Multiple sequence alignment - TraesCS3B01G240800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G240800 chr3B 100.000 5283 0 0 1 5283 379678756 379684038 0.000000e+00 9756
1 TraesCS3B01G240800 chr3B 93.939 66 4 0 4634 4699 379683325 379683390 3.370000e-17 100
2 TraesCS3B01G240800 chr3B 93.939 66 4 0 4570 4635 379683389 379683454 3.370000e-17 100
3 TraesCS3B01G240800 chr3A 93.986 1879 63 21 214 2075 375768314 375770159 0.000000e+00 2798
4 TraesCS3B01G240800 chr3A 94.925 867 18 15 2089 2950 375770140 375770985 0.000000e+00 1334
5 TraesCS3B01G240800 chr3A 95.796 785 25 6 3770 4548 375772101 375772883 0.000000e+00 1260
6 TraesCS3B01G240800 chr3A 97.368 494 11 1 3220 3713 375771597 375772088 0.000000e+00 839
7 TraesCS3B01G240800 chr3A 90.786 369 24 6 4687 5045 375772881 375773249 7.950000e-133 484
8 TraesCS3B01G240800 chr3A 95.730 281 6 2 2948 3222 375771044 375771324 1.040000e-121 448
9 TraesCS3B01G240800 chr3A 82.632 190 30 3 5072 5260 732225705 732225518 1.180000e-36 165
10 TraesCS3B01G240800 chr3A 92.593 81 4 2 149 229 375768222 375768300 1.200000e-21 115
11 TraesCS3B01G240800 chr3D 93.205 1869 62 27 246 2075 286875507 286877349 0.000000e+00 2687
12 TraesCS3B01G240800 chr3D 98.385 867 9 2 2089 2950 286877330 286878196 0.000000e+00 1519
13 TraesCS3B01G240800 chr3D 95.063 871 32 6 3770 4635 286879222 286880086 0.000000e+00 1360
14 TraesCS3B01G240800 chr3D 94.153 496 14 2 3218 3713 286878729 286879209 0.000000e+00 741
15 TraesCS3B01G240800 chr3D 94.255 470 24 2 4634 5102 286880021 286880488 0.000000e+00 715
16 TraesCS3B01G240800 chr3D 94.306 281 8 3 2948 3222 286878254 286878532 1.760000e-114 424
17 TraesCS3B01G240800 chr3D 92.982 114 6 1 149 262 286874779 286874890 1.180000e-36 165
18 TraesCS3B01G240800 chr5B 93.966 116 7 0 1 116 328280859 328280974 5.440000e-40 176
19 TraesCS3B01G240800 chr4A 91.837 98 8 0 2 99 567369531 567369434 2.570000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G240800 chr3B 379678756 379684038 5282 False 3318.666667 9756 95.959333 1 5283 3 chr3B.!!$F1 5282
1 TraesCS3B01G240800 chr3A 375768222 375773249 5027 False 1039.714286 2798 94.454857 149 5045 7 chr3A.!!$F1 4896
2 TraesCS3B01G240800 chr3D 286874779 286880488 5709 False 1087.285714 2687 94.621286 149 5102 7 chr3D.!!$F1 4953

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 108 0.331616 GGGGCACAGGGTAACAGAAT 59.668 55.000 0.00 0.0 39.74 2.40 F
1398 2123 0.173481 CGCGGAAGAGAGATGGTGAA 59.827 55.000 0.00 0.0 0.00 3.18 F
1452 2177 0.467384 ACACTGACAGCTGCTCAACT 59.533 50.000 15.27 0.0 0.00 3.16 F
1644 2369 1.066573 CAGGATGAAAGCGTCTCTGGT 60.067 52.381 0.00 0.0 39.69 4.00 F
1775 2500 1.153168 CGGTGATGGCCTGGGTTAG 60.153 63.158 3.32 0.0 0.00 2.34 F
1839 2564 1.731969 CTTGAAAGCAGCCGCAAGC 60.732 57.895 0.00 0.0 42.27 4.01 F
3659 4741 1.810151 GCGAAATCAAGCTTGTGGGTA 59.190 47.619 25.19 6.8 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1719 2444 0.035152 TTACCCAGCTGCTCACCATG 60.035 55.000 8.66 0.00 0.00 3.66 R
2664 3396 0.969149 ATGTGTCGACTTCTGGCAGA 59.031 50.000 14.43 14.43 0.00 4.26 R
2813 3550 2.613026 TCCGAGTTTGCAGTTCTTCA 57.387 45.000 0.00 0.00 0.00 3.02 R
3641 4723 3.494045 GCTACCCACAAGCTTGATTTC 57.506 47.619 32.50 10.52 37.01 2.17 R
3757 4839 1.150827 GCCAAATGACAAAAGCCTGC 58.849 50.000 0.00 0.00 0.00 4.85 R
3759 4841 1.720781 AGGCCAAATGACAAAAGCCT 58.279 45.000 5.01 5.99 45.72 4.58 R
5259 6360 0.033642 GGTCCTTAGCGGTAGATGCC 59.966 60.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.467226 GGGTGGGATCGGCTCGAA 61.467 66.667 1.44 0.00 39.99 3.71
18 19 2.582436 GGTGGGATCGGCTCGAAA 59.418 61.111 1.44 0.00 39.99 3.46
19 20 1.814169 GGTGGGATCGGCTCGAAAC 60.814 63.158 1.44 0.41 39.99 2.78
20 21 1.218316 GTGGGATCGGCTCGAAACT 59.782 57.895 1.44 0.00 39.99 2.66
21 22 1.084370 GTGGGATCGGCTCGAAACTG 61.084 60.000 1.44 0.00 39.99 3.16
22 23 1.521681 GGGATCGGCTCGAAACTGG 60.522 63.158 1.44 0.00 39.99 4.00
23 24 1.218316 GGATCGGCTCGAAACTGGT 59.782 57.895 1.44 0.00 39.99 4.00
24 25 1.084370 GGATCGGCTCGAAACTGGTG 61.084 60.000 1.44 0.00 39.99 4.17
25 26 0.389948 GATCGGCTCGAAACTGGTGT 60.390 55.000 1.44 0.00 39.99 4.16
26 27 0.670546 ATCGGCTCGAAACTGGTGTG 60.671 55.000 1.44 0.00 39.99 3.82
27 28 1.594293 CGGCTCGAAACTGGTGTGT 60.594 57.895 0.00 0.00 0.00 3.72
28 29 1.157870 CGGCTCGAAACTGGTGTGTT 61.158 55.000 0.00 0.00 0.00 3.32
29 30 1.021968 GGCTCGAAACTGGTGTGTTT 58.978 50.000 0.00 0.00 42.11 2.83
30 31 1.404035 GGCTCGAAACTGGTGTGTTTT 59.596 47.619 0.00 0.00 39.86 2.43
31 32 2.450160 GCTCGAAACTGGTGTGTTTTG 58.550 47.619 0.00 0.00 39.86 2.44
32 33 2.159435 GCTCGAAACTGGTGTGTTTTGT 60.159 45.455 0.00 0.00 39.86 2.83
33 34 3.672241 GCTCGAAACTGGTGTGTTTTGTT 60.672 43.478 0.00 0.00 39.86 2.83
34 35 4.481463 CTCGAAACTGGTGTGTTTTGTTT 58.519 39.130 0.00 0.00 39.86 2.83
35 36 4.872664 TCGAAACTGGTGTGTTTTGTTTT 58.127 34.783 0.00 0.00 39.86 2.43
36 37 4.681942 TCGAAACTGGTGTGTTTTGTTTTG 59.318 37.500 0.00 0.00 39.86 2.44
37 38 4.143221 CGAAACTGGTGTGTTTTGTTTTGG 60.143 41.667 0.00 0.00 39.86 3.28
38 39 3.326836 ACTGGTGTGTTTTGTTTTGGG 57.673 42.857 0.00 0.00 0.00 4.12
39 40 2.006169 CTGGTGTGTTTTGTTTTGGGC 58.994 47.619 0.00 0.00 0.00 5.36
40 41 1.625818 TGGTGTGTTTTGTTTTGGGCT 59.374 42.857 0.00 0.00 0.00 5.19
41 42 2.039084 TGGTGTGTTTTGTTTTGGGCTT 59.961 40.909 0.00 0.00 0.00 4.35
42 43 2.675844 GGTGTGTTTTGTTTTGGGCTTC 59.324 45.455 0.00 0.00 0.00 3.86
43 44 2.347150 GTGTGTTTTGTTTTGGGCTTCG 59.653 45.455 0.00 0.00 0.00 3.79
44 45 1.930503 GTGTTTTGTTTTGGGCTTCGG 59.069 47.619 0.00 0.00 0.00 4.30
45 46 1.134670 TGTTTTGTTTTGGGCTTCGGG 60.135 47.619 0.00 0.00 0.00 5.14
46 47 0.466124 TTTTGTTTTGGGCTTCGGGG 59.534 50.000 0.00 0.00 0.00 5.73
47 48 0.688087 TTTGTTTTGGGCTTCGGGGT 60.688 50.000 0.00 0.00 0.00 4.95
48 49 1.395826 TTGTTTTGGGCTTCGGGGTG 61.396 55.000 0.00 0.00 0.00 4.61
49 50 2.203567 TTTTGGGCTTCGGGGTGG 60.204 61.111 0.00 0.00 0.00 4.61
50 51 3.819016 TTTTGGGCTTCGGGGTGGG 62.819 63.158 0.00 0.00 0.00 4.61
55 56 4.660938 GCTTCGGGGTGGGCTTGT 62.661 66.667 0.00 0.00 0.00 3.16
56 57 2.115266 CTTCGGGGTGGGCTTGTT 59.885 61.111 0.00 0.00 0.00 2.83
57 58 1.530655 CTTCGGGGTGGGCTTGTTT 60.531 57.895 0.00 0.00 0.00 2.83
58 59 1.524008 CTTCGGGGTGGGCTTGTTTC 61.524 60.000 0.00 0.00 0.00 2.78
59 60 2.002018 TTCGGGGTGGGCTTGTTTCT 62.002 55.000 0.00 0.00 0.00 2.52
60 61 1.530655 CGGGGTGGGCTTGTTTCTT 60.531 57.895 0.00 0.00 0.00 2.52
61 62 1.112916 CGGGGTGGGCTTGTTTCTTT 61.113 55.000 0.00 0.00 0.00 2.52
62 63 1.128200 GGGGTGGGCTTGTTTCTTTT 58.872 50.000 0.00 0.00 0.00 2.27
63 64 1.488812 GGGGTGGGCTTGTTTCTTTTT 59.511 47.619 0.00 0.00 0.00 1.94
64 65 2.560504 GGGTGGGCTTGTTTCTTTTTG 58.439 47.619 0.00 0.00 0.00 2.44
65 66 2.093181 GGGTGGGCTTGTTTCTTTTTGT 60.093 45.455 0.00 0.00 0.00 2.83
66 67 3.194861 GGTGGGCTTGTTTCTTTTTGTC 58.805 45.455 0.00 0.00 0.00 3.18
67 68 2.857748 GTGGGCTTGTTTCTTTTTGTCG 59.142 45.455 0.00 0.00 0.00 4.35
68 69 2.494073 TGGGCTTGTTTCTTTTTGTCGT 59.506 40.909 0.00 0.00 0.00 4.34
69 70 3.695060 TGGGCTTGTTTCTTTTTGTCGTA 59.305 39.130 0.00 0.00 0.00 3.43
70 71 4.039703 GGGCTTGTTTCTTTTTGTCGTAC 58.960 43.478 0.00 0.00 0.00 3.67
71 72 4.039703 GGCTTGTTTCTTTTTGTCGTACC 58.960 43.478 0.00 0.00 0.00 3.34
72 73 3.722289 GCTTGTTTCTTTTTGTCGTACCG 59.278 43.478 0.00 0.00 0.00 4.02
73 74 4.494526 GCTTGTTTCTTTTTGTCGTACCGA 60.495 41.667 0.00 0.00 0.00 4.69
74 75 5.738118 TTGTTTCTTTTTGTCGTACCGAT 57.262 34.783 0.00 0.00 38.42 4.18
75 76 5.738118 TGTTTCTTTTTGTCGTACCGATT 57.262 34.783 0.00 0.00 38.42 3.34
76 77 5.740406 TGTTTCTTTTTGTCGTACCGATTC 58.260 37.500 0.00 0.00 38.42 2.52
77 78 4.634349 TTCTTTTTGTCGTACCGATTCG 57.366 40.909 0.00 0.00 38.42 3.34
90 91 2.960819 CCGATTCGGCTTCTATAAGGG 58.039 52.381 12.95 0.00 41.17 3.95
91 92 2.353803 CCGATTCGGCTTCTATAAGGGG 60.354 54.545 12.95 0.00 41.17 4.79
92 93 2.701107 GATTCGGCTTCTATAAGGGGC 58.299 52.381 0.00 0.00 32.98 5.80
93 94 1.502690 TTCGGCTTCTATAAGGGGCA 58.497 50.000 0.00 0.00 32.98 5.36
94 95 0.756903 TCGGCTTCTATAAGGGGCAC 59.243 55.000 0.00 0.00 32.98 5.01
95 96 0.468226 CGGCTTCTATAAGGGGCACA 59.532 55.000 0.00 0.00 32.98 4.57
96 97 1.541233 CGGCTTCTATAAGGGGCACAG 60.541 57.143 0.00 0.00 32.98 3.66
97 98 1.202818 GGCTTCTATAAGGGGCACAGG 60.203 57.143 0.00 0.00 32.98 4.00
98 99 1.202818 GCTTCTATAAGGGGCACAGGG 60.203 57.143 0.00 0.00 32.98 4.45
99 100 2.127708 CTTCTATAAGGGGCACAGGGT 58.872 52.381 0.00 0.00 0.00 4.34
100 101 3.314693 CTTCTATAAGGGGCACAGGGTA 58.685 50.000 0.00 0.00 0.00 3.69
101 102 3.424724 TCTATAAGGGGCACAGGGTAA 57.575 47.619 0.00 0.00 0.00 2.85
102 103 3.043418 TCTATAAGGGGCACAGGGTAAC 58.957 50.000 0.00 0.00 0.00 2.50
103 104 1.676248 ATAAGGGGCACAGGGTAACA 58.324 50.000 0.00 0.00 39.74 2.41
104 105 0.988832 TAAGGGGCACAGGGTAACAG 59.011 55.000 0.00 0.00 39.74 3.16
105 106 0.770557 AAGGGGCACAGGGTAACAGA 60.771 55.000 0.00 0.00 39.74 3.41
106 107 0.770557 AGGGGCACAGGGTAACAGAA 60.771 55.000 0.00 0.00 39.74 3.02
107 108 0.331616 GGGGCACAGGGTAACAGAAT 59.668 55.000 0.00 0.00 39.74 2.40
108 109 1.562475 GGGGCACAGGGTAACAGAATA 59.438 52.381 0.00 0.00 39.74 1.75
109 110 2.025699 GGGGCACAGGGTAACAGAATAA 60.026 50.000 0.00 0.00 39.74 1.40
110 111 3.372675 GGGGCACAGGGTAACAGAATAAT 60.373 47.826 0.00 0.00 39.74 1.28
111 112 4.141344 GGGGCACAGGGTAACAGAATAATA 60.141 45.833 0.00 0.00 39.74 0.98
112 113 5.457633 GGGGCACAGGGTAACAGAATAATAT 60.458 44.000 0.00 0.00 39.74 1.28
113 114 6.068670 GGGCACAGGGTAACAGAATAATATT 58.931 40.000 0.00 0.00 39.74 1.28
114 115 6.206829 GGGCACAGGGTAACAGAATAATATTC 59.793 42.308 4.89 4.89 39.74 1.75
115 116 6.998673 GGCACAGGGTAACAGAATAATATTCT 59.001 38.462 9.56 9.56 39.74 2.40
116 117 7.173390 GGCACAGGGTAACAGAATAATATTCTC 59.827 40.741 12.24 2.32 39.74 2.87
117 118 7.934120 GCACAGGGTAACAGAATAATATTCTCT 59.066 37.037 12.24 6.06 39.74 3.10
118 119 9.482627 CACAGGGTAACAGAATAATATTCTCTC 57.517 37.037 12.24 2.41 39.74 3.20
119 120 9.440761 ACAGGGTAACAGAATAATATTCTCTCT 57.559 33.333 12.24 4.58 39.74 3.10
120 121 9.921637 CAGGGTAACAGAATAATATTCTCTCTC 57.078 37.037 12.24 4.40 39.74 3.20
121 122 9.890915 AGGGTAACAGAATAATATTCTCTCTCT 57.109 33.333 12.24 6.28 39.74 3.10
165 166 8.954729 TCCATCCCATATTCCTCTTACAATAAA 58.045 33.333 0.00 0.00 0.00 1.40
306 969 2.174639 TGCAAGGGAAGAGAAGACCAAA 59.825 45.455 0.00 0.00 0.00 3.28
308 971 3.416156 CAAGGGAAGAGAAGACCAAAGG 58.584 50.000 0.00 0.00 0.00 3.11
309 972 2.991580 AGGGAAGAGAAGACCAAAGGA 58.008 47.619 0.00 0.00 0.00 3.36
313 976 4.520874 GGGAAGAGAAGACCAAAGGAAAAG 59.479 45.833 0.00 0.00 0.00 2.27
349 1014 0.969894 AGTGGAGGAGTTTCCGTGAG 59.030 55.000 0.00 0.00 42.75 3.51
437 1106 1.444895 CGCACCGCTACTTTACCGT 60.445 57.895 0.00 0.00 0.00 4.83
507 1176 0.827368 CCTCTCCTTTTCCCCTCTCG 59.173 60.000 0.00 0.00 0.00 4.04
548 1217 1.528309 CCCTCTCTCCTCGCCTCTC 60.528 68.421 0.00 0.00 0.00 3.20
557 1226 1.216710 CTCGCCTCTCCTTCACCAC 59.783 63.158 0.00 0.00 0.00 4.16
596 1265 2.445654 CAGAGGGAGGGAGGGAGC 60.446 72.222 0.00 0.00 0.00 4.70
597 1266 3.773154 AGAGGGAGGGAGGGAGCC 61.773 72.222 0.00 0.00 0.00 4.70
647 1324 2.115291 CGGGGCTGCTTAGCTTTCC 61.115 63.158 5.60 3.70 34.73 3.13
708 1385 5.701290 CGTTTCTTCCTTTCCAGTAAGTCAT 59.299 40.000 0.00 0.00 0.00 3.06
728 1405 2.453521 TCCGAGCAGGCTAGAGTTAAA 58.546 47.619 2.81 0.00 40.77 1.52
735 1412 2.434702 CAGGCTAGAGTTAAATCGGGGT 59.565 50.000 0.00 0.00 0.00 4.95
839 1516 2.448453 ACTGATATAGGAGCGGGCTAC 58.552 52.381 0.00 0.00 0.00 3.58
883 1588 2.702592 TCTTGTTTCGGTGGAGTTGT 57.297 45.000 0.00 0.00 0.00 3.32
885 1590 4.139859 TCTTGTTTCGGTGGAGTTGTTA 57.860 40.909 0.00 0.00 0.00 2.41
886 1591 4.124238 TCTTGTTTCGGTGGAGTTGTTAG 58.876 43.478 0.00 0.00 0.00 2.34
887 1592 2.841215 TGTTTCGGTGGAGTTGTTAGG 58.159 47.619 0.00 0.00 0.00 2.69
888 1593 2.435069 TGTTTCGGTGGAGTTGTTAGGA 59.565 45.455 0.00 0.00 0.00 2.94
889 1594 3.118334 TGTTTCGGTGGAGTTGTTAGGAA 60.118 43.478 0.00 0.00 0.00 3.36
890 1595 4.070009 GTTTCGGTGGAGTTGTTAGGAAT 58.930 43.478 0.00 0.00 0.00 3.01
891 1596 3.604875 TCGGTGGAGTTGTTAGGAATC 57.395 47.619 0.00 0.00 0.00 2.52
892 1597 2.901192 TCGGTGGAGTTGTTAGGAATCA 59.099 45.455 0.00 0.00 0.00 2.57
957 1670 3.420839 CCGATTTGGGATTTCCTTTCG 57.579 47.619 0.00 1.39 36.20 3.46
1077 1790 2.496899 GGAGGAACCTCATGAAGCAA 57.503 50.000 20.39 0.00 44.40 3.91
1080 1793 3.416156 GAGGAACCTCATGAAGCAACTT 58.584 45.455 15.05 0.00 42.31 2.66
1205 1918 1.302832 CACACCAGTCCCTTCCAGC 60.303 63.158 0.00 0.00 0.00 4.85
1260 1982 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1303 2025 1.168714 GACTTCTTCCATGCCACCAC 58.831 55.000 0.00 0.00 0.00 4.16
1311 2033 2.034879 CATGCCACCACACTCGGTC 61.035 63.158 0.00 0.00 37.07 4.79
1336 2058 1.076850 TCAATGCCGCCATCACCAT 60.077 52.632 0.00 0.00 0.00 3.55
1365 2087 2.498885 ACCACTCATACCGTTTAGTCCC 59.501 50.000 0.00 0.00 0.00 4.46
1398 2123 0.173481 CGCGGAAGAGAGATGGTGAA 59.827 55.000 0.00 0.00 0.00 3.18
1402 2127 2.493675 CGGAAGAGAGATGGTGAACTCA 59.506 50.000 0.00 0.00 35.83 3.41
1408 2133 1.002087 GAGATGGTGAACTCAACGGGT 59.998 52.381 0.00 0.00 36.03 5.28
1449 2174 1.006922 CGACACTGACAGCTGCTCA 60.007 57.895 15.27 15.26 0.00 4.26
1452 2177 0.467384 ACACTGACAGCTGCTCAACT 59.533 50.000 15.27 0.00 0.00 3.16
1578 2303 5.643777 CGATAAAGAGGTTGAATCACAGGTT 59.356 40.000 0.00 0.00 0.00 3.50
1580 2305 7.201530 CGATAAAGAGGTTGAATCACAGGTTAC 60.202 40.741 0.00 0.00 0.00 2.50
1605 2330 2.432444 GATGACGATTGGGTGGAAACA 58.568 47.619 0.00 0.00 38.70 2.83
1644 2369 1.066573 CAGGATGAAAGCGTCTCTGGT 60.067 52.381 0.00 0.00 39.69 4.00
1676 2401 2.544267 GCATACTTAGGCGTGTGGAATC 59.456 50.000 0.00 0.00 0.00 2.52
1719 2444 5.067805 GGTTATGGGTGATGAAAACTCATCC 59.932 44.000 11.55 1.50 44.24 3.51
1723 2448 3.382546 GGGTGATGAAAACTCATCCATGG 59.617 47.826 4.97 4.97 42.48 3.66
1772 2497 2.933287 TTCGGTGATGGCCTGGGT 60.933 61.111 3.32 0.00 0.00 4.51
1773 2498 2.484287 CTTCGGTGATGGCCTGGGTT 62.484 60.000 3.32 0.00 0.00 4.11
1775 2500 1.153168 CGGTGATGGCCTGGGTTAG 60.153 63.158 3.32 0.00 0.00 2.34
1839 2564 1.731969 CTTGAAAGCAGCCGCAAGC 60.732 57.895 0.00 0.00 42.27 4.01
1952 2677 9.175312 CTTTTCTCATCCATATATCATCCTTGG 57.825 37.037 0.00 0.00 0.00 3.61
2044 2771 7.925483 CCTTATCTAGCCTCTTATGATGCATAC 59.075 40.741 0.00 0.00 36.49 2.39
2045 2772 6.864151 ATCTAGCCTCTTATGATGCATACA 57.136 37.500 0.00 0.00 36.49 2.29
2047 2774 6.637657 TCTAGCCTCTTATGATGCATACATG 58.362 40.000 16.93 0.00 36.35 3.21
2048 2775 5.238624 AGCCTCTTATGATGCATACATGT 57.761 39.130 16.93 2.69 36.35 3.21
2049 2776 6.364568 AGCCTCTTATGATGCATACATGTA 57.635 37.500 8.27 8.27 36.35 2.29
2050 2777 6.169094 AGCCTCTTATGATGCATACATGTAC 58.831 40.000 7.96 0.00 36.35 2.90
2052 2779 7.179160 AGCCTCTTATGATGCATACATGTACTA 59.821 37.037 7.96 0.00 36.35 1.82
2053 2780 7.984050 GCCTCTTATGATGCATACATGTACTAT 59.016 37.037 7.96 2.96 36.35 2.12
2054 2781 9.310716 CCTCTTATGATGCATACATGTACTATG 57.689 37.037 7.96 5.18 36.35 2.23
2061 2788 9.643693 TGATGCATACATGTACTATGAAGTATG 57.356 33.333 7.96 0.57 37.29 2.39
2062 2789 9.645059 GATGCATACATGTACTATGAAGTATGT 57.355 33.333 7.96 4.83 40.34 2.29
2063 2790 9.645059 ATGCATACATGTACTATGAAGTATGTC 57.355 33.333 7.96 0.00 40.30 3.06
2064 2791 8.637986 TGCATACATGTACTATGAAGTATGTCA 58.362 33.333 7.96 0.34 40.30 3.58
2065 2792 9.476202 GCATACATGTACTATGAAGTATGTCAA 57.524 33.333 7.96 0.00 40.30 3.18
2067 2794 9.982651 ATACATGTACTATGAAGTATGTCAACC 57.017 33.333 7.96 0.00 40.30 3.77
2068 2795 8.079211 ACATGTACTATGAAGTATGTCAACCT 57.921 34.615 0.00 0.00 40.30 3.50
2069 2796 8.540388 ACATGTACTATGAAGTATGTCAACCTT 58.460 33.333 0.00 0.00 40.30 3.50
2070 2797 9.035607 CATGTACTATGAAGTATGTCAACCTTC 57.964 37.037 7.55 7.55 40.30 3.46
2071 2798 8.362464 TGTACTATGAAGTATGTCAACCTTCT 57.638 34.615 13.14 5.10 40.30 2.85
2072 2799 8.812972 TGTACTATGAAGTATGTCAACCTTCTT 58.187 33.333 13.14 10.38 40.30 2.52
2073 2800 9.088512 GTACTATGAAGTATGTCAACCTTCTTG 57.911 37.037 13.14 7.81 40.30 3.02
2074 2801 7.680730 ACTATGAAGTATGTCAACCTTCTTGT 58.319 34.615 13.14 8.22 36.43 3.16
2075 2802 8.157476 ACTATGAAGTATGTCAACCTTCTTGTT 58.843 33.333 13.14 0.00 36.43 2.83
2076 2803 6.861065 TGAAGTATGTCAACCTTCTTGTTC 57.139 37.500 13.14 0.00 36.43 3.18
2077 2804 6.591935 TGAAGTATGTCAACCTTCTTGTTCT 58.408 36.000 13.14 0.00 36.43 3.01
2078 2805 6.483307 TGAAGTATGTCAACCTTCTTGTTCTG 59.517 38.462 13.14 0.00 36.43 3.02
2079 2806 5.930135 AGTATGTCAACCTTCTTGTTCTGT 58.070 37.500 0.00 0.00 0.00 3.41
2080 2807 5.992217 AGTATGTCAACCTTCTTGTTCTGTC 59.008 40.000 0.00 0.00 0.00 3.51
2081 2808 4.214986 TGTCAACCTTCTTGTTCTGTCA 57.785 40.909 0.00 0.00 0.00 3.58
2082 2809 4.584874 TGTCAACCTTCTTGTTCTGTCAA 58.415 39.130 0.00 0.00 0.00 3.18
2083 2810 5.007034 TGTCAACCTTCTTGTTCTGTCAAA 58.993 37.500 0.00 0.00 0.00 2.69
2084 2811 5.475220 TGTCAACCTTCTTGTTCTGTCAAAA 59.525 36.000 0.00 0.00 0.00 2.44
2085 2812 6.015856 TGTCAACCTTCTTGTTCTGTCAAAAA 60.016 34.615 0.00 0.00 0.00 1.94
2184 2915 3.131046 GCAAAGCAATAGGTAATGGCACT 59.869 43.478 0.00 0.00 36.93 4.40
2274 3006 4.366267 ACCATCACTTCCTGAGGAATACT 58.634 43.478 15.35 0.00 41.23 2.12
2651 3383 9.932207 GGGAAATTGATGCATCATGAATAAATA 57.068 29.630 29.13 12.01 36.56 1.40
2813 3550 5.125578 GGCAGAGAAAGTTCGGGAAAATATT 59.874 40.000 0.00 0.00 0.00 1.28
3137 3939 1.896220 TTCATTCAGGATATGGCCGC 58.104 50.000 0.00 0.00 0.00 6.53
3511 4593 3.216800 TGATTGCCTGCCTGATAATGAC 58.783 45.455 0.00 0.00 0.00 3.06
3641 4723 4.904116 TCAGAGTTTTGTTTGTTACTGCG 58.096 39.130 0.00 0.00 0.00 5.18
3654 4736 3.563808 TGTTACTGCGAAATCAAGCTTGT 59.436 39.130 25.19 10.69 0.00 3.16
3659 4741 1.810151 GCGAAATCAAGCTTGTGGGTA 59.190 47.619 25.19 6.80 0.00 3.69
3661 4743 2.159517 CGAAATCAAGCTTGTGGGTAGC 60.160 50.000 25.19 9.22 38.93 3.58
3679 4761 5.279456 GGGTAGCTTTGGTTGAACATTCATT 60.279 40.000 0.00 0.00 37.00 2.57
3713 4795 6.110707 TGGACGATTAACCTTCCATTCTTAC 58.889 40.000 0.00 0.00 33.02 2.34
3714 4796 5.526479 GGACGATTAACCTTCCATTCTTACC 59.474 44.000 0.00 0.00 0.00 2.85
3715 4797 5.434408 ACGATTAACCTTCCATTCTTACCC 58.566 41.667 0.00 0.00 0.00 3.69
3716 4798 4.820173 CGATTAACCTTCCATTCTTACCCC 59.180 45.833 0.00 0.00 0.00 4.95
3719 4801 6.911993 TTAACCTTCCATTCTTACCCCATA 57.088 37.500 0.00 0.00 0.00 2.74
3721 4803 8.584326 TTAACCTTCCATTCTTACCCCATATA 57.416 34.615 0.00 0.00 0.00 0.86
3722 4804 7.663501 AACCTTCCATTCTTACCCCATATAT 57.336 36.000 0.00 0.00 0.00 0.86
3723 4805 7.032598 ACCTTCCATTCTTACCCCATATATG 57.967 40.000 5.68 5.68 0.00 1.78
3724 4806 6.797540 ACCTTCCATTCTTACCCCATATATGA 59.202 38.462 14.54 0.00 0.00 2.15
3725 4807 7.297108 ACCTTCCATTCTTACCCCATATATGAA 59.703 37.037 14.54 0.00 0.00 2.57
3726 4808 8.339247 CCTTCCATTCTTACCCCATATATGAAT 58.661 37.037 14.54 1.43 30.52 2.57
3727 4809 9.182214 CTTCCATTCTTACCCCATATATGAATG 57.818 37.037 14.54 12.61 40.48 2.67
3728 4810 7.886629 CCATTCTTACCCCATATATGAATGG 57.113 40.000 18.37 18.37 46.72 3.16
3729 4811 7.413446 CCATTCTTACCCCATATATGAATGGT 58.587 38.462 21.21 20.19 46.70 3.55
3730 4812 7.340232 CCATTCTTACCCCATATATGAATGGTG 59.660 40.741 21.21 12.19 46.70 4.17
3731 4813 5.815581 TCTTACCCCATATATGAATGGTGC 58.184 41.667 21.92 0.00 44.29 5.01
3732 4814 5.551583 TCTTACCCCATATATGAATGGTGCT 59.448 40.000 21.92 7.03 44.29 4.40
3733 4815 4.038271 ACCCCATATATGAATGGTGCTG 57.962 45.455 14.54 0.00 44.29 4.41
3734 4816 3.657239 ACCCCATATATGAATGGTGCTGA 59.343 43.478 14.54 0.00 44.29 4.26
3735 4817 4.012374 CCCCATATATGAATGGTGCTGAC 58.988 47.826 14.54 0.00 44.29 3.51
3736 4818 4.012374 CCCATATATGAATGGTGCTGACC 58.988 47.826 14.54 0.00 44.29 4.02
3750 4832 6.759497 GGTGCTGACCATTATACTCTTTTT 57.241 37.500 0.00 0.00 42.59 1.94
3768 4850 3.540314 TTTTCACATGCAGGCTTTTGT 57.460 38.095 0.00 0.00 0.00 2.83
3776 4858 1.150827 GCAGGCTTTTGTCATTTGGC 58.849 50.000 0.00 0.00 0.00 4.52
3791 4873 8.825667 TGTCATTTGGCCTTTCTTTAATTAAC 57.174 30.769 3.32 0.00 0.00 2.01
3871 4956 5.880887 TCTGTCAGTCATACACTCTATCGTT 59.119 40.000 0.00 0.00 30.26 3.85
3872 4957 7.046033 TCTGTCAGTCATACACTCTATCGTTA 58.954 38.462 0.00 0.00 30.26 3.18
3910 4995 2.222685 GCGTCAGCTGAAGAAGAAATCG 60.223 50.000 30.34 20.59 41.01 3.34
3920 5005 4.695455 TGAAGAAGAAATCGGACAACATCC 59.305 41.667 0.00 0.00 45.20 3.51
4129 5214 0.820871 ACCATCTTCAGACGAGCCTC 59.179 55.000 0.00 0.00 0.00 4.70
4337 5425 1.573857 ACCCTTCTCCAAAAACCACCT 59.426 47.619 0.00 0.00 0.00 4.00
4342 5430 4.432712 CTTCTCCAAAAACCACCTTTGTG 58.567 43.478 0.00 0.00 42.39 3.33
4352 5440 7.609760 AAAACCACCTTTGTGAAAGAAAATC 57.390 32.000 0.00 0.00 45.76 2.17
4390 5479 3.364889 TTGAAGTCAGTACAGGTGTCG 57.635 47.619 0.00 0.00 0.00 4.35
4520 5609 5.938710 TGAATAGTAGTCTCACGTCTTCACT 59.061 40.000 0.00 0.00 0.00 3.41
4521 5610 6.092396 TGAATAGTAGTCTCACGTCTTCACTC 59.908 42.308 0.00 0.00 0.00 3.51
4618 5708 1.611977 CCTTGCTGCCATGGTATGATG 59.388 52.381 14.67 0.00 32.94 3.07
4619 5709 1.000607 CTTGCTGCCATGGTATGATGC 60.001 52.381 14.67 9.23 0.00 3.91
4620 5710 0.106619 TGCTGCCATGGTATGATGCA 60.107 50.000 14.67 11.95 0.00 3.96
4621 5711 0.596577 GCTGCCATGGTATGATGCAG 59.403 55.000 14.67 13.06 43.75 4.41
4622 5712 1.816572 GCTGCCATGGTATGATGCAGA 60.817 52.381 18.33 0.00 43.68 4.26
4623 5713 2.152016 CTGCCATGGTATGATGCAGAG 58.848 52.381 14.67 0.00 43.68 3.35
4624 5714 1.202842 TGCCATGGTATGATGCAGAGG 60.203 52.381 14.67 0.00 0.00 3.69
4625 5715 1.202855 GCCATGGTATGATGCAGAGGT 60.203 52.381 14.67 0.00 0.00 3.85
4626 5716 2.775890 CCATGGTATGATGCAGAGGTC 58.224 52.381 2.57 0.00 0.00 3.85
4627 5717 2.105306 CCATGGTATGATGCAGAGGTCA 59.895 50.000 2.57 0.00 0.00 4.02
4628 5718 3.244805 CCATGGTATGATGCAGAGGTCAT 60.245 47.826 2.57 5.86 38.53 3.06
4629 5719 3.480505 TGGTATGATGCAGAGGTCATG 57.519 47.619 10.18 0.00 36.53 3.07
4630 5720 2.773661 TGGTATGATGCAGAGGTCATGT 59.226 45.455 10.18 0.00 36.53 3.21
4631 5721 3.181462 TGGTATGATGCAGAGGTCATGTC 60.181 47.826 10.18 4.37 36.53 3.06
4632 5722 2.235845 ATGATGCAGAGGTCATGTCG 57.764 50.000 0.00 0.00 33.99 4.35
4633 5723 0.176449 TGATGCAGAGGTCATGTCGG 59.824 55.000 0.00 0.00 0.00 4.79
4634 5724 0.531532 GATGCAGAGGTCATGTCGGG 60.532 60.000 0.00 0.00 0.00 5.14
4635 5725 2.512515 GCAGAGGTCATGTCGGGC 60.513 66.667 0.00 0.00 0.00 6.13
4636 5726 3.023949 GCAGAGGTCATGTCGGGCT 62.024 63.158 0.00 0.00 0.00 5.19
4637 5727 1.599047 CAGAGGTCATGTCGGGCTT 59.401 57.895 0.00 0.00 0.00 4.35
4638 5728 0.742281 CAGAGGTCATGTCGGGCTTG 60.742 60.000 0.00 0.00 0.00 4.01
4639 5729 2.045926 AGGTCATGTCGGGCTTGC 60.046 61.111 0.00 0.00 0.00 4.01
4640 5730 3.499737 GGTCATGTCGGGCTTGCG 61.500 66.667 0.00 0.00 0.00 4.85
4641 5731 2.434185 GTCATGTCGGGCTTGCGA 60.434 61.111 0.00 0.00 0.00 5.10
4642 5732 2.434185 TCATGTCGGGCTTGCGAC 60.434 61.111 7.67 7.67 35.87 5.19
4643 5733 3.499737 CATGTCGGGCTTGCGACC 61.500 66.667 11.33 0.00 34.57 4.79
4644 5734 4.015406 ATGTCGGGCTTGCGACCA 62.015 61.111 11.33 2.09 38.74 4.02
4645 5735 3.545124 ATGTCGGGCTTGCGACCAA 62.545 57.895 11.33 0.00 38.74 3.67
4646 5736 3.723348 GTCGGGCTTGCGACCAAC 61.723 66.667 3.77 0.00 38.74 3.77
4649 5739 2.975799 GGGCTTGCGACCAACGAA 60.976 61.111 0.00 0.00 45.77 3.85
4650 5740 2.556287 GGCTTGCGACCAACGAAG 59.444 61.111 0.00 0.00 45.77 3.79
4667 5757 4.359706 ACGAAGTTCATTGTTTTCCTTGC 58.640 39.130 3.32 0.00 37.78 4.01
4668 5758 4.097892 ACGAAGTTCATTGTTTTCCTTGCT 59.902 37.500 3.32 0.00 37.78 3.91
4669 5759 4.442073 CGAAGTTCATTGTTTTCCTTGCTG 59.558 41.667 3.32 0.00 0.00 4.41
4670 5760 3.721035 AGTTCATTGTTTTCCTTGCTGC 58.279 40.909 0.00 0.00 0.00 5.25
4671 5761 2.802247 GTTCATTGTTTTCCTTGCTGCC 59.198 45.455 0.00 0.00 0.00 4.85
4672 5762 2.037901 TCATTGTTTTCCTTGCTGCCA 58.962 42.857 0.00 0.00 0.00 4.92
4673 5763 2.633967 TCATTGTTTTCCTTGCTGCCAT 59.366 40.909 0.00 0.00 0.00 4.40
4674 5764 2.529780 TTGTTTTCCTTGCTGCCATG 57.470 45.000 0.00 0.00 0.00 3.66
4675 5765 0.680618 TGTTTTCCTTGCTGCCATGG 59.319 50.000 7.63 7.63 37.56 3.66
4676 5766 0.681175 GTTTTCCTTGCTGCCATGGT 59.319 50.000 14.67 0.00 37.50 3.55
4677 5767 1.892474 GTTTTCCTTGCTGCCATGGTA 59.108 47.619 14.67 8.24 37.50 3.25
4678 5768 2.497273 GTTTTCCTTGCTGCCATGGTAT 59.503 45.455 14.67 0.00 37.50 2.73
4679 5769 1.766494 TTCCTTGCTGCCATGGTATG 58.234 50.000 14.67 5.03 37.50 2.39
4680 5770 0.918258 TCCTTGCTGCCATGGTATGA 59.082 50.000 14.67 0.00 37.50 2.15
4681 5771 1.496001 TCCTTGCTGCCATGGTATGAT 59.504 47.619 14.67 0.00 37.50 2.45
4695 5785 2.171448 GGTATGATGCAGAGGTCAGGTT 59.829 50.000 0.00 0.00 0.00 3.50
4738 5828 2.282462 AAAACCCCAGCCTCTGCG 60.282 61.111 0.00 0.00 44.33 5.18
4754 5844 2.738314 TCTGCGTCATTGTGATTCACAG 59.262 45.455 18.27 9.27 45.39 3.66
4760 5850 4.611355 CGTCATTGTGATTCACAGAACCAC 60.611 45.833 18.27 11.32 45.39 4.16
4780 5870 6.016555 ACCACCTTTATTAAAGTTGATGCCT 58.983 36.000 13.51 0.00 33.23 4.75
4797 5887 6.695292 GATGCCTAAAACATCAACAAACTG 57.305 37.500 0.00 0.00 42.83 3.16
4845 5935 7.201359 CGGCAGAATCATTACAAGATATACGAC 60.201 40.741 0.00 0.00 0.00 4.34
4847 5937 8.855279 GCAGAATCATTACAAGATATACGACTC 58.145 37.037 0.00 0.00 0.00 3.36
4886 5986 8.451908 TGAGATTATGTTCGAGTATGAGAAGA 57.548 34.615 0.00 0.00 0.00 2.87
4888 5988 9.176181 GAGATTATGTTCGAGTATGAGAAGAAC 57.824 37.037 0.28 0.28 40.90 3.01
4935 6035 5.510671 CAAGTGTGGTTGTTTCATACTCAC 58.489 41.667 0.00 0.00 35.93 3.51
5080 6181 2.277084 ACAGTGTCGTCTTGGTGTTTC 58.723 47.619 0.00 0.00 0.00 2.78
5102 6203 3.390135 GACCCTTTTGGCAAAGTTTAGC 58.610 45.455 13.04 0.00 38.22 3.09
5109 6210 1.751437 GGCAAAGTTTAGCCGGATCT 58.249 50.000 5.05 0.00 41.70 2.75
5110 6211 1.401905 GGCAAAGTTTAGCCGGATCTG 59.598 52.381 5.05 0.00 41.70 2.90
5111 6212 2.356135 GCAAAGTTTAGCCGGATCTGA 58.644 47.619 5.05 0.00 0.00 3.27
5112 6213 2.945668 GCAAAGTTTAGCCGGATCTGAT 59.054 45.455 5.05 0.00 0.00 2.90
5113 6214 3.002759 GCAAAGTTTAGCCGGATCTGATC 59.997 47.826 5.05 9.18 0.00 2.92
5114 6215 4.446371 CAAAGTTTAGCCGGATCTGATCT 58.554 43.478 16.61 2.38 0.00 2.75
5115 6216 4.329462 AAGTTTAGCCGGATCTGATCTC 57.671 45.455 16.61 6.80 0.00 2.75
5116 6217 2.630580 AGTTTAGCCGGATCTGATCTCC 59.369 50.000 16.61 2.51 0.00 3.71
5117 6218 1.633774 TTAGCCGGATCTGATCTCCC 58.366 55.000 16.61 0.96 0.00 4.30
5118 6219 0.780637 TAGCCGGATCTGATCTCCCT 59.219 55.000 16.61 11.94 0.00 4.20
5119 6220 0.105246 AGCCGGATCTGATCTCCCTT 60.105 55.000 16.61 0.00 0.00 3.95
5120 6221 0.761802 GCCGGATCTGATCTCCCTTT 59.238 55.000 16.61 0.00 0.00 3.11
5121 6222 1.542108 GCCGGATCTGATCTCCCTTTG 60.542 57.143 16.61 0.86 0.00 2.77
5122 6223 2.042464 CCGGATCTGATCTCCCTTTGA 58.958 52.381 16.61 0.00 0.00 2.69
5123 6224 2.636893 CCGGATCTGATCTCCCTTTGAT 59.363 50.000 16.61 0.00 0.00 2.57
5124 6225 3.072184 CCGGATCTGATCTCCCTTTGATT 59.928 47.826 16.61 0.00 0.00 2.57
5125 6226 4.445448 CCGGATCTGATCTCCCTTTGATTT 60.445 45.833 16.61 0.00 0.00 2.17
5126 6227 5.128919 CGGATCTGATCTCCCTTTGATTTT 58.871 41.667 16.61 0.00 0.00 1.82
5127 6228 5.238214 CGGATCTGATCTCCCTTTGATTTTC 59.762 44.000 16.61 0.00 0.00 2.29
5128 6229 5.534278 GGATCTGATCTCCCTTTGATTTTCC 59.466 44.000 16.61 0.00 0.00 3.13
5129 6230 5.786121 TCTGATCTCCCTTTGATTTTCCT 57.214 39.130 0.00 0.00 0.00 3.36
5130 6231 6.144845 TCTGATCTCCCTTTGATTTTCCTT 57.855 37.500 0.00 0.00 0.00 3.36
5131 6232 6.183347 TCTGATCTCCCTTTGATTTTCCTTC 58.817 40.000 0.00 0.00 0.00 3.46
5132 6233 5.891198 TGATCTCCCTTTGATTTTCCTTCA 58.109 37.500 0.00 0.00 0.00 3.02
5133 6234 6.314120 TGATCTCCCTTTGATTTTCCTTCAA 58.686 36.000 0.00 0.00 0.00 2.69
5134 6235 6.435277 TGATCTCCCTTTGATTTTCCTTCAAG 59.565 38.462 0.00 0.00 34.76 3.02
5135 6236 5.952387 TCTCCCTTTGATTTTCCTTCAAGA 58.048 37.500 0.00 0.00 34.76 3.02
5136 6237 6.555711 TCTCCCTTTGATTTTCCTTCAAGAT 58.444 36.000 0.00 0.00 34.76 2.40
5137 6238 6.660949 TCTCCCTTTGATTTTCCTTCAAGATC 59.339 38.462 0.00 0.00 34.76 2.75
5138 6239 6.555711 TCCCTTTGATTTTCCTTCAAGATCT 58.444 36.000 0.00 0.00 34.76 2.75
5139 6240 6.435277 TCCCTTTGATTTTCCTTCAAGATCTG 59.565 38.462 0.00 0.00 34.76 2.90
5140 6241 6.435277 CCCTTTGATTTTCCTTCAAGATCTGA 59.565 38.462 0.00 0.00 34.76 3.27
5141 6242 7.311408 CCTTTGATTTTCCTTCAAGATCTGAC 58.689 38.462 0.00 0.00 34.76 3.51
5142 6243 6.824305 TTGATTTTCCTTCAAGATCTGACC 57.176 37.500 0.00 0.00 32.21 4.02
5143 6244 5.256474 TGATTTTCCTTCAAGATCTGACCC 58.744 41.667 0.00 0.00 32.21 4.46
5144 6245 5.014544 TGATTTTCCTTCAAGATCTGACCCT 59.985 40.000 0.00 0.00 32.21 4.34
5145 6246 5.324832 TTTTCCTTCAAGATCTGACCCTT 57.675 39.130 0.00 0.00 32.21 3.95
5146 6247 5.324832 TTTCCTTCAAGATCTGACCCTTT 57.675 39.130 0.00 0.00 32.21 3.11
5147 6248 5.324832 TTCCTTCAAGATCTGACCCTTTT 57.675 39.130 0.00 0.00 32.21 2.27
5148 6249 5.324832 TCCTTCAAGATCTGACCCTTTTT 57.675 39.130 0.00 0.00 32.21 1.94
5149 6250 5.316987 TCCTTCAAGATCTGACCCTTTTTC 58.683 41.667 0.00 0.00 32.21 2.29
5150 6251 4.460731 CCTTCAAGATCTGACCCTTTTTCC 59.539 45.833 0.00 0.00 32.21 3.13
5151 6252 5.320277 CTTCAAGATCTGACCCTTTTTCCT 58.680 41.667 0.00 0.00 32.21 3.36
5152 6253 6.448369 TTCAAGATCTGACCCTTTTTCCTA 57.552 37.500 0.00 0.00 32.21 2.94
5153 6254 5.805728 TCAAGATCTGACCCTTTTTCCTAC 58.194 41.667 0.00 0.00 0.00 3.18
5154 6255 4.846168 AGATCTGACCCTTTTTCCTACC 57.154 45.455 0.00 0.00 0.00 3.18
5155 6256 4.175962 AGATCTGACCCTTTTTCCTACCA 58.824 43.478 0.00 0.00 0.00 3.25
5156 6257 3.782656 TCTGACCCTTTTTCCTACCAC 57.217 47.619 0.00 0.00 0.00 4.16
5157 6258 2.374170 TCTGACCCTTTTTCCTACCACC 59.626 50.000 0.00 0.00 0.00 4.61
5158 6259 2.107552 CTGACCCTTTTTCCTACCACCA 59.892 50.000 0.00 0.00 0.00 4.17
5159 6260 2.158579 TGACCCTTTTTCCTACCACCAC 60.159 50.000 0.00 0.00 0.00 4.16
5160 6261 1.146359 ACCCTTTTTCCTACCACCACC 59.854 52.381 0.00 0.00 0.00 4.61
5161 6262 1.549265 CCCTTTTTCCTACCACCACCC 60.549 57.143 0.00 0.00 0.00 4.61
5162 6263 1.530323 CTTTTTCCTACCACCACCCG 58.470 55.000 0.00 0.00 0.00 5.28
5163 6264 1.072648 CTTTTTCCTACCACCACCCGA 59.927 52.381 0.00 0.00 0.00 5.14
5164 6265 0.397564 TTTTCCTACCACCACCCGAC 59.602 55.000 0.00 0.00 0.00 4.79
5165 6266 1.482748 TTTCCTACCACCACCCGACC 61.483 60.000 0.00 0.00 0.00 4.79
5166 6267 2.284405 CCTACCACCACCCGACCT 60.284 66.667 0.00 0.00 0.00 3.85
5167 6268 2.656069 CCTACCACCACCCGACCTG 61.656 68.421 0.00 0.00 0.00 4.00
5168 6269 2.605295 TACCACCACCCGACCTGG 60.605 66.667 0.00 0.00 37.55 4.45
5186 6287 3.790177 CGGTAGCCTAACGCAACC 58.210 61.111 0.00 0.00 41.38 3.77
5187 6288 1.217244 CGGTAGCCTAACGCAACCT 59.783 57.895 0.00 0.00 41.38 3.50
5188 6289 0.457035 CGGTAGCCTAACGCAACCTA 59.543 55.000 0.00 0.00 41.38 3.08
5189 6290 1.800286 CGGTAGCCTAACGCAACCTAC 60.800 57.143 0.00 0.00 41.38 3.18
5190 6291 1.472201 GGTAGCCTAACGCAACCTACC 60.472 57.143 0.00 0.00 40.66 3.18
5191 6292 0.457035 TAGCCTAACGCAACCTACCG 59.543 55.000 0.00 0.00 41.38 4.02
5192 6293 2.458610 GCCTAACGCAACCTACCGC 61.459 63.158 0.00 0.00 37.47 5.68
5193 6294 1.812507 CCTAACGCAACCTACCGCC 60.813 63.158 0.00 0.00 0.00 6.13
5194 6295 1.079681 CTAACGCAACCTACCGCCA 60.080 57.895 0.00 0.00 0.00 5.69
5195 6296 0.461339 CTAACGCAACCTACCGCCAT 60.461 55.000 0.00 0.00 0.00 4.40
5196 6297 0.741574 TAACGCAACCTACCGCCATG 60.742 55.000 0.00 0.00 0.00 3.66
5197 6298 3.876198 CGCAACCTACCGCCATGC 61.876 66.667 0.00 0.00 0.00 4.06
5198 6299 3.518068 GCAACCTACCGCCATGCC 61.518 66.667 0.00 0.00 0.00 4.40
5199 6300 2.828549 CAACCTACCGCCATGCCC 60.829 66.667 0.00 0.00 0.00 5.36
5200 6301 4.123545 AACCTACCGCCATGCCCC 62.124 66.667 0.00 0.00 0.00 5.80
5217 6318 2.894919 CCCGGTGGTAGGGTAACG 59.105 66.667 0.00 0.00 43.89 3.18
5218 6319 2.724273 CCCGGTGGTAGGGTAACGG 61.724 68.421 0.00 0.00 43.89 4.44
5219 6320 2.724273 CCGGTGGTAGGGTAACGGG 61.724 68.421 0.00 0.00 37.80 5.28
5220 6321 1.682005 CGGTGGTAGGGTAACGGGA 60.682 63.158 0.00 0.00 37.60 5.14
5221 6322 1.669999 CGGTGGTAGGGTAACGGGAG 61.670 65.000 0.00 0.00 37.60 4.30
5222 6323 1.332889 GGTGGTAGGGTAACGGGAGG 61.333 65.000 0.00 0.00 37.60 4.30
5223 6324 1.686800 TGGTAGGGTAACGGGAGGC 60.687 63.158 0.00 0.00 37.60 4.70
5224 6325 2.438249 GGTAGGGTAACGGGAGGCC 61.438 68.421 0.00 0.00 37.60 5.19
5225 6326 2.442643 TAGGGTAACGGGAGGCCG 60.443 66.667 0.00 0.00 39.31 6.13
5228 6329 3.149648 GGTAACGGGAGGCCGCTA 61.150 66.667 6.40 0.00 36.58 4.26
5229 6330 2.724273 GGTAACGGGAGGCCGCTAA 61.724 63.158 6.40 0.00 36.58 3.09
5230 6331 1.520120 GTAACGGGAGGCCGCTAAC 60.520 63.158 6.40 0.00 36.58 2.34
5231 6332 3.067480 TAACGGGAGGCCGCTAACG 62.067 63.158 6.40 11.48 36.58 3.18
5248 6349 2.267961 GGTGGTCCGCCCTAGTTG 59.732 66.667 10.73 0.00 0.00 3.16
5249 6350 2.288025 GGTGGTCCGCCCTAGTTGA 61.288 63.158 10.73 0.00 0.00 3.18
5250 6351 1.079336 GTGGTCCGCCCTAGTTGAC 60.079 63.158 0.00 0.00 0.00 3.18
5251 6352 2.183555 GGTCCGCCCTAGTTGACG 59.816 66.667 0.00 0.00 0.00 4.35
5252 6353 2.643232 GGTCCGCCCTAGTTGACGT 61.643 63.158 0.00 0.00 0.00 4.34
5253 6354 1.445582 GTCCGCCCTAGTTGACGTG 60.446 63.158 0.00 0.00 0.00 4.49
5254 6355 2.125673 CCGCCCTAGTTGACGTGG 60.126 66.667 0.00 0.00 0.00 4.94
5255 6356 2.642254 CCGCCCTAGTTGACGTGGA 61.642 63.158 0.00 0.00 0.00 4.02
5256 6357 1.515954 CGCCCTAGTTGACGTGGAT 59.484 57.895 0.00 0.00 0.00 3.41
5257 6358 0.742505 CGCCCTAGTTGACGTGGATA 59.257 55.000 0.00 0.00 0.00 2.59
5258 6359 1.135527 CGCCCTAGTTGACGTGGATAA 59.864 52.381 0.00 0.00 0.00 1.75
5259 6360 2.798499 CGCCCTAGTTGACGTGGATAAG 60.798 54.545 0.00 0.00 0.00 1.73
5260 6361 2.483188 GCCCTAGTTGACGTGGATAAGG 60.483 54.545 0.00 0.00 0.00 2.69
5261 6362 2.483188 CCCTAGTTGACGTGGATAAGGC 60.483 54.545 0.00 0.00 0.00 4.35
5262 6363 2.167693 CCTAGTTGACGTGGATAAGGCA 59.832 50.000 0.00 0.00 0.00 4.75
5263 6364 3.181465 CCTAGTTGACGTGGATAAGGCAT 60.181 47.826 0.00 0.00 0.00 4.40
5264 6365 2.906354 AGTTGACGTGGATAAGGCATC 58.094 47.619 0.00 0.00 0.00 3.91
5265 6366 2.501723 AGTTGACGTGGATAAGGCATCT 59.498 45.455 0.00 0.00 33.78 2.90
5266 6367 3.704566 AGTTGACGTGGATAAGGCATCTA 59.295 43.478 0.00 0.00 33.78 1.98
5267 6368 3.728076 TGACGTGGATAAGGCATCTAC 57.272 47.619 0.00 0.00 40.73 2.59
5268 6369 2.364324 TGACGTGGATAAGGCATCTACC 59.636 50.000 0.00 0.00 40.98 3.18
5269 6370 1.340248 ACGTGGATAAGGCATCTACCG 59.660 52.381 0.00 0.00 40.98 4.02
5270 6371 1.797025 GTGGATAAGGCATCTACCGC 58.203 55.000 0.00 0.00 38.79 5.68
5271 6372 1.344763 GTGGATAAGGCATCTACCGCT 59.655 52.381 0.00 0.00 38.79 5.52
5272 6373 2.561419 GTGGATAAGGCATCTACCGCTA 59.439 50.000 0.00 0.00 38.79 4.26
5273 6374 3.006537 GTGGATAAGGCATCTACCGCTAA 59.993 47.826 0.00 0.00 38.79 3.09
5274 6375 3.258372 TGGATAAGGCATCTACCGCTAAG 59.742 47.826 0.00 0.00 33.78 2.18
5275 6376 3.368531 GGATAAGGCATCTACCGCTAAGG 60.369 52.174 0.00 0.00 38.79 2.69
5276 6377 1.789523 AAGGCATCTACCGCTAAGGA 58.210 50.000 0.00 0.00 45.00 3.36
5277 6378 1.041437 AGGCATCTACCGCTAAGGAC 58.959 55.000 0.00 0.00 45.00 3.85
5278 6379 0.033642 GGCATCTACCGCTAAGGACC 59.966 60.000 0.00 0.00 45.00 4.46
5279 6380 0.033642 GCATCTACCGCTAAGGACCC 59.966 60.000 0.00 0.00 45.00 4.46
5280 6381 0.680061 CATCTACCGCTAAGGACCCC 59.320 60.000 0.00 0.00 45.00 4.95
5281 6382 0.826672 ATCTACCGCTAAGGACCCCG 60.827 60.000 0.00 0.00 45.00 5.73
5282 6383 1.454479 CTACCGCTAAGGACCCCGA 60.454 63.158 0.00 0.00 45.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.026431 TTTCGAGCCGATCCCACCC 62.026 63.158 0.00 0.00 35.23 4.61
1 2 1.814169 GTTTCGAGCCGATCCCACC 60.814 63.158 0.00 0.00 35.23 4.61
2 3 1.084370 CAGTTTCGAGCCGATCCCAC 61.084 60.000 0.00 0.00 35.23 4.61
3 4 1.218047 CAGTTTCGAGCCGATCCCA 59.782 57.895 0.00 0.00 35.23 4.37
4 5 1.521681 CCAGTTTCGAGCCGATCCC 60.522 63.158 0.00 0.00 35.23 3.85
5 6 1.084370 CACCAGTTTCGAGCCGATCC 61.084 60.000 0.00 0.00 35.23 3.36
6 7 0.389948 ACACCAGTTTCGAGCCGATC 60.390 55.000 0.00 0.00 35.23 3.69
7 8 0.670546 CACACCAGTTTCGAGCCGAT 60.671 55.000 0.00 0.00 35.23 4.18
8 9 1.300620 CACACCAGTTTCGAGCCGA 60.301 57.895 0.00 0.00 0.00 5.54
9 10 1.157870 AACACACCAGTTTCGAGCCG 61.158 55.000 0.00 0.00 0.00 5.52
10 11 1.021968 AAACACACCAGTTTCGAGCC 58.978 50.000 0.00 0.00 37.11 4.70
11 12 2.159435 ACAAAACACACCAGTTTCGAGC 60.159 45.455 0.00 0.00 40.60 5.03
12 13 3.757745 ACAAAACACACCAGTTTCGAG 57.242 42.857 0.00 0.00 40.60 4.04
13 14 4.506886 AAACAAAACACACCAGTTTCGA 57.493 36.364 0.00 0.00 40.60 3.71
14 15 4.143221 CCAAAACAAAACACACCAGTTTCG 60.143 41.667 0.00 0.00 40.60 3.46
15 16 4.153296 CCCAAAACAAAACACACCAGTTTC 59.847 41.667 0.00 0.00 40.60 2.78
16 17 4.068599 CCCAAAACAAAACACACCAGTTT 58.931 39.130 0.00 0.00 43.13 2.66
17 18 3.669536 CCCAAAACAAAACACACCAGTT 58.330 40.909 0.00 0.00 0.00 3.16
18 19 2.614229 GCCCAAAACAAAACACACCAGT 60.614 45.455 0.00 0.00 0.00 4.00
19 20 2.006169 GCCCAAAACAAAACACACCAG 58.994 47.619 0.00 0.00 0.00 4.00
20 21 1.625818 AGCCCAAAACAAAACACACCA 59.374 42.857 0.00 0.00 0.00 4.17
21 22 2.394930 AGCCCAAAACAAAACACACC 57.605 45.000 0.00 0.00 0.00 4.16
22 23 2.347150 CGAAGCCCAAAACAAAACACAC 59.653 45.455 0.00 0.00 0.00 3.82
23 24 2.611518 CGAAGCCCAAAACAAAACACA 58.388 42.857 0.00 0.00 0.00 3.72
24 25 1.930503 CCGAAGCCCAAAACAAAACAC 59.069 47.619 0.00 0.00 0.00 3.32
25 26 1.134670 CCCGAAGCCCAAAACAAAACA 60.135 47.619 0.00 0.00 0.00 2.83
26 27 1.577468 CCCGAAGCCCAAAACAAAAC 58.423 50.000 0.00 0.00 0.00 2.43
27 28 0.466124 CCCCGAAGCCCAAAACAAAA 59.534 50.000 0.00 0.00 0.00 2.44
28 29 0.688087 ACCCCGAAGCCCAAAACAAA 60.688 50.000 0.00 0.00 0.00 2.83
29 30 1.075896 ACCCCGAAGCCCAAAACAA 60.076 52.632 0.00 0.00 0.00 2.83
30 31 1.830408 CACCCCGAAGCCCAAAACA 60.830 57.895 0.00 0.00 0.00 2.83
31 32 2.570284 CCACCCCGAAGCCCAAAAC 61.570 63.158 0.00 0.00 0.00 2.43
32 33 2.203567 CCACCCCGAAGCCCAAAA 60.204 61.111 0.00 0.00 0.00 2.44
33 34 4.293671 CCCACCCCGAAGCCCAAA 62.294 66.667 0.00 0.00 0.00 3.28
38 39 4.660938 ACAAGCCCACCCCGAAGC 62.661 66.667 0.00 0.00 0.00 3.86
39 40 1.524008 GAAACAAGCCCACCCCGAAG 61.524 60.000 0.00 0.00 0.00 3.79
40 41 1.529713 GAAACAAGCCCACCCCGAA 60.530 57.895 0.00 0.00 0.00 4.30
41 42 2.002018 AAGAAACAAGCCCACCCCGA 62.002 55.000 0.00 0.00 0.00 5.14
42 43 1.112916 AAAGAAACAAGCCCACCCCG 61.113 55.000 0.00 0.00 0.00 5.73
43 44 1.128200 AAAAGAAACAAGCCCACCCC 58.872 50.000 0.00 0.00 0.00 4.95
44 45 2.093181 ACAAAAAGAAACAAGCCCACCC 60.093 45.455 0.00 0.00 0.00 4.61
45 46 3.194861 GACAAAAAGAAACAAGCCCACC 58.805 45.455 0.00 0.00 0.00 4.61
46 47 2.857748 CGACAAAAAGAAACAAGCCCAC 59.142 45.455 0.00 0.00 0.00 4.61
47 48 2.494073 ACGACAAAAAGAAACAAGCCCA 59.506 40.909 0.00 0.00 0.00 5.36
48 49 3.159353 ACGACAAAAAGAAACAAGCCC 57.841 42.857 0.00 0.00 0.00 5.19
49 50 4.039703 GGTACGACAAAAAGAAACAAGCC 58.960 43.478 0.00 0.00 0.00 4.35
71 72 2.931320 GCCCCTTATAGAAGCCGAATCG 60.931 54.545 0.00 0.00 0.00 3.34
72 73 2.038557 TGCCCCTTATAGAAGCCGAATC 59.961 50.000 0.00 0.00 0.00 2.52
73 74 2.054799 TGCCCCTTATAGAAGCCGAAT 58.945 47.619 0.00 0.00 0.00 3.34
74 75 1.140252 GTGCCCCTTATAGAAGCCGAA 59.860 52.381 0.00 0.00 0.00 4.30
75 76 0.756903 GTGCCCCTTATAGAAGCCGA 59.243 55.000 0.00 0.00 0.00 5.54
76 77 0.468226 TGTGCCCCTTATAGAAGCCG 59.532 55.000 0.00 0.00 0.00 5.52
77 78 1.202818 CCTGTGCCCCTTATAGAAGCC 60.203 57.143 0.00 0.00 0.00 4.35
78 79 1.202818 CCCTGTGCCCCTTATAGAAGC 60.203 57.143 0.00 0.00 0.00 3.86
79 80 2.127708 ACCCTGTGCCCCTTATAGAAG 58.872 52.381 0.00 0.00 0.00 2.85
80 81 2.280308 ACCCTGTGCCCCTTATAGAA 57.720 50.000 0.00 0.00 0.00 2.10
81 82 3.043418 GTTACCCTGTGCCCCTTATAGA 58.957 50.000 0.00 0.00 0.00 1.98
82 83 2.775384 TGTTACCCTGTGCCCCTTATAG 59.225 50.000 0.00 0.00 0.00 1.31
83 84 2.775384 CTGTTACCCTGTGCCCCTTATA 59.225 50.000 0.00 0.00 0.00 0.98
84 85 1.564348 CTGTTACCCTGTGCCCCTTAT 59.436 52.381 0.00 0.00 0.00 1.73
85 86 0.988832 CTGTTACCCTGTGCCCCTTA 59.011 55.000 0.00 0.00 0.00 2.69
86 87 0.770557 TCTGTTACCCTGTGCCCCTT 60.771 55.000 0.00 0.00 0.00 3.95
87 88 0.770557 TTCTGTTACCCTGTGCCCCT 60.771 55.000 0.00 0.00 0.00 4.79
88 89 0.331616 ATTCTGTTACCCTGTGCCCC 59.668 55.000 0.00 0.00 0.00 5.80
89 90 3.359695 TTATTCTGTTACCCTGTGCCC 57.640 47.619 0.00 0.00 0.00 5.36
90 91 6.998673 AGAATATTATTCTGTTACCCTGTGCC 59.001 38.462 16.38 0.00 0.00 5.01
91 92 7.934120 AGAGAATATTATTCTGTTACCCTGTGC 59.066 37.037 20.90 4.91 0.00 4.57
92 93 9.482627 GAGAGAATATTATTCTGTTACCCTGTG 57.517 37.037 20.90 0.00 0.00 3.66
93 94 9.440761 AGAGAGAATATTATTCTGTTACCCTGT 57.559 33.333 20.90 8.45 0.00 4.00
94 95 9.921637 GAGAGAGAATATTATTCTGTTACCCTG 57.078 37.037 20.90 0.00 0.00 4.45
95 96 9.890915 AGAGAGAGAATATTATTCTGTTACCCT 57.109 33.333 20.90 11.72 0.00 4.34
134 135 8.288812 TGTAAGAGGAATATGGGATGGATTTTT 58.711 33.333 0.00 0.00 0.00 1.94
135 136 7.825709 TGTAAGAGGAATATGGGATGGATTTT 58.174 34.615 0.00 0.00 0.00 1.82
136 137 7.406620 TGTAAGAGGAATATGGGATGGATTT 57.593 36.000 0.00 0.00 0.00 2.17
137 138 7.406620 TTGTAAGAGGAATATGGGATGGATT 57.593 36.000 0.00 0.00 0.00 3.01
138 139 7.594849 ATTGTAAGAGGAATATGGGATGGAT 57.405 36.000 0.00 0.00 0.00 3.41
139 140 8.518720 TTATTGTAAGAGGAATATGGGATGGA 57.481 34.615 0.00 0.00 0.00 3.41
140 141 9.586732 TTTTATTGTAAGAGGAATATGGGATGG 57.413 33.333 0.00 0.00 0.00 3.51
186 187 9.728100 TCCCTCCATATCATGTCACAATATATA 57.272 33.333 0.00 0.00 0.00 0.86
187 188 8.628368 TCCCTCCATATCATGTCACAATATAT 57.372 34.615 0.00 0.00 0.00 0.86
198 199 5.719085 AGCTAACTACTCCCTCCATATCATG 59.281 44.000 0.00 0.00 0.00 3.07
240 270 1.639298 GCCGTCCATGCAAGTGACTC 61.639 60.000 10.63 1.53 0.00 3.36
292 955 6.292150 TCTCTTTTCCTTTGGTCTTCTCTTC 58.708 40.000 0.00 0.00 0.00 2.87
301 964 6.266330 CCTCTCATTTTCTCTTTTCCTTTGGT 59.734 38.462 0.00 0.00 0.00 3.67
306 969 6.192970 TGTCCTCTCATTTTCTCTTTTCCT 57.807 37.500 0.00 0.00 0.00 3.36
308 971 7.358830 CACTTGTCCTCTCATTTTCTCTTTTC 58.641 38.462 0.00 0.00 0.00 2.29
309 972 6.264067 CCACTTGTCCTCTCATTTTCTCTTTT 59.736 38.462 0.00 0.00 0.00 2.27
313 976 4.899502 TCCACTTGTCCTCTCATTTTCTC 58.100 43.478 0.00 0.00 0.00 2.87
349 1014 4.840005 CTCCGCCGCTTTCCCCTC 62.840 72.222 0.00 0.00 0.00 4.30
437 1106 2.355412 GGTTAGCTTTCTTTCCGGGCTA 60.355 50.000 0.00 1.28 34.88 3.93
548 1217 0.613777 GGACTGGTAGGTGGTGAAGG 59.386 60.000 0.00 0.00 0.00 3.46
557 1226 0.670546 CAAGCACACGGACTGGTAGG 60.671 60.000 0.00 0.00 0.00 3.18
596 1265 4.285863 AGAAGGATCTAGACAACCTCAGG 58.714 47.826 13.14 0.00 32.88 3.86
597 1266 5.930837 AAGAAGGATCTAGACAACCTCAG 57.069 43.478 13.14 0.00 33.77 3.35
708 1385 2.139323 TTAACTCTAGCCTGCTCGGA 57.861 50.000 0.00 0.00 33.16 4.55
728 1405 6.661304 ATACTCGTAAAGAATAACCCCGAT 57.339 37.500 0.00 0.00 0.00 4.18
839 1516 0.534412 AACTCTCACATCCTCGCAGG 59.466 55.000 0.00 0.00 36.46 4.85
883 1588 3.576982 ACACTCGGACTGTTGATTCCTAA 59.423 43.478 0.00 0.00 0.00 2.69
885 1590 1.971357 ACACTCGGACTGTTGATTCCT 59.029 47.619 0.00 0.00 0.00 3.36
886 1591 2.457366 ACACTCGGACTGTTGATTCC 57.543 50.000 0.00 0.00 0.00 3.01
892 1597 4.027755 CGCAACACTCGGACTGTT 57.972 55.556 0.00 0.00 31.80 3.16
957 1670 3.818787 CAGATTGCAGCACCGGCC 61.819 66.667 0.00 0.00 42.56 6.13
1205 1918 4.767255 GAGGTGGTGAGGCAGCGG 62.767 72.222 0.00 0.00 34.27 5.52
1249 1971 4.947147 CGGTGGTGGTGGTGGTGG 62.947 72.222 0.00 0.00 0.00 4.61
1303 2025 2.274437 CATTGAGGATGTGACCGAGTG 58.726 52.381 0.00 0.00 34.73 3.51
1311 2033 1.105167 ATGGCGGCATTGAGGATGTG 61.105 55.000 20.18 0.00 38.07 3.21
1365 2087 4.617959 TCTTCCGCGTTCTTATCCTTATG 58.382 43.478 4.92 0.00 0.00 1.90
1379 2101 0.173481 TTCACCATCTCTCTTCCGCG 59.827 55.000 0.00 0.00 0.00 6.46
1381 2103 2.493675 TGAGTTCACCATCTCTCTTCCG 59.506 50.000 0.00 0.00 0.00 4.30
1398 2123 2.418197 CGTGGAATCATACCCGTTGAGT 60.418 50.000 0.00 0.00 0.00 3.41
1402 2127 1.196911 TCCGTGGAATCATACCCGTT 58.803 50.000 0.00 0.00 0.00 4.44
1408 2133 3.634910 TCGTCTTCATCCGTGGAATCATA 59.365 43.478 0.00 0.00 0.00 2.15
1563 2288 3.443681 CCATGGTAACCTGTGATTCAACC 59.556 47.826 2.57 0.00 0.00 3.77
1566 2291 4.227073 TCATCCATGGTAACCTGTGATTCA 59.773 41.667 12.58 0.00 0.00 2.57
1568 2293 4.526970 GTCATCCATGGTAACCTGTGATT 58.473 43.478 12.58 0.00 0.00 2.57
1569 2294 3.432186 CGTCATCCATGGTAACCTGTGAT 60.432 47.826 12.58 0.00 0.00 3.06
1578 2303 2.123589 ACCCAATCGTCATCCATGGTA 58.876 47.619 12.58 0.00 0.00 3.25
1580 2305 1.311859 CACCCAATCGTCATCCATGG 58.688 55.000 4.97 4.97 0.00 3.66
1605 2330 7.835682 TCATCCTGTCCATCAAATTCTATGTTT 59.164 33.333 0.80 0.00 0.00 2.83
1676 2401 1.293924 CCTACTCTTTGCTGGATGCG 58.706 55.000 0.00 0.00 46.63 4.73
1719 2444 0.035152 TTACCCAGCTGCTCACCATG 60.035 55.000 8.66 0.00 0.00 3.66
1723 2448 1.537202 CTTTGTTACCCAGCTGCTCAC 59.463 52.381 8.66 2.38 0.00 3.51
1775 2500 5.348997 GCTATTTCTACCAGTGACTTGTCAC 59.651 44.000 22.08 22.08 40.69 3.67
1839 2564 6.403200 CCAAAAGTATAACAACATCAGTCCCG 60.403 42.308 0.00 0.00 0.00 5.14
1952 2677 9.646427 TTACCAAATGGCATCTAAACAAAATAC 57.354 29.630 0.00 0.00 39.32 1.89
2009 2736 3.182152 AGGCTAGATAAGGGTGTGTGTT 58.818 45.455 0.00 0.00 0.00 3.32
2010 2737 2.766828 GAGGCTAGATAAGGGTGTGTGT 59.233 50.000 0.00 0.00 0.00 3.72
2011 2738 3.034635 AGAGGCTAGATAAGGGTGTGTG 58.965 50.000 0.00 0.00 0.00 3.82
2012 2739 3.406512 AGAGGCTAGATAAGGGTGTGT 57.593 47.619 0.00 0.00 0.00 3.72
2013 2740 5.540337 TCATAAGAGGCTAGATAAGGGTGTG 59.460 44.000 0.00 0.00 0.00 3.82
2014 2741 5.716979 TCATAAGAGGCTAGATAAGGGTGT 58.283 41.667 0.00 0.00 0.00 4.16
2015 2742 6.638610 CATCATAAGAGGCTAGATAAGGGTG 58.361 44.000 0.00 0.00 0.00 4.61
2016 2743 6.865834 CATCATAAGAGGCTAGATAAGGGT 57.134 41.667 0.00 0.00 0.00 4.34
2044 2771 8.948631 AAGGTTGACATACTTCATAGTACATG 57.051 34.615 0.00 0.00 39.59 3.21
2045 2772 8.982723 AGAAGGTTGACATACTTCATAGTACAT 58.017 33.333 17.06 0.00 42.24 2.29
2047 2774 9.088512 CAAGAAGGTTGACATACTTCATAGTAC 57.911 37.037 17.06 0.00 42.24 2.73
2048 2775 8.812972 ACAAGAAGGTTGACATACTTCATAGTA 58.187 33.333 17.06 0.00 42.24 1.82
2049 2776 7.680730 ACAAGAAGGTTGACATACTTCATAGT 58.319 34.615 17.06 11.24 42.24 2.12
2050 2777 8.553459 AACAAGAAGGTTGACATACTTCATAG 57.447 34.615 17.06 10.81 42.24 2.23
2052 2779 7.173907 CAGAACAAGAAGGTTGACATACTTCAT 59.826 37.037 17.06 6.88 42.24 2.57
2053 2780 6.483307 CAGAACAAGAAGGTTGACATACTTCA 59.517 38.462 17.06 0.00 42.24 3.02
2054 2781 6.483640 ACAGAACAAGAAGGTTGACATACTTC 59.516 38.462 10.20 10.20 40.59 3.01
2055 2782 6.357367 ACAGAACAAGAAGGTTGACATACTT 58.643 36.000 0.00 0.00 0.00 2.24
2056 2783 5.930135 ACAGAACAAGAAGGTTGACATACT 58.070 37.500 0.00 0.00 0.00 2.12
2057 2784 5.758296 TGACAGAACAAGAAGGTTGACATAC 59.242 40.000 0.00 0.00 0.00 2.39
2058 2785 5.924356 TGACAGAACAAGAAGGTTGACATA 58.076 37.500 0.00 0.00 0.00 2.29
2059 2786 4.780815 TGACAGAACAAGAAGGTTGACAT 58.219 39.130 0.00 0.00 0.00 3.06
2060 2787 4.214986 TGACAGAACAAGAAGGTTGACA 57.785 40.909 0.00 0.00 0.00 3.58
2061 2788 5.560966 TTTGACAGAACAAGAAGGTTGAC 57.439 39.130 0.00 0.00 0.00 3.18
2062 2789 6.582677 TTTTTGACAGAACAAGAAGGTTGA 57.417 33.333 0.00 0.00 0.00 3.18
2083 2810 9.574516 AGACAAGAAGGTTGACATACTTATTTT 57.425 29.630 0.00 0.00 0.00 1.82
2086 2813 9.823647 CATAGACAAGAAGGTTGACATACTTAT 57.176 33.333 0.00 0.00 0.00 1.73
2087 2814 8.812972 ACATAGACAAGAAGGTTGACATACTTA 58.187 33.333 0.00 0.00 0.00 2.24
2184 2915 7.120285 CGTTGATCCCGAAATATAGTACTCCTA 59.880 40.741 0.00 0.00 0.00 2.94
2274 3006 4.203226 TCCTGCACATAGAACAACAAACA 58.797 39.130 0.00 0.00 0.00 2.83
2651 3383 4.623932 TCTGGCAGAGTAACAAGTCAAT 57.376 40.909 14.43 0.00 0.00 2.57
2664 3396 0.969149 ATGTGTCGACTTCTGGCAGA 59.031 50.000 14.43 14.43 0.00 4.26
2813 3550 2.613026 TCCGAGTTTGCAGTTCTTCA 57.387 45.000 0.00 0.00 0.00 3.02
3061 3859 6.911511 CCGTAAGAGCTATACTTGTGTCTTAC 59.088 42.308 9.13 9.13 41.19 2.34
3137 3939 7.807977 AATTAGTATGGCTCAACATAAGTGG 57.192 36.000 0.00 0.00 35.29 4.00
3641 4723 3.494045 GCTACCCACAAGCTTGATTTC 57.506 47.619 32.50 10.52 37.01 2.17
3654 4736 2.738587 TGTTCAACCAAAGCTACCCA 57.261 45.000 0.00 0.00 0.00 4.51
3659 4741 8.121305 TGTATAATGAATGTTCAACCAAAGCT 57.879 30.769 0.00 0.00 41.13 3.74
3679 4761 9.715121 GGAAGGTTAATCGTCCAAATATGTATA 57.285 33.333 15.01 0.00 35.75 1.47
3696 4778 5.806955 ATGGGGTAAGAATGGAAGGTTAA 57.193 39.130 0.00 0.00 0.00 2.01
3697 4779 8.611257 CATATATGGGGTAAGAATGGAAGGTTA 58.389 37.037 4.68 0.00 0.00 2.85
3727 4809 6.759497 AAAAAGAGTATAATGGTCAGCACC 57.241 37.500 0.00 0.00 44.10 5.01
3747 4829 3.870419 GACAAAAGCCTGCATGTGAAAAA 59.130 39.130 0.00 0.00 0.00 1.94
3748 4830 3.118847 TGACAAAAGCCTGCATGTGAAAA 60.119 39.130 0.00 0.00 0.00 2.29
3749 4831 2.429971 TGACAAAAGCCTGCATGTGAAA 59.570 40.909 0.00 0.00 0.00 2.69
3750 4832 2.030371 TGACAAAAGCCTGCATGTGAA 58.970 42.857 0.00 0.00 0.00 3.18
3751 4833 1.689984 TGACAAAAGCCTGCATGTGA 58.310 45.000 0.00 0.00 0.00 3.58
3752 4834 2.736144 ATGACAAAAGCCTGCATGTG 57.264 45.000 0.00 0.00 0.00 3.21
3753 4835 3.395639 CAAATGACAAAAGCCTGCATGT 58.604 40.909 0.00 0.00 0.00 3.21
3754 4836 2.739913 CCAAATGACAAAAGCCTGCATG 59.260 45.455 0.00 0.00 0.00 4.06
3755 4837 2.872842 GCCAAATGACAAAAGCCTGCAT 60.873 45.455 0.00 0.00 0.00 3.96
3756 4838 1.540797 GCCAAATGACAAAAGCCTGCA 60.541 47.619 0.00 0.00 0.00 4.41
3757 4839 1.150827 GCCAAATGACAAAAGCCTGC 58.849 50.000 0.00 0.00 0.00 4.85
3758 4840 1.799544 GGCCAAATGACAAAAGCCTG 58.200 50.000 0.00 0.00 37.42 4.85
3759 4841 1.720781 AGGCCAAATGACAAAAGCCT 58.279 45.000 5.01 5.99 45.72 4.58
3760 4842 2.549064 AAGGCCAAATGACAAAAGCC 57.451 45.000 5.01 0.00 40.79 4.35
3761 4843 3.732212 AGAAAGGCCAAATGACAAAAGC 58.268 40.909 5.01 0.00 0.00 3.51
3762 4844 7.784633 TTAAAGAAAGGCCAAATGACAAAAG 57.215 32.000 5.01 0.00 0.00 2.27
3763 4845 8.744568 AATTAAAGAAAGGCCAAATGACAAAA 57.255 26.923 5.01 0.00 0.00 2.44
3764 4846 9.838339 TTAATTAAAGAAAGGCCAAATGACAAA 57.162 25.926 5.01 0.00 0.00 2.83
3765 4847 9.267084 GTTAATTAAAGAAAGGCCAAATGACAA 57.733 29.630 5.01 0.00 0.00 3.18
3766 4848 7.596995 CGTTAATTAAAGAAAGGCCAAATGACA 59.403 33.333 5.01 0.00 0.00 3.58
3767 4849 7.597369 ACGTTAATTAAAGAAAGGCCAAATGAC 59.403 33.333 16.60 0.00 0.00 3.06
3768 4850 7.662897 ACGTTAATTAAAGAAAGGCCAAATGA 58.337 30.769 16.60 0.00 0.00 2.57
3776 4858 8.107399 AGAAGGGAACGTTAATTAAAGAAAGG 57.893 34.615 16.60 0.00 36.18 3.11
3871 4956 1.043816 GCTCCTCAGCCTGCTGTATA 58.956 55.000 17.96 4.82 43.96 1.47
3872 4957 1.828768 GCTCCTCAGCCTGCTGTAT 59.171 57.895 17.96 0.00 43.96 2.29
3920 5005 2.328099 GGGCGTGGAACTTGCTCTG 61.328 63.158 0.00 0.00 31.75 3.35
4218 5306 2.510238 CCGAGTGGCTAGCAGCAC 60.510 66.667 18.24 15.93 44.75 4.40
4337 5425 7.523293 TCATGGCTAGATTTTCTTTCACAAA 57.477 32.000 0.00 0.00 0.00 2.83
4352 5440 8.461222 TGACTTCAAAATGTAAATCATGGCTAG 58.539 33.333 0.00 0.00 36.81 3.42
4371 5459 1.611977 CCGACACCTGTACTGACTTCA 59.388 52.381 0.60 0.00 0.00 3.02
4372 5460 1.067776 CCCGACACCTGTACTGACTTC 60.068 57.143 0.60 0.00 0.00 3.01
4482 5571 9.323985 AGACTACTATTCAAGCTTTCAATCATC 57.676 33.333 0.00 0.00 0.00 2.92
4520 5609 4.941263 GTGGCATTGGAAGTATAACAGTGA 59.059 41.667 0.00 0.00 0.00 3.41
4521 5610 4.699735 TGTGGCATTGGAAGTATAACAGTG 59.300 41.667 0.00 0.00 0.00 3.66
4618 5708 2.512515 GCCCGACATGACCTCTGC 60.513 66.667 0.00 0.00 0.00 4.26
4619 5709 0.742281 CAAGCCCGACATGACCTCTG 60.742 60.000 0.00 0.00 0.00 3.35
4620 5710 1.599047 CAAGCCCGACATGACCTCT 59.401 57.895 0.00 0.00 0.00 3.69
4621 5711 2.109126 GCAAGCCCGACATGACCTC 61.109 63.158 0.00 0.00 0.00 3.85
4622 5712 2.045926 GCAAGCCCGACATGACCT 60.046 61.111 0.00 0.00 0.00 3.85
4623 5713 3.499737 CGCAAGCCCGACATGACC 61.500 66.667 0.00 0.00 0.00 4.02
4624 5714 2.434185 TCGCAAGCCCGACATGAC 60.434 61.111 0.00 0.00 31.36 3.06
4632 5722 2.966309 CTTCGTTGGTCGCAAGCCC 61.966 63.158 0.00 0.00 39.67 5.19
4633 5723 1.782028 AACTTCGTTGGTCGCAAGCC 61.782 55.000 0.00 0.00 39.67 4.35
4634 5724 0.384353 GAACTTCGTTGGTCGCAAGC 60.384 55.000 0.00 0.00 39.67 4.01
4635 5725 0.934496 TGAACTTCGTTGGTCGCAAG 59.066 50.000 0.00 0.00 39.67 4.01
4636 5726 1.588674 ATGAACTTCGTTGGTCGCAA 58.411 45.000 0.00 0.00 39.67 4.85
4637 5727 1.262950 CAATGAACTTCGTTGGTCGCA 59.737 47.619 13.89 0.00 39.16 5.10
4638 5728 1.263217 ACAATGAACTTCGTTGGTCGC 59.737 47.619 22.24 0.00 45.20 5.19
4639 5729 3.602390 AACAATGAACTTCGTTGGTCG 57.398 42.857 22.24 3.76 38.88 4.79
4640 5730 4.738252 GGAAAACAATGAACTTCGTTGGTC 59.262 41.667 22.24 16.61 42.05 4.02
4641 5731 4.401202 AGGAAAACAATGAACTTCGTTGGT 59.599 37.500 22.24 16.09 44.55 3.67
4642 5732 4.932146 AGGAAAACAATGAACTTCGTTGG 58.068 39.130 22.24 9.11 45.20 3.77
4643 5733 5.276348 GCAAGGAAAACAATGAACTTCGTTG 60.276 40.000 18.43 18.43 46.08 4.10
4644 5734 4.803613 GCAAGGAAAACAATGAACTTCGTT 59.196 37.500 0.00 0.00 0.00 3.85
4645 5735 4.097892 AGCAAGGAAAACAATGAACTTCGT 59.902 37.500 0.00 0.00 0.00 3.85
4646 5736 4.442073 CAGCAAGGAAAACAATGAACTTCG 59.558 41.667 0.00 0.00 0.00 3.79
4647 5737 4.209911 GCAGCAAGGAAAACAATGAACTTC 59.790 41.667 0.00 0.00 0.00 3.01
4648 5738 4.122046 GCAGCAAGGAAAACAATGAACTT 58.878 39.130 0.00 0.00 0.00 2.66
4649 5739 3.493176 GGCAGCAAGGAAAACAATGAACT 60.493 43.478 0.00 0.00 0.00 3.01
4650 5740 2.802247 GGCAGCAAGGAAAACAATGAAC 59.198 45.455 0.00 0.00 0.00 3.18
4651 5741 2.433604 TGGCAGCAAGGAAAACAATGAA 59.566 40.909 0.00 0.00 0.00 2.57
4652 5742 2.037901 TGGCAGCAAGGAAAACAATGA 58.962 42.857 0.00 0.00 0.00 2.57
4653 5743 2.529780 TGGCAGCAAGGAAAACAATG 57.470 45.000 0.00 0.00 0.00 2.82
4654 5744 2.289819 CCATGGCAGCAAGGAAAACAAT 60.290 45.455 0.00 0.00 0.00 2.71
4655 5745 1.070445 CCATGGCAGCAAGGAAAACAA 59.930 47.619 0.00 0.00 0.00 2.83
4656 5746 0.680618 CCATGGCAGCAAGGAAAACA 59.319 50.000 0.00 0.00 0.00 2.83
4657 5747 0.681175 ACCATGGCAGCAAGGAAAAC 59.319 50.000 13.04 0.00 0.00 2.43
4658 5748 2.300956 TACCATGGCAGCAAGGAAAA 57.699 45.000 13.04 0.00 0.00 2.29
4659 5749 2.101783 CATACCATGGCAGCAAGGAAA 58.898 47.619 13.04 0.00 0.00 3.13
4660 5750 1.284491 TCATACCATGGCAGCAAGGAA 59.716 47.619 13.04 0.00 0.00 3.36
4661 5751 0.918258 TCATACCATGGCAGCAAGGA 59.082 50.000 13.04 0.00 0.00 3.36
4662 5752 1.611977 CATCATACCATGGCAGCAAGG 59.388 52.381 13.04 0.00 0.00 3.61
4663 5753 1.000607 GCATCATACCATGGCAGCAAG 60.001 52.381 13.04 0.00 0.00 4.01
4664 5754 1.034356 GCATCATACCATGGCAGCAA 58.966 50.000 13.04 0.00 0.00 3.91
4665 5755 0.106619 TGCATCATACCATGGCAGCA 60.107 50.000 13.04 10.28 32.42 4.41
4666 5756 0.596577 CTGCATCATACCATGGCAGC 59.403 55.000 13.04 7.65 44.45 5.25
4668 5758 1.202842 CCTCTGCATCATACCATGGCA 60.203 52.381 13.04 0.00 0.00 4.92
4669 5759 1.202855 ACCTCTGCATCATACCATGGC 60.203 52.381 13.04 0.00 0.00 4.40
4670 5760 2.105306 TGACCTCTGCATCATACCATGG 59.895 50.000 11.19 11.19 0.00 3.66
4671 5761 3.400255 CTGACCTCTGCATCATACCATG 58.600 50.000 0.00 0.00 0.00 3.66
4672 5762 2.371179 CCTGACCTCTGCATCATACCAT 59.629 50.000 0.00 0.00 0.00 3.55
4673 5763 1.764723 CCTGACCTCTGCATCATACCA 59.235 52.381 0.00 0.00 0.00 3.25
4674 5764 1.765314 ACCTGACCTCTGCATCATACC 59.235 52.381 0.00 0.00 0.00 2.73
4675 5765 3.201290 CAACCTGACCTCTGCATCATAC 58.799 50.000 0.00 0.00 0.00 2.39
4676 5766 2.171237 CCAACCTGACCTCTGCATCATA 59.829 50.000 0.00 0.00 0.00 2.15
4677 5767 1.064906 CCAACCTGACCTCTGCATCAT 60.065 52.381 0.00 0.00 0.00 2.45
4678 5768 0.325933 CCAACCTGACCTCTGCATCA 59.674 55.000 0.00 0.00 0.00 3.07
4679 5769 0.393537 CCCAACCTGACCTCTGCATC 60.394 60.000 0.00 0.00 0.00 3.91
4680 5770 0.842030 TCCCAACCTGACCTCTGCAT 60.842 55.000 0.00 0.00 0.00 3.96
4681 5771 1.461268 TCCCAACCTGACCTCTGCA 60.461 57.895 0.00 0.00 0.00 4.41
4695 5785 3.502123 AAACAGAAAATCGTCCTCCCA 57.498 42.857 0.00 0.00 0.00 4.37
4729 5819 0.251354 ATCACAATGACGCAGAGGCT 59.749 50.000 0.00 0.00 38.10 4.58
4738 5828 4.320494 GGTGGTTCTGTGAATCACAATGAC 60.320 45.833 17.41 14.32 44.08 3.06
4760 5850 9.921637 TGTTTTAGGCATCAACTTTAATAAAGG 57.078 29.630 16.15 0.94 42.82 3.11
4797 5887 9.037737 TGCCGTAATTGTCTATATTTTGTAGTC 57.962 33.333 0.00 0.00 0.00 2.59
4886 5986 2.624838 CCAACAAAGCACCAGATCAGTT 59.375 45.455 0.00 0.00 0.00 3.16
4888 5988 2.486982 CTCCAACAAAGCACCAGATCAG 59.513 50.000 0.00 0.00 0.00 2.90
4935 6035 5.581126 TTTCAAATCGGAGGGATTGAATG 57.419 39.130 10.04 0.00 44.59 2.67
5004 6105 1.933853 GTGGCTACCATGTGACGAATC 59.066 52.381 0.00 0.00 35.28 2.52
5061 6162 1.257936 CGAAACACCAAGACGACACTG 59.742 52.381 0.00 0.00 0.00 3.66
5063 6164 1.563111 TCGAAACACCAAGACGACAC 58.437 50.000 0.00 0.00 0.00 3.67
5066 6167 0.249573 GGGTCGAAACACCAAGACGA 60.250 55.000 0.00 0.00 38.32 4.20
5068 6169 1.963172 AAGGGTCGAAACACCAAGAC 58.037 50.000 0.00 0.00 38.32 3.01
5080 6181 2.595124 AAACTTTGCCAAAAGGGTCG 57.405 45.000 3.49 0.00 46.01 4.79
5102 6203 2.042464 TCAAAGGGAGATCAGATCCGG 58.958 52.381 6.80 0.00 37.75 5.14
5103 6204 4.348863 AATCAAAGGGAGATCAGATCCG 57.651 45.455 6.80 0.00 37.75 4.18
5104 6205 5.534278 GGAAAATCAAAGGGAGATCAGATCC 59.466 44.000 6.80 0.00 35.99 3.36
5105 6206 6.363882 AGGAAAATCAAAGGGAGATCAGATC 58.636 40.000 1.64 1.64 0.00 2.75
5106 6207 6.338591 AGGAAAATCAAAGGGAGATCAGAT 57.661 37.500 0.00 0.00 0.00 2.90
5107 6208 5.786121 AGGAAAATCAAAGGGAGATCAGA 57.214 39.130 0.00 0.00 0.00 3.27
5108 6209 5.948162 TGAAGGAAAATCAAAGGGAGATCAG 59.052 40.000 0.00 0.00 0.00 2.90
5109 6210 5.891198 TGAAGGAAAATCAAAGGGAGATCA 58.109 37.500 0.00 0.00 0.00 2.92
5110 6211 6.660949 TCTTGAAGGAAAATCAAAGGGAGATC 59.339 38.462 0.00 0.00 36.43 2.75
5111 6212 6.555711 TCTTGAAGGAAAATCAAAGGGAGAT 58.444 36.000 0.00 0.00 36.43 2.75
5112 6213 5.952387 TCTTGAAGGAAAATCAAAGGGAGA 58.048 37.500 0.00 0.00 36.43 3.71
5113 6214 6.662663 AGATCTTGAAGGAAAATCAAAGGGAG 59.337 38.462 0.00 0.00 36.43 4.30
5114 6215 6.435277 CAGATCTTGAAGGAAAATCAAAGGGA 59.565 38.462 0.00 0.00 36.43 4.20
5115 6216 6.435277 TCAGATCTTGAAGGAAAATCAAAGGG 59.565 38.462 0.00 0.00 36.43 3.95
5116 6217 7.311408 GTCAGATCTTGAAGGAAAATCAAAGG 58.689 38.462 0.00 0.00 37.61 3.11
5117 6218 7.311408 GGTCAGATCTTGAAGGAAAATCAAAG 58.689 38.462 0.00 0.00 37.61 2.77
5118 6219 6.209391 GGGTCAGATCTTGAAGGAAAATCAAA 59.791 38.462 0.00 0.00 37.61 2.69
5119 6220 5.711976 GGGTCAGATCTTGAAGGAAAATCAA 59.288 40.000 0.00 0.00 37.61 2.57
5120 6221 5.014544 AGGGTCAGATCTTGAAGGAAAATCA 59.985 40.000 0.00 0.00 37.61 2.57
5121 6222 5.504853 AGGGTCAGATCTTGAAGGAAAATC 58.495 41.667 0.00 0.00 37.61 2.17
5122 6223 5.527026 AGGGTCAGATCTTGAAGGAAAAT 57.473 39.130 0.00 0.00 37.61 1.82
5123 6224 5.324832 AAGGGTCAGATCTTGAAGGAAAA 57.675 39.130 0.00 0.00 37.61 2.29
5124 6225 5.324832 AAAGGGTCAGATCTTGAAGGAAA 57.675 39.130 0.00 0.00 37.61 3.13
5125 6226 5.324832 AAAAGGGTCAGATCTTGAAGGAA 57.675 39.130 0.00 0.00 37.61 3.36
5126 6227 5.316987 GAAAAAGGGTCAGATCTTGAAGGA 58.683 41.667 0.00 0.00 37.61 3.36
5127 6228 4.460731 GGAAAAAGGGTCAGATCTTGAAGG 59.539 45.833 0.00 0.00 37.61 3.46
5128 6229 5.320277 AGGAAAAAGGGTCAGATCTTGAAG 58.680 41.667 0.00 0.00 37.61 3.02
5129 6230 5.324832 AGGAAAAAGGGTCAGATCTTGAA 57.675 39.130 0.00 0.00 37.61 2.69
5130 6231 5.280521 GGTAGGAAAAAGGGTCAGATCTTGA 60.281 44.000 0.00 0.00 0.00 3.02
5131 6232 4.944317 GGTAGGAAAAAGGGTCAGATCTTG 59.056 45.833 0.00 0.00 0.00 3.02
5132 6233 4.601857 TGGTAGGAAAAAGGGTCAGATCTT 59.398 41.667 0.00 0.00 0.00 2.40
5133 6234 4.019231 GTGGTAGGAAAAAGGGTCAGATCT 60.019 45.833 0.00 0.00 0.00 2.75
5134 6235 4.262617 GTGGTAGGAAAAAGGGTCAGATC 58.737 47.826 0.00 0.00 0.00 2.75
5135 6236 3.010250 GGTGGTAGGAAAAAGGGTCAGAT 59.990 47.826 0.00 0.00 0.00 2.90
5136 6237 2.374170 GGTGGTAGGAAAAAGGGTCAGA 59.626 50.000 0.00 0.00 0.00 3.27
5137 6238 2.107552 TGGTGGTAGGAAAAAGGGTCAG 59.892 50.000 0.00 0.00 0.00 3.51
5138 6239 2.136863 TGGTGGTAGGAAAAAGGGTCA 58.863 47.619 0.00 0.00 0.00 4.02
5139 6240 2.511659 GTGGTGGTAGGAAAAAGGGTC 58.488 52.381 0.00 0.00 0.00 4.46
5140 6241 1.146359 GGTGGTGGTAGGAAAAAGGGT 59.854 52.381 0.00 0.00 0.00 4.34
5141 6242 1.549265 GGGTGGTGGTAGGAAAAAGGG 60.549 57.143 0.00 0.00 0.00 3.95
5142 6243 1.884928 CGGGTGGTGGTAGGAAAAAGG 60.885 57.143 0.00 0.00 0.00 3.11
5143 6244 1.072648 TCGGGTGGTGGTAGGAAAAAG 59.927 52.381 0.00 0.00 0.00 2.27
5144 6245 1.138568 TCGGGTGGTGGTAGGAAAAA 58.861 50.000 0.00 0.00 0.00 1.94
5145 6246 0.397564 GTCGGGTGGTGGTAGGAAAA 59.602 55.000 0.00 0.00 0.00 2.29
5146 6247 1.482748 GGTCGGGTGGTGGTAGGAAA 61.483 60.000 0.00 0.00 0.00 3.13
5147 6248 1.914764 GGTCGGGTGGTGGTAGGAA 60.915 63.158 0.00 0.00 0.00 3.36
5148 6249 2.284112 GGTCGGGTGGTGGTAGGA 60.284 66.667 0.00 0.00 0.00 2.94
5149 6250 2.284405 AGGTCGGGTGGTGGTAGG 60.284 66.667 0.00 0.00 0.00 3.18
5150 6251 2.656069 CCAGGTCGGGTGGTGGTAG 61.656 68.421 0.00 0.00 0.00 3.18
5151 6252 2.605295 CCAGGTCGGGTGGTGGTA 60.605 66.667 0.00 0.00 0.00 3.25
5171 6272 1.800286 CGGTAGGTTGCGTTAGGCTAC 60.800 57.143 0.00 3.15 45.08 3.58
5172 6273 0.457035 CGGTAGGTTGCGTTAGGCTA 59.543 55.000 0.00 0.00 44.05 3.93
5173 6274 1.217244 CGGTAGGTTGCGTTAGGCT 59.783 57.895 0.00 0.00 44.05 4.58
5174 6275 2.458610 GCGGTAGGTTGCGTTAGGC 61.459 63.158 0.00 0.00 43.96 3.93
5175 6276 1.812507 GGCGGTAGGTTGCGTTAGG 60.813 63.158 0.00 0.00 0.00 2.69
5176 6277 0.461339 ATGGCGGTAGGTTGCGTTAG 60.461 55.000 0.00 0.00 0.00 2.34
5177 6278 0.741574 CATGGCGGTAGGTTGCGTTA 60.742 55.000 0.00 0.00 0.00 3.18
5178 6279 2.038269 CATGGCGGTAGGTTGCGTT 61.038 57.895 0.00 0.00 0.00 4.84
5179 6280 2.435938 CATGGCGGTAGGTTGCGT 60.436 61.111 0.00 0.00 0.00 5.24
5180 6281 3.876198 GCATGGCGGTAGGTTGCG 61.876 66.667 0.00 0.00 0.00 4.85
5181 6282 3.518068 GGCATGGCGGTAGGTTGC 61.518 66.667 2.41 0.00 0.00 4.17
5182 6283 2.828549 GGGCATGGCGGTAGGTTG 60.829 66.667 13.76 0.00 0.00 3.77
5183 6284 4.123545 GGGGCATGGCGGTAGGTT 62.124 66.667 13.76 0.00 0.00 3.50
5198 6299 2.040935 TTACCCTACCACCGGGGG 59.959 66.667 25.15 25.15 46.40 5.40
5199 6300 2.724273 CGTTACCCTACCACCGGGG 61.724 68.421 6.32 0.00 46.40 5.73
5201 6302 2.724273 CCCGTTACCCTACCACCGG 61.724 68.421 0.00 0.00 35.32 5.28
5202 6303 1.669999 CTCCCGTTACCCTACCACCG 61.670 65.000 0.00 0.00 0.00 4.94
5203 6304 1.332889 CCTCCCGTTACCCTACCACC 61.333 65.000 0.00 0.00 0.00 4.61
5204 6305 1.964608 GCCTCCCGTTACCCTACCAC 61.965 65.000 0.00 0.00 0.00 4.16
5205 6306 1.686800 GCCTCCCGTTACCCTACCA 60.687 63.158 0.00 0.00 0.00 3.25
5206 6307 2.438249 GGCCTCCCGTTACCCTACC 61.438 68.421 0.00 0.00 0.00 3.18
5207 6308 3.224230 GGCCTCCCGTTACCCTAC 58.776 66.667 0.00 0.00 0.00 3.18
5231 6332 2.267961 CAACTAGGGCGGACCACC 59.732 66.667 0.92 0.00 43.89 4.61
5232 6333 1.079336 GTCAACTAGGGCGGACCAC 60.079 63.158 0.92 0.00 43.89 4.16
5233 6334 2.642254 CGTCAACTAGGGCGGACCA 61.642 63.158 0.92 0.00 43.89 4.02
5234 6335 2.183555 CGTCAACTAGGGCGGACC 59.816 66.667 0.00 0.00 40.67 4.46
5235 6336 1.445582 CACGTCAACTAGGGCGGAC 60.446 63.158 0.00 0.00 0.00 4.79
5236 6337 2.642254 CCACGTCAACTAGGGCGGA 61.642 63.158 0.00 0.00 0.00 5.54
5237 6338 1.956629 ATCCACGTCAACTAGGGCGG 61.957 60.000 0.00 0.00 0.00 6.13
5238 6339 0.742505 TATCCACGTCAACTAGGGCG 59.257 55.000 0.00 0.00 0.00 6.13
5239 6340 2.483188 CCTTATCCACGTCAACTAGGGC 60.483 54.545 0.00 0.00 0.00 5.19
5240 6341 2.483188 GCCTTATCCACGTCAACTAGGG 60.483 54.545 0.00 0.00 0.00 3.53
5241 6342 2.167693 TGCCTTATCCACGTCAACTAGG 59.832 50.000 0.00 0.00 0.00 3.02
5242 6343 3.520290 TGCCTTATCCACGTCAACTAG 57.480 47.619 0.00 0.00 0.00 2.57
5243 6344 3.704566 AGATGCCTTATCCACGTCAACTA 59.295 43.478 0.00 0.00 36.40 2.24
5244 6345 2.501723 AGATGCCTTATCCACGTCAACT 59.498 45.455 0.00 0.00 36.40 3.16
5245 6346 2.906354 AGATGCCTTATCCACGTCAAC 58.094 47.619 0.00 0.00 36.40 3.18
5246 6347 3.181469 GGTAGATGCCTTATCCACGTCAA 60.181 47.826 0.00 0.00 36.40 3.18
5247 6348 2.364324 GGTAGATGCCTTATCCACGTCA 59.636 50.000 0.00 0.00 36.40 4.35
5248 6349 2.607282 CGGTAGATGCCTTATCCACGTC 60.607 54.545 0.00 0.00 36.40 4.34
5249 6350 1.340248 CGGTAGATGCCTTATCCACGT 59.660 52.381 0.00 0.00 36.40 4.49
5250 6351 1.935300 GCGGTAGATGCCTTATCCACG 60.935 57.143 0.00 0.00 36.40 4.94
5251 6352 1.344763 AGCGGTAGATGCCTTATCCAC 59.655 52.381 0.00 0.00 36.40 4.02
5252 6353 1.717032 AGCGGTAGATGCCTTATCCA 58.283 50.000 0.00 0.00 36.40 3.41
5253 6354 3.368531 CCTTAGCGGTAGATGCCTTATCC 60.369 52.174 0.00 0.00 36.40 2.59
5254 6355 3.510360 TCCTTAGCGGTAGATGCCTTATC 59.490 47.826 0.00 0.00 35.97 1.75
5255 6356 3.258622 GTCCTTAGCGGTAGATGCCTTAT 59.741 47.826 0.00 0.00 0.00 1.73
5256 6357 2.626743 GTCCTTAGCGGTAGATGCCTTA 59.373 50.000 0.00 0.00 0.00 2.69
5257 6358 1.413077 GTCCTTAGCGGTAGATGCCTT 59.587 52.381 0.00 0.00 0.00 4.35
5258 6359 1.041437 GTCCTTAGCGGTAGATGCCT 58.959 55.000 0.00 0.00 0.00 4.75
5259 6360 0.033642 GGTCCTTAGCGGTAGATGCC 59.966 60.000 0.00 0.00 0.00 4.40
5260 6361 0.033642 GGGTCCTTAGCGGTAGATGC 59.966 60.000 0.00 0.00 0.00 3.91
5261 6362 0.680061 GGGGTCCTTAGCGGTAGATG 59.320 60.000 0.00 0.00 0.00 2.90
5262 6363 0.826672 CGGGGTCCTTAGCGGTAGAT 60.827 60.000 0.00 0.00 0.00 1.98
5263 6364 1.454479 CGGGGTCCTTAGCGGTAGA 60.454 63.158 0.00 0.00 0.00 2.59
5264 6365 1.454479 TCGGGGTCCTTAGCGGTAG 60.454 63.158 0.00 0.00 0.00 3.18
5265 6366 2.682846 TCGGGGTCCTTAGCGGTA 59.317 61.111 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.