Multiple sequence alignment - TraesCS3B01G233000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G233000 chr3B 100.000 7182 0 0 1 7182 359229610 359222429 0.000000e+00 13263.0
1 TraesCS3B01G233000 chr3B 83.136 1518 137 55 1996 3451 819899664 819898204 0.000000e+00 1275.0
2 TraesCS3B01G233000 chr3B 82.841 1218 110 42 2250 3435 819932804 819931654 0.000000e+00 1000.0
3 TraesCS3B01G233000 chr3B 85.174 1005 105 22 4021 4999 819931605 819930619 0.000000e+00 990.0
4 TraesCS3B01G233000 chr3B 85.344 655 71 16 5910 6545 819896989 819896341 0.000000e+00 654.0
5 TraesCS3B01G233000 chr3B 87.845 543 47 9 4029 4563 819898170 819897639 2.850000e-173 619.0
6 TraesCS3B01G233000 chr3B 85.560 464 46 11 5967 6411 819930300 819929839 3.920000e-127 466.0
7 TraesCS3B01G233000 chr3B 87.080 387 34 8 4634 5004 819897600 819897214 2.400000e-114 424.0
8 TraesCS3B01G233000 chr3B 90.977 266 18 4 1996 2256 819933094 819932830 3.190000e-93 353.0
9 TraesCS3B01G233000 chr3B 98.500 200 1 2 5003 5201 738697534 738697732 1.150000e-92 351.0
10 TraesCS3B01G233000 chr3B 88.587 184 10 7 1064 1237 819934375 819934193 5.640000e-51 213.0
11 TraesCS3B01G233000 chr3B 95.604 91 4 0 1147 1237 819901639 819901549 5.810000e-31 147.0
12 TraesCS3B01G233000 chr3B 96.296 54 2 0 266 319 359229292 359229239 9.920000e-14 89.8
13 TraesCS3B01G233000 chr3B 96.296 54 2 0 319 372 359229345 359229292 9.920000e-14 89.8
14 TraesCS3B01G233000 chr3D 96.322 3181 65 7 1839 5004 274337930 274341073 0.000000e+00 5179.0
15 TraesCS3B01G233000 chr3D 96.246 1412 30 8 5185 6574 274341053 274342463 0.000000e+00 2292.0
16 TraesCS3B01G233000 chr3D 95.158 950 25 6 783 1724 274336836 274337772 0.000000e+00 1480.0
17 TraesCS3B01G233000 chr3D 85.995 1321 97 37 1996 3277 609169530 609168259 0.000000e+00 1334.0
18 TraesCS3B01G233000 chr3D 84.481 1321 118 38 1996 3277 609215927 609214655 0.000000e+00 1223.0
19 TraesCS3B01G233000 chr3D 86.178 955 93 18 3999 4928 609214265 609213325 0.000000e+00 996.0
20 TraesCS3B01G233000 chr3D 85.553 976 95 25 4061 5004 609555797 609556758 0.000000e+00 979.0
21 TraesCS3B01G233000 chr3D 79.859 1281 133 64 5819 7017 609213124 609211887 0.000000e+00 821.0
22 TraesCS3B01G233000 chr3D 86.418 751 67 19 5819 6544 609166994 609166254 0.000000e+00 789.0
23 TraesCS3B01G233000 chr3D 88.998 609 24 16 6579 7182 274342523 274343093 0.000000e+00 713.0
24 TraesCS3B01G233000 chr3D 89.462 465 45 4 319 781 274315455 274315917 1.040000e-162 584.0
25 TraesCS3B01G233000 chr3D 85.974 549 54 11 4021 4561 609168070 609167537 3.760000e-157 566.0
26 TraesCS3B01G233000 chr3D 92.188 320 24 1 1 319 274315189 274315508 1.100000e-122 451.0
27 TraesCS3B01G233000 chr3D 88.114 387 30 8 4634 5004 609167497 609167111 5.110000e-121 446.0
28 TraesCS3B01G233000 chr3D 83.154 279 22 15 964 1237 609217272 609217014 1.560000e-56 231.0
29 TraesCS3B01G233000 chr3D 81.905 210 22 8 3882 4089 609555238 609555433 5.760000e-36 163.0
30 TraesCS3B01G233000 chr3D 94.505 91 5 0 1147 1237 609171623 609171533 2.700000e-29 141.0
31 TraesCS3B01G233000 chr3D 96.491 57 1 1 1714 1769 16318160 16318104 7.670000e-15 93.5
32 TraesCS3B01G233000 chr3A 95.690 3202 65 14 1854 5004 359081819 359078640 0.000000e+00 5081.0
33 TraesCS3B01G233000 chr3A 84.232 1503 118 49 1996 3451 742614903 742613473 0.000000e+00 1352.0
34 TraesCS3B01G233000 chr3A 84.123 1499 130 47 1996 3451 742768923 742767490 0.000000e+00 1351.0
35 TraesCS3B01G233000 chr3A 94.907 805 24 6 924 1724 359082623 359081832 0.000000e+00 1243.0
36 TraesCS3B01G233000 chr3A 93.426 791 35 4 5185 5958 359078660 359077870 0.000000e+00 1157.0
37 TraesCS3B01G233000 chr3A 95.677 532 15 3 5953 6476 359077831 359077300 0.000000e+00 848.0
38 TraesCS3B01G233000 chr3A 83.841 953 91 24 4021 4928 742767464 742766530 0.000000e+00 848.0
39 TraesCS3B01G233000 chr3A 86.083 697 66 18 5873 6544 742612335 742611645 0.000000e+00 721.0
40 TraesCS3B01G233000 chr3A 89.116 588 29 12 6478 7043 359077173 359076599 0.000000e+00 699.0
41 TraesCS3B01G233000 chr3A 87.420 628 53 15 5964 6573 742766197 742765578 0.000000e+00 699.0
42 TraesCS3B01G233000 chr3A 86.157 549 53 11 4021 4561 742613447 742612914 8.080000e-159 571.0
43 TraesCS3B01G233000 chr3A 88.889 387 27 8 4634 5004 742612874 742612488 5.080000e-126 462.0
44 TraesCS3B01G233000 chr3A 90.625 320 29 1 1 319 358130684 358131003 2.400000e-114 424.0
45 TraesCS3B01G233000 chr3A 96.135 207 6 2 4995 5201 648697478 648697682 3.210000e-88 337.0
46 TraesCS3B01G233000 chr3A 88.462 130 14 1 639 767 359085420 359085291 9.650000e-34 156.0
47 TraesCS3B01G233000 chr3A 84.564 149 15 6 1147 1288 742770078 742769931 2.700000e-29 141.0
48 TraesCS3B01G233000 chr3A 88.889 108 5 2 1162 1262 742616982 742616875 7.560000e-25 126.0
49 TraesCS3B01G233000 chr3A 91.429 70 4 1 7043 7112 359076359 359076292 2.130000e-15 95.3
50 TraesCS3B01G233000 chr3A 100.000 44 0 0 1793 1836 12835377 12835420 1.660000e-11 82.4
51 TraesCS3B01G233000 chr3A 100.000 42 0 0 1795 1836 717491531 717491490 2.150000e-10 78.7
52 TraesCS3B01G233000 chr3A 95.238 42 2 0 1793 1834 623033574 623033615 4.650000e-07 67.6
53 TraesCS3B01G233000 chr6B 100.000 188 0 0 5003 5190 455079892 455079705 1.480000e-91 348.0
54 TraesCS3B01G233000 chr1B 99.476 191 0 1 5003 5193 520262172 520261983 5.330000e-91 346.0
55 TraesCS3B01G233000 chr1B 89.231 65 7 0 146 210 357412666 357412730 1.660000e-11 82.4
56 TraesCS3B01G233000 chr7A 98.958 192 2 0 5000 5191 433079671 433079862 1.920000e-90 344.0
57 TraesCS3B01G233000 chr2B 96.635 208 4 3 4991 5197 57652598 57652803 6.900000e-90 342.0
58 TraesCS3B01G233000 chr2B 97.990 199 1 3 5003 5201 71234631 71234436 6.900000e-90 342.0
59 TraesCS3B01G233000 chr2B 96.429 56 2 0 1716 1771 575876519 575876574 7.670000e-15 93.5
60 TraesCS3B01G233000 chr2A 95.327 214 8 2 5005 5216 758555650 758555863 8.920000e-89 339.0
61 TraesCS3B01G233000 chr2A 93.548 62 1 3 1720 1780 185123448 185123389 9.920000e-14 89.8
62 TraesCS3B01G233000 chr2A 87.179 78 8 2 1693 1770 763199279 763199354 3.570000e-13 87.9
63 TraesCS3B01G233000 chr2A 87.013 77 5 5 1693 1769 693209868 693209939 1.660000e-11 82.4
64 TraesCS3B01G233000 chr7B 97.030 202 3 3 4988 5186 183306486 183306687 3.210000e-88 337.0
65 TraesCS3B01G233000 chr5D 96.923 65 2 0 1159 1223 346876508 346876572 7.620000e-20 110.0
66 TraesCS3B01G233000 chr1A 98.148 54 1 0 1716 1769 497872333 497872386 2.130000e-15 95.3
67 TraesCS3B01G233000 chr1A 90.769 65 5 1 1723 1787 578016727 578016664 1.280000e-12 86.1
68 TraesCS3B01G233000 chr1A 100.000 44 0 0 1793 1836 64806189 64806146 1.660000e-11 82.4
69 TraesCS3B01G233000 chr4B 88.158 76 3 2 1723 1798 300934641 300934572 1.280000e-12 86.1
70 TraesCS3B01G233000 chr4B 97.778 45 1 0 1792 1836 383097850 383097806 2.150000e-10 78.7
71 TraesCS3B01G233000 chr7D 88.000 75 4 5 1692 1766 450004902 450004833 4.620000e-12 84.2
72 TraesCS3B01G233000 chr4A 97.778 45 1 0 1792 1836 660918069 660918025 2.150000e-10 78.7
73 TraesCS3B01G233000 chrUn 97.727 44 1 0 1793 1836 10314532 10314489 7.730000e-10 76.8
74 TraesCS3B01G233000 chrUn 97.727 44 1 0 1793 1836 299762064 299762021 7.730000e-10 76.8
75 TraesCS3B01G233000 chr6D 97.727 44 1 0 1793 1836 9360094 9360137 7.730000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G233000 chr3B 359222429 359229610 7181 True 4480.866667 13263 97.530667 1 7182 3 chr3B.!!$R1 7181
1 TraesCS3B01G233000 chr3B 819896341 819901639 5298 True 623.800000 1275 87.801800 1147 6545 5 chr3B.!!$R2 5398
2 TraesCS3B01G233000 chr3B 819929839 819934375 4536 True 604.400000 1000 86.627800 1064 6411 5 chr3B.!!$R3 5347
3 TraesCS3B01G233000 chr3D 274336836 274343093 6257 False 2416.000000 5179 94.181000 783 7182 4 chr3D.!!$F2 6399
4 TraesCS3B01G233000 chr3D 609211887 609217272 5385 True 817.750000 1223 83.418000 964 7017 4 chr3D.!!$R3 6053
5 TraesCS3B01G233000 chr3D 609166254 609171623 5369 True 655.200000 1334 88.201200 1147 6544 5 chr3D.!!$R2 5397
6 TraesCS3B01G233000 chr3D 609555238 609556758 1520 False 571.000000 979 83.729000 3882 5004 2 chr3D.!!$F3 1122
7 TraesCS3B01G233000 chr3D 274315189 274315917 728 False 517.500000 584 90.825000 1 781 2 chr3D.!!$F1 780
8 TraesCS3B01G233000 chr3A 359076292 359085420 9128 True 1325.614286 5081 92.672429 639 7112 7 chr3A.!!$R2 6473
9 TraesCS3B01G233000 chr3A 742765578 742770078 4500 True 759.750000 1351 84.987000 1147 6573 4 chr3A.!!$R4 5426
10 TraesCS3B01G233000 chr3A 742611645 742616982 5337 True 646.400000 1352 86.850000 1162 6544 5 chr3A.!!$R3 5382

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 190 0.106149 CCCTCGAAATTCCTACCCCG 59.894 60.000 0.00 0.00 0.00 5.73 F
1790 6696 0.384669 GATGTACTCCCTTCGTCGGG 59.615 60.000 5.56 5.56 46.13 5.14 F
1849 6837 1.717194 TTCGGAATTTTCGGACGGAG 58.283 50.000 0.00 0.00 36.45 4.63 F
2626 7688 1.409064 TGCTGTCCTGCTCGGTAATAG 59.591 52.381 0.00 0.00 0.00 1.73 F
3802 9186 0.813184 GCACAGCCATGCACTATTGT 59.187 50.000 4.95 0.00 45.39 2.71 F
5097 10945 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 6739 0.251073 TCCCTCCGTCCGAAAATTCC 59.749 55.000 0.00 0.00 0.00 3.01 R
2626 7688 1.961277 CCACCACTCACAGCGGTTC 60.961 63.158 0.00 0.00 25.64 3.62 R
3742 9125 3.261216 CTCGTGCGTGTGTGTGCA 61.261 61.111 0.00 0.00 39.13 4.57 R
3894 9278 1.956043 TTGCCCTGCAATCGTTGTC 59.044 52.632 0.00 0.00 43.99 3.18 R
5148 10996 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35 R
6955 13239 0.387622 TTCAGTAACTCCGTTCGGCG 60.388 55.000 0.00 0.00 40.95 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 1.549170 GGACGACTACCACCATGAACT 59.451 52.381 0.00 0.00 0.00 3.01
70 71 6.465084 ACCACCATGAACTTTAGAGACTTAC 58.535 40.000 0.00 0.00 0.00 2.34
72 73 6.295916 CCACCATGAACTTTAGAGACTTACCT 60.296 42.308 0.00 0.00 0.00 3.08
74 75 7.332182 CACCATGAACTTTAGAGACTTACCTTC 59.668 40.741 0.00 0.00 0.00 3.46
85 86 3.130693 AGACTTACCTTCGACCTACATGC 59.869 47.826 0.00 0.00 0.00 4.06
86 87 2.167900 ACTTACCTTCGACCTACATGCC 59.832 50.000 0.00 0.00 0.00 4.40
117 119 3.443045 CATGCACCTCAACCCCGC 61.443 66.667 0.00 0.00 0.00 6.13
144 146 3.580458 AGGCTATATCCGAAGTGCTGATT 59.420 43.478 0.00 0.00 0.00 2.57
148 150 6.595716 GGCTATATCCGAAGTGCTGATTAATT 59.404 38.462 0.00 0.00 0.00 1.40
183 185 4.975631 TGTTCAAACCCTCGAAATTCCTA 58.024 39.130 0.00 0.00 0.00 2.94
187 189 1.210538 ACCCTCGAAATTCCTACCCC 58.789 55.000 0.00 0.00 0.00 4.95
188 190 0.106149 CCCTCGAAATTCCTACCCCG 59.894 60.000 0.00 0.00 0.00 5.73
219 221 5.368523 TGAATACCCTCGAATCCCTAATTGT 59.631 40.000 0.00 0.00 0.00 2.71
230 232 6.259167 CGAATCCCTAATTGTAATCGGTTCAA 59.741 38.462 0.00 0.00 0.00 2.69
233 235 7.328277 TCCCTAATTGTAATCGGTTCAATTG 57.672 36.000 19.94 0.00 40.45 2.32
284 286 6.398095 TCGAATGTGTGATCTACAATCAAGT 58.602 36.000 14.71 0.00 41.89 3.16
303 305 3.000727 AGTATAAATCTAATGCGGCCGC 58.999 45.455 42.35 42.35 42.35 6.53
319 321 3.903876 CGCAGGAAAATCGATGGTG 57.096 52.632 0.00 0.00 0.00 4.17
320 322 1.086696 CGCAGGAAAATCGATGGTGT 58.913 50.000 0.00 0.00 0.00 4.16
321 323 1.202065 CGCAGGAAAATCGATGGTGTG 60.202 52.381 0.00 0.00 0.00 3.82
322 324 1.812571 GCAGGAAAATCGATGGTGTGT 59.187 47.619 0.00 0.00 0.00 3.72
323 325 2.414559 GCAGGAAAATCGATGGTGTGTG 60.415 50.000 0.00 0.00 0.00 3.82
324 326 3.073678 CAGGAAAATCGATGGTGTGTGA 58.926 45.455 0.00 0.00 0.00 3.58
325 327 3.691118 CAGGAAAATCGATGGTGTGTGAT 59.309 43.478 0.00 0.00 0.00 3.06
326 328 3.941483 AGGAAAATCGATGGTGTGTGATC 59.059 43.478 0.00 0.00 0.00 2.92
327 329 3.941483 GGAAAATCGATGGTGTGTGATCT 59.059 43.478 0.00 0.00 0.00 2.75
328 330 5.104941 AGGAAAATCGATGGTGTGTGATCTA 60.105 40.000 0.00 0.00 0.00 1.98
329 331 5.006746 GGAAAATCGATGGTGTGTGATCTAC 59.993 44.000 0.00 0.00 0.00 2.59
330 332 4.736126 AATCGATGGTGTGTGATCTACA 57.264 40.909 0.00 0.00 36.82 2.74
331 333 4.736126 ATCGATGGTGTGTGATCTACAA 57.264 40.909 0.00 0.00 41.89 2.41
332 334 4.736126 TCGATGGTGTGTGATCTACAAT 57.264 40.909 5.19 0.00 41.89 2.71
333 335 4.682787 TCGATGGTGTGTGATCTACAATC 58.317 43.478 5.19 5.54 41.89 2.67
334 336 4.159506 TCGATGGTGTGTGATCTACAATCA 59.840 41.667 5.19 7.38 41.89 2.57
335 337 4.869861 CGATGGTGTGTGATCTACAATCAA 59.130 41.667 5.19 0.00 41.89 2.57
336 338 5.006068 CGATGGTGTGTGATCTACAATCAAG 59.994 44.000 5.19 3.87 41.89 3.02
337 339 5.227569 TGGTGTGTGATCTACAATCAAGT 57.772 39.130 5.19 0.00 41.89 3.16
338 340 6.353404 TGGTGTGTGATCTACAATCAAGTA 57.647 37.500 5.19 0.00 41.89 2.24
339 341 6.946340 TGGTGTGTGATCTACAATCAAGTAT 58.054 36.000 5.19 0.00 41.89 2.12
340 342 8.073467 TGGTGTGTGATCTACAATCAAGTATA 57.927 34.615 5.19 0.00 41.89 1.47
341 343 8.536175 TGGTGTGTGATCTACAATCAAGTATAA 58.464 33.333 5.19 0.00 41.89 0.98
342 344 9.378551 GGTGTGTGATCTACAATCAAGTATAAA 57.621 33.333 5.19 0.00 41.89 1.40
351 353 9.177304 TCTACAATCAAGTATAAATCTAACGCG 57.823 33.333 3.53 3.53 0.00 6.01
352 354 7.173863 ACAATCAAGTATAAATCTAACGCGG 57.826 36.000 12.47 0.00 0.00 6.46
353 355 5.840940 ATCAAGTATAAATCTAACGCGGC 57.159 39.130 12.47 0.00 0.00 6.53
354 356 4.940463 TCAAGTATAAATCTAACGCGGCT 58.060 39.130 12.47 0.00 0.00 5.52
355 357 4.743151 TCAAGTATAAATCTAACGCGGCTG 59.257 41.667 12.47 0.00 0.00 4.85
356 358 3.057734 AGTATAAATCTAACGCGGCTGC 58.942 45.455 12.47 7.70 37.91 5.25
357 359 1.948104 ATAAATCTAACGCGGCTGCA 58.052 45.000 19.50 0.00 42.97 4.41
358 360 1.286501 TAAATCTAACGCGGCTGCAG 58.713 50.000 19.50 10.11 42.97 4.41
359 361 1.369091 AAATCTAACGCGGCTGCAGG 61.369 55.000 19.50 4.39 42.97 4.85
360 362 2.238847 AATCTAACGCGGCTGCAGGA 62.239 55.000 19.50 9.57 42.97 3.86
361 363 2.238847 ATCTAACGCGGCTGCAGGAA 62.239 55.000 19.50 0.00 42.97 3.36
362 364 2.031314 TAACGCGGCTGCAGGAAA 59.969 55.556 19.50 0.00 42.97 3.13
363 365 1.573829 CTAACGCGGCTGCAGGAAAA 61.574 55.000 19.50 0.00 42.97 2.29
364 366 0.958382 TAACGCGGCTGCAGGAAAAT 60.958 50.000 19.50 0.00 42.97 1.82
365 367 2.100991 CGCGGCTGCAGGAAAATC 59.899 61.111 19.50 0.00 42.97 2.17
366 368 2.100991 GCGGCTGCAGGAAAATCG 59.899 61.111 17.12 0.00 42.15 3.34
374 376 2.276201 TGCAGGAAAATCGATGGTACG 58.724 47.619 0.00 0.00 0.00 3.67
376 378 2.901249 CAGGAAAATCGATGGTACGGT 58.099 47.619 0.00 0.00 0.00 4.83
377 379 3.738899 GCAGGAAAATCGATGGTACGGTA 60.739 47.826 0.00 0.00 0.00 4.02
386 388 2.354510 CGATGGTACGGTAGGAACGTAA 59.645 50.000 0.00 0.00 46.77 3.18
404 406 0.732571 AAGGCATACCGCAATTGACG 59.267 50.000 10.34 12.10 45.17 4.35
447 449 2.141781 CGTCGTGCGAATCTTGTGT 58.858 52.632 0.00 0.00 44.77 3.72
450 452 1.792949 GTCGTGCGAATCTTGTGTTCT 59.207 47.619 0.00 0.00 0.00 3.01
505 508 4.779733 GAGCGGTGGGAGGAGGGA 62.780 72.222 0.00 0.00 0.00 4.20
510 513 1.081277 GGTGGGAGGAGGGAAGAGT 59.919 63.158 0.00 0.00 0.00 3.24
514 517 1.199615 GGGAGGAGGGAAGAGTGAAG 58.800 60.000 0.00 0.00 0.00 3.02
528 531 1.980765 AGTGAAGCAGTGGGAGAATGA 59.019 47.619 0.00 0.00 0.00 2.57
534 537 0.824109 CAGTGGGAGAATGAGCGGTA 59.176 55.000 0.00 0.00 0.00 4.02
548 551 2.040779 GGTAGGAGGAGGGGGTGG 60.041 72.222 0.00 0.00 0.00 4.61
559 562 4.382320 GGGGTGGCGCGAGTTACA 62.382 66.667 12.10 0.00 0.00 2.41
560 563 2.357760 GGGTGGCGCGAGTTACAA 60.358 61.111 12.10 0.00 0.00 2.41
565 568 2.468532 GCGCGAGTTACAACACCG 59.531 61.111 12.10 0.00 0.00 4.94
569 572 1.655325 CGCGAGTTACAACACCGTTTG 60.655 52.381 0.00 0.00 32.49 2.93
570 573 1.333435 GCGAGTTACAACACCGTTTGG 60.333 52.381 0.00 0.00 42.84 3.28
592 595 2.224113 GGAACCAACACGACTTCTACCA 60.224 50.000 0.00 0.00 0.00 3.25
594 597 1.269413 ACCAACACGACTTCTACCACG 60.269 52.381 0.00 0.00 0.00 4.94
602 605 1.214589 CTTCTACCACGTGTCCCCG 59.785 63.158 15.65 0.51 0.00 5.73
611 614 2.515057 GTGTCCCCGTGTGTGCAA 60.515 61.111 0.00 0.00 0.00 4.08
628 631 2.039613 TGCAACTGTCATCACCCACATA 59.960 45.455 0.00 0.00 0.00 2.29
659 662 0.815615 ATCCCTCGAATTTGGCTCGC 60.816 55.000 0.00 0.00 36.25 5.03
689 692 4.592179 GCTCGATTTTAGCATTCCTCAAC 58.408 43.478 0.00 0.00 39.83 3.18
703 706 0.746063 CTCAACAGCCAAGCCAACAA 59.254 50.000 0.00 0.00 0.00 2.83
756 760 1.171308 CTGGTTGAGGTTGATGCAGG 58.829 55.000 0.00 0.00 0.00 4.85
757 761 0.895100 TGGTTGAGGTTGATGCAGGC 60.895 55.000 0.00 0.00 0.00 4.85
759 3155 0.524862 GTTGAGGTTGATGCAGGCAG 59.475 55.000 0.00 0.00 0.00 4.85
781 3177 2.069273 CAAACAGCCCTAGAGTGAACG 58.931 52.381 0.00 0.00 0.00 3.95
800 3196 4.752661 ACGGTATGTGCGTGTTAAAAAT 57.247 36.364 0.00 0.00 0.00 1.82
816 3212 7.934665 GTGTTAAAAATGGAAAACCCCACTTAT 59.065 33.333 0.00 0.00 39.34 1.73
853 3249 0.657659 CTACGACTACGAGCGCCATG 60.658 60.000 2.29 0.00 42.66 3.66
914 3445 5.007724 GCATAATAAAAGGAGACGTTGGAGG 59.992 44.000 0.00 0.00 30.42 4.30
1425 6324 6.128035 TGGTTGATGATTTGTTGAGTAATCCG 60.128 38.462 0.00 0.00 31.29 4.18
1539 6438 3.782369 CGATTTCGTGTGCATCTCATTTG 59.218 43.478 0.00 0.00 34.11 2.32
1575 6476 9.763465 CTGGAAACAAAATTAAATATCGTACGT 57.237 29.630 16.05 5.39 42.06 3.57
1598 6499 9.396022 ACGTACATATGAGATTTCCTGATTTTT 57.604 29.630 10.38 0.00 0.00 1.94
1618 6519 2.658268 GGCCTGCGTGTTTGTTGC 60.658 61.111 0.00 0.00 0.00 4.17
1736 6642 9.889128 ATATATAAGTAGTACTCTCTCCGTTCC 57.111 37.037 2.58 0.00 0.00 3.62
1737 6643 3.996921 AGTAGTACTCTCTCCGTTCCA 57.003 47.619 0.00 0.00 0.00 3.53
1738 6644 4.298103 AGTAGTACTCTCTCCGTTCCAA 57.702 45.455 0.00 0.00 0.00 3.53
1739 6645 4.660168 AGTAGTACTCTCTCCGTTCCAAA 58.340 43.478 0.00 0.00 0.00 3.28
1740 6646 5.075493 AGTAGTACTCTCTCCGTTCCAAAA 58.925 41.667 0.00 0.00 0.00 2.44
1741 6647 5.715753 AGTAGTACTCTCTCCGTTCCAAAAT 59.284 40.000 0.00 0.00 0.00 1.82
1742 6648 6.888632 AGTAGTACTCTCTCCGTTCCAAAATA 59.111 38.462 0.00 0.00 0.00 1.40
1743 6649 6.210287 AGTACTCTCTCCGTTCCAAAATAG 57.790 41.667 0.00 0.00 0.00 1.73
1744 6650 5.950549 AGTACTCTCTCCGTTCCAAAATAGA 59.049 40.000 0.00 0.00 0.00 1.98
1745 6651 5.941555 ACTCTCTCCGTTCCAAAATAGAT 57.058 39.130 0.00 0.00 0.00 1.98
1746 6652 5.665459 ACTCTCTCCGTTCCAAAATAGATG 58.335 41.667 0.00 0.00 0.00 2.90
1747 6653 5.422331 ACTCTCTCCGTTCCAAAATAGATGA 59.578 40.000 0.00 0.00 0.00 2.92
1748 6654 5.661458 TCTCTCCGTTCCAAAATAGATGAC 58.339 41.667 0.00 0.00 0.00 3.06
1749 6655 5.422331 TCTCTCCGTTCCAAAATAGATGACT 59.578 40.000 0.00 0.00 0.00 3.41
1750 6656 5.661458 TCTCCGTTCCAAAATAGATGACTC 58.339 41.667 0.00 0.00 0.00 3.36
1751 6657 5.186992 TCTCCGTTCCAAAATAGATGACTCA 59.813 40.000 0.00 0.00 0.00 3.41
1752 6658 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1753 6659 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
1754 6660 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
1755 6661 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
1756 6662 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
1757 6663 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
1758 6664 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
1759 6665 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
1760 6666 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
1761 6667 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
1787 6693 6.338937 ACTTTAATGATGTACTCCCTTCGTC 58.661 40.000 0.00 0.00 0.00 4.20
1788 6694 3.438297 AATGATGTACTCCCTTCGTCG 57.562 47.619 0.00 0.00 0.00 5.12
1789 6695 1.100510 TGATGTACTCCCTTCGTCGG 58.899 55.000 0.00 0.00 0.00 4.79
1790 6696 0.384669 GATGTACTCCCTTCGTCGGG 59.615 60.000 5.56 5.56 46.13 5.14
1802 6708 3.984508 TTCGTCGGGAAGATACATCTC 57.015 47.619 0.00 0.00 35.76 2.75
1803 6709 2.228059 TCGTCGGGAAGATACATCTCC 58.772 52.381 0.00 0.00 35.76 3.71
1805 6711 2.623889 CGTCGGGAAGATACATCTCCTT 59.376 50.000 0.00 0.00 35.76 3.36
1806 6712 3.068307 CGTCGGGAAGATACATCTCCTTT 59.932 47.826 0.00 0.00 35.76 3.11
1807 6713 4.441634 CGTCGGGAAGATACATCTCCTTTT 60.442 45.833 0.00 0.00 35.76 2.27
1808 6714 5.221185 CGTCGGGAAGATACATCTCCTTTTA 60.221 44.000 0.00 0.00 35.76 1.52
1809 6715 6.516860 CGTCGGGAAGATACATCTCCTTTTAT 60.517 42.308 0.00 0.00 35.76 1.40
1810 6716 6.869388 GTCGGGAAGATACATCTCCTTTTATC 59.131 42.308 0.00 0.00 35.76 1.75
1811 6717 6.782988 TCGGGAAGATACATCTCCTTTTATCT 59.217 38.462 0.00 0.00 35.76 1.98
1812 6718 7.948447 TCGGGAAGATACATCTCCTTTTATCTA 59.052 37.037 0.00 0.00 35.76 1.98
1835 6741 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
1840 6828 9.757227 TTTGATGACAAGTATTTTCGGAATTTT 57.243 25.926 0.00 0.00 37.32 1.82
1841 6829 8.964420 TGATGACAAGTATTTTCGGAATTTTC 57.036 30.769 0.00 0.00 0.00 2.29
1843 6831 6.375377 TGACAAGTATTTTCGGAATTTTCGG 58.625 36.000 0.00 0.00 0.00 4.30
1849 6837 1.717194 TTCGGAATTTTCGGACGGAG 58.283 50.000 0.00 0.00 36.45 4.63
1901 6891 4.371855 TGATTTTGTTGTTGCCACGTAA 57.628 36.364 0.00 0.00 0.00 3.18
1940 6930 4.814234 ACACGATTTCAGTTATGTGTGTGT 59.186 37.500 0.00 0.00 38.95 3.72
1941 6931 5.295787 ACACGATTTCAGTTATGTGTGTGTT 59.704 36.000 0.00 0.00 38.95 3.32
1942 6932 6.183360 ACACGATTTCAGTTATGTGTGTGTTT 60.183 34.615 0.00 0.00 38.95 2.83
1943 6933 6.690957 CACGATTTCAGTTATGTGTGTGTTTT 59.309 34.615 0.00 0.00 0.00 2.43
1944 6934 6.690957 ACGATTTCAGTTATGTGTGTGTTTTG 59.309 34.615 0.00 0.00 0.00 2.44
1945 6935 6.690957 CGATTTCAGTTATGTGTGTGTTTTGT 59.309 34.615 0.00 0.00 0.00 2.83
1946 6936 7.853437 CGATTTCAGTTATGTGTGTGTTTTGTA 59.147 33.333 0.00 0.00 0.00 2.41
1947 6937 8.850454 ATTTCAGTTATGTGTGTGTTTTGTAC 57.150 30.769 0.00 0.00 0.00 2.90
1948 6938 7.618502 TTCAGTTATGTGTGTGTTTTGTACT 57.381 32.000 0.00 0.00 0.00 2.73
1949 6939 7.618502 TCAGTTATGTGTGTGTTTTGTACTT 57.381 32.000 0.00 0.00 0.00 2.24
1950 6940 8.046294 TCAGTTATGTGTGTGTTTTGTACTTT 57.954 30.769 0.00 0.00 0.00 2.66
1951 6941 8.516234 TCAGTTATGTGTGTGTTTTGTACTTTT 58.484 29.630 0.00 0.00 0.00 2.27
1952 6942 8.582930 CAGTTATGTGTGTGTTTTGTACTTTTG 58.417 33.333 0.00 0.00 0.00 2.44
1953 6943 7.757624 AGTTATGTGTGTGTTTTGTACTTTTGG 59.242 33.333 0.00 0.00 0.00 3.28
1954 6944 5.455056 TGTGTGTGTTTTGTACTTTTGGT 57.545 34.783 0.00 0.00 0.00 3.67
1955 6945 6.570672 TGTGTGTGTTTTGTACTTTTGGTA 57.429 33.333 0.00 0.00 0.00 3.25
1956 6946 6.613233 TGTGTGTGTTTTGTACTTTTGGTAG 58.387 36.000 0.00 0.00 0.00 3.18
1957 6947 6.207025 TGTGTGTGTTTTGTACTTTTGGTAGT 59.793 34.615 0.00 0.00 0.00 2.73
1981 6971 5.186198 ACAGTGCTACCATAAGGATGAAAC 58.814 41.667 0.00 0.00 38.69 2.78
2030 7020 5.437060 AGTACTGTGTTTGATTTGTGGACT 58.563 37.500 0.00 0.00 0.00 3.85
2224 7214 3.053826 GGGGTCCCTAAGGTAATCATGT 58.946 50.000 8.15 0.00 0.00 3.21
2494 7544 6.106877 CGTCAACGTCTTAATGGAATGAAT 57.893 37.500 0.00 0.00 34.11 2.57
2626 7688 1.409064 TGCTGTCCTGCTCGGTAATAG 59.591 52.381 0.00 0.00 0.00 1.73
2779 7841 6.331369 TCCTGTCTTTTATTGCCTTCTTTG 57.669 37.500 0.00 0.00 0.00 2.77
3715 9098 5.009010 TCAACTCTTTGAGCTTGATCAAACC 59.991 40.000 9.88 3.74 42.68 3.27
3719 9102 6.041296 ACTCTTTGAGCTTGATCAAACCAAAT 59.959 34.615 20.32 10.34 42.68 2.32
3802 9186 0.813184 GCACAGCCATGCACTATTGT 59.187 50.000 4.95 0.00 45.39 2.71
3846 9230 1.193323 CCATGCATTTAACTGGGCCA 58.807 50.000 5.85 5.85 0.00 5.36
3894 9278 8.996541 GCTGTAAACTGCATCCTGTAGTAACAG 61.997 44.444 22.31 22.31 46.86 3.16
3941 9325 0.906282 CCATGGAGCTTTGGGGCTTT 60.906 55.000 5.56 0.00 43.20 3.51
4383 10199 3.913509 TGGTTCCCATGTGATGCAATAT 58.086 40.909 0.00 0.00 0.00 1.28
4728 10564 2.304180 TGAGAGCTCCCCTGAGAAAAAG 59.696 50.000 10.93 0.00 41.42 2.27
4928 10771 4.378459 GCTCTATTTGACTTTGGTTGGTCG 60.378 45.833 0.00 0.00 35.45 4.79
4984 10832 4.622740 GTGTTTTGCTGTTGCCTATTGATC 59.377 41.667 0.00 0.00 38.71 2.92
4985 10833 4.280425 TGTTTTGCTGTTGCCTATTGATCA 59.720 37.500 0.00 0.00 38.71 2.92
4986 10834 5.047164 TGTTTTGCTGTTGCCTATTGATCAT 60.047 36.000 0.00 0.00 38.71 2.45
4987 10835 6.152492 TGTTTTGCTGTTGCCTATTGATCATA 59.848 34.615 0.00 0.00 38.71 2.15
4988 10836 6.964807 TTTGCTGTTGCCTATTGATCATAT 57.035 33.333 0.00 0.00 38.71 1.78
4989 10837 5.952526 TGCTGTTGCCTATTGATCATATG 57.047 39.130 0.00 0.00 38.71 1.78
4990 10838 5.379187 TGCTGTTGCCTATTGATCATATGT 58.621 37.500 1.90 0.00 38.71 2.29
4991 10839 5.829391 TGCTGTTGCCTATTGATCATATGTT 59.171 36.000 1.90 0.00 38.71 2.71
4992 10840 6.997476 TGCTGTTGCCTATTGATCATATGTTA 59.003 34.615 1.90 0.00 38.71 2.41
4993 10841 7.501892 TGCTGTTGCCTATTGATCATATGTTAA 59.498 33.333 1.90 0.00 38.71 2.01
4994 10842 8.517878 GCTGTTGCCTATTGATCATATGTTAAT 58.482 33.333 1.90 5.12 0.00 1.40
5026 10874 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
5027 10875 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
5028 10876 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
5029 10877 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
5030 10878 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
5036 10884 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
5037 10885 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
5038 10886 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
5039 10887 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
5042 10890 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
5054 10902 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
5055 10903 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
5056 10904 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
5057 10905 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
5058 10906 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
5059 10907 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
5060 10908 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
5061 10909 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
5062 10910 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
5063 10911 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
5064 10912 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
5065 10913 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
5066 10914 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
5067 10915 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
5068 10916 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
5069 10917 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
5070 10918 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
5071 10919 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
5072 10920 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
5082 10930 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
5083 10931 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
5084 10932 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
5085 10933 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
5086 10934 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
5087 10935 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
5088 10936 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
5089 10937 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
5090 10938 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
5091 10939 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
5092 10940 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
5093 10941 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
5094 10942 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
5095 10943 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
5096 10944 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
5097 10945 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
5098 10946 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
5099 10947 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
5100 10948 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
5101 10949 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
5102 10950 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
5103 10951 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
5104 10952 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
5105 10953 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
5106 10954 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
5107 10955 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
5108 10956 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
5120 10968 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
5121 10969 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
5122 10970 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
5123 10971 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
5124 10972 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
5125 10973 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
5126 10974 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
5127 10975 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
5128 10976 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
5129 10977 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
5130 10978 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
5131 10979 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
5132 10980 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
5133 10981 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
5134 10982 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
5135 10983 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
5136 10984 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
5137 10985 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
5138 10986 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
5139 10987 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
5140 10988 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
5141 10989 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
5153 11001 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
5154 11002 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
5155 11003 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
5156 11004 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
5157 11005 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
5158 11006 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
5159 11007 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
5160 11008 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
5161 11009 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
5162 11010 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
5163 11011 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
5164 11012 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
5165 11013 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
5166 11014 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
5167 11015 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
5168 11016 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
5172 11020 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
5173 11021 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
5174 11022 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
5175 11023 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
5176 11024 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
5177 11025 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
5178 11026 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
5179 11027 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
5239 11097 8.635765 AATTCTTTAGATTTGCTTCCAGTACA 57.364 30.769 0.00 0.00 0.00 2.90
5373 11260 5.003160 TCTGTTCCAGTTACATGTCCATTG 58.997 41.667 0.00 0.00 32.61 2.82
5447 11334 7.994425 TTATGCTTTTGAATAGGTCAAGTGA 57.006 32.000 0.00 0.00 46.85 3.41
5754 11647 7.173218 CGTGGTTCATATAGTTATCAAGGCATT 59.827 37.037 0.00 0.00 0.00 3.56
5771 11664 4.022329 AGGCATTTGTTACTTTGTACCTGC 60.022 41.667 0.00 0.00 0.00 4.85
5776 11669 5.682943 TTGTTACTTTGTACCTGCATGAC 57.317 39.130 0.00 0.00 0.00 3.06
5841 11735 9.482627 AACTATTCAGGATCGATATTTTCTGTC 57.517 33.333 0.00 0.00 0.00 3.51
5937 11876 9.618890 GTCATATGGGATATAATGCAGTATTGT 57.381 33.333 12.49 1.76 0.00 2.71
6731 12975 0.179137 TGTTGCTATCGCTGTCGGAG 60.179 55.000 0.00 0.00 36.97 4.63
6749 12993 3.433031 CGGAGGTGGGCTATATTTCACAA 60.433 47.826 0.00 0.00 32.29 3.33
6789 13036 6.092122 CACCGACTGTTACACATATGAACATT 59.908 38.462 10.38 4.15 32.89 2.71
7049 13574 7.661847 AGCCTATACAAATGCATTAAGTAGACC 59.338 37.037 21.76 13.12 0.00 3.85
7087 13613 6.231211 ACAATCAGAACCTTACAAGTACCAG 58.769 40.000 0.00 0.00 0.00 4.00
7095 13621 3.935203 CCTTACAAGTACCAGCAGACATG 59.065 47.826 0.00 0.00 0.00 3.21
7109 13635 4.357018 CAGACATGCTACGTACAGAGAA 57.643 45.455 0.00 0.00 0.00 2.87
7110 13636 4.733850 CAGACATGCTACGTACAGAGAAA 58.266 43.478 0.00 0.00 0.00 2.52
7111 13637 5.344066 CAGACATGCTACGTACAGAGAAAT 58.656 41.667 0.00 0.00 0.00 2.17
7112 13638 5.457148 CAGACATGCTACGTACAGAGAAATC 59.543 44.000 0.00 0.00 0.00 2.17
7113 13639 5.358442 AGACATGCTACGTACAGAGAAATCT 59.642 40.000 0.00 0.00 0.00 2.40
7114 13640 5.967088 ACATGCTACGTACAGAGAAATCTT 58.033 37.500 0.00 0.00 0.00 2.40
7115 13641 5.807520 ACATGCTACGTACAGAGAAATCTTG 59.192 40.000 0.00 0.00 0.00 3.02
7139 13665 2.207788 ATTACCTTTGGCGGCGCAAC 62.208 55.000 34.36 17.93 0.00 4.17
7175 13701 4.261801 CGAGGAATTTCCAGCCTAAAGAA 58.738 43.478 17.57 0.00 39.61 2.52
7176 13702 4.095036 CGAGGAATTTCCAGCCTAAAGAAC 59.905 45.833 17.57 0.00 39.61 3.01
7177 13703 4.998051 AGGAATTTCCAGCCTAAAGAACA 58.002 39.130 17.57 0.00 39.61 3.18
7178 13704 5.012893 AGGAATTTCCAGCCTAAAGAACAG 58.987 41.667 17.57 0.00 39.61 3.16
7181 13707 1.742308 TCCAGCCTAAAGAACAGGGT 58.258 50.000 0.00 0.00 44.68 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.531948 CGAAGGTAAGTCTCTAAAGTTCATGG 59.468 42.308 0.00 0.00 0.00 3.66
52 53 7.314393 GTCGAAGGTAAGTCTCTAAAGTTCAT 58.686 38.462 0.00 0.00 0.00 2.57
58 59 6.240894 TGTAGGTCGAAGGTAAGTCTCTAAA 58.759 40.000 0.00 0.00 0.00 1.85
70 71 1.883084 GCGGCATGTAGGTCGAAGG 60.883 63.158 0.00 0.00 38.35 3.46
72 73 1.141019 GAGCGGCATGTAGGTCGAA 59.859 57.895 1.45 0.00 38.35 3.71
74 75 1.589993 CTGAGCGGCATGTAGGTCG 60.590 63.158 1.45 0.00 37.66 4.79
117 119 2.093106 ACTTCGGATATAGCCTAGCGG 58.907 52.381 5.31 0.00 0.00 5.52
131 133 5.006649 TCGAATCAATTAATCAGCACTTCGG 59.993 40.000 0.00 0.00 35.11 4.30
144 146 6.885952 TTGAACAAACCCTCGAATCAATTA 57.114 33.333 0.00 0.00 0.00 1.40
148 150 4.561735 GTTTGAACAAACCCTCGAATCA 57.438 40.909 16.54 0.00 43.52 2.57
183 185 0.035739 GGTATTCACACACACGGGGT 59.964 55.000 0.00 0.00 0.00 4.95
187 189 1.068125 TCGAGGGTATTCACACACACG 60.068 52.381 0.00 0.00 0.00 4.49
188 190 2.736144 TCGAGGGTATTCACACACAC 57.264 50.000 0.00 0.00 0.00 3.82
219 221 5.943349 TCTAGGACCAATTGAACCGATTA 57.057 39.130 7.12 0.00 0.00 1.75
230 232 5.544562 GGTTAGGCTTCTATCTAGGACCAAT 59.455 44.000 0.00 0.00 0.00 3.16
233 235 4.743124 AGGTTAGGCTTCTATCTAGGACC 58.257 47.826 0.00 0.00 0.00 4.46
296 298 4.536687 CGATTTTCCTGCGGCCGC 62.537 66.667 42.35 42.35 42.35 6.53
303 305 3.073678 TCACACACCATCGATTTTCCTG 58.926 45.455 0.00 0.00 0.00 3.86
314 316 5.809001 ACTTGATTGTAGATCACACACCAT 58.191 37.500 0.00 0.00 36.69 3.55
315 317 5.227569 ACTTGATTGTAGATCACACACCA 57.772 39.130 0.00 0.00 36.69 4.17
316 318 8.942338 TTATACTTGATTGTAGATCACACACC 57.058 34.615 0.00 0.00 36.69 4.16
325 327 9.177304 CGCGTTAGATTTATACTTGATTGTAGA 57.823 33.333 0.00 0.00 0.00 2.59
326 328 8.425491 CCGCGTTAGATTTATACTTGATTGTAG 58.575 37.037 4.92 0.00 0.00 2.74
327 329 7.095940 GCCGCGTTAGATTTATACTTGATTGTA 60.096 37.037 4.92 0.00 0.00 2.41
328 330 6.292703 GCCGCGTTAGATTTATACTTGATTGT 60.293 38.462 4.92 0.00 0.00 2.71
329 331 6.071463 GCCGCGTTAGATTTATACTTGATTG 58.929 40.000 4.92 0.00 0.00 2.67
330 332 5.989777 AGCCGCGTTAGATTTATACTTGATT 59.010 36.000 4.92 0.00 0.00 2.57
331 333 5.405571 CAGCCGCGTTAGATTTATACTTGAT 59.594 40.000 4.92 0.00 0.00 2.57
332 334 4.743151 CAGCCGCGTTAGATTTATACTTGA 59.257 41.667 4.92 0.00 0.00 3.02
333 335 4.608445 GCAGCCGCGTTAGATTTATACTTG 60.608 45.833 4.92 0.00 0.00 3.16
334 336 3.493503 GCAGCCGCGTTAGATTTATACTT 59.506 43.478 4.92 0.00 0.00 2.24
335 337 3.057734 GCAGCCGCGTTAGATTTATACT 58.942 45.455 4.92 0.00 0.00 2.12
336 338 2.798283 TGCAGCCGCGTTAGATTTATAC 59.202 45.455 4.92 0.00 42.97 1.47
337 339 3.057019 CTGCAGCCGCGTTAGATTTATA 58.943 45.455 4.92 0.00 42.97 0.98
338 340 1.867233 CTGCAGCCGCGTTAGATTTAT 59.133 47.619 4.92 0.00 42.97 1.40
339 341 1.286501 CTGCAGCCGCGTTAGATTTA 58.713 50.000 4.92 0.00 42.97 1.40
340 342 1.369091 CCTGCAGCCGCGTTAGATTT 61.369 55.000 8.66 0.00 42.97 2.17
341 343 1.815421 CCTGCAGCCGCGTTAGATT 60.815 57.895 8.66 0.00 42.97 2.40
342 344 2.202932 CCTGCAGCCGCGTTAGAT 60.203 61.111 8.66 0.00 42.97 1.98
343 345 2.443260 TTTCCTGCAGCCGCGTTAGA 62.443 55.000 8.66 0.00 42.97 2.10
344 346 1.573829 TTTTCCTGCAGCCGCGTTAG 61.574 55.000 8.66 0.00 42.97 2.34
345 347 0.958382 ATTTTCCTGCAGCCGCGTTA 60.958 50.000 8.66 0.00 42.97 3.18
346 348 2.200170 GATTTTCCTGCAGCCGCGTT 62.200 55.000 8.66 0.00 42.97 4.84
347 349 2.672996 ATTTTCCTGCAGCCGCGT 60.673 55.556 8.66 0.00 42.97 6.01
348 350 2.100991 GATTTTCCTGCAGCCGCG 59.899 61.111 8.66 0.00 42.97 6.46
349 351 1.718757 ATCGATTTTCCTGCAGCCGC 61.719 55.000 8.66 0.00 39.24 6.53
350 352 0.028505 CATCGATTTTCCTGCAGCCG 59.971 55.000 8.66 4.51 0.00 5.52
351 353 0.383231 CCATCGATTTTCCTGCAGCC 59.617 55.000 8.66 0.00 0.00 4.85
352 354 1.098050 ACCATCGATTTTCCTGCAGC 58.902 50.000 8.66 0.00 0.00 5.25
353 355 2.285220 CGTACCATCGATTTTCCTGCAG 59.715 50.000 6.78 6.78 0.00 4.41
354 356 2.276201 CGTACCATCGATTTTCCTGCA 58.724 47.619 0.00 0.00 0.00 4.41
355 357 1.597663 CCGTACCATCGATTTTCCTGC 59.402 52.381 0.00 0.00 0.00 4.85
356 358 2.901249 ACCGTACCATCGATTTTCCTG 58.099 47.619 0.00 0.00 0.00 3.86
357 359 3.069158 CCTACCGTACCATCGATTTTCCT 59.931 47.826 0.00 0.00 0.00 3.36
358 360 3.068590 TCCTACCGTACCATCGATTTTCC 59.931 47.826 0.00 0.00 0.00 3.13
359 361 4.311816 TCCTACCGTACCATCGATTTTC 57.688 45.455 0.00 0.00 0.00 2.29
360 362 4.436332 GTTCCTACCGTACCATCGATTTT 58.564 43.478 0.00 0.00 0.00 1.82
361 363 3.489738 CGTTCCTACCGTACCATCGATTT 60.490 47.826 0.00 0.00 0.00 2.17
362 364 2.033801 CGTTCCTACCGTACCATCGATT 59.966 50.000 0.00 0.00 0.00 3.34
363 365 1.605710 CGTTCCTACCGTACCATCGAT 59.394 52.381 0.00 0.00 0.00 3.59
364 366 1.016627 CGTTCCTACCGTACCATCGA 58.983 55.000 0.00 0.00 0.00 3.59
365 367 0.734889 ACGTTCCTACCGTACCATCG 59.265 55.000 0.00 0.00 36.65 3.84
366 368 3.243201 CCTTACGTTCCTACCGTACCATC 60.243 52.174 0.00 0.00 40.20 3.51
374 376 2.544486 CGGTATGCCTTACGTTCCTACC 60.544 54.545 0.00 0.00 0.00 3.18
376 378 1.067516 GCGGTATGCCTTACGTTCCTA 59.932 52.381 0.00 0.00 37.76 2.94
377 379 0.179092 GCGGTATGCCTTACGTTCCT 60.179 55.000 0.00 0.00 37.76 3.36
384 386 1.937223 CGTCAATTGCGGTATGCCTTA 59.063 47.619 12.53 0.00 45.60 2.69
386 388 1.714899 GCGTCAATTGCGGTATGCCT 61.715 55.000 19.06 0.00 45.60 4.75
431 433 2.058798 GAGAACACAAGATTCGCACGA 58.941 47.619 0.00 0.00 0.00 4.35
447 449 2.215942 TCTGTCTCATCGGTGGAGAA 57.784 50.000 0.00 0.00 42.63 2.87
450 452 2.493675 CTCTTTCTGTCTCATCGGTGGA 59.506 50.000 0.00 0.00 0.00 4.02
505 508 1.722034 TCTCCCACTGCTTCACTCTT 58.278 50.000 0.00 0.00 0.00 2.85
510 513 1.339438 GCTCATTCTCCCACTGCTTCA 60.339 52.381 0.00 0.00 0.00 3.02
514 517 1.817099 CCGCTCATTCTCCCACTGC 60.817 63.158 0.00 0.00 0.00 4.40
528 531 4.159108 CCCCCTCCTCCTACCGCT 62.159 72.222 0.00 0.00 0.00 5.52
548 551 1.824272 AACGGTGTTGTAACTCGCGC 61.824 55.000 0.00 0.00 32.60 6.86
551 554 1.262151 CCCAAACGGTGTTGTAACTCG 59.738 52.381 8.60 8.60 34.40 4.18
559 562 1.306970 TGGTTCCCCAAACGGTGTT 59.693 52.632 0.00 0.00 37.98 3.32
560 563 3.008408 TGGTTCCCCAAACGGTGT 58.992 55.556 0.00 0.00 37.98 4.16
569 572 0.108019 AGAAGTCGTGTTGGTTCCCC 59.892 55.000 0.00 0.00 0.00 4.81
570 573 2.410939 GTAGAAGTCGTGTTGGTTCCC 58.589 52.381 0.00 0.00 0.00 3.97
594 597 2.515057 TTGCACACACGGGGACAC 60.515 61.111 0.00 0.00 0.00 3.67
602 605 1.002468 GGTGATGACAGTTGCACACAC 60.002 52.381 0.00 0.00 33.09 3.82
611 614 1.405526 GCGTATGTGGGTGATGACAGT 60.406 52.381 0.00 0.00 0.00 3.55
648 651 1.930371 GCGTTTTCAGCGAGCCAAATT 60.930 47.619 0.00 0.00 0.00 1.82
659 662 4.065423 TGCTAAAATCGAGCGTTTTCAG 57.935 40.909 0.00 0.00 43.19 3.02
689 692 0.177604 TTTGGTTGTTGGCTTGGCTG 59.822 50.000 0.00 0.00 0.00 4.85
729 733 3.403624 CCTCAACCAGGCCAGCTA 58.596 61.111 5.01 0.00 34.56 3.32
756 760 1.002134 TCTAGGGCTGTTTGGCTGC 60.002 57.895 0.00 0.00 41.48 5.25
757 761 0.326264 ACTCTAGGGCTGTTTGGCTG 59.674 55.000 0.00 0.00 41.48 4.85
759 3155 0.324943 TCACTCTAGGGCTGTTTGGC 59.675 55.000 0.00 0.00 40.96 4.52
781 3177 5.049398 TCCATTTTTAACACGCACATACC 57.951 39.130 0.00 0.00 0.00 2.73
800 3196 4.761227 GTCGTAAATAAGTGGGGTTTTCCA 59.239 41.667 0.00 0.00 42.91 3.53
816 3212 2.060370 GGTGGGACCTGGTCGTAAA 58.940 57.895 19.98 3.27 34.73 2.01
914 3445 2.947532 GCTGGGGCAAAGGGAAAGC 61.948 63.158 0.00 0.00 38.54 3.51
1425 6324 4.601019 CCAATCATAGTTCAATTGCGGTC 58.399 43.478 0.00 0.00 0.00 4.79
1535 6434 5.999205 TGTTTCCAGTTCATATGCCAAAT 57.001 34.783 0.00 0.00 0.00 2.32
1539 6438 8.770438 TTAATTTTGTTTCCAGTTCATATGCC 57.230 30.769 0.00 0.00 0.00 4.40
1570 6471 9.477484 AAATCAGGAAATCTCATATGTACGTAC 57.523 33.333 18.90 18.90 0.00 3.67
1575 6476 9.135189 CCCAAAAATCAGGAAATCTCATATGTA 57.865 33.333 1.90 0.00 0.00 2.29
1576 6477 7.070322 CCCCAAAAATCAGGAAATCTCATATGT 59.930 37.037 1.90 0.00 0.00 2.29
1577 6478 7.439381 CCCCAAAAATCAGGAAATCTCATATG 58.561 38.462 0.00 0.00 0.00 1.78
1598 6499 4.514585 ACAAACACGCAGGCCCCA 62.515 61.111 0.00 0.00 0.00 4.96
1718 6624 5.382618 TTTTGGAACGGAGAGAGTACTAC 57.617 43.478 0.00 0.00 0.00 2.73
1724 6630 5.751028 GTCATCTATTTTGGAACGGAGAGAG 59.249 44.000 0.00 0.00 0.00 3.20
1725 6631 5.422331 AGTCATCTATTTTGGAACGGAGAGA 59.578 40.000 0.00 0.00 0.00 3.10
1726 6632 5.665459 AGTCATCTATTTTGGAACGGAGAG 58.335 41.667 0.00 0.00 0.00 3.20
1727 6633 5.186992 TGAGTCATCTATTTTGGAACGGAGA 59.813 40.000 0.00 0.00 0.00 3.71
1728 6634 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1729 6635 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1730 6636 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
1731 6637 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
1732 6638 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
1733 6639 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
1734 6640 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
1735 6641 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
1755 6661 9.880157 GGGAGTACATCATTAAAGTTAGTACAA 57.120 33.333 0.00 0.00 34.41 2.41
1756 6662 9.263446 AGGGAGTACATCATTAAAGTTAGTACA 57.737 33.333 0.00 0.00 34.41 2.90
1759 6665 7.980099 CGAAGGGAGTACATCATTAAAGTTAGT 59.020 37.037 0.00 0.00 0.00 2.24
1760 6666 7.980099 ACGAAGGGAGTACATCATTAAAGTTAG 59.020 37.037 0.00 0.00 0.00 2.34
1761 6667 7.844009 ACGAAGGGAGTACATCATTAAAGTTA 58.156 34.615 0.00 0.00 0.00 2.24
1762 6668 6.708285 ACGAAGGGAGTACATCATTAAAGTT 58.292 36.000 0.00 0.00 0.00 2.66
1763 6669 6.295719 ACGAAGGGAGTACATCATTAAAGT 57.704 37.500 0.00 0.00 0.00 2.66
1764 6670 5.459107 CGACGAAGGGAGTACATCATTAAAG 59.541 44.000 0.00 0.00 0.00 1.85
1765 6671 5.345702 CGACGAAGGGAGTACATCATTAAA 58.654 41.667 0.00 0.00 0.00 1.52
1766 6672 4.202080 CCGACGAAGGGAGTACATCATTAA 60.202 45.833 0.00 0.00 0.00 1.40
1783 6689 2.158652 AGGAGATGTATCTTCCCGACGA 60.159 50.000 0.00 0.00 37.25 4.20
1787 6693 6.998802 AGATAAAAGGAGATGTATCTTCCCG 58.001 40.000 0.00 0.00 37.25 5.14
1809 6715 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
1812 6718 9.927668 AATTCCGAAAATACTTGTCATCAAAAT 57.072 25.926 0.00 0.00 32.87 1.82
1814 6720 9.757227 AAAATTCCGAAAATACTTGTCATCAAA 57.243 25.926 0.00 0.00 32.87 2.69
1815 6721 9.405587 GAAAATTCCGAAAATACTTGTCATCAA 57.594 29.630 0.00 0.00 0.00 2.57
1816 6722 7.748683 CGAAAATTCCGAAAATACTTGTCATCA 59.251 33.333 0.00 0.00 0.00 3.07
1817 6723 7.218204 CCGAAAATTCCGAAAATACTTGTCATC 59.782 37.037 2.26 0.00 0.00 2.92
1818 6724 7.027161 CCGAAAATTCCGAAAATACTTGTCAT 58.973 34.615 2.26 0.00 0.00 3.06
1819 6725 6.205076 TCCGAAAATTCCGAAAATACTTGTCA 59.795 34.615 2.26 0.00 0.00 3.58
1821 6727 6.376177 GTCCGAAAATTCCGAAAATACTTGT 58.624 36.000 2.26 0.00 0.00 3.16
1822 6728 5.506832 CGTCCGAAAATTCCGAAAATACTTG 59.493 40.000 2.26 0.00 0.00 3.16
1823 6729 5.391203 CCGTCCGAAAATTCCGAAAATACTT 60.391 40.000 2.26 0.00 0.00 2.24
1824 6730 4.093850 CCGTCCGAAAATTCCGAAAATACT 59.906 41.667 2.26 0.00 0.00 2.12
1825 6731 4.093261 TCCGTCCGAAAATTCCGAAAATAC 59.907 41.667 2.26 0.00 0.00 1.89
1826 6732 4.252073 TCCGTCCGAAAATTCCGAAAATA 58.748 39.130 2.26 0.00 0.00 1.40
1827 6733 3.075884 TCCGTCCGAAAATTCCGAAAAT 58.924 40.909 2.26 0.00 0.00 1.82
1828 6734 2.481185 CTCCGTCCGAAAATTCCGAAAA 59.519 45.455 2.26 0.00 0.00 2.29
1829 6735 2.070783 CTCCGTCCGAAAATTCCGAAA 58.929 47.619 2.26 0.00 0.00 3.46
1830 6736 1.673626 CCTCCGTCCGAAAATTCCGAA 60.674 52.381 2.26 0.00 0.00 4.30
1832 6738 1.087771 CCCTCCGTCCGAAAATTCCG 61.088 60.000 0.00 0.00 0.00 4.30
1833 6739 0.251073 TCCCTCCGTCCGAAAATTCC 59.749 55.000 0.00 0.00 0.00 3.01
1835 6741 0.981943 ACTCCCTCCGTCCGAAAATT 59.018 50.000 0.00 0.00 0.00 1.82
1840 6828 2.689983 GTTAATTACTCCCTCCGTCCGA 59.310 50.000 0.00 0.00 0.00 4.55
1841 6829 2.692041 AGTTAATTACTCCCTCCGTCCG 59.308 50.000 0.00 0.00 28.23 4.79
1843 6831 3.118884 TGCAGTTAATTACTCCCTCCGTC 60.119 47.826 0.00 0.00 33.85 4.79
1849 6837 3.939592 GACCAGTGCAGTTAATTACTCCC 59.060 47.826 0.00 0.00 33.85 4.30
1901 6891 1.473965 CGTGTTCATAGAGCCTGCCAT 60.474 52.381 0.00 0.00 0.00 4.40
1953 6943 6.264744 TCATCCTTATGGTAGCACTGTACTAC 59.735 42.308 9.28 9.28 39.44 2.73
1954 6944 6.370453 TCATCCTTATGGTAGCACTGTACTA 58.630 40.000 0.00 0.00 33.61 1.82
1955 6945 5.208890 TCATCCTTATGGTAGCACTGTACT 58.791 41.667 0.00 0.00 33.61 2.73
1956 6946 5.531122 TCATCCTTATGGTAGCACTGTAC 57.469 43.478 0.00 0.00 33.61 2.90
1957 6947 6.156256 AGTTTCATCCTTATGGTAGCACTGTA 59.844 38.462 0.00 0.00 33.61 2.74
1981 6971 0.613853 TCGTCACTAACCCCTCCCAG 60.614 60.000 0.00 0.00 0.00 4.45
2113 7103 5.389830 GCGCAATGTCGTCATACATGAATAT 60.390 40.000 0.30 0.00 39.98 1.28
2124 7114 1.278337 GTTGTGCGCAATGTCGTCA 59.722 52.632 14.00 0.00 36.92 4.35
2494 7544 6.549242 AGGGATGCATGATCATTAGAATTGA 58.451 36.000 2.46 0.00 31.91 2.57
2626 7688 1.961277 CCACCACTCACAGCGGTTC 60.961 63.158 0.00 0.00 25.64 3.62
3742 9125 3.261216 CTCGTGCGTGTGTGTGCA 61.261 61.111 0.00 0.00 39.13 4.57
3846 9230 4.637977 GCCAGCAGAAAAATAGCTCTAGTT 59.362 41.667 0.00 0.00 36.26 2.24
3894 9278 1.956043 TTGCCCTGCAATCGTTGTC 59.044 52.632 0.00 0.00 43.99 3.18
3941 9325 3.505680 ACATGGAGCATTAACAGCGAAAA 59.494 39.130 0.00 0.00 37.01 2.29
4383 10199 2.158475 AGCATTCAGGTCCAAAGAACCA 60.158 45.455 0.00 0.00 39.39 3.67
4820 10657 0.252330 TAGAACCATCGGACCACCCA 60.252 55.000 0.00 0.00 34.14 4.51
4928 10771 8.633075 GCATAAGATAAGAGATGCTGATAGAC 57.367 38.462 0.00 0.00 41.19 2.59
5003 10851 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
5004 10852 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
5005 10853 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
5006 10854 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
5007 10855 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
5008 10856 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
5009 10857 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
5010 10858 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
5011 10859 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
5012 10860 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
5037 10885 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
5038 10886 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
5039 10887 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
5040 10888 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
5041 10889 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
5042 10890 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
5043 10891 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
5044 10892 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
5045 10893 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
5046 10894 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
5047 10895 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
5048 10896 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
5049 10897 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
5050 10898 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
5051 10899 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
5052 10900 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
5053 10901 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
5054 10902 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
5055 10903 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
5056 10904 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
5061 10909 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
5062 10910 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
5063 10911 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
5064 10912 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
5065 10913 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
5066 10914 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
5067 10915 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
5068 10916 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
5069 10917 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
5070 10918 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
5071 10919 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
5072 10920 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
5073 10921 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
5074 10922 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
5075 10923 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
5076 10924 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
5077 10925 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
5078 10926 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
5079 10927 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
5080 10928 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
5081 10929 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
5082 10930 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
5083 10931 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
5084 10932 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
5085 10933 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
5086 10934 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
5087 10935 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
5088 10936 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
5089 10937 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
5090 10938 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
5091 10939 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
5092 10940 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
5093 10941 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
5094 10942 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
5095 10943 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
5096 10944 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
5097 10945 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
5098 10946 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
5112 10960 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
5113 10961 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
5114 10962 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
5115 10963 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
5116 10964 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
5117 10965 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
5118 10966 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
5119 10967 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
5120 10968 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
5121 10969 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
5136 10984 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
5137 10985 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
5138 10986 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
5139 10987 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
5140 10988 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
5141 10989 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
5142 10990 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
5143 10991 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
5144 10992 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
5145 10993 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
5146 10994 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
5147 10995 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
5148 10996 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
5149 10997 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
5150 10998 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
5155 11003 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
5156 11004 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
5157 11005 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
5158 11006 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
5159 11007 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
5160 11008 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
5161 11009 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
5169 11017 1.983119 TATGAAGGGGAGCCTTGGCG 61.983 60.000 5.95 0.00 0.00 5.69
5170 11018 0.480252 ATATGAAGGGGAGCCTTGGC 59.520 55.000 2.97 2.97 0.00 4.52
5171 11019 1.496429 ACATATGAAGGGGAGCCTTGG 59.504 52.381 10.38 0.00 0.00 3.61
5172 11020 3.303351 AACATATGAAGGGGAGCCTTG 57.697 47.619 10.38 0.00 0.00 3.61
5173 11021 5.669798 ATTAACATATGAAGGGGAGCCTT 57.330 39.130 10.38 0.00 0.00 4.35
5174 11022 5.103515 ACAATTAACATATGAAGGGGAGCCT 60.104 40.000 10.38 0.00 0.00 4.58
5175 11023 5.140454 ACAATTAACATATGAAGGGGAGCC 58.860 41.667 10.38 0.00 0.00 4.70
5176 11024 6.715347 AACAATTAACATATGAAGGGGAGC 57.285 37.500 10.38 0.00 0.00 4.70
5177 11025 7.341769 TCCAAACAATTAACATATGAAGGGGAG 59.658 37.037 10.38 0.00 0.00 4.30
5178 11026 7.185565 TCCAAACAATTAACATATGAAGGGGA 58.814 34.615 10.38 0.00 0.00 4.81
5179 11027 7.416964 TCCAAACAATTAACATATGAAGGGG 57.583 36.000 10.38 0.00 0.00 4.79
5180 11028 8.531146 AGTTCCAAACAATTAACATATGAAGGG 58.469 33.333 10.38 0.00 0.00 3.95
5181 11029 9.357652 CAGTTCCAAACAATTAACATATGAAGG 57.642 33.333 10.38 0.00 0.00 3.46
5182 11030 9.357652 CCAGTTCCAAACAATTAACATATGAAG 57.642 33.333 10.38 0.00 0.00 3.02
5183 11031 8.310382 CCCAGTTCCAAACAATTAACATATGAA 58.690 33.333 10.38 0.00 0.00 2.57
5184 11032 7.671819 TCCCAGTTCCAAACAATTAACATATGA 59.328 33.333 10.38 0.00 0.00 2.15
5272 11130 5.543507 TTGTCAGCCAACCAATAACAAAT 57.456 34.783 0.00 0.00 0.00 2.32
5373 11260 8.630917 TGCATTAACTACACTACCTATTCTCTC 58.369 37.037 0.00 0.00 0.00 3.20
5405 11292 1.645402 AAAGTGTGGGTGGAGTGCCT 61.645 55.000 0.00 0.00 34.31 4.75
5447 11334 4.463539 TCTGGCAAAATGACATGCTACAAT 59.536 37.500 0.00 0.00 42.20 2.71
5754 11647 4.517453 GGTCATGCAGGTACAAAGTAACAA 59.483 41.667 0.00 0.00 0.00 2.83
5771 11664 2.189594 TGGCTGTTGAGAAGGTCATG 57.810 50.000 0.00 0.00 34.17 3.07
5800 11693 6.093219 CCTGAATAGTTCAACTGACCATTGAG 59.907 42.308 0.00 0.00 39.58 3.02
5801 11694 5.939883 CCTGAATAGTTCAACTGACCATTGA 59.060 40.000 0.00 0.00 39.58 2.57
5841 11735 8.821894 GTTACTTAGAGCATCCATAGTTTCAAG 58.178 37.037 0.00 0.00 33.66 3.02
6081 12084 1.298157 CGCTTCAGGAACAATGCCGA 61.298 55.000 0.00 0.00 0.00 5.54
6497 12659 6.247229 TGGGCAAATAGAAGCTCATAGTAA 57.753 37.500 0.00 0.00 36.06 2.24
6516 12678 1.207811 CAGGGTTTCAAATGGATGGGC 59.792 52.381 0.00 0.00 0.00 5.36
6731 12975 5.437060 TCTCTTTGTGAAATATAGCCCACC 58.563 41.667 0.00 0.00 0.00 4.61
6749 12993 1.412710 TCGGTGCAACACTCTTCTCTT 59.587 47.619 0.98 0.00 39.98 2.85
6831 13078 5.508657 GGTTAACACTTCTCCACTTACGAGT 60.509 44.000 8.10 0.00 36.25 4.18
6955 13239 0.387622 TTCAGTAACTCCGTTCGGCG 60.388 55.000 0.00 0.00 40.95 6.46
7095 13621 3.552294 GCCAAGATTTCTCTGTACGTAGC 59.448 47.826 0.00 0.00 0.00 3.58
7096 13622 4.113354 GGCCAAGATTTCTCTGTACGTAG 58.887 47.826 0.00 0.00 0.00 3.51
7097 13623 3.118884 GGGCCAAGATTTCTCTGTACGTA 60.119 47.826 4.39 0.00 0.00 3.57
7098 13624 2.354805 GGGCCAAGATTTCTCTGTACGT 60.355 50.000 4.39 0.00 0.00 3.57
7099 13625 2.280628 GGGCCAAGATTTCTCTGTACG 58.719 52.381 4.39 0.00 0.00 3.67
7100 13626 3.350219 TGGGCCAAGATTTCTCTGTAC 57.650 47.619 2.13 0.00 0.00 2.90
7101 13627 4.591321 AATGGGCCAAGATTTCTCTGTA 57.409 40.909 11.89 0.00 0.00 2.74
7102 13628 3.463048 AATGGGCCAAGATTTCTCTGT 57.537 42.857 11.89 0.00 0.00 3.41
7103 13629 3.633986 GGTAATGGGCCAAGATTTCTCTG 59.366 47.826 11.89 0.00 0.00 3.35
7104 13630 3.529319 AGGTAATGGGCCAAGATTTCTCT 59.471 43.478 11.89 0.00 0.00 3.10
7105 13631 3.903467 AGGTAATGGGCCAAGATTTCTC 58.097 45.455 11.89 0.00 0.00 2.87
7106 13632 4.337264 AAGGTAATGGGCCAAGATTTCT 57.663 40.909 11.89 0.59 0.00 2.52
7107 13633 4.383010 CCAAAGGTAATGGGCCAAGATTTC 60.383 45.833 11.89 0.00 34.15 2.17
7108 13634 3.519107 CCAAAGGTAATGGGCCAAGATTT 59.481 43.478 11.89 2.07 34.15 2.17
7109 13635 3.106827 CCAAAGGTAATGGGCCAAGATT 58.893 45.455 11.89 2.52 34.15 2.40
7110 13636 2.750814 CCAAAGGTAATGGGCCAAGAT 58.249 47.619 11.89 2.14 34.15 2.40
7111 13637 1.894978 GCCAAAGGTAATGGGCCAAGA 60.895 52.381 11.89 0.00 40.55 3.02
7112 13638 0.536724 GCCAAAGGTAATGGGCCAAG 59.463 55.000 11.89 0.00 40.55 3.61
7113 13639 1.254284 CGCCAAAGGTAATGGGCCAA 61.254 55.000 11.89 0.00 43.50 4.52
7114 13640 1.680651 CGCCAAAGGTAATGGGCCA 60.681 57.895 9.61 9.61 43.50 5.36
7115 13641 2.423064 CCGCCAAAGGTAATGGGCC 61.423 63.158 0.00 0.00 43.50 5.80
7139 13665 2.871182 TCCTCGTTGGAGATCATTCG 57.129 50.000 0.00 0.00 43.27 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.