Multiple sequence alignment - TraesCS3B01G240300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G240300 chr3B 100.000 5153 0 0 1 5153 379219033 379224185 0.000000e+00 9516
1 TraesCS3B01G240300 chr3D 93.444 2700 110 20 1998 4661 286673327 286675995 0.000000e+00 3943
2 TraesCS3B01G240300 chr3D 93.612 1581 51 16 449 1999 286671569 286673129 0.000000e+00 2314
3 TraesCS3B01G240300 chr3D 93.705 413 24 1 4743 5153 286676376 286676788 7.330000e-173 617
4 TraesCS3B01G240300 chr3A 95.923 2134 67 9 2326 4449 374677497 374679620 0.000000e+00 3441
5 TraesCS3B01G240300 chr3A 93.573 1587 65 16 441 1997 374675385 374676964 0.000000e+00 2331
6 TraesCS3B01G240300 chr3A 92.643 367 23 3 4787 5152 374894426 374894789 4.570000e-145 525
7 TraesCS3B01G240300 chr3A 83.699 319 23 7 1998 2287 374677180 374677498 1.830000e-69 274
8 TraesCS3B01G240300 chr3A 77.778 279 44 17 4885 5153 531947142 531947412 6.910000e-34 156
9 TraesCS3B01G240300 chr3A 95.506 89 4 0 4446 4534 374679925 374680013 5.380000e-30 143
10 TraesCS3B01G240300 chr3A 84.049 163 9 9 4560 4722 374680166 374680311 1.930000e-29 141
11 TraesCS3B01G240300 chr5D 90.493 284 12 5 3 280 449327795 449327521 1.360000e-95 361
12 TraesCS3B01G240300 chr7D 87.179 312 30 8 3 309 102774167 102773861 3.820000e-91 346
13 TraesCS3B01G240300 chr7D 92.727 110 8 0 329 438 102773875 102773766 5.340000e-35 159
14 TraesCS3B01G240300 chr5A 85.993 307 32 9 6 307 14896162 14895862 8.330000e-83 318
15 TraesCS3B01G240300 chr5A 80.833 240 32 13 4903 5132 660803820 660804055 5.300000e-40 176
16 TraesCS3B01G240300 chr4B 85.433 254 12 11 799 1031 399270000 399270249 1.850000e-59 241
17 TraesCS3B01G240300 chr4D 75.941 478 77 28 4660 5107 95519635 95520104 1.450000e-50 211
18 TraesCS3B01G240300 chr2D 77.966 236 27 11 4885 5109 645687351 645687572 1.950000e-24 124
19 TraesCS3B01G240300 chrUn 75.277 271 45 15 4887 5141 135058283 135058019 5.460000e-20 110
20 TraesCS3B01G240300 chrUn 75.277 271 45 15 4887 5141 152655138 152654874 5.460000e-20 110
21 TraesCS3B01G240300 chrUn 75.182 274 46 15 4884 5141 204413321 204413588 5.460000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G240300 chr3B 379219033 379224185 5152 False 9516.000000 9516 100.000 1 5153 1 chr3B.!!$F1 5152
1 TraesCS3B01G240300 chr3D 286671569 286676788 5219 False 2291.333333 3943 93.587 449 5153 3 chr3D.!!$F1 4704
2 TraesCS3B01G240300 chr3A 374675385 374680311 4926 False 1266.000000 3441 90.550 441 4722 5 chr3A.!!$F3 4281

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 242 0.040067 GCTTGTTTCCTGCGTTGGAG 60.040 55.000 0.00 0.00 37.43 3.86 F
437 438 0.107508 ACGTCCCTGCATTGGAGATG 60.108 55.000 6.77 3.93 30.98 2.90 F
816 827 0.389817 CGCAATCCACGTCAGAGGAA 60.390 55.000 0.00 0.00 40.45 3.36 F
1587 1622 1.000274 CTGGTGGTGCTGGCTTTTAAC 60.000 52.381 0.00 0.00 0.00 2.01 F
1962 2000 0.179059 TCATGCACAACTGTCACGGT 60.179 50.000 0.00 0.00 0.00 4.83 F
3764 4056 0.176680 CTCCCATGTGAGAGAACCCG 59.823 60.000 0.00 0.00 34.11 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1302 1336 0.254178 GCCAGAAGCCCAGAAGATGA 59.746 55.000 0.0 0.0 34.35 2.92 R
1575 1610 0.387239 CCTGCACGTTAAAAGCCAGC 60.387 55.000 0.0 0.0 0.00 4.85 R
1942 1980 0.514255 CCGTGACAGTTGTGCATGAG 59.486 55.000 0.0 0.0 0.00 2.90 R
3152 3444 0.614979 ACTTCAAGCCGAGAGCCCTA 60.615 55.000 0.0 0.0 45.47 3.53 R
3948 4240 1.637553 ACTTGGAAGATCCCATGCAGT 59.362 47.619 0.0 0.0 35.03 4.40 R
4709 5790 0.106918 TGTTCGCTGGTTTCCCTTGT 60.107 50.000 0.0 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 4.147449 CGTGGCCGGCATCTGAGA 62.147 66.667 30.85 0.00 0.00 3.27
50 51 2.202987 GTGGCCGGCATCTGAGAG 60.203 66.667 30.85 0.00 0.00 3.20
51 52 2.685017 TGGCCGGCATCTGAGAGT 60.685 61.111 30.85 0.00 0.00 3.24
52 53 2.202987 GGCCGGCATCTGAGAGTG 60.203 66.667 30.85 0.00 0.00 3.51
53 54 2.581354 GCCGGCATCTGAGAGTGT 59.419 61.111 24.80 0.00 0.00 3.55
54 55 1.812922 GCCGGCATCTGAGAGTGTG 60.813 63.158 24.80 0.00 0.00 3.82
55 56 1.153489 CCGGCATCTGAGAGTGTGG 60.153 63.158 0.00 0.00 0.00 4.17
56 57 1.153489 CGGCATCTGAGAGTGTGGG 60.153 63.158 0.00 0.00 0.00 4.61
57 58 1.607801 CGGCATCTGAGAGTGTGGGA 61.608 60.000 0.00 0.00 0.00 4.37
58 59 0.177604 GGCATCTGAGAGTGTGGGAG 59.822 60.000 0.00 0.00 0.00 4.30
59 60 0.901124 GCATCTGAGAGTGTGGGAGT 59.099 55.000 0.00 0.00 0.00 3.85
60 61 1.277557 GCATCTGAGAGTGTGGGAGTT 59.722 52.381 0.00 0.00 0.00 3.01
61 62 2.676463 GCATCTGAGAGTGTGGGAGTTC 60.676 54.545 0.00 0.00 0.00 3.01
62 63 1.248486 TCTGAGAGTGTGGGAGTTCG 58.752 55.000 0.00 0.00 0.00 3.95
63 64 0.244994 CTGAGAGTGTGGGAGTTCGG 59.755 60.000 0.00 0.00 0.00 4.30
64 65 1.079750 GAGAGTGTGGGAGTTCGGC 60.080 63.158 0.00 0.00 0.00 5.54
65 66 1.534235 AGAGTGTGGGAGTTCGGCT 60.534 57.895 0.00 0.00 0.00 5.52
66 67 1.122019 AGAGTGTGGGAGTTCGGCTT 61.122 55.000 0.00 0.00 0.00 4.35
67 68 0.951040 GAGTGTGGGAGTTCGGCTTG 60.951 60.000 0.00 0.00 0.00 4.01
68 69 1.966451 GTGTGGGAGTTCGGCTTGG 60.966 63.158 0.00 0.00 0.00 3.61
69 70 2.144078 TGTGGGAGTTCGGCTTGGA 61.144 57.895 0.00 0.00 0.00 3.53
70 71 1.376037 GTGGGAGTTCGGCTTGGAG 60.376 63.158 0.00 0.00 0.00 3.86
71 72 1.841556 TGGGAGTTCGGCTTGGAGT 60.842 57.895 0.00 0.00 0.00 3.85
72 73 1.375326 GGGAGTTCGGCTTGGAGTT 59.625 57.895 0.00 0.00 0.00 3.01
73 74 0.673956 GGGAGTTCGGCTTGGAGTTC 60.674 60.000 0.00 0.00 0.00 3.01
74 75 0.321996 GGAGTTCGGCTTGGAGTTCT 59.678 55.000 0.00 0.00 0.00 3.01
75 76 1.673329 GGAGTTCGGCTTGGAGTTCTC 60.673 57.143 0.00 0.00 0.00 2.87
76 77 0.321996 AGTTCGGCTTGGAGTTCTCC 59.678 55.000 11.53 11.53 0.00 3.71
77 78 0.321996 GTTCGGCTTGGAGTTCTCCT 59.678 55.000 18.07 0.00 0.00 3.69
78 79 0.608640 TTCGGCTTGGAGTTCTCCTC 59.391 55.000 18.07 8.50 39.67 3.71
85 86 2.802106 GAGTTCTCCTCCGGCTCG 59.198 66.667 0.00 0.00 33.79 5.03
86 87 3.418744 GAGTTCTCCTCCGGCTCGC 62.419 68.421 0.00 0.00 33.79 5.03
87 88 3.453679 GTTCTCCTCCGGCTCGCT 61.454 66.667 0.00 0.00 0.00 4.93
88 89 3.452786 TTCTCCTCCGGCTCGCTG 61.453 66.667 0.00 0.00 0.00 5.18
94 95 3.531207 TCCGGCTCGCTGGATCTG 61.531 66.667 15.25 0.00 45.79 2.90
95 96 3.531207 CCGGCTCGCTGGATCTGA 61.531 66.667 11.34 0.00 45.10 3.27
96 97 2.279120 CGGCTCGCTGGATCTGAC 60.279 66.667 0.00 0.00 0.00 3.51
97 98 2.279120 GGCTCGCTGGATCTGACG 60.279 66.667 0.00 0.00 0.00 4.35
98 99 2.775856 GGCTCGCTGGATCTGACGA 61.776 63.158 0.00 0.00 0.00 4.20
100 101 1.358402 CTCGCTGGATCTGACGAGG 59.642 63.158 18.05 5.81 46.20 4.63
101 102 2.069465 CTCGCTGGATCTGACGAGGG 62.069 65.000 18.05 4.22 46.20 4.30
102 103 2.418910 CGCTGGATCTGACGAGGGT 61.419 63.158 0.00 0.00 0.00 4.34
103 104 1.439644 GCTGGATCTGACGAGGGTC 59.560 63.158 0.00 0.00 43.71 4.46
104 105 1.730487 CTGGATCTGACGAGGGTCG 59.270 63.158 0.00 0.00 46.49 4.79
105 106 0.748367 CTGGATCTGACGAGGGTCGA 60.748 60.000 2.82 0.00 46.49 4.20
106 107 0.106669 TGGATCTGACGAGGGTCGAT 60.107 55.000 2.82 0.00 46.49 3.59
107 108 0.312416 GGATCTGACGAGGGTCGATG 59.688 60.000 2.82 0.00 46.49 3.84
108 109 0.312416 GATCTGACGAGGGTCGATGG 59.688 60.000 2.82 0.00 46.49 3.51
109 110 0.395862 ATCTGACGAGGGTCGATGGT 60.396 55.000 2.82 0.00 46.49 3.55
110 111 0.253894 TCTGACGAGGGTCGATGGTA 59.746 55.000 2.82 0.00 46.49 3.25
111 112 1.133884 TCTGACGAGGGTCGATGGTAT 60.134 52.381 2.82 0.00 46.49 2.73
112 113 1.681793 CTGACGAGGGTCGATGGTATT 59.318 52.381 2.82 0.00 46.49 1.89
113 114 1.407618 TGACGAGGGTCGATGGTATTG 59.592 52.381 2.82 0.00 46.49 1.90
114 115 1.407979 GACGAGGGTCGATGGTATTGT 59.592 52.381 2.82 0.00 43.74 2.71
115 116 1.407979 ACGAGGGTCGATGGTATTGTC 59.592 52.381 2.82 0.00 43.74 3.18
116 117 1.407618 CGAGGGTCGATGGTATTGTCA 59.592 52.381 0.00 0.00 43.74 3.58
117 118 2.159156 CGAGGGTCGATGGTATTGTCAA 60.159 50.000 0.00 0.00 43.74 3.18
118 119 3.458189 GAGGGTCGATGGTATTGTCAAG 58.542 50.000 0.00 0.00 0.00 3.02
119 120 2.170607 AGGGTCGATGGTATTGTCAAGG 59.829 50.000 0.00 0.00 0.00 3.61
120 121 2.561569 GGTCGATGGTATTGTCAAGGG 58.438 52.381 0.00 0.00 0.00 3.95
121 122 2.093128 GGTCGATGGTATTGTCAAGGGT 60.093 50.000 0.00 0.00 0.00 4.34
122 123 2.936498 GTCGATGGTATTGTCAAGGGTG 59.064 50.000 0.00 0.00 0.00 4.61
123 124 2.569853 TCGATGGTATTGTCAAGGGTGT 59.430 45.455 0.00 0.00 0.00 4.16
124 125 2.677836 CGATGGTATTGTCAAGGGTGTG 59.322 50.000 0.00 0.00 0.00 3.82
125 126 2.577606 TGGTATTGTCAAGGGTGTGG 57.422 50.000 0.00 0.00 0.00 4.17
126 127 2.058705 TGGTATTGTCAAGGGTGTGGA 58.941 47.619 0.00 0.00 0.00 4.02
127 128 2.039746 TGGTATTGTCAAGGGTGTGGAG 59.960 50.000 0.00 0.00 0.00 3.86
128 129 2.304761 GGTATTGTCAAGGGTGTGGAGA 59.695 50.000 0.00 0.00 0.00 3.71
129 130 2.867109 ATTGTCAAGGGTGTGGAGAG 57.133 50.000 0.00 0.00 0.00 3.20
130 131 1.507140 TTGTCAAGGGTGTGGAGAGT 58.493 50.000 0.00 0.00 0.00 3.24
131 132 1.507140 TGTCAAGGGTGTGGAGAGTT 58.493 50.000 0.00 0.00 0.00 3.01
132 133 1.416401 TGTCAAGGGTGTGGAGAGTTC 59.584 52.381 0.00 0.00 0.00 3.01
133 134 0.679505 TCAAGGGTGTGGAGAGTTCG 59.320 55.000 0.00 0.00 0.00 3.95
134 135 0.679505 CAAGGGTGTGGAGAGTTCGA 59.320 55.000 0.00 0.00 0.00 3.71
135 136 0.969894 AAGGGTGTGGAGAGTTCGAG 59.030 55.000 0.00 0.00 0.00 4.04
136 137 0.112606 AGGGTGTGGAGAGTTCGAGA 59.887 55.000 0.00 0.00 0.00 4.04
137 138 0.528470 GGGTGTGGAGAGTTCGAGAG 59.472 60.000 0.00 0.00 0.00 3.20
138 139 1.535833 GGTGTGGAGAGTTCGAGAGA 58.464 55.000 0.00 0.00 39.20 3.10
150 151 2.779755 TCGAGAGAAGAGAGCAGAGT 57.220 50.000 0.00 0.00 37.03 3.24
151 152 2.355197 TCGAGAGAAGAGAGCAGAGTG 58.645 52.381 0.00 0.00 37.03 3.51
152 153 2.027653 TCGAGAGAAGAGAGCAGAGTGA 60.028 50.000 0.00 0.00 37.03 3.41
153 154 2.352651 CGAGAGAAGAGAGCAGAGTGAG 59.647 54.545 0.00 0.00 0.00 3.51
154 155 2.094675 AGAGAAGAGAGCAGAGTGAGC 58.905 52.381 0.00 0.00 0.00 4.26
155 156 2.094675 GAGAAGAGAGCAGAGTGAGCT 58.905 52.381 0.00 0.00 46.82 4.09
156 157 1.820519 AGAAGAGAGCAGAGTGAGCTG 59.179 52.381 0.00 0.00 43.58 4.24
157 158 1.818060 GAAGAGAGCAGAGTGAGCTGA 59.182 52.381 0.00 0.00 43.58 4.26
158 159 1.466856 AGAGAGCAGAGTGAGCTGAG 58.533 55.000 0.00 0.00 43.58 3.35
159 160 1.176527 GAGAGCAGAGTGAGCTGAGT 58.823 55.000 0.00 0.00 43.58 3.41
160 161 0.889994 AGAGCAGAGTGAGCTGAGTG 59.110 55.000 0.00 0.00 43.58 3.51
161 162 0.887247 GAGCAGAGTGAGCTGAGTGA 59.113 55.000 0.00 0.00 43.58 3.41
162 163 0.889994 AGCAGAGTGAGCTGAGTGAG 59.110 55.000 0.00 0.00 41.61 3.51
171 172 3.422122 GCTGAGTGAGCTGAGTGAG 57.578 57.895 0.00 0.00 45.21 3.51
172 173 0.108709 GCTGAGTGAGCTGAGTGAGG 60.109 60.000 0.00 0.00 45.21 3.86
173 174 1.543607 CTGAGTGAGCTGAGTGAGGA 58.456 55.000 0.00 0.00 0.00 3.71
174 175 2.101783 CTGAGTGAGCTGAGTGAGGAT 58.898 52.381 0.00 0.00 0.00 3.24
175 176 2.496871 CTGAGTGAGCTGAGTGAGGATT 59.503 50.000 0.00 0.00 0.00 3.01
176 177 2.233186 TGAGTGAGCTGAGTGAGGATTG 59.767 50.000 0.00 0.00 0.00 2.67
177 178 2.495270 GAGTGAGCTGAGTGAGGATTGA 59.505 50.000 0.00 0.00 0.00 2.57
178 179 2.233431 AGTGAGCTGAGTGAGGATTGAC 59.767 50.000 0.00 0.00 0.00 3.18
179 180 2.028658 GTGAGCTGAGTGAGGATTGACA 60.029 50.000 0.00 0.00 0.00 3.58
180 181 2.028658 TGAGCTGAGTGAGGATTGACAC 60.029 50.000 0.00 0.00 37.30 3.67
181 182 1.973515 AGCTGAGTGAGGATTGACACA 59.026 47.619 0.00 0.00 39.18 3.72
182 183 2.028294 AGCTGAGTGAGGATTGACACAG 60.028 50.000 0.00 0.00 39.18 3.66
183 184 2.289320 GCTGAGTGAGGATTGACACAGT 60.289 50.000 0.00 0.00 39.18 3.55
184 185 3.805108 GCTGAGTGAGGATTGACACAGTT 60.805 47.826 0.00 0.00 39.18 3.16
185 186 3.732212 TGAGTGAGGATTGACACAGTTG 58.268 45.455 0.00 0.00 39.18 3.16
186 187 3.070018 GAGTGAGGATTGACACAGTTGG 58.930 50.000 0.00 0.00 39.18 3.77
187 188 1.537202 GTGAGGATTGACACAGTTGGC 59.463 52.381 0.00 0.00 37.05 4.52
188 189 1.168714 GAGGATTGACACAGTTGGCC 58.831 55.000 0.00 0.00 0.00 5.36
189 190 0.606401 AGGATTGACACAGTTGGCCG 60.606 55.000 0.00 0.00 0.00 6.13
190 191 1.586154 GGATTGACACAGTTGGCCGG 61.586 60.000 0.00 0.00 0.00 6.13
191 192 0.889186 GATTGACACAGTTGGCCGGT 60.889 55.000 1.90 0.00 0.00 5.28
192 193 0.467290 ATTGACACAGTTGGCCGGTT 60.467 50.000 1.90 0.00 0.00 4.44
193 194 1.098712 TTGACACAGTTGGCCGGTTC 61.099 55.000 1.90 0.00 0.00 3.62
194 195 2.590575 ACACAGTTGGCCGGTTCG 60.591 61.111 1.90 0.00 0.00 3.95
195 196 2.590575 CACAGTTGGCCGGTTCGT 60.591 61.111 1.90 0.00 0.00 3.85
196 197 2.590575 ACAGTTGGCCGGTTCGTG 60.591 61.111 1.90 0.00 0.00 4.35
197 198 2.590575 CAGTTGGCCGGTTCGTGT 60.591 61.111 1.90 0.00 0.00 4.49
198 199 2.184167 CAGTTGGCCGGTTCGTGTT 61.184 57.895 1.90 0.00 0.00 3.32
199 200 1.890510 AGTTGGCCGGTTCGTGTTC 60.891 57.895 1.90 0.00 0.00 3.18
200 201 2.968156 TTGGCCGGTTCGTGTTCG 60.968 61.111 1.90 0.00 38.55 3.95
201 202 4.973055 TGGCCGGTTCGTGTTCGG 62.973 66.667 1.90 0.00 45.84 4.30
202 203 4.974989 GGCCGGTTCGTGTTCGGT 62.975 66.667 1.90 0.00 44.97 4.69
203 204 2.968697 GCCGGTTCGTGTTCGGTT 60.969 61.111 1.90 0.00 44.97 4.44
204 205 2.932905 CCGGTTCGTGTTCGGTTG 59.067 61.111 0.00 0.00 39.04 3.77
205 206 2.600475 CCGGTTCGTGTTCGGTTGG 61.600 63.158 0.00 0.00 39.04 3.77
206 207 1.592131 CGGTTCGTGTTCGGTTGGA 60.592 57.895 0.00 0.00 37.69 3.53
207 208 0.947180 CGGTTCGTGTTCGGTTGGAT 60.947 55.000 0.00 0.00 37.69 3.41
208 209 0.794473 GGTTCGTGTTCGGTTGGATC 59.206 55.000 0.00 0.00 37.69 3.36
209 210 0.437295 GTTCGTGTTCGGTTGGATCG 59.563 55.000 0.00 0.00 37.69 3.69
210 211 0.314618 TTCGTGTTCGGTTGGATCGA 59.685 50.000 0.00 0.00 37.69 3.59
211 212 0.528924 TCGTGTTCGGTTGGATCGAT 59.471 50.000 0.00 0.00 36.49 3.59
212 213 0.645355 CGTGTTCGGTTGGATCGATG 59.355 55.000 0.54 0.00 36.49 3.84
213 214 1.006832 GTGTTCGGTTGGATCGATGG 58.993 55.000 0.54 0.00 36.49 3.51
214 215 0.107897 TGTTCGGTTGGATCGATGGG 60.108 55.000 0.54 0.00 36.49 4.00
215 216 1.153249 TTCGGTTGGATCGATGGGC 60.153 57.895 0.54 0.00 36.49 5.36
216 217 1.904990 TTCGGTTGGATCGATGGGCA 61.905 55.000 0.54 0.00 36.49 5.36
217 218 2.180204 CGGTTGGATCGATGGGCAC 61.180 63.158 0.54 0.00 0.00 5.01
234 235 0.109597 CACCGATGCTTGTTTCCTGC 60.110 55.000 0.00 0.00 0.00 4.85
235 236 1.135315 CCGATGCTTGTTTCCTGCG 59.865 57.895 0.00 0.00 0.00 5.18
236 237 1.577328 CCGATGCTTGTTTCCTGCGT 61.577 55.000 0.00 0.00 0.00 5.24
237 238 0.238289 CGATGCTTGTTTCCTGCGTT 59.762 50.000 0.00 0.00 0.00 4.84
238 239 1.689959 GATGCTTGTTTCCTGCGTTG 58.310 50.000 0.00 0.00 0.00 4.10
239 240 0.314935 ATGCTTGTTTCCTGCGTTGG 59.685 50.000 0.00 0.00 0.00 3.77
240 241 0.749818 TGCTTGTTTCCTGCGTTGGA 60.750 50.000 0.00 0.00 0.00 3.53
241 242 0.040067 GCTTGTTTCCTGCGTTGGAG 60.040 55.000 0.00 0.00 37.43 3.86
242 243 1.593196 CTTGTTTCCTGCGTTGGAGA 58.407 50.000 0.00 0.00 37.43 3.71
243 244 1.532868 CTTGTTTCCTGCGTTGGAGAG 59.467 52.381 0.00 0.00 37.43 3.20
244 245 0.250295 TGTTTCCTGCGTTGGAGAGG 60.250 55.000 0.00 0.00 37.43 3.69
245 246 1.302511 TTTCCTGCGTTGGAGAGGC 60.303 57.895 0.00 0.00 37.43 4.70
246 247 2.748058 TTTCCTGCGTTGGAGAGGCC 62.748 60.000 0.00 0.00 38.36 5.19
252 253 4.021925 GTTGGAGAGGCCGGCACT 62.022 66.667 30.85 25.89 40.66 4.40
253 254 3.249189 TTGGAGAGGCCGGCACTT 61.249 61.111 30.85 13.50 40.66 3.16
254 255 3.551496 TTGGAGAGGCCGGCACTTG 62.551 63.158 30.85 0.00 40.66 3.16
255 256 3.706373 GGAGAGGCCGGCACTTGA 61.706 66.667 30.85 0.00 0.00 3.02
256 257 2.125350 GAGAGGCCGGCACTTGAG 60.125 66.667 30.85 0.00 0.00 3.02
257 258 2.604686 AGAGGCCGGCACTTGAGA 60.605 61.111 30.85 0.00 0.00 3.27
258 259 2.172483 GAGAGGCCGGCACTTGAGAA 62.172 60.000 30.85 0.00 0.00 2.87
259 260 1.078143 GAGGCCGGCACTTGAGAAT 60.078 57.895 30.85 1.11 0.00 2.40
260 261 1.372087 GAGGCCGGCACTTGAGAATG 61.372 60.000 30.85 0.00 0.00 2.67
261 262 1.675641 GGCCGGCACTTGAGAATGT 60.676 57.895 30.85 0.00 0.00 2.71
262 263 1.648467 GGCCGGCACTTGAGAATGTC 61.648 60.000 30.85 0.98 0.00 3.06
263 264 1.970917 GCCGGCACTTGAGAATGTCG 61.971 60.000 24.80 0.00 43.43 4.35
264 265 0.670546 CCGGCACTTGAGAATGTCGT 60.671 55.000 0.00 0.00 42.28 4.34
265 266 0.716108 CGGCACTTGAGAATGTCGTC 59.284 55.000 0.00 0.00 39.07 4.20
266 267 1.079503 GGCACTTGAGAATGTCGTCC 58.920 55.000 0.00 0.00 0.00 4.79
267 268 0.716108 GCACTTGAGAATGTCGTCCG 59.284 55.000 0.00 0.00 0.00 4.79
268 269 1.350193 CACTTGAGAATGTCGTCCGG 58.650 55.000 0.00 0.00 0.00 5.14
269 270 1.067846 CACTTGAGAATGTCGTCCGGA 60.068 52.381 0.00 0.00 0.00 5.14
270 271 1.616865 ACTTGAGAATGTCGTCCGGAA 59.383 47.619 5.23 0.00 0.00 4.30
271 272 1.993370 CTTGAGAATGTCGTCCGGAAC 59.007 52.381 5.23 1.46 0.00 3.62
301 302 9.686683 AAAAATATAGATAAGCGCCCAATCTAT 57.313 29.630 26.64 26.64 42.65 1.98
302 303 8.894768 AAATATAGATAAGCGCCCAATCTATC 57.105 34.615 26.98 15.11 40.45 2.08
303 304 5.939764 ATAGATAAGCGCCCAATCTATCA 57.060 39.130 21.84 8.48 38.11 2.15
304 305 3.931578 AGATAAGCGCCCAATCTATCAC 58.068 45.455 13.35 0.00 0.00 3.06
305 306 3.580458 AGATAAGCGCCCAATCTATCACT 59.420 43.478 13.35 0.00 0.00 3.41
306 307 2.246719 AAGCGCCCAATCTATCACTC 57.753 50.000 2.29 0.00 0.00 3.51
307 308 0.394565 AGCGCCCAATCTATCACTCC 59.605 55.000 2.29 0.00 0.00 3.85
308 309 0.394565 GCGCCCAATCTATCACTCCT 59.605 55.000 0.00 0.00 0.00 3.69
309 310 1.202698 GCGCCCAATCTATCACTCCTT 60.203 52.381 0.00 0.00 0.00 3.36
310 311 2.746472 GCGCCCAATCTATCACTCCTTT 60.746 50.000 0.00 0.00 0.00 3.11
311 312 3.545703 CGCCCAATCTATCACTCCTTTT 58.454 45.455 0.00 0.00 0.00 2.27
312 313 3.947834 CGCCCAATCTATCACTCCTTTTT 59.052 43.478 0.00 0.00 0.00 1.94
328 329 1.419381 TTTTTCTTTGAGGGGTGCCC 58.581 50.000 0.00 0.00 45.90 5.36
337 338 3.006677 GGGGTGCCCAATCTAGCA 58.993 61.111 9.76 0.00 44.65 3.49
342 343 3.012153 TGCCCAATCTAGCACTCCT 57.988 52.632 0.00 0.00 33.08 3.69
343 344 0.543277 TGCCCAATCTAGCACTCCTG 59.457 55.000 0.00 0.00 33.08 3.86
344 345 0.817229 GCCCAATCTAGCACTCCTGC 60.817 60.000 0.00 0.00 44.63 4.85
352 353 3.257933 GCACTCCTGCGTTGGAAG 58.742 61.111 0.63 0.00 35.43 3.46
353 354 2.970974 GCACTCCTGCGTTGGAAGC 61.971 63.158 0.63 4.27 35.43 3.86
354 355 2.032681 ACTCCTGCGTTGGAAGCC 59.967 61.111 0.63 0.00 35.43 4.35
355 356 2.747855 CTCCTGCGTTGGAAGCCC 60.748 66.667 0.63 0.00 35.43 5.19
356 357 3.551496 CTCCTGCGTTGGAAGCCCA 62.551 63.158 0.63 0.00 41.64 5.36
368 369 2.696187 TGGAAGCCCAAACTTTTACACC 59.304 45.455 0.00 0.00 40.09 4.16
369 370 2.287970 GGAAGCCCAAACTTTTACACCG 60.288 50.000 0.00 0.00 0.00 4.94
370 371 1.324383 AGCCCAAACTTTTACACCGG 58.676 50.000 0.00 0.00 0.00 5.28
371 372 1.034356 GCCCAAACTTTTACACCGGT 58.966 50.000 0.00 0.00 0.00 5.28
372 373 1.269361 GCCCAAACTTTTACACCGGTG 60.269 52.381 32.83 32.83 0.00 4.94
373 374 1.269361 CCCAAACTTTTACACCGGTGC 60.269 52.381 34.26 0.00 0.00 5.01
374 375 1.679153 CCAAACTTTTACACCGGTGCT 59.321 47.619 34.26 22.43 0.00 4.40
375 376 2.287368 CCAAACTTTTACACCGGTGCTC 60.287 50.000 34.26 0.00 0.00 4.26
376 377 1.601166 AACTTTTACACCGGTGCTCC 58.399 50.000 34.26 0.00 0.00 4.70
377 378 0.470766 ACTTTTACACCGGTGCTCCA 59.529 50.000 34.26 15.17 0.00 3.86
378 379 0.872388 CTTTTACACCGGTGCTCCAC 59.128 55.000 34.26 0.00 0.00 4.02
390 391 4.976224 GGTGCTCCACCGTAATTTAATT 57.024 40.909 0.00 0.00 44.95 1.40
391 392 5.319140 GGTGCTCCACCGTAATTTAATTT 57.681 39.130 0.00 0.00 44.95 1.82
392 393 5.716094 GGTGCTCCACCGTAATTTAATTTT 58.284 37.500 0.00 0.00 44.95 1.82
393 394 5.575218 GGTGCTCCACCGTAATTTAATTTTG 59.425 40.000 0.00 0.00 44.95 2.44
394 395 6.153756 GTGCTCCACCGTAATTTAATTTTGT 58.846 36.000 0.00 0.00 0.00 2.83
395 396 6.643360 GTGCTCCACCGTAATTTAATTTTGTT 59.357 34.615 0.00 0.00 0.00 2.83
396 397 7.170151 GTGCTCCACCGTAATTTAATTTTGTTT 59.830 33.333 0.00 0.00 0.00 2.83
397 398 7.711339 TGCTCCACCGTAATTTAATTTTGTTTT 59.289 29.630 0.00 0.00 0.00 2.43
398 399 8.552865 GCTCCACCGTAATTTAATTTTGTTTTT 58.447 29.630 0.00 0.00 0.00 1.94
415 416 3.408288 TTTTTACACAAGCGTCCACAC 57.592 42.857 0.00 0.00 0.00 3.82
416 417 2.025589 TTTACACAAGCGTCCACACA 57.974 45.000 0.00 0.00 0.00 3.72
417 418 1.577468 TTACACAAGCGTCCACACAG 58.423 50.000 0.00 0.00 0.00 3.66
418 419 0.747852 TACACAAGCGTCCACACAGA 59.252 50.000 0.00 0.00 0.00 3.41
419 420 0.810031 ACACAAGCGTCCACACAGAC 60.810 55.000 0.00 0.00 0.00 3.51
425 426 3.456317 GTCCACACAGACGTCCCT 58.544 61.111 13.01 0.00 0.00 4.20
426 427 1.006102 GTCCACACAGACGTCCCTG 60.006 63.158 13.01 10.20 39.93 4.45
427 428 2.357517 CCACACAGACGTCCCTGC 60.358 66.667 13.01 0.00 37.68 4.85
428 429 2.421314 CACACAGACGTCCCTGCA 59.579 61.111 13.01 0.00 37.68 4.41
429 430 1.004560 CACACAGACGTCCCTGCAT 60.005 57.895 13.01 0.00 37.68 3.96
430 431 0.603707 CACACAGACGTCCCTGCATT 60.604 55.000 13.01 0.00 37.68 3.56
431 432 0.603707 ACACAGACGTCCCTGCATTG 60.604 55.000 13.01 4.45 37.68 2.82
432 433 1.003355 ACAGACGTCCCTGCATTGG 60.003 57.895 13.01 0.00 37.68 3.16
433 434 1.296392 CAGACGTCCCTGCATTGGA 59.704 57.895 13.01 1.09 0.00 3.53
434 435 0.742281 CAGACGTCCCTGCATTGGAG 60.742 60.000 13.01 0.00 30.98 3.86
435 436 0.904865 AGACGTCCCTGCATTGGAGA 60.905 55.000 13.01 0.00 30.98 3.71
436 437 0.179000 GACGTCCCTGCATTGGAGAT 59.821 55.000 3.51 0.00 30.98 2.75
437 438 0.107508 ACGTCCCTGCATTGGAGATG 60.108 55.000 6.77 3.93 30.98 2.90
438 439 0.107508 CGTCCCTGCATTGGAGATGT 60.108 55.000 6.77 0.00 30.98 3.06
439 440 1.673168 GTCCCTGCATTGGAGATGTC 58.327 55.000 6.77 0.00 30.98 3.06
440 441 0.548031 TCCCTGCATTGGAGATGTCC 59.452 55.000 6.77 0.83 44.24 4.02
441 442 0.549950 CCCTGCATTGGAGATGTCCT 59.450 55.000 10.72 0.00 44.30 3.85
442 443 1.770658 CCCTGCATTGGAGATGTCCTA 59.229 52.381 10.72 2.53 44.30 2.94
443 444 2.173356 CCCTGCATTGGAGATGTCCTAA 59.827 50.000 10.72 3.54 44.30 2.69
444 445 3.474600 CCTGCATTGGAGATGTCCTAAG 58.525 50.000 10.72 0.60 44.30 2.18
445 446 2.877168 CTGCATTGGAGATGTCCTAAGC 59.123 50.000 12.45 12.45 44.30 3.09
446 447 2.225467 GCATTGGAGATGTCCTAAGCC 58.775 52.381 10.72 0.00 44.30 4.35
447 448 2.158696 GCATTGGAGATGTCCTAAGCCT 60.159 50.000 10.72 0.00 44.30 4.58
531 535 1.131638 ATTGCCGGCAATCTAGGAGA 58.868 50.000 41.98 20.91 42.32 3.71
621 625 3.414700 GTGTTGACCCTCGCTGCG 61.415 66.667 17.25 17.25 0.00 5.18
769 773 4.003822 CGCGAAGAAAACAAAACAAAACG 58.996 39.130 0.00 0.00 0.00 3.60
772 776 5.721690 GCGAAGAAAACAAAACAAAACGAAG 59.278 36.000 0.00 0.00 0.00 3.79
773 777 6.399144 GCGAAGAAAACAAAACAAAACGAAGA 60.399 34.615 0.00 0.00 0.00 2.87
774 778 7.157699 CGAAGAAAACAAAACAAAACGAAGAG 58.842 34.615 0.00 0.00 0.00 2.85
776 780 7.796958 AGAAAACAAAACAAAACGAAGAGAG 57.203 32.000 0.00 0.00 0.00 3.20
778 782 8.244113 AGAAAACAAAACAAAACGAAGAGAGAT 58.756 29.630 0.00 0.00 0.00 2.75
779 783 8.757164 AAAACAAAACAAAACGAAGAGAGATT 57.243 26.923 0.00 0.00 0.00 2.40
816 827 0.389817 CGCAATCCACGTCAGAGGAA 60.390 55.000 0.00 0.00 40.45 3.36
985 1016 3.000080 GAACTGGTCGCGCGTTCTG 62.000 63.158 30.98 25.19 35.40 3.02
996 1027 1.869690 GCGTTCTGCAAGGTTCTCC 59.130 57.895 0.00 0.00 45.45 3.71
1291 1325 1.205055 GTCTTTTCTCCGATCCCCCT 58.795 55.000 0.00 0.00 0.00 4.79
1302 1336 2.158608 CCGATCCCCCTTGCTTAATCTT 60.159 50.000 0.00 0.00 0.00 2.40
1324 1358 1.077858 CTTCTGGGCTTCTGGCTCC 60.078 63.158 0.00 0.00 41.66 4.70
1428 1462 6.098838 TCAACATGTGCTGGAGTAAGAGATAT 59.901 38.462 0.00 0.00 0.00 1.63
1468 1503 1.977009 GTGGGCACTTTGGGTAGGC 60.977 63.158 0.00 0.00 0.00 3.93
1518 1553 6.618287 TCATTTATTGCCATGTACTACTGC 57.382 37.500 0.00 0.00 0.00 4.40
1534 1569 3.807538 GCCATGGCTGTGACGCTG 61.808 66.667 29.98 0.00 38.26 5.18
1587 1622 1.000274 CTGGTGGTGCTGGCTTTTAAC 60.000 52.381 0.00 0.00 0.00 2.01
1808 1843 3.703001 TTTGTTCCTCTCAGGTGGATC 57.297 47.619 0.00 0.00 36.53 3.36
1814 1849 5.103473 TGTTCCTCTCAGGTGGATCTACTAT 60.103 44.000 9.27 0.00 36.53 2.12
1862 1897 2.303022 TCTGGTGAGTCCATTTCAGTCC 59.697 50.000 0.00 0.00 46.12 3.85
1871 1906 5.846203 AGTCCATTTCAGTCCAATTTGTTG 58.154 37.500 0.00 0.00 0.00 3.33
1875 1910 5.358922 CATTTCAGTCCAATTTGTTGTGGT 58.641 37.500 0.00 0.00 36.23 4.16
1877 1912 2.616376 TCAGTCCAATTTGTTGTGGTCG 59.384 45.455 0.00 0.00 36.23 4.79
1942 1980 7.436673 AGCTTCGTATCATTGTTATCTCAAGTC 59.563 37.037 0.00 0.00 0.00 3.01
1962 2000 0.179059 TCATGCACAACTGTCACGGT 60.179 50.000 0.00 0.00 0.00 4.83
1984 2022 6.033196 CGGTTATAAAGTGTCAACGTCAGTAG 59.967 42.308 0.00 0.00 0.00 2.57
1987 2025 9.778993 GTTATAAAGTGTCAACGTCAGTAGATA 57.221 33.333 0.00 0.00 0.00 1.98
2011 2264 9.851686 ATACTGTAATAAGGCTTGATTTCATCA 57.148 29.630 10.69 2.52 37.55 3.07
2026 2279 3.159213 TCATCAACCTCCAGCAATTGT 57.841 42.857 7.40 0.00 0.00 2.71
2045 2298 9.023967 GCAATTGTTGAACTTGGATATTATCAC 57.976 33.333 7.40 0.00 0.00 3.06
2059 2312 8.785946 TGGATATTATCACGTATCTTGTTACGA 58.214 33.333 15.32 0.00 46.02 3.43
2068 2321 5.517770 ACGTATCTTGTTACGAAAGGCATAC 59.482 40.000 15.32 0.00 46.02 2.39
2102 2355 3.618351 CGTCTATCCGGATATGTAGGGT 58.382 50.000 24.22 0.00 0.00 4.34
2121 2374 7.762615 TGTAGGGTCTATTTCGTATTTTGTGAG 59.237 37.037 0.00 0.00 0.00 3.51
2132 2385 7.181143 TCGTATTTTGTGAGTTACTTTGACC 57.819 36.000 0.00 0.00 0.00 4.02
2133 2386 6.762187 TCGTATTTTGTGAGTTACTTTGACCA 59.238 34.615 0.00 0.00 0.00 4.02
2397 2679 3.976793 ACTTGATGACTGTTGTGCTTG 57.023 42.857 0.00 0.00 0.00 4.01
2399 2681 3.313526 ACTTGATGACTGTTGTGCTTGTC 59.686 43.478 0.00 0.00 0.00 3.18
2400 2682 1.866601 TGATGACTGTTGTGCTTGTCG 59.133 47.619 0.00 0.00 32.64 4.35
2414 2696 1.002468 CTTGTCGTTTGTCCAAGGCTG 60.002 52.381 0.00 0.00 33.57 4.85
2496 2778 5.465390 TCCTAGTTCAAATGACACGAGTTTG 59.535 40.000 0.00 0.00 34.90 2.93
2500 2782 7.672983 AGTTCAAATGACACGAGTTTGATAT 57.327 32.000 3.45 0.00 40.37 1.63
2501 2783 8.099364 AGTTCAAATGACACGAGTTTGATATT 57.901 30.769 3.45 0.00 40.37 1.28
2743 3025 0.383949 TTGCCTGGTTTCTTGTTCGC 59.616 50.000 0.00 0.00 0.00 4.70
2848 3133 2.295349 CAGCTTGGTGTTCAGCTCATTT 59.705 45.455 3.76 0.00 35.17 2.32
2906 3192 6.073112 GCCTGGTACGTTATTCACTTAAACAA 60.073 38.462 0.00 0.00 0.00 2.83
3021 3307 7.459795 TGGTGCTTATTGAAATTGTATGACA 57.540 32.000 0.00 0.00 0.00 3.58
3054 3340 7.879677 TGATATATGGAAGCCTTACAATGACTG 59.120 37.037 0.00 0.00 0.00 3.51
3075 3361 2.749076 GCTCTGTTGTCATGTTATGCCA 59.251 45.455 0.00 0.00 0.00 4.92
3079 3365 3.758023 CTGTTGTCATGTTATGCCAAGGA 59.242 43.478 0.00 0.00 27.69 3.36
3085 3371 3.776969 TCATGTTATGCCAAGGAGAGTCT 59.223 43.478 0.00 0.00 0.00 3.24
3134 3426 2.969821 TTTAAAGCTGCAAGGGGAGA 57.030 45.000 1.02 0.00 33.71 3.71
3152 3444 6.388394 AGGGGAGATTGAGTTTAAGCTAGATT 59.612 38.462 0.00 0.00 0.00 2.40
3157 3449 7.220740 AGATTGAGTTTAAGCTAGATTAGGGC 58.779 38.462 0.05 0.00 0.00 5.19
3166 3458 2.243810 CTAGATTAGGGCTCTCGGCTT 58.756 52.381 0.00 0.00 41.46 4.35
3174 3466 0.519077 GGCTCTCGGCTTGAAGTTTG 59.481 55.000 0.00 0.00 41.46 2.93
3186 3478 5.456265 GCTTGAAGTTTGTTCTGGATTCTC 58.544 41.667 0.00 0.00 0.00 2.87
3254 3546 3.749226 TGCCAAATGTGTGACATGACTA 58.251 40.909 0.00 0.00 37.97 2.59
3468 3760 2.640346 TAGTTAATGTGCTGCGTCGA 57.360 45.000 0.00 0.00 0.00 4.20
3529 3821 9.702726 CATACAGGTATGTCTTTTTGTATTTCG 57.297 33.333 10.56 0.00 41.01 3.46
3537 3829 4.037089 GTCTTTTTGTATTTCGTGGTGGGT 59.963 41.667 0.00 0.00 0.00 4.51
3585 3877 2.795231 ATGTATGCTCAGTGGTGCTT 57.205 45.000 9.69 6.62 34.68 3.91
3642 3934 4.079253 GACCAAAACTGAGCCATAAGGAA 58.921 43.478 0.00 0.00 36.89 3.36
3644 3936 5.086621 ACCAAAACTGAGCCATAAGGAATT 58.913 37.500 0.00 0.00 36.89 2.17
3646 3938 6.723977 ACCAAAACTGAGCCATAAGGAATTAA 59.276 34.615 0.00 0.00 36.89 1.40
3647 3939 7.093771 ACCAAAACTGAGCCATAAGGAATTAAG 60.094 37.037 0.00 0.00 36.89 1.85
3648 3940 7.260603 CAAAACTGAGCCATAAGGAATTAAGG 58.739 38.462 0.00 0.00 36.89 2.69
3649 3941 5.975988 ACTGAGCCATAAGGAATTAAGGA 57.024 39.130 0.00 0.00 36.89 3.36
3650 3942 5.685728 ACTGAGCCATAAGGAATTAAGGAC 58.314 41.667 0.00 0.00 36.89 3.85
3651 3943 5.430089 ACTGAGCCATAAGGAATTAAGGACT 59.570 40.000 0.00 0.00 36.89 3.85
3688 3980 4.513198 TTTGCCTGTTACCAATTGTAGC 57.487 40.909 4.43 0.56 0.00 3.58
3693 3985 4.217550 GCCTGTTACCAATTGTAGCTTGAA 59.782 41.667 4.43 0.00 32.34 2.69
3764 4056 0.176680 CTCCCATGTGAGAGAACCCG 59.823 60.000 0.00 0.00 34.11 5.28
3948 4240 5.603395 TGTACCCATATTCCTTTCATACCGA 59.397 40.000 0.00 0.00 0.00 4.69
4035 4327 0.773644 AGGTGATGCCCAGACAAGTT 59.226 50.000 0.00 0.00 38.26 2.66
4080 4372 3.349927 TGAGATGAAGCCCATTGAACAG 58.650 45.455 0.00 0.00 35.17 3.16
4104 4396 3.446442 AACTTGAAGGAGCACATGGAT 57.554 42.857 0.00 0.00 0.00 3.41
4137 4429 1.750018 CCACCAGCATGCATCCGAA 60.750 57.895 21.98 0.00 31.97 4.30
4183 4475 2.435372 TGGGGCGCAAGATTAGATTT 57.565 45.000 10.83 0.00 43.02 2.17
4224 4516 3.491964 CGTGTGACCTTGTTCCTTCTGTA 60.492 47.826 0.00 0.00 0.00 2.74
4301 4593 0.680061 GGTGGGATCGCTAGTTAGGG 59.320 60.000 11.46 0.00 37.58 3.53
4328 4620 3.056678 TGGGCATGTTTGACATAGCAAAG 60.057 43.478 13.41 0.00 36.53 2.77
4345 4637 1.047801 AAGGGTGGTGGTTCAAATGC 58.952 50.000 0.00 0.00 0.00 3.56
4444 4736 4.892934 TCCTTTTTAAAGAGAGCTTTGGCA 59.107 37.500 7.30 0.00 43.84 4.92
4512 5111 7.415653 GGGTTCAATTCCTAGAATTGATGTGTC 60.416 40.741 25.35 15.78 43.62 3.67
4546 5286 7.462571 TTTTATTCCTTAAGGACCAAGCTTC 57.537 36.000 24.21 0.00 45.39 3.86
4552 5292 0.250901 AAGGACCAAGCTTCGTGCAT 60.251 50.000 17.24 3.02 45.94 3.96
4553 5293 0.674895 AGGACCAAGCTTCGTGCATC 60.675 55.000 17.24 0.00 45.94 3.91
4604 5344 9.581099 TTGGTACTCATGAAAAGAAAAAGAAAC 57.419 29.630 0.00 0.00 0.00 2.78
4634 5374 1.680555 GGTTTCATGTATGGCGGGACA 60.681 52.381 0.00 0.00 0.00 4.02
4638 5378 0.732571 CATGTATGGCGGGACAACAC 59.267 55.000 0.00 0.00 0.00 3.32
4648 5388 2.486203 GCGGGACAACACATCAACATAA 59.514 45.455 0.00 0.00 0.00 1.90
4700 5781 0.967803 CTCGCGCGAATGTTTTGTTC 59.032 50.000 33.99 0.00 0.00 3.18
4701 5782 0.384974 TCGCGCGAATGTTTTGTTCC 60.385 50.000 32.97 0.00 0.00 3.62
4702 5783 1.334288 CGCGCGAATGTTTTGTTCCC 61.334 55.000 28.94 0.00 0.00 3.97
4703 5784 0.039527 GCGCGAATGTTTTGTTCCCT 60.040 50.000 12.10 0.00 0.00 4.20
4704 5785 1.198178 GCGCGAATGTTTTGTTCCCTA 59.802 47.619 12.10 0.00 0.00 3.53
4705 5786 2.159435 GCGCGAATGTTTTGTTCCCTAT 60.159 45.455 12.10 0.00 0.00 2.57
4706 5787 3.425404 CGCGAATGTTTTGTTCCCTATG 58.575 45.455 0.00 0.00 0.00 2.23
4707 5788 3.730662 CGCGAATGTTTTGTTCCCTATGG 60.731 47.826 0.00 0.00 0.00 2.74
4708 5789 3.428862 GCGAATGTTTTGTTCCCTATGGG 60.429 47.826 0.00 0.00 46.11 4.00
4734 5815 2.433436 GGAAACCAGCGAACAATAGGT 58.567 47.619 0.00 0.00 0.00 3.08
4735 5816 2.418976 GGAAACCAGCGAACAATAGGTC 59.581 50.000 0.00 0.00 0.00 3.85
4736 5817 2.109425 AACCAGCGAACAATAGGTCC 57.891 50.000 0.00 0.00 0.00 4.46
4737 5818 1.276622 ACCAGCGAACAATAGGTCCT 58.723 50.000 0.00 0.00 0.00 3.85
4738 5819 1.207329 ACCAGCGAACAATAGGTCCTC 59.793 52.381 0.00 0.00 0.00 3.71
4739 5820 1.473434 CCAGCGAACAATAGGTCCTCC 60.473 57.143 0.00 0.00 0.00 4.30
4741 5822 1.757699 AGCGAACAATAGGTCCTCCTC 59.242 52.381 0.00 0.00 43.94 3.71
4769 5850 0.602638 TGTTTCAGCGCGACCTCATT 60.603 50.000 12.10 0.00 0.00 2.57
4771 5852 0.796312 TTTCAGCGCGACCTCATTTC 59.204 50.000 12.10 0.00 0.00 2.17
4836 5917 4.041567 TCTTGAGCCTGGATGTTTCTACAA 59.958 41.667 0.00 0.00 37.91 2.41
4838 5919 3.582647 TGAGCCTGGATGTTTCTACAAGA 59.417 43.478 0.00 0.00 37.91 3.02
4846 5927 7.255590 CCTGGATGTTTCTACAAGACAAATTGT 60.256 37.037 0.00 0.00 45.19 2.71
4904 5985 7.382218 CACAATTAAAAACTGCCACCTCTTTAG 59.618 37.037 0.00 0.00 0.00 1.85
4914 5995 6.948309 ACTGCCACCTCTTTAGATAAAAATGT 59.052 34.615 0.00 0.00 0.00 2.71
4997 6078 7.680442 TGTCATGCTACTTTATAAAACTGCA 57.320 32.000 15.92 15.92 0.00 4.41
5090 6173 4.381932 CCATCCTCCCAACACTAAAAATGC 60.382 45.833 0.00 0.00 0.00 3.56
5105 6188 6.837568 ACTAAAAATGCCATCCTCTCAATGAT 59.162 34.615 0.00 0.00 0.00 2.45
5124 6207 5.378230 TGATAAAGTGCCATCCTCTCAAT 57.622 39.130 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.147449 TCTCAGATGCCGGCCACG 62.147 66.667 26.77 10.13 40.55 4.94
33 34 2.202987 CTCTCAGATGCCGGCCAC 60.203 66.667 26.77 17.97 0.00 5.01
34 35 2.685017 ACTCTCAGATGCCGGCCA 60.685 61.111 26.77 12.96 0.00 5.36
35 36 2.202987 CACTCTCAGATGCCGGCC 60.203 66.667 26.77 9.73 0.00 6.13
36 37 1.812922 CACACTCTCAGATGCCGGC 60.813 63.158 22.73 22.73 0.00 6.13
37 38 1.153489 CCACACTCTCAGATGCCGG 60.153 63.158 0.00 0.00 0.00 6.13
38 39 1.153489 CCCACACTCTCAGATGCCG 60.153 63.158 0.00 0.00 0.00 5.69
39 40 0.177604 CTCCCACACTCTCAGATGCC 59.822 60.000 0.00 0.00 0.00 4.40
40 41 0.901124 ACTCCCACACTCTCAGATGC 59.099 55.000 0.00 0.00 0.00 3.91
41 42 2.416566 CGAACTCCCACACTCTCAGATG 60.417 54.545 0.00 0.00 0.00 2.90
42 43 1.821753 CGAACTCCCACACTCTCAGAT 59.178 52.381 0.00 0.00 0.00 2.90
43 44 1.248486 CGAACTCCCACACTCTCAGA 58.752 55.000 0.00 0.00 0.00 3.27
44 45 0.244994 CCGAACTCCCACACTCTCAG 59.755 60.000 0.00 0.00 0.00 3.35
45 46 1.816863 GCCGAACTCCCACACTCTCA 61.817 60.000 0.00 0.00 0.00 3.27
46 47 1.079750 GCCGAACTCCCACACTCTC 60.080 63.158 0.00 0.00 0.00 3.20
47 48 1.122019 AAGCCGAACTCCCACACTCT 61.122 55.000 0.00 0.00 0.00 3.24
48 49 0.951040 CAAGCCGAACTCCCACACTC 60.951 60.000 0.00 0.00 0.00 3.51
49 50 1.071471 CAAGCCGAACTCCCACACT 59.929 57.895 0.00 0.00 0.00 3.55
50 51 1.966451 CCAAGCCGAACTCCCACAC 60.966 63.158 0.00 0.00 0.00 3.82
51 52 2.111999 CTCCAAGCCGAACTCCCACA 62.112 60.000 0.00 0.00 0.00 4.17
52 53 1.376037 CTCCAAGCCGAACTCCCAC 60.376 63.158 0.00 0.00 0.00 4.61
53 54 1.415672 AACTCCAAGCCGAACTCCCA 61.416 55.000 0.00 0.00 0.00 4.37
54 55 0.673956 GAACTCCAAGCCGAACTCCC 60.674 60.000 0.00 0.00 0.00 4.30
55 56 0.321996 AGAACTCCAAGCCGAACTCC 59.678 55.000 0.00 0.00 0.00 3.85
56 57 1.715993 GAGAACTCCAAGCCGAACTC 58.284 55.000 0.00 0.00 0.00 3.01
57 58 3.917072 GAGAACTCCAAGCCGAACT 57.083 52.632 0.00 0.00 0.00 3.01
76 77 3.222855 AGATCCAGCGAGCCGGAG 61.223 66.667 5.05 0.00 33.97 4.63
77 78 3.531207 CAGATCCAGCGAGCCGGA 61.531 66.667 5.05 2.17 35.27 5.14
78 79 3.531207 TCAGATCCAGCGAGCCGG 61.531 66.667 0.00 0.00 0.00 6.13
79 80 2.279120 GTCAGATCCAGCGAGCCG 60.279 66.667 0.00 0.00 0.00 5.52
80 81 2.279120 CGTCAGATCCAGCGAGCC 60.279 66.667 0.00 0.00 0.00 4.70
81 82 1.299014 CTCGTCAGATCCAGCGAGC 60.299 63.158 14.44 0.00 43.02 5.03
82 83 1.358402 CCTCGTCAGATCCAGCGAG 59.642 63.158 17.88 17.88 46.99 5.03
83 84 2.121538 CCCTCGTCAGATCCAGCGA 61.122 63.158 0.00 0.00 0.00 4.93
84 85 2.343163 GACCCTCGTCAGATCCAGCG 62.343 65.000 0.00 0.00 38.99 5.18
85 86 1.439644 GACCCTCGTCAGATCCAGC 59.560 63.158 0.00 0.00 38.99 4.85
86 87 0.748367 TCGACCCTCGTCAGATCCAG 60.748 60.000 0.00 0.00 41.35 3.86
87 88 0.106669 ATCGACCCTCGTCAGATCCA 60.107 55.000 0.00 0.00 41.35 3.41
88 89 0.312416 CATCGACCCTCGTCAGATCC 59.688 60.000 0.00 0.00 41.35 3.36
89 90 0.312416 CCATCGACCCTCGTCAGATC 59.688 60.000 0.00 0.00 41.35 2.75
90 91 0.395862 ACCATCGACCCTCGTCAGAT 60.396 55.000 0.00 0.00 41.35 2.90
91 92 0.253894 TACCATCGACCCTCGTCAGA 59.746 55.000 0.00 0.00 41.35 3.27
92 93 1.319541 ATACCATCGACCCTCGTCAG 58.680 55.000 0.00 0.00 41.35 3.51
93 94 1.407618 CAATACCATCGACCCTCGTCA 59.592 52.381 0.00 0.00 41.35 4.35
94 95 1.407979 ACAATACCATCGACCCTCGTC 59.592 52.381 0.00 0.00 41.35 4.20
95 96 1.407979 GACAATACCATCGACCCTCGT 59.592 52.381 0.00 0.00 41.35 4.18
96 97 1.407618 TGACAATACCATCGACCCTCG 59.592 52.381 0.00 0.00 42.10 4.63
97 98 3.458189 CTTGACAATACCATCGACCCTC 58.542 50.000 0.00 0.00 0.00 4.30
98 99 2.170607 CCTTGACAATACCATCGACCCT 59.829 50.000 0.00 0.00 0.00 4.34
99 100 2.561569 CCTTGACAATACCATCGACCC 58.438 52.381 0.00 0.00 0.00 4.46
100 101 2.093128 ACCCTTGACAATACCATCGACC 60.093 50.000 0.00 0.00 0.00 4.79
101 102 2.936498 CACCCTTGACAATACCATCGAC 59.064 50.000 0.00 0.00 0.00 4.20
102 103 2.569853 ACACCCTTGACAATACCATCGA 59.430 45.455 0.00 0.00 0.00 3.59
103 104 2.677836 CACACCCTTGACAATACCATCG 59.322 50.000 0.00 0.00 0.00 3.84
104 105 3.016736 CCACACCCTTGACAATACCATC 58.983 50.000 0.00 0.00 0.00 3.51
105 106 2.647299 TCCACACCCTTGACAATACCAT 59.353 45.455 0.00 0.00 0.00 3.55
106 107 2.039746 CTCCACACCCTTGACAATACCA 59.960 50.000 0.00 0.00 0.00 3.25
107 108 2.304761 TCTCCACACCCTTGACAATACC 59.695 50.000 0.00 0.00 0.00 2.73
108 109 3.008049 ACTCTCCACACCCTTGACAATAC 59.992 47.826 0.00 0.00 0.00 1.89
109 110 3.248024 ACTCTCCACACCCTTGACAATA 58.752 45.455 0.00 0.00 0.00 1.90
110 111 2.057922 ACTCTCCACACCCTTGACAAT 58.942 47.619 0.00 0.00 0.00 2.71
111 112 1.507140 ACTCTCCACACCCTTGACAA 58.493 50.000 0.00 0.00 0.00 3.18
112 113 1.416401 GAACTCTCCACACCCTTGACA 59.584 52.381 0.00 0.00 0.00 3.58
113 114 1.605712 CGAACTCTCCACACCCTTGAC 60.606 57.143 0.00 0.00 0.00 3.18
114 115 0.679505 CGAACTCTCCACACCCTTGA 59.320 55.000 0.00 0.00 0.00 3.02
115 116 0.679505 TCGAACTCTCCACACCCTTG 59.320 55.000 0.00 0.00 0.00 3.61
116 117 0.969894 CTCGAACTCTCCACACCCTT 59.030 55.000 0.00 0.00 0.00 3.95
117 118 0.112606 TCTCGAACTCTCCACACCCT 59.887 55.000 0.00 0.00 0.00 4.34
118 119 0.528470 CTCTCGAACTCTCCACACCC 59.472 60.000 0.00 0.00 0.00 4.61
119 120 1.535833 TCTCTCGAACTCTCCACACC 58.464 55.000 0.00 0.00 0.00 4.16
120 121 2.814919 TCTTCTCTCGAACTCTCCACAC 59.185 50.000 0.00 0.00 0.00 3.82
121 122 3.078097 CTCTTCTCTCGAACTCTCCACA 58.922 50.000 0.00 0.00 0.00 4.17
122 123 3.340034 TCTCTTCTCTCGAACTCTCCAC 58.660 50.000 0.00 0.00 0.00 4.02
123 124 3.605634 CTCTCTTCTCTCGAACTCTCCA 58.394 50.000 0.00 0.00 0.00 3.86
124 125 2.354821 GCTCTCTTCTCTCGAACTCTCC 59.645 54.545 0.00 0.00 0.00 3.71
125 126 3.006940 TGCTCTCTTCTCTCGAACTCTC 58.993 50.000 0.00 0.00 0.00 3.20
126 127 3.009723 CTGCTCTCTTCTCTCGAACTCT 58.990 50.000 0.00 0.00 0.00 3.24
127 128 3.006940 TCTGCTCTCTTCTCTCGAACTC 58.993 50.000 0.00 0.00 0.00 3.01
128 129 3.009723 CTCTGCTCTCTTCTCTCGAACT 58.990 50.000 0.00 0.00 0.00 3.01
129 130 2.747446 ACTCTGCTCTCTTCTCTCGAAC 59.253 50.000 0.00 0.00 0.00 3.95
130 131 2.746904 CACTCTGCTCTCTTCTCTCGAA 59.253 50.000 0.00 0.00 0.00 3.71
131 132 2.027653 TCACTCTGCTCTCTTCTCTCGA 60.028 50.000 0.00 0.00 0.00 4.04
132 133 2.352651 CTCACTCTGCTCTCTTCTCTCG 59.647 54.545 0.00 0.00 0.00 4.04
133 134 2.098117 GCTCACTCTGCTCTCTTCTCTC 59.902 54.545 0.00 0.00 0.00 3.20
134 135 2.094675 GCTCACTCTGCTCTCTTCTCT 58.905 52.381 0.00 0.00 0.00 3.10
135 136 2.094675 AGCTCACTCTGCTCTCTTCTC 58.905 52.381 0.00 0.00 35.67 2.87
136 137 1.820519 CAGCTCACTCTGCTCTCTTCT 59.179 52.381 0.00 0.00 38.92 2.85
137 138 1.818060 TCAGCTCACTCTGCTCTCTTC 59.182 52.381 0.00 0.00 38.92 2.87
138 139 1.820519 CTCAGCTCACTCTGCTCTCTT 59.179 52.381 0.00 0.00 38.92 2.85
139 140 1.272092 ACTCAGCTCACTCTGCTCTCT 60.272 52.381 0.00 0.00 38.92 3.10
140 141 1.135315 CACTCAGCTCACTCTGCTCTC 60.135 57.143 0.00 0.00 38.92 3.20
141 142 0.889994 CACTCAGCTCACTCTGCTCT 59.110 55.000 0.00 0.00 38.92 4.09
142 143 0.887247 TCACTCAGCTCACTCTGCTC 59.113 55.000 0.00 0.00 38.92 4.26
143 144 0.889994 CTCACTCAGCTCACTCTGCT 59.110 55.000 0.00 0.00 42.06 4.24
144 145 0.737019 GCTCACTCAGCTCACTCTGC 60.737 60.000 0.00 0.00 45.83 4.26
145 146 3.422122 GCTCACTCAGCTCACTCTG 57.578 57.895 0.00 0.00 45.83 3.35
154 155 1.543607 TCCTCACTCAGCTCACTCAG 58.456 55.000 0.00 0.00 0.00 3.35
155 156 2.228545 ATCCTCACTCAGCTCACTCA 57.771 50.000 0.00 0.00 0.00 3.41
156 157 2.495270 TCAATCCTCACTCAGCTCACTC 59.505 50.000 0.00 0.00 0.00 3.51
157 158 2.233431 GTCAATCCTCACTCAGCTCACT 59.767 50.000 0.00 0.00 0.00 3.41
158 159 2.028658 TGTCAATCCTCACTCAGCTCAC 60.029 50.000 0.00 0.00 0.00 3.51
159 160 2.028658 GTGTCAATCCTCACTCAGCTCA 60.029 50.000 0.00 0.00 0.00 4.26
160 161 2.028658 TGTGTCAATCCTCACTCAGCTC 60.029 50.000 0.00 0.00 35.82 4.09
161 162 1.973515 TGTGTCAATCCTCACTCAGCT 59.026 47.619 0.00 0.00 35.82 4.24
162 163 2.289320 ACTGTGTCAATCCTCACTCAGC 60.289 50.000 0.00 0.00 37.55 4.26
163 164 3.674528 ACTGTGTCAATCCTCACTCAG 57.325 47.619 0.00 0.00 39.16 3.35
164 165 3.494924 CCAACTGTGTCAATCCTCACTCA 60.495 47.826 0.00 0.00 35.82 3.41
165 166 3.070018 CCAACTGTGTCAATCCTCACTC 58.930 50.000 0.00 0.00 35.82 3.51
166 167 2.811873 GCCAACTGTGTCAATCCTCACT 60.812 50.000 0.00 0.00 35.82 3.41
167 168 1.537202 GCCAACTGTGTCAATCCTCAC 59.463 52.381 0.00 0.00 35.43 3.51
168 169 1.545428 GGCCAACTGTGTCAATCCTCA 60.545 52.381 0.00 0.00 0.00 3.86
169 170 1.168714 GGCCAACTGTGTCAATCCTC 58.831 55.000 0.00 0.00 0.00 3.71
170 171 0.606401 CGGCCAACTGTGTCAATCCT 60.606 55.000 2.24 0.00 0.00 3.24
171 172 1.586154 CCGGCCAACTGTGTCAATCC 61.586 60.000 2.24 0.00 0.00 3.01
172 173 0.889186 ACCGGCCAACTGTGTCAATC 60.889 55.000 0.00 0.00 0.00 2.67
173 174 0.467290 AACCGGCCAACTGTGTCAAT 60.467 50.000 0.00 0.00 0.00 2.57
174 175 1.077357 AACCGGCCAACTGTGTCAA 60.077 52.632 0.00 0.00 0.00 3.18
175 176 1.525077 GAACCGGCCAACTGTGTCA 60.525 57.895 0.00 0.00 0.00 3.58
176 177 2.604174 CGAACCGGCCAACTGTGTC 61.604 63.158 0.00 0.00 0.00 3.67
177 178 2.590575 CGAACCGGCCAACTGTGT 60.591 61.111 0.00 0.00 0.00 3.72
178 179 2.590575 ACGAACCGGCCAACTGTG 60.591 61.111 0.00 0.00 0.00 3.66
179 180 2.590575 CACGAACCGGCCAACTGT 60.591 61.111 0.00 0.00 0.00 3.55
180 181 2.113131 GAACACGAACCGGCCAACTG 62.113 60.000 0.00 0.00 0.00 3.16
181 182 1.890510 GAACACGAACCGGCCAACT 60.891 57.895 0.00 0.00 0.00 3.16
182 183 2.635338 GAACACGAACCGGCCAAC 59.365 61.111 0.00 0.00 0.00 3.77
183 184 2.968156 CGAACACGAACCGGCCAA 60.968 61.111 0.00 0.00 0.00 4.52
184 185 4.973055 CCGAACACGAACCGGCCA 62.973 66.667 0.00 0.00 36.62 5.36
185 186 4.974989 ACCGAACACGAACCGGCC 62.975 66.667 0.00 0.00 46.54 6.13
186 187 2.968697 AACCGAACACGAACCGGC 60.969 61.111 0.00 0.00 46.54 6.13
188 189 0.947180 ATCCAACCGAACACGAACCG 60.947 55.000 0.00 0.00 0.00 4.44
189 190 0.794473 GATCCAACCGAACACGAACC 59.206 55.000 0.00 0.00 0.00 3.62
190 191 0.437295 CGATCCAACCGAACACGAAC 59.563 55.000 0.00 0.00 0.00 3.95
191 192 0.314618 TCGATCCAACCGAACACGAA 59.685 50.000 0.00 0.00 32.64 3.85
192 193 0.528924 ATCGATCCAACCGAACACGA 59.471 50.000 0.00 0.00 39.62 4.35
193 194 0.645355 CATCGATCCAACCGAACACG 59.355 55.000 0.00 0.00 39.62 4.49
194 195 1.006832 CCATCGATCCAACCGAACAC 58.993 55.000 0.00 0.00 39.62 3.32
195 196 0.107897 CCCATCGATCCAACCGAACA 60.108 55.000 0.00 0.00 39.62 3.18
196 197 1.436983 GCCCATCGATCCAACCGAAC 61.437 60.000 0.00 0.00 39.62 3.95
197 198 1.153249 GCCCATCGATCCAACCGAA 60.153 57.895 0.00 0.00 39.62 4.30
198 199 2.363172 TGCCCATCGATCCAACCGA 61.363 57.895 0.00 0.00 40.53 4.69
199 200 2.180204 GTGCCCATCGATCCAACCG 61.180 63.158 0.00 0.00 0.00 4.44
200 201 1.823899 GGTGCCCATCGATCCAACC 60.824 63.158 0.00 0.00 0.00 3.77
201 202 2.180204 CGGTGCCCATCGATCCAAC 61.180 63.158 0.00 0.00 37.01 3.77
202 203 2.189257 CGGTGCCCATCGATCCAA 59.811 61.111 0.00 0.00 37.01 3.53
203 204 2.762043 TCGGTGCCCATCGATCCA 60.762 61.111 0.00 0.00 39.27 3.41
215 216 0.109597 GCAGGAAACAAGCATCGGTG 60.110 55.000 0.00 0.00 34.26 4.94
216 217 1.577328 CGCAGGAAACAAGCATCGGT 61.577 55.000 0.00 0.00 33.79 4.69
217 218 1.135315 CGCAGGAAACAAGCATCGG 59.865 57.895 0.00 0.00 33.79 4.18
218 219 0.238289 AACGCAGGAAACAAGCATCG 59.762 50.000 0.00 0.00 33.79 3.84
219 220 1.666888 CCAACGCAGGAAACAAGCATC 60.667 52.381 0.00 0.00 33.79 3.91
220 221 0.314935 CCAACGCAGGAAACAAGCAT 59.685 50.000 0.00 0.00 33.79 3.79
221 222 0.749818 TCCAACGCAGGAAACAAGCA 60.750 50.000 0.00 0.00 33.93 3.91
222 223 0.040067 CTCCAACGCAGGAAACAAGC 60.040 55.000 0.00 0.00 37.20 4.01
223 224 1.532868 CTCTCCAACGCAGGAAACAAG 59.467 52.381 0.00 0.00 37.20 3.16
224 225 1.593196 CTCTCCAACGCAGGAAACAA 58.407 50.000 0.00 0.00 37.20 2.83
225 226 0.250295 CCTCTCCAACGCAGGAAACA 60.250 55.000 0.00 0.00 37.20 2.83
226 227 1.578206 GCCTCTCCAACGCAGGAAAC 61.578 60.000 0.00 0.00 37.20 2.78
227 228 1.302511 GCCTCTCCAACGCAGGAAA 60.303 57.895 0.00 0.00 37.20 3.13
228 229 2.347490 GCCTCTCCAACGCAGGAA 59.653 61.111 0.00 0.00 37.20 3.36
229 230 3.706373 GGCCTCTCCAACGCAGGA 61.706 66.667 0.00 0.00 36.00 3.86
235 236 3.553095 AAGTGCCGGCCTCTCCAAC 62.553 63.158 26.77 13.80 34.01 3.77
236 237 3.249189 AAGTGCCGGCCTCTCCAA 61.249 61.111 26.77 0.00 34.01 3.53
237 238 4.020617 CAAGTGCCGGCCTCTCCA 62.021 66.667 26.77 0.00 34.01 3.86
238 239 3.672295 CTCAAGTGCCGGCCTCTCC 62.672 68.421 26.77 6.51 0.00 3.71
239 240 2.125350 CTCAAGTGCCGGCCTCTC 60.125 66.667 26.77 11.91 0.00 3.20
240 241 1.557269 ATTCTCAAGTGCCGGCCTCT 61.557 55.000 26.77 19.59 0.00 3.69
241 242 1.078143 ATTCTCAAGTGCCGGCCTC 60.078 57.895 26.77 17.42 0.00 4.70
242 243 1.377725 CATTCTCAAGTGCCGGCCT 60.378 57.895 26.77 18.07 0.00 5.19
243 244 1.648467 GACATTCTCAAGTGCCGGCC 61.648 60.000 26.77 15.80 0.00 6.13
244 245 1.796796 GACATTCTCAAGTGCCGGC 59.203 57.895 22.73 22.73 0.00 6.13
245 246 0.670546 ACGACATTCTCAAGTGCCGG 60.671 55.000 0.00 0.00 0.00 6.13
246 247 0.716108 GACGACATTCTCAAGTGCCG 59.284 55.000 0.00 0.00 0.00 5.69
247 248 1.079503 GGACGACATTCTCAAGTGCC 58.920 55.000 0.00 0.00 0.00 5.01
248 249 0.716108 CGGACGACATTCTCAAGTGC 59.284 55.000 0.00 0.00 0.00 4.40
249 250 1.067846 TCCGGACGACATTCTCAAGTG 60.068 52.381 0.00 0.00 0.00 3.16
250 251 1.254026 TCCGGACGACATTCTCAAGT 58.746 50.000 0.00 0.00 0.00 3.16
251 252 1.993370 GTTCCGGACGACATTCTCAAG 59.007 52.381 1.83 0.00 0.00 3.02
252 253 2.074547 GTTCCGGACGACATTCTCAA 57.925 50.000 1.83 0.00 0.00 3.02
253 254 3.806591 GTTCCGGACGACATTCTCA 57.193 52.632 1.83 0.00 0.00 3.27
275 276 9.686683 ATAGATTGGGCGCTTATCTATATTTTT 57.313 29.630 24.53 10.94 38.93 1.94
276 277 9.331282 GATAGATTGGGCGCTTATCTATATTTT 57.669 33.333 25.20 13.55 40.12 1.82
277 278 8.486210 TGATAGATTGGGCGCTTATCTATATTT 58.514 33.333 25.20 13.79 40.12 1.40
278 279 7.928706 GTGATAGATTGGGCGCTTATCTATATT 59.071 37.037 25.20 14.03 40.12 1.28
279 280 7.288852 AGTGATAGATTGGGCGCTTATCTATAT 59.711 37.037 25.20 17.20 40.12 0.86
280 281 6.607600 AGTGATAGATTGGGCGCTTATCTATA 59.392 38.462 25.20 16.71 40.12 1.31
281 282 5.423610 AGTGATAGATTGGGCGCTTATCTAT 59.576 40.000 25.32 25.32 41.77 1.98
282 283 4.772624 AGTGATAGATTGGGCGCTTATCTA 59.227 41.667 20.57 20.57 35.87 1.98
283 284 3.580458 AGTGATAGATTGGGCGCTTATCT 59.420 43.478 7.64 14.94 33.46 1.98
284 285 3.929610 GAGTGATAGATTGGGCGCTTATC 59.070 47.826 7.64 8.06 0.00 1.75
285 286 3.307059 GGAGTGATAGATTGGGCGCTTAT 60.307 47.826 7.64 0.00 0.00 1.73
286 287 2.037251 GGAGTGATAGATTGGGCGCTTA 59.963 50.000 7.64 0.00 0.00 3.09
287 288 1.202698 GGAGTGATAGATTGGGCGCTT 60.203 52.381 7.64 0.00 0.00 4.68
288 289 0.394565 GGAGTGATAGATTGGGCGCT 59.605 55.000 7.64 0.00 0.00 5.92
289 290 0.394565 AGGAGTGATAGATTGGGCGC 59.605 55.000 0.00 0.00 0.00 6.53
290 291 2.918712 AAGGAGTGATAGATTGGGCG 57.081 50.000 0.00 0.00 0.00 6.13
324 325 0.543277 CAGGAGTGCTAGATTGGGCA 59.457 55.000 0.00 0.00 36.01 5.36
325 326 3.393472 CAGGAGTGCTAGATTGGGC 57.607 57.895 0.00 0.00 0.00 5.36
336 337 2.328099 GGCTTCCAACGCAGGAGTG 61.328 63.158 0.00 0.00 39.25 3.51
337 338 2.032681 GGCTTCCAACGCAGGAGT 59.967 61.111 0.00 0.00 39.25 3.85
338 339 2.747855 GGGCTTCCAACGCAGGAG 60.748 66.667 0.00 0.00 39.25 3.69
339 340 3.126703 TTGGGCTTCCAACGCAGGA 62.127 57.895 0.00 0.00 44.96 3.86
340 341 2.597217 TTGGGCTTCCAACGCAGG 60.597 61.111 0.00 0.00 44.96 4.85
347 348 2.696187 GGTGTAAAAGTTTGGGCTTCCA 59.304 45.455 0.00 0.00 39.13 3.53
348 349 2.287970 CGGTGTAAAAGTTTGGGCTTCC 60.288 50.000 0.00 0.00 0.00 3.46
349 350 2.287970 CCGGTGTAAAAGTTTGGGCTTC 60.288 50.000 0.00 0.00 0.00 3.86
350 351 1.684450 CCGGTGTAAAAGTTTGGGCTT 59.316 47.619 0.00 0.00 0.00 4.35
351 352 1.324383 CCGGTGTAAAAGTTTGGGCT 58.676 50.000 0.00 0.00 0.00 5.19
352 353 1.034356 ACCGGTGTAAAAGTTTGGGC 58.966 50.000 6.12 0.00 0.00 5.36
353 354 1.269361 GCACCGGTGTAAAAGTTTGGG 60.269 52.381 33.92 5.88 0.00 4.12
354 355 1.679153 AGCACCGGTGTAAAAGTTTGG 59.321 47.619 33.92 6.10 0.00 3.28
355 356 2.287368 GGAGCACCGGTGTAAAAGTTTG 60.287 50.000 33.92 6.73 0.00 2.93
356 357 1.951602 GGAGCACCGGTGTAAAAGTTT 59.048 47.619 33.92 10.89 0.00 2.66
357 358 1.134037 TGGAGCACCGGTGTAAAAGTT 60.134 47.619 33.92 6.42 39.42 2.66
358 359 0.470766 TGGAGCACCGGTGTAAAAGT 59.529 50.000 33.92 13.16 39.42 2.66
359 360 0.872388 GTGGAGCACCGGTGTAAAAG 59.128 55.000 33.92 9.85 39.42 2.27
360 361 0.535553 GGTGGAGCACCGGTGTAAAA 60.536 55.000 33.92 16.21 44.95 1.52
361 362 1.071814 GGTGGAGCACCGGTGTAAA 59.928 57.895 33.92 15.85 44.95 2.01
362 363 2.745037 GGTGGAGCACCGGTGTAA 59.255 61.111 33.92 15.50 44.95 2.41
370 371 6.153756 ACAAAATTAAATTACGGTGGAGCAC 58.846 36.000 0.00 0.00 0.00 4.40
371 372 6.334102 ACAAAATTAAATTACGGTGGAGCA 57.666 33.333 0.00 0.00 0.00 4.26
372 373 7.646446 AAACAAAATTAAATTACGGTGGAGC 57.354 32.000 0.00 0.00 0.00 4.70
395 396 2.747989 TGTGTGGACGCTTGTGTAAAAA 59.252 40.909 0.00 0.00 0.00 1.94
396 397 2.353269 CTGTGTGGACGCTTGTGTAAAA 59.647 45.455 0.00 0.00 0.00 1.52
397 398 1.937223 CTGTGTGGACGCTTGTGTAAA 59.063 47.619 0.00 0.00 0.00 2.01
398 399 1.137282 TCTGTGTGGACGCTTGTGTAA 59.863 47.619 0.00 0.00 0.00 2.41
399 400 0.747852 TCTGTGTGGACGCTTGTGTA 59.252 50.000 0.00 0.00 0.00 2.90
400 401 0.810031 GTCTGTGTGGACGCTTGTGT 60.810 55.000 0.00 0.00 0.00 3.72
401 402 1.934463 GTCTGTGTGGACGCTTGTG 59.066 57.895 0.00 0.00 0.00 3.33
402 403 4.438346 GTCTGTGTGGACGCTTGT 57.562 55.556 0.00 0.00 0.00 3.16
408 409 1.006102 CAGGGACGTCTGTGTGGAC 60.006 63.158 16.46 0.00 0.00 4.02
409 410 2.867855 GCAGGGACGTCTGTGTGGA 61.868 63.158 16.46 0.00 37.12 4.02
410 411 2.357517 GCAGGGACGTCTGTGTGG 60.358 66.667 16.46 0.98 37.12 4.17
411 412 0.603707 AATGCAGGGACGTCTGTGTG 60.604 55.000 16.46 8.82 37.12 3.82
412 413 0.603707 CAATGCAGGGACGTCTGTGT 60.604 55.000 16.46 0.00 37.12 3.72
413 414 1.300971 CCAATGCAGGGACGTCTGTG 61.301 60.000 16.46 13.76 37.12 3.66
414 415 1.003355 CCAATGCAGGGACGTCTGT 60.003 57.895 16.46 0.00 37.12 3.41
415 416 0.742281 CTCCAATGCAGGGACGTCTG 60.742 60.000 16.46 8.03 37.79 3.51
416 417 0.904865 TCTCCAATGCAGGGACGTCT 60.905 55.000 16.46 0.00 0.00 4.18
417 418 0.179000 ATCTCCAATGCAGGGACGTC 59.821 55.000 7.13 7.13 0.00 4.34
418 419 0.107508 CATCTCCAATGCAGGGACGT 60.108 55.000 5.81 0.00 0.00 4.34
419 420 0.107508 ACATCTCCAATGCAGGGACG 60.108 55.000 5.81 3.76 0.00 4.79
420 421 1.673168 GACATCTCCAATGCAGGGAC 58.327 55.000 5.81 0.00 0.00 4.46
421 422 0.548031 GGACATCTCCAATGCAGGGA 59.452 55.000 9.35 9.35 36.42 4.20
422 423 0.549950 AGGACATCTCCAATGCAGGG 59.450 55.000 0.74 0.74 39.39 4.45
423 424 3.474600 CTTAGGACATCTCCAATGCAGG 58.525 50.000 0.00 0.00 39.39 4.85
424 425 2.877168 GCTTAGGACATCTCCAATGCAG 59.123 50.000 0.00 0.00 39.39 4.41
425 426 2.421952 GGCTTAGGACATCTCCAATGCA 60.422 50.000 0.00 0.00 39.39 3.96
426 427 2.158696 AGGCTTAGGACATCTCCAATGC 60.159 50.000 0.00 0.00 39.39 3.56
427 428 3.853355 AGGCTTAGGACATCTCCAATG 57.147 47.619 0.00 0.00 39.39 2.82
428 429 4.870021 AAAGGCTTAGGACATCTCCAAT 57.130 40.909 0.00 0.00 39.39 3.16
429 430 4.657814 AAAAGGCTTAGGACATCTCCAA 57.342 40.909 0.00 0.00 39.39 3.53
430 431 4.657814 AAAAAGGCTTAGGACATCTCCA 57.342 40.909 0.00 0.00 39.39 3.86
529 533 1.070134 TGCTTTACGTGTTGGCTCTCT 59.930 47.619 0.00 0.00 0.00 3.10
531 535 1.226746 GTGCTTTACGTGTTGGCTCT 58.773 50.000 0.00 0.00 0.00 4.09
772 776 7.484641 CGCTCTGCTACAATCTAATAATCTCTC 59.515 40.741 0.00 0.00 0.00 3.20
773 777 7.312154 CGCTCTGCTACAATCTAATAATCTCT 58.688 38.462 0.00 0.00 0.00 3.10
774 778 6.034470 GCGCTCTGCTACAATCTAATAATCTC 59.966 42.308 0.00 0.00 41.73 2.75
776 780 5.635280 TGCGCTCTGCTACAATCTAATAATC 59.365 40.000 9.73 0.00 46.63 1.75
778 782 4.944048 TGCGCTCTGCTACAATCTAATAA 58.056 39.130 9.73 0.00 46.63 1.40
779 783 4.584327 TGCGCTCTGCTACAATCTAATA 57.416 40.909 9.73 0.00 46.63 0.98
816 827 8.840200 TTACACTATCCTCCATTTTCTACTCT 57.160 34.615 0.00 0.00 0.00 3.24
985 1016 1.452108 CCATCCCGGAGAACCTTGC 60.452 63.158 0.73 0.00 36.56 4.01
1172 1206 5.083122 TGGTCCCTCTGCAATTCAAAATAA 58.917 37.500 0.00 0.00 0.00 1.40
1174 1208 3.509442 TGGTCCCTCTGCAATTCAAAAT 58.491 40.909 0.00 0.00 0.00 1.82
1175 1209 2.892852 CTGGTCCCTCTGCAATTCAAAA 59.107 45.455 0.00 0.00 0.00 2.44
1291 1325 4.641989 GCCCAGAAGATGAAGATTAAGCAA 59.358 41.667 0.00 0.00 0.00 3.91
1302 1336 0.254178 GCCAGAAGCCCAGAAGATGA 59.746 55.000 0.00 0.00 34.35 2.92
1349 1383 6.902948 CGAATTTAACCGCGAAATGAATAGAA 59.097 34.615 8.23 0.00 0.00 2.10
1353 1387 4.347813 CCGAATTTAACCGCGAAATGAAT 58.652 39.130 8.23 0.00 0.00 2.57
1415 1449 1.066787 GGCCCGCATATCTCTTACTCC 60.067 57.143 0.00 0.00 0.00 3.85
1416 1450 1.896465 AGGCCCGCATATCTCTTACTC 59.104 52.381 0.00 0.00 0.00 2.59
1417 1451 2.016905 AGGCCCGCATATCTCTTACT 57.983 50.000 0.00 0.00 0.00 2.24
1428 1462 2.031919 CAGTACACAAGGCCCGCA 59.968 61.111 0.00 0.00 0.00 5.69
1468 1503 6.060136 AGATTCATCACCACAGTAATCCATG 58.940 40.000 0.00 0.00 0.00 3.66
1518 1553 1.915614 GAACAGCGTCACAGCCATGG 61.916 60.000 7.63 7.63 38.01 3.66
1534 1569 2.936498 CCCCACATACAGACATTCGAAC 59.064 50.000 0.00 0.00 0.00 3.95
1575 1610 0.387239 CCTGCACGTTAAAAGCCAGC 60.387 55.000 0.00 0.00 0.00 4.85
1650 1685 4.948341 TGGATTCGGCAATAGCTTACTA 57.052 40.909 0.00 0.00 41.70 1.82
1808 1843 4.202020 TGCCACTTCTTGTAGCGATAGTAG 60.202 45.833 0.00 0.00 36.07 2.57
1814 1849 0.679505 AGTGCCACTTCTTGTAGCGA 59.320 50.000 0.00 0.00 36.07 4.93
1862 1897 5.964887 AAAATGACGACCACAACAAATTG 57.035 34.783 0.00 0.00 41.98 2.32
1871 1906 3.250040 AGCACAGTTAAAATGACGACCAC 59.750 43.478 0.00 0.00 0.00 4.16
1875 1910 3.472652 ACCAGCACAGTTAAAATGACGA 58.527 40.909 0.00 0.00 0.00 4.20
1877 1912 5.587289 TGAAACCAGCACAGTTAAAATGAC 58.413 37.500 0.00 0.00 0.00 3.06
1921 1956 8.697960 CATGAGACTTGAGATAACAATGATACG 58.302 37.037 0.00 0.00 0.00 3.06
1942 1980 0.514255 CCGTGACAGTTGTGCATGAG 59.486 55.000 0.00 0.00 0.00 2.90
1962 2000 9.778993 GTATCTACTGACGTTGACACTTTATAA 57.221 33.333 0.00 0.00 0.00 0.98
2011 2264 3.299503 AGTTCAACAATTGCTGGAGGTT 58.700 40.909 5.05 0.00 0.00 3.50
2059 2312 5.304614 ACGGAGTACATGATAGTATGCCTTT 59.695 40.000 0.00 0.00 41.94 3.11
2118 2371 6.119536 ACTTGTTGATGGTCAAAGTAACTCA 58.880 36.000 0.00 0.00 38.22 3.41
2121 2374 6.791303 TGAACTTGTTGATGGTCAAAGTAAC 58.209 36.000 0.00 0.00 38.22 2.50
2155 2408 7.555965 TCAGCAGTATACTTTGTGACATACAT 58.444 34.615 1.56 0.00 39.48 2.29
2158 2411 9.098355 GAATTCAGCAGTATACTTTGTGACATA 57.902 33.333 1.56 0.00 0.00 2.29
2159 2412 7.607607 TGAATTCAGCAGTATACTTTGTGACAT 59.392 33.333 3.38 0.00 0.00 3.06
2160 2413 6.934083 TGAATTCAGCAGTATACTTTGTGACA 59.066 34.615 3.38 0.00 0.00 3.58
2161 2414 7.364522 TGAATTCAGCAGTATACTTTGTGAC 57.635 36.000 3.38 0.00 0.00 3.67
2162 2415 9.836864 ATATGAATTCAGCAGTATACTTTGTGA 57.163 29.630 14.54 3.71 0.00 3.58
2175 2433 7.707624 ACTCCTTTCAAATATGAATTCAGCA 57.292 32.000 14.54 4.67 44.70 4.41
2262 2544 2.915869 TCCATCCGGAAATATAGGGCT 58.084 47.619 9.01 0.00 38.83 5.19
2330 2612 5.248640 ACTGTATGTTATGAGCAGCACTTT 58.751 37.500 0.00 0.00 0.00 2.66
2397 2679 1.305201 TTCAGCCTTGGACAAACGAC 58.695 50.000 0.00 0.00 0.00 4.34
2399 2681 1.600413 GCTTTCAGCCTTGGACAAACG 60.600 52.381 0.00 0.00 34.48 3.60
2400 2682 1.683385 AGCTTTCAGCCTTGGACAAAC 59.317 47.619 0.00 0.00 43.77 2.93
2414 2696 8.345565 TGAAAAAGAACTAGAATGTCAGCTTTC 58.654 33.333 0.00 0.00 0.00 2.62
2512 2794 2.666508 GCTTGAGAAGTGCAATGCAATG 59.333 45.455 10.44 0.00 41.47 2.82
2743 3025 8.632551 CAAATGATTGCACACATATTATAAGCG 58.367 33.333 5.42 0.00 0.00 4.68
2848 3133 9.990360 TGTATCAGAACACTAACAAGTTTATCA 57.010 29.630 0.00 0.00 0.00 2.15
2906 3192 2.799126 TCCTACGCATTGAATTGGGT 57.201 45.000 0.00 0.00 44.06 4.51
2994 3280 8.863049 GTCATACAATTTCAATAAGCACCAAAG 58.137 33.333 0.00 0.00 0.00 2.77
3005 3291 7.815641 TCACATTCGTGTCATACAATTTCAAT 58.184 30.769 0.00 0.00 44.02 2.57
3021 3307 5.489792 AGGCTTCCATATATCACATTCGT 57.510 39.130 0.00 0.00 0.00 3.85
3054 3340 3.411415 GGCATAACATGACAACAGAGC 57.589 47.619 0.00 0.00 38.49 4.09
3075 3361 5.955355 ACAGCTTATACTCAAGACTCTCCTT 59.045 40.000 0.00 0.00 0.00 3.36
3079 3365 8.487848 TCTACTACAGCTTATACTCAAGACTCT 58.512 37.037 0.00 0.00 0.00 3.24
3134 3426 7.071824 AGAGCCCTAATCTAGCTTAAACTCAAT 59.928 37.037 0.00 0.00 36.87 2.57
3152 3444 0.614979 ACTTCAAGCCGAGAGCCCTA 60.615 55.000 0.00 0.00 45.47 3.53
3157 3449 3.059325 CAGAACAAACTTCAAGCCGAGAG 60.059 47.826 0.00 0.00 0.00 3.20
3166 3458 5.760253 GTCAGAGAATCCAGAACAAACTTCA 59.240 40.000 0.00 0.00 33.66 3.02
3174 3466 5.046231 ACCCTAAAGTCAGAGAATCCAGAAC 60.046 44.000 0.00 0.00 33.66 3.01
3186 3478 4.576463 GTGGCATCATAACCCTAAAGTCAG 59.424 45.833 0.00 0.00 0.00 3.51
3468 3760 2.649816 AGGATCCCTTAACAGCCTTTGT 59.350 45.455 8.55 0.00 43.45 2.83
3529 3821 2.949644 GGTATTCAGCATAACCCACCAC 59.050 50.000 0.00 0.00 0.00 4.16
3537 3829 6.994421 TCCACTCATAGGTATTCAGCATAA 57.006 37.500 0.00 0.00 0.00 1.90
3644 3936 9.667107 CAAATTATCTGAACCAAGTAGTCCTTA 57.333 33.333 0.00 0.00 0.00 2.69
3646 3938 6.599638 GCAAATTATCTGAACCAAGTAGTCCT 59.400 38.462 0.00 0.00 0.00 3.85
3647 3939 6.183360 GGCAAATTATCTGAACCAAGTAGTCC 60.183 42.308 0.00 0.00 0.00 3.85
3648 3940 6.599638 AGGCAAATTATCTGAACCAAGTAGTC 59.400 38.462 0.00 0.00 0.00 2.59
3649 3941 6.375455 CAGGCAAATTATCTGAACCAAGTAGT 59.625 38.462 0.00 0.00 0.00 2.73
3650 3942 6.375455 ACAGGCAAATTATCTGAACCAAGTAG 59.625 38.462 8.87 0.00 33.19 2.57
3651 3943 6.245408 ACAGGCAAATTATCTGAACCAAGTA 58.755 36.000 8.87 0.00 33.19 2.24
3688 3980 7.115414 AGTAAAGAAGATGGGAGGAATTCAAG 58.885 38.462 7.93 0.00 0.00 3.02
3693 3985 5.733647 AGGAAGTAAAGAAGATGGGAGGAAT 59.266 40.000 0.00 0.00 0.00 3.01
3784 4076 2.158475 TCTTTGACAGTTCCCTGCCAAT 60.158 45.455 0.00 0.00 40.20 3.16
3948 4240 1.637553 ACTTGGAAGATCCCATGCAGT 59.362 47.619 0.00 0.00 35.03 4.40
4035 4327 3.829601 GTCTCTTCTTCTCCTTCTGGACA 59.170 47.826 0.00 0.00 37.46 4.02
4080 4372 1.032014 TGTGCTCCTTCAAGTTTGCC 58.968 50.000 0.00 0.00 0.00 4.52
4137 4429 1.722034 TTCCTCACTGACTTGGCTCT 58.278 50.000 0.00 0.00 0.00 4.09
4200 4492 2.368875 AGAAGGAACAAGGTCACACGAT 59.631 45.455 0.00 0.00 0.00 3.73
4224 4516 7.383102 ACATTCATCGATAGCAACTTTTCTT 57.617 32.000 0.00 0.00 0.00 2.52
4301 4593 0.743688 TGTCAAACATGCCCACACAC 59.256 50.000 0.00 0.00 0.00 3.82
4328 4620 1.917872 TAGCATTTGAACCACCACCC 58.082 50.000 0.00 0.00 0.00 4.61
4438 4730 4.704540 CCATGTCTAACCACTAATGCCAAA 59.295 41.667 0.00 0.00 0.00 3.28
4444 4736 6.658849 TGCATAACCATGTCTAACCACTAAT 58.341 36.000 0.00 0.00 34.40 1.73
4512 5111 6.040391 TCCTTAAGGAATAAAATGCGGGAATG 59.960 38.462 22.27 0.00 42.18 2.67
4546 5286 2.817901 TGAGTGATCTCATGATGCACG 58.182 47.619 13.62 0.00 44.58 5.34
4604 5344 5.066505 GCCATACATGAAACCAAGTCCTTAG 59.933 44.000 0.00 0.00 0.00 2.18
4648 5388 2.420022 GCTGACGGCAGTAACATGATTT 59.580 45.455 21.75 0.00 44.17 2.17
4701 5782 1.638589 TGGTTTCCCTTGTCCCATAGG 59.361 52.381 0.00 0.00 0.00 2.57
4702 5783 2.945890 GCTGGTTTCCCTTGTCCCATAG 60.946 54.545 0.00 0.00 0.00 2.23
4703 5784 1.005450 GCTGGTTTCCCTTGTCCCATA 59.995 52.381 0.00 0.00 0.00 2.74
4704 5785 0.251787 GCTGGTTTCCCTTGTCCCAT 60.252 55.000 0.00 0.00 0.00 4.00
4705 5786 1.152830 GCTGGTTTCCCTTGTCCCA 59.847 57.895 0.00 0.00 0.00 4.37
4706 5787 1.971695 CGCTGGTTTCCCTTGTCCC 60.972 63.158 0.00 0.00 0.00 4.46
4707 5788 0.536460 TTCGCTGGTTTCCCTTGTCC 60.536 55.000 0.00 0.00 0.00 4.02
4708 5789 0.591659 GTTCGCTGGTTTCCCTTGTC 59.408 55.000 0.00 0.00 0.00 3.18
4709 5790 0.106918 TGTTCGCTGGTTTCCCTTGT 60.107 50.000 0.00 0.00 0.00 3.16
4710 5791 1.028905 TTGTTCGCTGGTTTCCCTTG 58.971 50.000 0.00 0.00 0.00 3.61
4711 5792 1.995376 ATTGTTCGCTGGTTTCCCTT 58.005 45.000 0.00 0.00 0.00 3.95
4712 5793 2.618045 CCTATTGTTCGCTGGTTTCCCT 60.618 50.000 0.00 0.00 0.00 4.20
4713 5794 1.743394 CCTATTGTTCGCTGGTTTCCC 59.257 52.381 0.00 0.00 0.00 3.97
4714 5795 2.418976 GACCTATTGTTCGCTGGTTTCC 59.581 50.000 0.00 0.00 0.00 3.13
4715 5796 2.418976 GGACCTATTGTTCGCTGGTTTC 59.581 50.000 0.00 0.00 0.00 2.78
4716 5797 2.039879 AGGACCTATTGTTCGCTGGTTT 59.960 45.455 0.00 0.00 0.00 3.27
4717 5798 1.628846 AGGACCTATTGTTCGCTGGTT 59.371 47.619 0.00 0.00 0.00 3.67
4718 5799 1.207329 GAGGACCTATTGTTCGCTGGT 59.793 52.381 0.00 0.00 0.00 4.00
4719 5800 1.473434 GGAGGACCTATTGTTCGCTGG 60.473 57.143 0.00 0.00 0.00 4.85
4720 5801 1.482593 AGGAGGACCTATTGTTCGCTG 59.517 52.381 0.00 0.00 45.83 5.18
4721 5802 1.867363 AGGAGGACCTATTGTTCGCT 58.133 50.000 0.00 0.00 45.83 4.93
4732 5813 4.779733 TGCGAGGGGAGGAGGACC 62.780 72.222 0.00 0.00 0.00 4.46
4733 5814 2.444895 ATGCGAGGGGAGGAGGAC 60.445 66.667 0.00 0.00 0.00 3.85
4734 5815 2.444706 CATGCGAGGGGAGGAGGA 60.445 66.667 0.00 0.00 0.00 3.71
4735 5816 1.915078 AAACATGCGAGGGGAGGAGG 61.915 60.000 0.00 0.00 0.00 4.30
4736 5817 0.462759 GAAACATGCGAGGGGAGGAG 60.463 60.000 0.00 0.00 0.00 3.69
4737 5818 1.198094 TGAAACATGCGAGGGGAGGA 61.198 55.000 0.00 0.00 0.00 3.71
4738 5819 0.745845 CTGAAACATGCGAGGGGAGG 60.746 60.000 0.00 0.00 0.00 4.30
4739 5820 1.372087 GCTGAAACATGCGAGGGGAG 61.372 60.000 0.00 0.00 0.00 4.30
4740 5821 1.377202 GCTGAAACATGCGAGGGGA 60.377 57.895 0.00 0.00 0.00 4.81
4741 5822 3.190878 GCTGAAACATGCGAGGGG 58.809 61.111 0.00 0.00 0.00 4.79
4769 5850 3.343617 CGTTAAGGCATTTCTGGGAGAA 58.656 45.455 0.00 0.00 31.28 2.87
4771 5852 2.017049 CCGTTAAGGCATTTCTGGGAG 58.983 52.381 0.00 0.00 0.00 4.30
4803 5884 3.194116 TCCAGGCTCAAGATGAAATTTGC 59.806 43.478 0.00 0.00 0.00 3.68
4817 5898 3.935828 GTCTTGTAGAAACATCCAGGCTC 59.064 47.826 0.00 0.00 34.97 4.70
4836 5917 2.290641 GGTTGAGCACGACAATTTGTCT 59.709 45.455 23.29 8.10 44.85 3.41
4838 5919 2.020720 TGGTTGAGCACGACAATTTGT 58.979 42.857 0.63 0.63 32.40 2.83
4878 5959 5.200368 AGAGGTGGCAGTTTTTAATTGTG 57.800 39.130 0.00 0.00 0.00 3.33
4879 5960 5.869649 AAGAGGTGGCAGTTTTTAATTGT 57.130 34.783 0.00 0.00 0.00 2.71
4880 5961 7.657336 TCTAAAGAGGTGGCAGTTTTTAATTG 58.343 34.615 0.00 0.00 0.00 2.32
4948 6029 8.552865 CAATTTTCACATTTTTCAGAGCATGAA 58.447 29.630 0.00 0.59 46.31 2.57
4949 6030 7.711772 ACAATTTTCACATTTTTCAGAGCATGA 59.288 29.630 0.00 0.00 35.62 3.07
5020 6101 8.713036 TGGAAATTTTTATTGGGGATTATCCAG 58.287 33.333 13.78 0.00 38.64 3.86
5022 6103 9.506018 CATGGAAATTTTTATTGGGGATTATCC 57.494 33.333 1.91 1.91 35.23 2.59
5065 6148 4.463050 TTTTAGTGTTGGGAGGATGGTT 57.537 40.909 0.00 0.00 0.00 3.67
5066 6149 4.463050 TTTTTAGTGTTGGGAGGATGGT 57.537 40.909 0.00 0.00 0.00 3.55
5067 6150 4.381932 GCATTTTTAGTGTTGGGAGGATGG 60.382 45.833 0.00 0.00 0.00 3.51
5090 6173 4.518211 GGCACTTTATCATTGAGAGGATGG 59.482 45.833 0.00 0.00 0.00 3.51
5105 6188 4.842531 TCATTGAGAGGATGGCACTTTA 57.157 40.909 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.