 1.75
204 205 0.704076 TTGCACAGAAGCCCCCTTAT 59.296 50.000 0.00 0.00 0.00 1.73
205 206 0.704076 ATTGCACAGAAGCCCCCTTA 59.296 50.000 0.00 0.00 0.00 2.69
206 207 0.178924 AATTGCACAGAAGCCCCCTT 60.179 50.000 0.00 0.00 0.00 3.95
207 208 0.704076 TAATTGCACAGAAGCCCCCT 59.296 50.000 0.00 0.00 0.00 4.79
208 209 1.555967 TTAATTGCACAGAAGCCCCC 58.444 50.000 0.00 0.00 0.00 5.40
209 210 3.893326 ATTTAATTGCACAGAAGCCCC 57.107 42.857 0.00 0.00 0.00 5.80
210 211 5.323371 TGTATTTAATTGCACAGAAGCCC 57.677 39.130 0.00 0.00 0.00 5.19
211 212 6.183359 CGTTTGTATTTAATTGCACAGAAGCC 60.183 38.462 0.00 0.00 0.00 4.35
212 213 6.362283 ACGTTTGTATTTAATTGCACAGAAGC 59.638 34.615 0.00 0.00 0.00 3.86
213 214 7.148983 CCACGTTTGTATTTAATTGCACAGAAG 60.149 37.037 0.00 0.00 0.00 2.85
214 215 6.638873 CCACGTTTGTATTTAATTGCACAGAA 59.361 34.615 0.00 0.00 0.00 3.02
215 216 6.146216 CCACGTTTGTATTTAATTGCACAGA 58.854 36.000 0.00 0.00 0.00 3.41
216 217 5.344665 CCCACGTTTGTATTTAATTGCACAG 59.655 40.000 0.00 0.00 0.00 3.66
217 218 5.223382 CCCACGTTTGTATTTAATTGCACA 58.777 37.500 0.00 0.00 0.00 4.57
218 219 4.623595 CCCCACGTTTGTATTTAATTGCAC 59.376 41.667 0.00 0.00 0.00 4.57
219 220 4.281182 ACCCCACGTTTGTATTTAATTGCA 59.719 37.500 0.00 0.00 0.00 4.08
220 221 4.623595 CACCCCACGTTTGTATTTAATTGC 59.376 41.667 0.00 0.00 0.00 3.56
221 222 5.774630 ACACCCCACGTTTGTATTTAATTG 58.225 37.500 0.00 0.00 0.00 2.32
222 223 6.408107 AACACCCCACGTTTGTATTTAATT 57.592 33.333 0.00 0.00 0.00 1.40
223 224 6.265876 AGAAACACCCCACGTTTGTATTTAAT 59.734 34.615 0.00 0.00 36.72 1.40
224 225 5.593502 AGAAACACCCCACGTTTGTATTTAA 59.406 36.000 0.00 0.00 36.72 1.52
225 226 5.008811 CAGAAACACCCCACGTTTGTATTTA 59.991 40.000 0.00 0.00 36.72 1.40
226 227 3.955551 AGAAACACCCCACGTTTGTATTT 59.044 39.130 0.00 0.00 36.72 1.40
227 228 3.316868 CAGAAACACCCCACGTTTGTATT 59.683 43.478 0.00 0.00 36.72 1.89
228 229 2.882137 CAGAAACACCCCACGTTTGTAT 59.118 45.455 0.00 0.00 36.72 2.29
229 230 2.290464 CAGAAACACCCCACGTTTGTA 58.710 47.619 0.00 0.00 36.72 2.41
230 231 1.099689 CAGAAACACCCCACGTTTGT 58.900 50.000 0.00 0.00 36.72 2.83
231 232 0.248866 GCAGAAACACCCCACGTTTG 60.249 55.000 0.00 0.00 36.72 2.93
232 233 0.681564 TGCAGAAACACCCCACGTTT 60.682 50.000 0.00 0.00 39.23 3.60
233 234 1.077357 TGCAGAAACACCCCACGTT 60.077 52.632 0.00 0.00 0.00 3.99
234 235 1.822186 GTGCAGAAACACCCCACGT 60.822 57.895 0.00 0.00 34.35 4.49
235 236 1.380403 TTGTGCAGAAACACCCCACG 61.380 55.000 0.00 0.00 39.93 4.94
236 237 0.820871 TTTGTGCAGAAACACCCCAC 59.179 50.000 4.66 0.00 39.93 4.61
237 238 1.411977 CATTTGTGCAGAAACACCCCA 59.588 47.619 11.68 0.00 39.93 4.96
238 239 1.270252 CCATTTGTGCAGAAACACCCC 60.270 52.381 11.68 0.00 39.93 4.95
239 240 1.412343 ACCATTTGTGCAGAAACACCC 59.588 47.619 11.68 0.00 39.93 4.61
240 241 2.888834 ACCATTTGTGCAGAAACACC 57.111 45.000 11.68 0.00 39.93 4.16
241 242 3.123050 GGAACCATTTGTGCAGAAACAC 58.877 45.455 11.68 2.01 41.10 3.32
242 243 2.223688 CGGAACCATTTGTGCAGAAACA 60.224 45.455 11.68 0.00 0.00 2.83
243 244 2.393764 CGGAACCATTTGTGCAGAAAC 58.606 47.619 11.68 0.00 0.00 2.78
244 245 1.339610 CCGGAACCATTTGTGCAGAAA 59.660 47.619 11.84 11.84 0.00 2.52
245 246 0.958091 CCGGAACCATTTGTGCAGAA 59.042 50.000 0.00 0.00 0.00 3.02
246 247 0.179004 ACCGGAACCATTTGTGCAGA 60.179 50.000 9.46 0.00 0.00 4.26
247 248 0.240945 GACCGGAACCATTTGTGCAG 59.759 55.000 9.46 0.00 0.00 4.41
248 249 0.466372 TGACCGGAACCATTTGTGCA 60.466 50.000 9.46 0.00 0.00 4.57
249 250 0.671251 TTGACCGGAACCATTTGTGC 59.329 50.000 9.46 0.00 0.00 4.57
250 251 2.556189 TCATTGACCGGAACCATTTGTG 59.444 45.455 9.46 1.13 0.00 3.33
251 252 2.556622 GTCATTGACCGGAACCATTTGT 59.443 45.455 9.46 0.00 0.00 2.83
252 253 2.556189 TGTCATTGACCGGAACCATTTG 59.444 45.455 9.46 4.66 0.00 2.32
253 254 2.819608 CTGTCATTGACCGGAACCATTT 59.180 45.455 9.46 0.00 0.00 2.32
254 255 2.224769 ACTGTCATTGACCGGAACCATT 60.225 45.455 9.46 0.00 0.00 3.16
255 256 1.351017 ACTGTCATTGACCGGAACCAT 59.649 47.619 9.46 0.00 0.00 3.55
256 257 0.762418 ACTGTCATTGACCGGAACCA 59.238 50.000 9.46 0.00 0.00 3.67
257 258 1.156736 CACTGTCATTGACCGGAACC 58.843 55.000 9.46 0.00 0.00 3.62
258 259 1.156736 CCACTGTCATTGACCGGAAC 58.843 55.000 9.46 1.77 0.00 3.62
259 260 1.052617 TCCACTGTCATTGACCGGAA 58.947 50.000 9.46 0.00 0.00 4.30
260 261 0.320374 GTCCACTGTCATTGACCGGA 59.680 55.000 9.46 13.45 0.00 5.14
261 262 0.673644 GGTCCACTGTCATTGACCGG 60.674 60.000 14.05 11.52 38.07 5.28
262 263 2.840974 GGTCCACTGTCATTGACCG 58.159 57.895 14.05 10.26 38.07 4.79
263 264 2.496899 ATGGTCCACTGTCATTGACC 57.503 50.000 14.05 0.00 45.99 4.02
264 265 2.939103 GCTATGGTCCACTGTCATTGAC 59.061 50.000 9.93 9.93 0.00 3.18
265 266 2.092968 GGCTATGGTCCACTGTCATTGA 60.093 50.000 0.00 0.00 0.00 2.57
266 267 2.292267 GGCTATGGTCCACTGTCATTG 58.708 52.381 0.00 0.00 0.00 2.82
267 268 1.915489 TGGCTATGGTCCACTGTCATT 59.085 47.619 0.00 0.00 0.00 2.57
268 269 1.583556 TGGCTATGGTCCACTGTCAT 58.416 50.000 0.00 0.00 0.00 3.06
269 270 1.210234 CATGGCTATGGTCCACTGTCA 59.790 52.381 1.33 0.00 36.26 3.58
270 271 1.210478 ACATGGCTATGGTCCACTGTC 59.790 52.381 15.11 0.00 38.66 3.51
271 272 1.289160 ACATGGCTATGGTCCACTGT 58.711 50.000 15.11 0.00 38.66 3.55
272 273 2.019249 CAACATGGCTATGGTCCACTG 58.981 52.381 15.11 0.00 38.66 3.66
273 274 1.064463 CCAACATGGCTATGGTCCACT 60.064 52.381 15.11 0.00 38.66 4.00
274 275 1.392589 CCAACATGGCTATGGTCCAC 58.607 55.000 15.11 0.00 38.66 4.02
275 276 3.901087 CCAACATGGCTATGGTCCA 57.099 52.632 15.11 0.00 38.66 4.02
291 292 2.265182 GCGGTTACTTGGCAAGCCA 61.265 57.895 26.45 10.24 45.63 4.75
292 293 2.200170 CTGCGGTTACTTGGCAAGCC 62.200 60.000 26.45 18.07 36.06 4.35
293 294 1.210155 CTGCGGTTACTTGGCAAGC 59.790 57.895 26.45 13.17 36.06 4.01
294 295 0.605319 TCCTGCGGTTACTTGGCAAG 60.605 55.000 25.06 25.06 36.06 4.01
295 296 0.037590 ATCCTGCGGTTACTTGGCAA 59.962 50.000 0.00 0.00 36.06 4.52
296 297 0.906066 TATCCTGCGGTTACTTGGCA 59.094 50.000 0.00 0.00 35.07 4.92
297 298 1.296727 GTATCCTGCGGTTACTTGGC 58.703 55.000 0.00 0.00 0.00 4.52
298 299 1.134907 ACGTATCCTGCGGTTACTTGG 60.135 52.381 11.44 0.00 0.00 3.61
299 300 2.190981 GACGTATCCTGCGGTTACTTG 58.809 52.381 0.00 3.51 0.00 3.16
300 301 1.135721 GGACGTATCCTGCGGTTACTT 59.864 52.381 0.00 5.10 42.45 2.24
301 302 0.743097 GGACGTATCCTGCGGTTACT 59.257 55.000 0.00 3.00 42.45 2.24
302 303 0.457035 TGGACGTATCCTGCGGTTAC 59.543 55.000 0.00 0.00 46.43 2.50
303 304 0.742505 CTGGACGTATCCTGCGGTTA 59.257 55.000 0.00 0.00 46.43 2.85
304 305 0.968901 TCTGGACGTATCCTGCGGTT 60.969 55.000 0.00 0.00 46.43 4.44
305 306 0.755698 ATCTGGACGTATCCTGCGGT 60.756 55.000 0.00 0.00 46.43 5.68
306 307 1.068472 GTATCTGGACGTATCCTGCGG 60.068 57.143 0.00 0.00 46.43 5.69
307 308 1.399855 CGTATCTGGACGTATCCTGCG 60.400 57.143 0.00 0.00 46.43 5.18
308 309 1.878088 TCGTATCTGGACGTATCCTGC 59.122 52.381 0.00 0.00 46.43 4.85
309 310 4.768130 ATTCGTATCTGGACGTATCCTG 57.232 45.455 0.00 0.00 46.43 3.86
310 311 6.489361 ACTTTATTCGTATCTGGACGTATCCT 59.511 38.462 0.00 0.00 46.43 3.24
311 312 6.581542 CACTTTATTCGTATCTGGACGTATCC 59.418 42.308 0.00 0.00 46.48 2.59
312 313 7.323177 GTCACTTTATTCGTATCTGGACGTATC 59.677 40.741 0.00 0.00 43.39 2.24
313 314 7.137426 GTCACTTTATTCGTATCTGGACGTAT 58.863 38.462 0.00 0.00 43.39 3.06
314 315 6.458751 GGTCACTTTATTCGTATCTGGACGTA 60.459 42.308 0.00 0.00 43.39 3.57
315 316 5.338365 GTCACTTTATTCGTATCTGGACGT 58.662 41.667 0.00 0.00 43.39 4.34
316 317 4.738740 GGTCACTTTATTCGTATCTGGACG 59.261 45.833 0.00 0.00 44.29 4.79
317 318 4.738740 CGGTCACTTTATTCGTATCTGGAC 59.261 45.833 0.00 0.00 0.00 4.02
318 319 4.400251 ACGGTCACTTTATTCGTATCTGGA 59.600 41.667 0.00 0.00 32.03 3.86
319 320 4.679662 ACGGTCACTTTATTCGTATCTGG 58.320 43.478 0.00 0.00 32.03 3.86
320 321 7.925703 AATACGGTCACTTTATTCGTATCTG 57.074 36.000 7.06 0.00 43.36 2.90
321 322 7.042925 GCAAATACGGTCACTTTATTCGTATCT 60.043 37.037 7.06 0.00 43.36 1.98
322 323 7.061634 GCAAATACGGTCACTTTATTCGTATC 58.938 38.462 7.06 0.00 43.36 2.24
323 324 6.535865 TGCAAATACGGTCACTTTATTCGTAT 59.464 34.615 0.00 0.00 45.19 3.06
324 325 5.868258 TGCAAATACGGTCACTTTATTCGTA 59.132 36.000 0.00 0.00 39.95 3.43
325 326 4.691685 TGCAAATACGGTCACTTTATTCGT 59.308 37.500 0.00 0.00 37.78 3.85
326 327 5.019498 GTGCAAATACGGTCACTTTATTCG 58.981 41.667 0.00 0.00 0.00 3.34
327 328 5.019498 CGTGCAAATACGGTCACTTTATTC 58.981 41.667 0.00 0.00 40.22 1.75
328 329 4.691685 TCGTGCAAATACGGTCACTTTATT 59.308 37.500 0.00 0.00 43.85 1.40
329 330 4.247258 TCGTGCAAATACGGTCACTTTAT 58.753 39.130 0.00 0.00 43.85 1.40
330 331 3.651206 TCGTGCAAATACGGTCACTTTA 58.349 40.909 0.00 0.00 43.85 1.85
331 332 2.478894 CTCGTGCAAATACGGTCACTTT 59.521 45.455 0.00 0.00 43.85 2.66
332 333 2.066262 CTCGTGCAAATACGGTCACTT 58.934 47.619 0.00 0.00 43.85 3.16
333 334 1.271379 TCTCGTGCAAATACGGTCACT 59.729 47.619 0.00 0.00 43.85 3.41
334 335 1.705256 TCTCGTGCAAATACGGTCAC 58.295 50.000 0.00 0.00 43.85 3.67
335 336 2.442212 TTCTCGTGCAAATACGGTCA 57.558 45.000 0.00 0.00 43.85 4.02
336 337 2.536928 GCATTCTCGTGCAAATACGGTC 60.537 50.000 0.00 0.00 44.43 4.79
337 338 1.396996 GCATTCTCGTGCAAATACGGT 59.603 47.619 0.00 0.00 44.43 4.83
338 339 2.091152 GCATTCTCGTGCAAATACGG 57.909 50.000 0.00 0.00 44.43 4.02
346 347 4.554973 GTCATTTAACTTGCATTCTCGTGC 59.445 41.667 0.00 0.00 45.25 5.34
347 348 5.088739 GGTCATTTAACTTGCATTCTCGTG 58.911 41.667 0.00 0.00 0.00 4.35
348 349 4.759693 TGGTCATTTAACTTGCATTCTCGT 59.240 37.500 0.00 0.00 0.00 4.18
349 350 5.088739 GTGGTCATTTAACTTGCATTCTCG 58.911 41.667 0.00 0.00 0.00 4.04
350 351 5.858581 GTGTGGTCATTTAACTTGCATTCTC 59.141 40.000 0.00 0.00 0.00 2.87
351 352 5.301551 TGTGTGGTCATTTAACTTGCATTCT 59.698 36.000 0.00 0.00 0.00 2.40
352 353 5.527951 TGTGTGGTCATTTAACTTGCATTC 58.472 37.500 0.00 0.00 0.00 2.67
353 354 5.528043 TGTGTGGTCATTTAACTTGCATT 57.472 34.783 0.00 0.00 0.00 3.56
354 355 5.336690 GGATGTGTGGTCATTTAACTTGCAT 60.337 40.000 0.00 0.00 0.00 3.96
355 356 4.022416 GGATGTGTGGTCATTTAACTTGCA 60.022 41.667 0.00 0.00 0.00 4.08
356 357 4.485163 GGATGTGTGGTCATTTAACTTGC 58.515 43.478 0.00 0.00 0.00 4.01
357 358 4.215399 ACGGATGTGTGGTCATTTAACTTG 59.785 41.667 0.00 0.00 0.00 3.16
358 359 4.394729 ACGGATGTGTGGTCATTTAACTT 58.605 39.130 0.00 0.00 0.00 2.66
359 360 4.015872 ACGGATGTGTGGTCATTTAACT 57.984 40.909 0.00 0.00 0.00 2.24
360 361 6.431198 AATACGGATGTGTGGTCATTTAAC 57.569 37.500 0.00 0.00 0.00 2.01
361 362 7.455641 AAAATACGGATGTGTGGTCATTTAA 57.544 32.000 0.00 0.00 0.00 1.52
362 363 7.455641 AAAAATACGGATGTGTGGTCATTTA 57.544 32.000 0.00 0.00 0.00 1.40
363 364 5.975693 AAAATACGGATGTGTGGTCATTT 57.024 34.783 0.00 0.00 0.00 2.32
364 365 5.975693 AAAAATACGGATGTGTGGTCATT 57.024 34.783 0.00 0.00 0.00 2.57
365 366 7.175990 ACTTTAAAAATACGGATGTGTGGTCAT 59.824 33.333 0.00 0.00 0.00 3.06
366 367 6.487331 ACTTTAAAAATACGGATGTGTGGTCA 59.513 34.615 0.00 0.00 0.00 4.02
367 368 6.905578 ACTTTAAAAATACGGATGTGTGGTC 58.094 36.000 0.00 0.00 0.00 4.02
368 369 6.887626 ACTTTAAAAATACGGATGTGTGGT 57.112 33.333 0.00 0.00 0.00 4.16
369 370 7.590279 AGAACTTTAAAAATACGGATGTGTGG 58.410 34.615 0.00 0.00 0.00 4.17
374 375 9.931210 GGTGATAGAACTTTAAAAATACGGATG 57.069 33.333 0.00 0.00 0.00 3.51
375 376 9.675464 TGGTGATAGAACTTTAAAAATACGGAT 57.325 29.630 0.00 0.00 0.00 4.18
376 377 9.504708 TTGGTGATAGAACTTTAAAAATACGGA 57.495 29.630 0.00 0.00 0.00 4.69
384 385 9.179909 TGTTCAGTTTGGTGATAGAACTTTAAA 57.820 29.630 0.00 0.00 37.03 1.52
385 386 8.740123 TGTTCAGTTTGGTGATAGAACTTTAA 57.260 30.769 0.00 0.00 37.03 1.52
386 387 8.918202 ATGTTCAGTTTGGTGATAGAACTTTA 57.082 30.769 0.00 0.00 37.03 1.85
387 388 7.040409 GGATGTTCAGTTTGGTGATAGAACTTT 60.040 37.037 0.00 0.00 37.03 2.66
388 389 6.431234 GGATGTTCAGTTTGGTGATAGAACTT 59.569 38.462 0.00 0.00 37.03 2.66
389 390 5.940470 GGATGTTCAGTTTGGTGATAGAACT 59.060 40.000 0.00 0.00 37.03 3.01
390 391 5.705441 TGGATGTTCAGTTTGGTGATAGAAC 59.295 40.000 0.00 0.00 36.73 3.01
391 392 5.875224 TGGATGTTCAGTTTGGTGATAGAA 58.125 37.500 0.00 0.00 0.00 2.10
392 393 5.497464 TGGATGTTCAGTTTGGTGATAGA 57.503 39.130 0.00 0.00 0.00 1.98
393 394 5.473162 TGTTGGATGTTCAGTTTGGTGATAG 59.527 40.000 0.00 0.00 0.00 2.08
394 395 5.240623 GTGTTGGATGTTCAGTTTGGTGATA 59.759 40.000 0.00 0.00 0.00 2.15
395 396 4.037923 GTGTTGGATGTTCAGTTTGGTGAT 59.962 41.667 0.00 0.00 0.00 3.06
396 397 3.380004 GTGTTGGATGTTCAGTTTGGTGA 59.620 43.478 0.00 0.00 0.00 4.02
397 398 3.130164 TGTGTTGGATGTTCAGTTTGGTG 59.870 43.478 0.00 0.00 0.00 4.17
398 399 3.360867 TGTGTTGGATGTTCAGTTTGGT 58.639 40.909 0.00 0.00 0.00 3.67
399 400 4.111916 GTTGTGTTGGATGTTCAGTTTGG 58.888 43.478 0.00 0.00 0.00 3.28
400 401 4.997565 AGTTGTGTTGGATGTTCAGTTTG 58.002 39.130 0.00 0.00 0.00 2.93
401 402 5.418840 AGAAGTTGTGTTGGATGTTCAGTTT 59.581 36.000 0.00 0.00 0.00 2.66
402 403 4.949856 AGAAGTTGTGTTGGATGTTCAGTT 59.050 37.500 0.00 0.00 0.00 3.16
403 404 4.526970 AGAAGTTGTGTTGGATGTTCAGT 58.473 39.130 0.00 0.00 0.00 3.41
404 405 6.427853 TCATAGAAGTTGTGTTGGATGTTCAG 59.572 38.462 0.00 0.00 0.00 3.02
405 406 6.204688 GTCATAGAAGTTGTGTTGGATGTTCA 59.795 38.462 0.00 0.00 0.00 3.18
406 407 6.348540 GGTCATAGAAGTTGTGTTGGATGTTC 60.349 42.308 0.00 0.00 0.00 3.18
407 408 5.473504 GGTCATAGAAGTTGTGTTGGATGTT 59.526 40.000 0.00 0.00 0.00 2.71
408 409 5.003804 GGTCATAGAAGTTGTGTTGGATGT 58.996 41.667 0.00 0.00 0.00 3.06
409 410 5.122869 CAGGTCATAGAAGTTGTGTTGGATG 59.877 44.000 0.00 0.00 0.00 3.51
410 411 5.221925 ACAGGTCATAGAAGTTGTGTTGGAT 60.222 40.000 0.00 0.00 0.00 3.41
411 412 4.102524 ACAGGTCATAGAAGTTGTGTTGGA 59.897 41.667 0.00 0.00 0.00 3.53
412 413 4.214119 CACAGGTCATAGAAGTTGTGTTGG 59.786 45.833 0.00 0.00 33.21 3.77
413 414 4.214119 CCACAGGTCATAGAAGTTGTGTTG 59.786 45.833 2.31 0.00 35.39 3.33
414 415 4.141482 ACCACAGGTCATAGAAGTTGTGTT 60.141 41.667 2.31 0.00 35.39 3.32
415 416 3.391296 ACCACAGGTCATAGAAGTTGTGT 59.609 43.478 2.31 0.00 35.39 3.72
416 417 3.748048 CACCACAGGTCATAGAAGTTGTG 59.252 47.826 0.00 0.00 36.56 3.33
417 418 3.646162 TCACCACAGGTCATAGAAGTTGT 59.354 43.478 0.00 0.00 31.02 3.32
418 419 4.271696 TCACCACAGGTCATAGAAGTTG 57.728 45.455 0.00 0.00 31.02 3.16
419 420 6.814954 ATATCACCACAGGTCATAGAAGTT 57.185 37.500 0.00 0.00 31.02 2.66
420 421 6.814954 AATATCACCACAGGTCATAGAAGT 57.185 37.500 0.00 0.00 31.02 3.01
421 422 7.015682 AGGTAATATCACCACAGGTCATAGAAG 59.984 40.741 0.00 0.00 41.40 2.85
422 423 6.844388 AGGTAATATCACCACAGGTCATAGAA 59.156 38.462 0.00 0.00 41.40 2.10
423 424 6.382087 AGGTAATATCACCACAGGTCATAGA 58.618 40.000 0.00 0.00 41.40 1.98
424 425 6.267699 TGAGGTAATATCACCACAGGTCATAG 59.732 42.308 0.00 0.00 41.40 2.23
425 426 6.140377 TGAGGTAATATCACCACAGGTCATA 58.860 40.000 0.00 0.00 41.40 2.15
426 427 4.968719 TGAGGTAATATCACCACAGGTCAT 59.031 41.667 0.00 0.00 41.40 3.06
427 428 4.358214 TGAGGTAATATCACCACAGGTCA 58.642 43.478 0.00 0.00 41.40 4.02
428 429 5.552870 ATGAGGTAATATCACCACAGGTC 57.447 43.478 1.44 0.00 41.57 3.85
429 430 5.975988 AATGAGGTAATATCACCACAGGT 57.024 39.130 1.44 0.00 41.57 4.00
430 431 6.828273 TGAAAATGAGGTAATATCACCACAGG 59.172 38.462 1.44 0.00 41.57 4.00
431 432 7.864108 TGAAAATGAGGTAATATCACCACAG 57.136 36.000 1.44 0.00 41.57 3.66
432 433 9.337396 GTATGAAAATGAGGTAATATCACCACA 57.663 33.333 0.00 0.00 42.31 4.17
433 434 9.561069 AGTATGAAAATGAGGTAATATCACCAC 57.439 33.333 0.00 0.00 41.40 4.16
441 442 7.926555 CGAGTGGTAGTATGAAAATGAGGTAAT 59.073 37.037 0.00 0.00 0.00 1.89
442 443 7.262772 CGAGTGGTAGTATGAAAATGAGGTAA 58.737 38.462 0.00 0.00 0.00 2.85
443 444 6.682113 GCGAGTGGTAGTATGAAAATGAGGTA 60.682 42.308 0.00 0.00 0.00 3.08
444 445 5.661458 CGAGTGGTAGTATGAAAATGAGGT 58.339 41.667 0.00 0.00 0.00 3.85
445 446 4.508124 GCGAGTGGTAGTATGAAAATGAGG 59.492 45.833 0.00 0.00 0.00 3.86
446 447 4.207224 CGCGAGTGGTAGTATGAAAATGAG 59.793 45.833 0.00 0.00 0.00 2.90
447 448 4.109766 CGCGAGTGGTAGTATGAAAATGA 58.890 43.478 0.00 0.00 0.00 2.57
448 449 3.863424 ACGCGAGTGGTAGTATGAAAATG 59.137 43.478 15.93 0.00 46.97 2.32
475 476 1.533756 CCAACGAACAACCAACTGCAG 60.534 52.381 13.48 13.48 0.00 4.41
477 478 0.248866 CCCAACGAACAACCAACTGC 60.249 55.000 0.00 0.00 0.00 4.40
478 479 1.384525 TCCCAACGAACAACCAACTG 58.615 50.000 0.00 0.00 0.00 3.16
479 480 2.227194 GATCCCAACGAACAACCAACT 58.773 47.619 0.00 0.00 0.00 3.16
480 481 1.950909 TGATCCCAACGAACAACCAAC 59.049 47.619 0.00 0.00 0.00 3.77
481 482 2.350057 TGATCCCAACGAACAACCAA 57.650 45.000 0.00 0.00 0.00 3.67
483 484 2.711542 AGATGATCCCAACGAACAACC 58.288 47.619 0.00 0.00 0.00 3.77
484 485 4.330074 CAGTAGATGATCCCAACGAACAAC 59.670 45.833 0.00 0.00 0.00 3.32
485 486 4.503910 CAGTAGATGATCCCAACGAACAA 58.496 43.478 0.00 0.00 0.00 2.83
486 487 3.678806 GCAGTAGATGATCCCAACGAACA 60.679 47.826 0.00 0.00 0.00 3.18
487 488 2.866762 GCAGTAGATGATCCCAACGAAC 59.133 50.000 0.00 0.00 0.00 3.95
489 490 2.388735 AGCAGTAGATGATCCCAACGA 58.611 47.619 0.00 0.00 0.00 3.85
490 491 2.898729 AGCAGTAGATGATCCCAACG 57.101 50.000 0.00 0.00 0.00 4.10
491 492 4.946478 AGTAGCAGTAGATGATCCCAAC 57.054 45.455 0.00 0.00 0.00 3.77
492 493 5.706447 AGTAGTAGCAGTAGATGATCCCAA 58.294 41.667 0.00 0.00 0.00 4.12
493 494 5.326283 AGTAGTAGCAGTAGATGATCCCA 57.674 43.478 0.00 0.00 0.00 4.37
494 495 5.648960 GGTAGTAGTAGCAGTAGATGATCCC 59.351 48.000 1.82 0.00 0.00 3.85
495 496 5.648960 GGGTAGTAGTAGCAGTAGATGATCC 59.351 48.000 8.94 0.00 0.00 3.36
506 507 5.488203 CCTCTATCTAGGGGTAGTAGTAGCA 59.512 48.000 8.94 0.00 39.20 3.49
631 884 3.442273 CCTTTGGTATTTAGCGGCTTTGA 59.558 43.478 8.26 0.00 0.00 2.69
690 943 6.993786 TGAAAAAGGGTGAAAAATGTTTCC 57.006 33.333 5.90 0.00 42.20 3.13
696 949 5.912892 ACGACATGAAAAAGGGTGAAAAAT 58.087 33.333 0.00 0.00 0.00 1.82
772 1069 3.551635 TGTCTTCTCTTCTCTTCCCCT 57.448 47.619 0.00 0.00 0.00 4.79
781 1078 0.693049 TGGGGCCTTGTCTTCTCTTC 59.307 55.000 0.84 0.00 0.00 2.87
783 1080 0.402121 GTTGGGGCCTTGTCTTCTCT 59.598 55.000 0.84 0.00 0.00 3.10
785 1082 0.555769 TTGTTGGGGCCTTGTCTTCT 59.444 50.000 0.84 0.00 0.00 2.85
786 1083 1.273327 CATTGTTGGGGCCTTGTCTTC 59.727 52.381 0.84 0.00 0.00 2.87
787 1084 1.341080 CATTGTTGGGGCCTTGTCTT 58.659 50.000 0.84 0.00 0.00 3.01
788 1085 0.188342 ACATTGTTGGGGCCTTGTCT 59.812 50.000 0.84 0.00 0.00 3.41
789 1086 1.047801 AACATTGTTGGGGCCTTGTC 58.952 50.000 0.84 0.00 0.00 3.18
790 1087 0.758123 CAACATTGTTGGGGCCTTGT 59.242 50.000 19.66 0.00 0.00 3.16
791 1088 0.035176 CCAACATTGTTGGGGCCTTG 59.965 55.000 32.30 11.73 35.96 3.61
792 1089 0.105246 TCCAACATTGTTGGGGCCTT 60.105 50.000 36.30 0.00 39.96 4.35
1185 1537 4.845307 GGGGAGGGGGAGAAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
1186 1538 4.845307 GGGGGAGGGGGAGAAGGG 62.845 77.778 0.00 0.00 0.00 3.95
1188 1540 2.040359 GAGGGGGAGGGGGAGAAG 60.040 72.222 0.00 0.00 0.00 2.85
1237 1595 0.465705 TTCTATGGAGCCGAGCCTTG 59.534 55.000 0.00 0.00 0.00 3.61
1244 1605 6.867662 AAAGATTGTATTTCTATGGAGCCG 57.132 37.500 0.00 0.00 0.00 5.52
1290 1651 1.130561 CGAAGAAGATTTCCGTTGCCC 59.869 52.381 0.00 0.00 0.00 5.36
1311 1672 5.685728 CGAAGGAAATAAAAGAGGGGAGAT 58.314 41.667 0.00 0.00 0.00 2.75
1312 1673 4.625564 GCGAAGGAAATAAAAGAGGGGAGA 60.626 45.833 0.00 0.00 0.00 3.71
1313 1674 3.628032 GCGAAGGAAATAAAAGAGGGGAG 59.372 47.826 0.00 0.00 0.00 4.30
1314 1675 3.617284 GCGAAGGAAATAAAAGAGGGGA 58.383 45.455 0.00 0.00 0.00 4.81
1315 1676 2.688446 GGCGAAGGAAATAAAAGAGGGG 59.312 50.000 0.00 0.00 0.00 4.79
1316 1677 2.688446 GGGCGAAGGAAATAAAAGAGGG 59.312 50.000 0.00 0.00 0.00 4.30
1331 1692 2.282816 CCAACATGTGGGGGCGAA 60.283 61.111 11.95 0.00 44.64 4.70
1354 1715 1.187715 CGCCAAACAAACACGAACAG 58.812 50.000 0.00 0.00 0.00 3.16
1372 1733 0.458543 AAGCTAGTGACGTGCCATCG 60.459 55.000 0.00 0.00 0.00 3.84
1470 1833 0.786581 GCGTGAGGTATGATCATGCG 59.213 55.000 18.72 12.64 46.41 4.73
1564 1931 3.994392 GCAGCAACTTGTAGCAAGTACTA 59.006 43.478 13.91 0.00 32.19 1.82
1566 1933 2.548057 TGCAGCAACTTGTAGCAAGTAC 59.452 45.455 13.91 9.92 31.42 2.73
1576 1943 1.411394 CAAACGGATGCAGCAACTTG 58.589 50.000 3.51 0.00 0.00 3.16
1591 1958 1.203287 GGGAGAGCAGAAATGGCAAAC 59.797 52.381 0.00 0.00 0.00 2.93
1611 1980 1.819928 TGACCATGACGGACCATTTG 58.180 50.000 0.00 0.00 38.63 2.32
1769 2155 9.132521 CGCAAACAAGAAATCAAATTATCTTCT 57.867 29.630 0.00 0.00 30.01 2.85
1770 2156 8.915654 ACGCAAACAAGAAATCAAATTATCTTC 58.084 29.630 0.00 0.00 30.01 2.87
1771 2157 8.816640 ACGCAAACAAGAAATCAAATTATCTT 57.183 26.923 0.00 0.00 32.55 2.40
1772 2158 8.702438 CAACGCAAACAAGAAATCAAATTATCT 58.298 29.630 0.00 0.00 0.00 1.98
1773 2159 7.475256 GCAACGCAAACAAGAAATCAAATTATC 59.525 33.333 0.00 0.00 0.00 1.75
1774 2160 7.042187 TGCAACGCAAACAAGAAATCAAATTAT 60.042 29.630 0.00 0.00 34.76 1.28
2030 2437 2.827190 CAGGGAGCATGCACGCAT 60.827 61.111 28.50 14.33 37.08 4.73
2043 2450 0.321653 ACTACAAAGAAGGCGCAGGG 60.322 55.000 10.83 0.00 0.00 4.45
2049 2456 6.789262 TGATACGTACTACTACAAAGAAGGC 58.211 40.000 0.00 0.00 0.00 4.35
2058 2465 6.420008 CCTGCCATTTTGATACGTACTACTAC 59.580 42.308 0.00 0.00 0.00 2.73
2059 2466 6.509656 CCTGCCATTTTGATACGTACTACTA 58.490 40.000 0.00 0.00 0.00 1.82
2060 2467 5.357257 CCTGCCATTTTGATACGTACTACT 58.643 41.667 0.00 0.00 0.00 2.57
2061 2468 4.025145 GCCTGCCATTTTGATACGTACTAC 60.025 45.833 0.00 0.00 0.00 2.73
2062 2469 4.124238 GCCTGCCATTTTGATACGTACTA 58.876 43.478 0.00 0.00 0.00 1.82
2063 2470 2.943033 GCCTGCCATTTTGATACGTACT 59.057 45.455 0.00 0.00 0.00 2.73
2266 2684 0.178947 ATTAGAGGGAGCCGAGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
2273 2691 3.797559 AGGCAATAATTAGAGGGAGCC 57.202 47.619 0.00 0.00 41.08 4.70
2274 2692 5.491323 ACTAGGCAATAATTAGAGGGAGC 57.509 43.478 0.00 0.00 0.00 4.70
2275 2693 6.497259 TGGTACTAGGCAATAATTAGAGGGAG 59.503 42.308 0.00 0.00 0.00 4.30
2276 2694 6.387127 TGGTACTAGGCAATAATTAGAGGGA 58.613 40.000 0.00 0.00 0.00 4.20
2277 2695 6.681729 TGGTACTAGGCAATAATTAGAGGG 57.318 41.667 0.00 0.00 0.00 4.30
2295 2713 1.003118 TGAGCACTGGTGGAATGGTAC 59.997 52.381 2.84 0.00 0.00 3.34
2299 2720 2.422479 CTGAATGAGCACTGGTGGAATG 59.578 50.000 2.84 0.00 0.00 2.67
2300 2721 2.040813 ACTGAATGAGCACTGGTGGAAT 59.959 45.455 2.84 0.00 0.00 3.01
2301 2722 1.421268 ACTGAATGAGCACTGGTGGAA 59.579 47.619 2.84 0.00 0.00 3.53
2302 2723 1.002430 GACTGAATGAGCACTGGTGGA 59.998 52.381 2.84 0.00 0.00 4.02
2387 2826 2.789409 ACCAATGCCCACTACTCTTC 57.211 50.000 0.00 0.00 0.00 2.87
2388 2827 3.525800 AAACCAATGCCCACTACTCTT 57.474 42.857 0.00 0.00 0.00 2.85
2389 2828 3.157087 CAAAACCAATGCCCACTACTCT 58.843 45.455 0.00 0.00 0.00 3.24
2390 2829 2.231235 CCAAAACCAATGCCCACTACTC 59.769 50.000 0.00 0.00 0.00 2.59
2408 2847 1.452145 GGCGAGAAACTGGCAACCAA 61.452 55.000 7.88 0.00 36.94 3.67
2409 2848 1.896660 GGCGAGAAACTGGCAACCA 60.897 57.895 7.88 0.00 36.94 3.67
2410 2849 1.244019 ATGGCGAGAAACTGGCAACC 61.244 55.000 7.88 0.00 44.27 3.77
2411 2850 0.109597 CATGGCGAGAAACTGGCAAC 60.110 55.000 7.88 0.00 44.27 4.17
2424 2863 1.005867 ACAGCTTTTTGCCATGGCG 60.006 52.632 30.87 17.55 45.51 5.69
2579 3037 7.417496 ACGGAGTAAAAGTAGAAACATGAAC 57.583 36.000 0.00 0.00 41.94 3.18
2697 3159 0.827507 AAAAGGGAGCACGCATTGGT 60.828 50.000 0.36 0.00 39.21 3.67
2741 3203 0.893727 AAGCGGGGCAGTAGTTTTGG 60.894 55.000 0.00 0.00 0.00 3.28
2746 3208 4.410400 GGCAAGCGGGGCAGTAGT 62.410 66.667 0.00 0.00 0.00 2.73
2876 3345 7.771927 AGGACAGTTAGTAAAAGTGCTACTA 57.228 36.000 7.83 0.00 31.98 1.82
3001 3558 4.757657 GGTCCTGAGAAGAAAAGGAAGTTC 59.242 45.833 0.00 0.00 41.70 3.01
3012 3569 5.057149 CGAAAGAAAAAGGTCCTGAGAAGA 58.943 41.667 0.00 0.00 0.00 2.87
3077 3634 2.095263 GCGCATTTCAGCTTCCAACTAA 60.095 45.455 0.30 0.00 0.00 2.24
3080 3637 0.039256 TGCGCATTTCAGCTTCCAAC 60.039 50.000 5.66 0.00 0.00 3.77
3083 3640 0.733909 GGTTGCGCATTTCAGCTTCC 60.734 55.000 12.75 0.00 0.00 3.46
3107 3664 7.290248 AGAGGAATATTAAGCAGGCAGTACTAA 59.710 37.037 0.00 0.00 0.00 2.24
3132 3689 3.672808 ACCTGAAGATTGAAGCAGTGAG 58.327 45.455 0.00 0.00 0.00 3.51
3190 3747 1.078918 CTTCCTCTCGTGCATGCCA 60.079 57.895 16.68 0.00 0.00 4.92
3235 3792 2.713877 GTACCGGGTAAGGCAATGAAA 58.286 47.619 8.81 0.00 33.69 2.69
3255 3812 9.123709 GCAACTAAGATAAGATTCTCTCATACG 57.876 37.037 0.00 0.00 0.00 3.06
3332 3889 4.849926 CAGATTTTCAGATGTTGCGTTGAG 59.150 41.667 0.00 0.00 0.00 3.02
3337 3894 3.206034 TGCAGATTTTCAGATGTTGCG 57.794 42.857 0.00 0.00 0.00 4.85
3359 3917 1.612513 ACCTGTGGTGGTGCAAGAA 59.387 52.632 0.00 0.00 39.17 2.52
3383 3941 1.620739 GCAGCTCATCCAGAGTCCCA 61.621 60.000 0.00 0.00 46.47 4.37
3463 4021 1.399791 GATGCTGCTGCTACAAGGAAC 59.600 52.381 17.00 0.00 40.48 3.62
3472 4030 1.400846 CGAATTCTTGATGCTGCTGCT 59.599 47.619 17.00 2.26 40.48 4.24
3473 4031 1.399440 TCGAATTCTTGATGCTGCTGC 59.601 47.619 8.89 8.89 40.20 5.25
3474 4032 3.604085 CGATCGAATTCTTGATGCTGCTG 60.604 47.826 10.26 0.00 0.00 4.41
3486 4044 2.352960 AGCTTTTGAGGCGATCGAATTC 59.647 45.455 21.57 12.70 31.11 2.17
3670 4230 0.458669 GCTTCCAGCCAATCACATGG 59.541 55.000 0.00 0.00 43.70 3.66
3671 4231 1.471119 AGCTTCCAGCCAATCACATG 58.529 50.000 0.00 0.00 43.77 3.21
3729 4289 4.439837 GCTAGGCTGCTTAAACTACTACGT 60.440 45.833 0.00 0.00 0.00 3.57
3730 4290 4.043073 GCTAGGCTGCTTAAACTACTACG 58.957 47.826 0.00 0.00 0.00 3.51
3731 4291 5.007385 TGCTAGGCTGCTTAAACTACTAC 57.993 43.478 0.00 0.00 0.00 2.73
3732 4292 5.598830 AGATGCTAGGCTGCTTAAACTACTA 59.401 40.000 0.00 0.00 0.00 1.82
3910 4475 4.929211 TCTACAACTTGTGATTCGTGGATG 59.071 41.667 4.57 0.00 0.00 3.51
3920 4485 3.321111 GTCCACTCCTCTACAACTTGTGA 59.679 47.826 4.57 0.24 0.00 3.58
3969 4534 5.181811 TCGAAGTGGAGAACATTCGTTACTA 59.818 40.000 6.14 0.00 39.21 1.82
3970 4535 4.022589 TCGAAGTGGAGAACATTCGTTACT 60.023 41.667 6.14 0.00 39.21 2.24
4051 4616 8.373981 ACAGATTTCTTCCACCTAGATATGATG 58.626 37.037 0.00 0.00 0.00 3.07
4083 4678 4.938226 GGGGGATCTAAGCATTAAGATTCG 59.062 45.833 0.00 0.00 0.00 3.34
4145 4740 7.229106 AGTTACTGCTAATGCCTACTACTACTC 59.771 40.741 0.00 0.00 38.71 2.59
4157 4752 4.344390 ACCCCTACTAGTTACTGCTAATGC 59.656 45.833 0.00 0.00 40.20 3.56
4230 4832 2.465860 TGTAGAACCCATCCACGTTG 57.534 50.000 0.00 0.00 0.00 4.10
4251 4853 5.667539 TGTCTATGAAGGACAGGAAGAAG 57.332 43.478 0.00 0.00 38.57 2.85
4269 4871 2.842394 CTTCGCTCACGGCCATGTCT 62.842 60.000 2.24 0.00 40.63 3.41
4278 4880 2.791560 CTGTATGAATCCTTCGCTCACG 59.208 50.000 0.00 0.00 42.01 4.35
4332 4934 0.822164 GAACTAGCTCCTTGGCGGTA 59.178 55.000 0.00 0.00 37.29 4.02
4388 4990 5.122554 TGGCCACGTAACAGTAACAATATTG 59.877 40.000 14.01 14.01 0.00 1.90
4389 4991 5.122711 GTGGCCACGTAACAGTAACAATATT 59.877 40.000 22.49 0.00 0.00 1.28
4390 4992 4.632688 GTGGCCACGTAACAGTAACAATAT 59.367 41.667 22.49 0.00 0.00 1.28
4391 4993 3.995705 GTGGCCACGTAACAGTAACAATA 59.004 43.478 22.49 0.00 0.00 1.90
4564 5166 3.057315 CAGAAACGCTTCCACCATGAATT 60.057 43.478 0.00 0.00 31.28 2.17
4571 5173 0.250338 AGTCCAGAAACGCTTCCACC 60.250 55.000 0.00 0.00 31.28 4.61
4587 5189 3.858238 GCACGGTCAGATGTTACTTAGTC 59.142 47.826 0.00 0.00 0.00 2.59
4623 5225 2.683211 AGCACACTCCCATCCTTTTT 57.317 45.000 0.00 0.00 0.00 1.94
4768 5373 4.771577 ACATTTGTACATGCAATCCCTTCA 59.228 37.500 0.00 0.00 0.00 3.02
4868 5476 2.422597 TGTTTCCACATCGTCCATGAC 58.577 47.619 0.00 0.00 36.21 3.06
4883 5517 8.840867 GTTACGACTTGAATCATCATTTGTTTC 58.159 33.333 0.00 0.00 34.96 2.78
4923 5560 2.514803 GGACACATTGGCCTACAAACT 58.485 47.619 3.32 0.00 44.12 2.66
4936 5573 3.634448 CCTTCATCGAGTCTAGGACACAT 59.366 47.826 0.00 0.00 34.60 3.21
4949 5586 1.819697 CGGATCCTCCTCCTTCATCGA 60.820 57.143 10.75 0.00 33.30 3.59
4950 5587 0.600557 CGGATCCTCCTCCTTCATCG 59.399 60.000 10.75 0.00 33.30 3.84
4970 5621 2.833227 CCCCTTCCACCAACGACA 59.167 61.111 0.00 0.00 0.00 4.35
5099 5751 1.102978 GACCTCTCTCAGTGCCTCTC 58.897 60.000 0.00 0.00 0.00 3.20
5210 5862 3.697439 AATCCATCCACGGGCACGG 62.697 63.158 15.46 0.58 46.48 4.94
5212 5864 2.774799 GCAATCCATCCACGGGCAC 61.775 63.158 0.00 0.00 0.00 5.01
5213 5865 2.440065 GCAATCCATCCACGGGCA 60.440 61.111 0.00 0.00 0.00 5.36
5284 5954 0.391793 GCCTTTGGAGGAGGAAGACG 60.392 60.000 0.00 0.00 46.74 4.18
5290 5960 0.034670 CTTCCTGCCTTTGGAGGAGG 60.035 60.000 3.03 0.59 46.74 4.30
5342 6016 0.609131 TTAGCCAGTCCAGCCAAAGC 60.609 55.000 0.00 0.00 40.32 3.51
5447 6121 2.084546 GCGCCTAAACAAGACAATCCT 58.915 47.619 0.00 0.00 0.00 3.24
5448 6122 1.202031 CGCGCCTAAACAAGACAATCC 60.202 52.381 0.00 0.00 0.00 3.01
5449 6123 1.790481 GCGCGCCTAAACAAGACAATC 60.790 52.381 23.24 0.00 0.00 2.67
5450 6124 0.168128 GCGCGCCTAAACAAGACAAT 59.832 50.000 23.24 0.00 0.00 2.71
5451 6125 1.572447 GCGCGCCTAAACAAGACAA 59.428 52.632 23.24 0.00 0.00 3.18
5452 6126 2.663478 CGCGCGCCTAAACAAGACA 61.663 57.895 27.72 0.00 0.00 3.41
5501 6177 4.744137 CCTATGCTGAATGAAGAGAACTCG 59.256 45.833 0.00 0.00 34.09 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.