Multiple sequence alignment - TraesCS3B01G232400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G232400 chr3B 100.000 2492 0 0 1 2492 354956098 354953607 0.000000e+00 4602.0
1 TraesCS3B01G232400 chr3B 94.751 381 19 1 296 676 354954406 354954027 2.130000e-165 592.0
2 TraesCS3B01G232400 chr3B 94.751 381 19 1 1693 2072 354955803 354955423 2.130000e-165 592.0
3 TraesCS3B01G232400 chr3B 95.638 298 13 0 1 298 354972277 354971980 1.730000e-131 479.0
4 TraesCS3B01G232400 chr3B 94.966 298 15 0 1 298 554597138 554597435 3.750000e-128 468.0
5 TraesCS3B01G232400 chr3B 81.818 264 43 5 2189 2450 193145257 193145517 1.500000e-52 217.0
6 TraesCS3B01G232400 chr1B 85.313 1103 120 24 635 1717 616025798 616024718 0.000000e+00 1101.0
7 TraesCS3B01G232400 chr1B 84.972 1058 116 29 681 1706 95442376 95443422 0.000000e+00 1033.0
8 TraesCS3B01G232400 chr1B 87.500 512 53 9 1121 1630 21840380 21840882 4.620000e-162 580.0
9 TraesCS3B01G232400 chr1B 94.295 298 17 0 1 298 494913923 494914220 8.120000e-125 457.0
10 TraesCS3B01G232400 chr1B 92.617 298 22 0 1 298 326094408 326094111 1.770000e-116 429.0
11 TraesCS3B01G232400 chr1B 92.308 299 23 0 1 299 326086047 326085749 2.290000e-115 425.0
12 TraesCS3B01G232400 chr7B 84.531 1099 122 31 657 1722 730913719 730914802 0.000000e+00 1044.0
13 TraesCS3B01G232400 chr7B 85.463 853 85 27 867 1685 389136341 389137188 0.000000e+00 852.0
14 TraesCS3B01G232400 chr7B 87.885 520 51 10 1114 1630 671196299 671196809 3.550000e-168 601.0
15 TraesCS3B01G232400 chr7B 87.595 524 55 8 1114 1635 23066021 23065506 1.280000e-167 599.0
16 TraesCS3B01G232400 chr7B 95.000 300 15 0 1 300 477705603 477705304 2.900000e-129 472.0
17 TraesCS3B01G232400 chr7B 94.631 298 16 0 1 298 477714544 477714841 1.750000e-126 462.0
18 TraesCS3B01G232400 chr5A 84.481 973 115 28 668 1630 701869494 701870440 0.000000e+00 928.0
19 TraesCS3B01G232400 chr5A 86.949 590 70 6 678 1265 63939461 63938877 0.000000e+00 656.0
20 TraesCS3B01G232400 chr5A 86.387 191 23 3 2275 2462 218320256 218320066 3.250000e-49 206.0
21 TraesCS3B01G232400 chr7A 84.235 850 107 20 757 1603 625488955 625489780 0.000000e+00 802.0
22 TraesCS3B01G232400 chr7A 88.007 567 65 3 719 1284 13545987 13545423 0.000000e+00 667.0
23 TraesCS3B01G232400 chr7A 86.242 298 41 0 1 298 184675506 184675209 8.600000e-85 324.0
24 TraesCS3B01G232400 chr5D 90.706 581 36 9 699 1265 40684428 40683852 0.000000e+00 758.0
25 TraesCS3B01G232400 chr5B 85.950 726 75 15 300 1016 44038186 44038893 0.000000e+00 750.0
26 TraesCS3B01G232400 chr5B 87.458 598 66 7 659 1251 210239089 210239682 0.000000e+00 680.0
27 TraesCS3B01G232400 chr5B 87.091 519 56 9 1114 1630 682094294 682094803 5.980000e-161 577.0
28 TraesCS3B01G232400 chr5B 86.286 525 61 9 1114 1636 682132153 682132668 6.020000e-156 560.0
29 TraesCS3B01G232400 chr5B 87.244 439 40 5 1633 2066 44038125 44038552 1.040000e-133 486.0
30 TraesCS3B01G232400 chr5B 100.000 28 0 0 2031 2058 439964511 439964538 4.000000e-03 52.8
31 TraesCS3B01G232400 chr2D 89.273 578 61 1 681 1258 252170428 252171004 0.000000e+00 723.0
32 TraesCS3B01G232400 chr2D 88.983 590 58 6 678 1265 573454933 573454349 0.000000e+00 723.0
33 TraesCS3B01G232400 chr4A 88.468 581 61 5 680 1258 674928797 674928221 0.000000e+00 697.0
34 TraesCS3B01G232400 chr4A 87.500 608 64 7 1471 2070 699043777 699044380 0.000000e+00 691.0
35 TraesCS3B01G232400 chr4A 87.583 604 61 8 1468 2066 736963470 736964064 0.000000e+00 688.0
36 TraesCS3B01G232400 chr4A 93.617 376 18 3 299 670 736963691 736964064 7.790000e-155 556.0
37 TraesCS3B01G232400 chr4A 91.316 380 28 2 299 674 699044002 699044380 4.750000e-142 514.0
38 TraesCS3B01G232400 chr4A 94.845 194 10 0 1873 2066 736990808 736991001 1.120000e-78 303.0
39 TraesCS3B01G232400 chr4A 94.359 195 10 1 476 670 736990808 736991001 5.210000e-77 298.0
40 TraesCS3B01G232400 chr4A 86.935 199 23 3 2253 2450 411209185 411208989 1.160000e-53 220.0
41 TraesCS3B01G232400 chr6D 87.648 591 64 7 678 1265 18304611 18305195 0.000000e+00 678.0
42 TraesCS3B01G232400 chr6D 80.556 324 50 11 2074 2390 254288262 254287945 1.150000e-58 237.0
43 TraesCS3B01G232400 chr6D 86.957 207 26 1 2245 2450 221440137 221440343 5.360000e-57 231.0
44 TraesCS3B01G232400 chrUn 87.252 604 63 8 1468 2066 335842644 335843238 0.000000e+00 676.0
45 TraesCS3B01G232400 chrUn 93.085 376 20 3 299 670 335842865 335843238 1.690000e-151 545.0
46 TraesCS3B01G232400 chrUn 84.069 408 51 8 1468 1870 382530666 382531064 5.030000e-102 381.0
47 TraesCS3B01G232400 chrUn 94.416 197 11 0 1873 2069 327028651 327028455 1.120000e-78 303.0
48 TraesCS3B01G232400 chrUn 93.939 198 11 1 476 673 327028651 327028455 5.210000e-77 298.0
49 TraesCS3B01G232400 chrUn 92.737 179 8 2 299 473 382530887 382531064 1.140000e-63 254.0
50 TraesCS3B01G232400 chr1D 85.714 301 37 6 1 298 77198516 77198219 1.860000e-81 313.0
51 TraesCS3B01G232400 chr1D 82.488 217 35 3 2235 2450 162349472 162349686 1.180000e-43 187.0
52 TraesCS3B01G232400 chr6B 84.588 279 39 4 2173 2450 367144771 367145046 8.780000e-70 274.0
53 TraesCS3B01G232400 chr2A 81.387 274 45 6 2180 2450 402154168 402153898 4.170000e-53 219.0
54 TraesCS3B01G232400 chr4D 83.621 232 34 3 2236 2466 204948300 204948528 5.400000e-52 215.0
55 TraesCS3B01G232400 chr4D 85.859 198 27 1 2254 2450 288242656 288242459 2.510000e-50 209.0
56 TraesCS3B01G232400 chr2B 83.495 103 7 9 1640 1737 638150455 638150358 1.230000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G232400 chr3B 354953607 354956098 2491 True 1928.666667 4602 96.500667 1 2492 3 chr3B.!!$R2 2491
1 TraesCS3B01G232400 chr1B 616024718 616025798 1080 True 1101.000000 1101 85.313000 635 1717 1 chr1B.!!$R3 1082
2 TraesCS3B01G232400 chr1B 95442376 95443422 1046 False 1033.000000 1033 84.972000 681 1706 1 chr1B.!!$F2 1025
3 TraesCS3B01G232400 chr1B 21840380 21840882 502 False 580.000000 580 87.500000 1121 1630 1 chr1B.!!$F1 509
4 TraesCS3B01G232400 chr7B 730913719 730914802 1083 False 1044.000000 1044 84.531000 657 1722 1 chr7B.!!$F4 1065
5 TraesCS3B01G232400 chr7B 389136341 389137188 847 False 852.000000 852 85.463000 867 1685 1 chr7B.!!$F1 818
6 TraesCS3B01G232400 chr7B 671196299 671196809 510 False 601.000000 601 87.885000 1114 1630 1 chr7B.!!$F3 516
7 TraesCS3B01G232400 chr7B 23065506 23066021 515 True 599.000000 599 87.595000 1114 1635 1 chr7B.!!$R1 521
8 TraesCS3B01G232400 chr5A 701869494 701870440 946 False 928.000000 928 84.481000 668 1630 1 chr5A.!!$F1 962
9 TraesCS3B01G232400 chr5A 63938877 63939461 584 True 656.000000 656 86.949000 678 1265 1 chr5A.!!$R1 587
10 TraesCS3B01G232400 chr7A 625488955 625489780 825 False 802.000000 802 84.235000 757 1603 1 chr7A.!!$F1 846
11 TraesCS3B01G232400 chr7A 13545423 13545987 564 True 667.000000 667 88.007000 719 1284 1 chr7A.!!$R1 565
12 TraesCS3B01G232400 chr5D 40683852 40684428 576 True 758.000000 758 90.706000 699 1265 1 chr5D.!!$R1 566
13 TraesCS3B01G232400 chr5B 210239089 210239682 593 False 680.000000 680 87.458000 659 1251 1 chr5B.!!$F1 592
14 TraesCS3B01G232400 chr5B 44038125 44038893 768 False 618.000000 750 86.597000 300 2066 2 chr5B.!!$F5 1766
15 TraesCS3B01G232400 chr5B 682094294 682094803 509 False 577.000000 577 87.091000 1114 1630 1 chr5B.!!$F3 516
16 TraesCS3B01G232400 chr5B 682132153 682132668 515 False 560.000000 560 86.286000 1114 1636 1 chr5B.!!$F4 522
17 TraesCS3B01G232400 chr2D 252170428 252171004 576 False 723.000000 723 89.273000 681 1258 1 chr2D.!!$F1 577
18 TraesCS3B01G232400 chr2D 573454349 573454933 584 True 723.000000 723 88.983000 678 1265 1 chr2D.!!$R1 587
19 TraesCS3B01G232400 chr4A 674928221 674928797 576 True 697.000000 697 88.468000 680 1258 1 chr4A.!!$R2 578
20 TraesCS3B01G232400 chr4A 736963470 736964064 594 False 622.000000 688 90.600000 299 2066 2 chr4A.!!$F2 1767
21 TraesCS3B01G232400 chr4A 699043777 699044380 603 False 602.500000 691 89.408000 299 2070 2 chr4A.!!$F1 1771
22 TraesCS3B01G232400 chr6D 18304611 18305195 584 False 678.000000 678 87.648000 678 1265 1 chr6D.!!$F1 587
23 TraesCS3B01G232400 chrUn 335842644 335843238 594 False 610.500000 676 90.168500 299 2066 2 chrUn.!!$F1 1767

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 583 0.03213 ACTCTGCGTCAACACACGAT 59.968 50.0 0.0 0.0 42.69 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2415 2517 0.037232 CAAGTCCACCGGAGTTCCTC 60.037 60.0 9.46 0.0 42.79 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 8.916628 AATAGTTTTACCTACCGTTTTAACCA 57.083 30.769 0.00 0.00 0.00 3.67
64 65 6.618287 AGTTTTACCTACCGTTTTAACCAC 57.382 37.500 0.00 0.00 0.00 4.16
65 66 6.356556 AGTTTTACCTACCGTTTTAACCACT 58.643 36.000 0.00 0.00 0.00 4.00
66 67 6.828273 AGTTTTACCTACCGTTTTAACCACTT 59.172 34.615 0.00 0.00 0.00 3.16
67 68 7.990314 AGTTTTACCTACCGTTTTAACCACTTA 59.010 33.333 0.00 0.00 0.00 2.24
68 69 8.616942 GTTTTACCTACCGTTTTAACCACTTAA 58.383 33.333 0.00 0.00 0.00 1.85
69 70 7.961325 TTACCTACCGTTTTAACCACTTAAG 57.039 36.000 0.00 0.00 0.00 1.85
70 71 5.928976 ACCTACCGTTTTAACCACTTAAGT 58.071 37.500 1.12 1.12 0.00 2.24
71 72 5.759763 ACCTACCGTTTTAACCACTTAAGTG 59.240 40.000 25.79 25.79 45.23 3.16
72 73 4.556942 ACCGTTTTAACCACTTAAGTGC 57.443 40.909 27.05 12.42 44.34 4.40
73 74 3.946558 ACCGTTTTAACCACTTAAGTGCA 59.053 39.130 27.05 13.12 44.34 4.57
74 75 4.581409 ACCGTTTTAACCACTTAAGTGCAT 59.419 37.500 27.05 19.68 44.34 3.96
75 76 4.915085 CCGTTTTAACCACTTAAGTGCATG 59.085 41.667 27.05 17.20 44.34 4.06
76 77 5.506649 CCGTTTTAACCACTTAAGTGCATGT 60.507 40.000 27.05 17.80 44.34 3.21
77 78 6.293516 CCGTTTTAACCACTTAAGTGCATGTA 60.294 38.462 27.05 13.78 44.34 2.29
78 79 7.133513 CGTTTTAACCACTTAAGTGCATGTAA 58.866 34.615 27.05 17.86 44.34 2.41
79 80 7.112426 CGTTTTAACCACTTAAGTGCATGTAAC 59.888 37.037 27.05 22.67 44.34 2.50
80 81 6.563222 TTAACCACTTAAGTGCATGTAACC 57.437 37.500 27.05 0.00 44.34 2.85
81 82 4.093472 ACCACTTAAGTGCATGTAACCA 57.907 40.909 27.05 0.00 44.34 3.67
82 83 4.662278 ACCACTTAAGTGCATGTAACCAT 58.338 39.130 27.05 2.24 44.34 3.55
83 84 5.076873 ACCACTTAAGTGCATGTAACCATT 58.923 37.500 27.05 0.00 44.34 3.16
84 85 5.538433 ACCACTTAAGTGCATGTAACCATTT 59.462 36.000 27.05 0.00 44.34 2.32
85 86 6.041523 ACCACTTAAGTGCATGTAACCATTTT 59.958 34.615 27.05 0.00 44.34 1.82
86 87 7.231722 ACCACTTAAGTGCATGTAACCATTTTA 59.768 33.333 27.05 0.00 44.34 1.52
87 88 8.250332 CCACTTAAGTGCATGTAACCATTTTAT 58.750 33.333 27.05 0.00 44.34 1.40
104 105 9.719355 ACCATTTTATAAAAATGTGGTTTCTCC 57.281 29.630 21.30 0.00 39.24 3.71
105 106 8.868916 CCATTTTATAAAAATGTGGTTTCTCCG 58.131 33.333 14.35 2.19 36.24 4.63
106 107 7.876896 TTTTATAAAAATGTGGTTTCTCCGC 57.123 32.000 8.20 0.00 46.12 5.54
107 108 2.812358 AAAAATGTGGTTTCTCCGCC 57.188 45.000 0.00 0.00 45.41 6.13
108 109 1.698506 AAAATGTGGTTTCTCCGCCA 58.301 45.000 0.00 0.00 45.41 5.69
109 110 1.923356 AAATGTGGTTTCTCCGCCAT 58.077 45.000 0.00 0.00 45.41 4.40
110 111 2.799126 AATGTGGTTTCTCCGCCATA 57.201 45.000 0.00 0.00 45.41 2.74
111 112 2.799126 ATGTGGTTTCTCCGCCATAA 57.201 45.000 0.00 0.00 45.41 1.90
112 113 2.799126 TGTGGTTTCTCCGCCATAAT 57.201 45.000 0.00 0.00 45.41 1.28
113 114 3.080300 TGTGGTTTCTCCGCCATAATT 57.920 42.857 0.00 0.00 45.41 1.40
114 115 4.223556 TGTGGTTTCTCCGCCATAATTA 57.776 40.909 0.00 0.00 45.41 1.40
115 116 4.787551 TGTGGTTTCTCCGCCATAATTAT 58.212 39.130 0.00 0.00 45.41 1.28
116 117 4.819630 TGTGGTTTCTCCGCCATAATTATC 59.180 41.667 0.00 0.00 45.41 1.75
117 118 5.063880 GTGGTTTCTCCGCCATAATTATCT 58.936 41.667 0.00 0.00 40.57 1.98
118 119 6.183361 TGTGGTTTCTCCGCCATAATTATCTA 60.183 38.462 0.00 0.00 45.41 1.98
119 120 6.879458 GTGGTTTCTCCGCCATAATTATCTAT 59.121 38.462 0.00 0.00 40.57 1.98
120 121 6.878923 TGGTTTCTCCGCCATAATTATCTATG 59.121 38.462 0.00 0.00 39.52 2.23
121 122 6.183360 GGTTTCTCCGCCATAATTATCTATGC 60.183 42.308 0.00 0.00 0.00 3.14
122 123 5.675684 TCTCCGCCATAATTATCTATGCA 57.324 39.130 0.00 0.00 0.00 3.96
123 124 6.239217 TCTCCGCCATAATTATCTATGCAT 57.761 37.500 3.79 3.79 0.00 3.96
124 125 6.653020 TCTCCGCCATAATTATCTATGCATT 58.347 36.000 3.54 0.00 0.00 3.56
125 126 7.791029 TCTCCGCCATAATTATCTATGCATTA 58.209 34.615 3.54 0.00 0.00 1.90
126 127 8.432013 TCTCCGCCATAATTATCTATGCATTAT 58.568 33.333 3.54 1.65 0.00 1.28
127 128 8.978874 TCCGCCATAATTATCTATGCATTATT 57.021 30.769 3.54 0.62 0.00 1.40
128 129 9.407380 TCCGCCATAATTATCTATGCATTATTT 57.593 29.630 3.54 0.00 0.00 1.40
129 130 9.454585 CCGCCATAATTATCTATGCATTATTTG 57.545 33.333 3.54 0.00 0.00 2.32
130 131 9.454585 CGCCATAATTATCTATGCATTATTTGG 57.545 33.333 3.54 8.85 0.00 3.28
131 132 9.252962 GCCATAATTATCTATGCATTATTTGGC 57.747 33.333 3.54 13.45 30.68 4.52
136 137 8.874744 ATTATCTATGCATTATTTGGCTCACT 57.125 30.769 3.54 0.00 0.00 3.41
137 138 6.814506 ATCTATGCATTATTTGGCTCACTC 57.185 37.500 3.54 0.00 0.00 3.51
138 139 5.065914 TCTATGCATTATTTGGCTCACTCC 58.934 41.667 3.54 0.00 0.00 3.85
139 140 2.016318 TGCATTATTTGGCTCACTCCG 58.984 47.619 0.00 0.00 0.00 4.63
140 141 2.288666 GCATTATTTGGCTCACTCCGA 58.711 47.619 0.00 0.00 0.00 4.55
141 142 2.682856 GCATTATTTGGCTCACTCCGAA 59.317 45.455 0.00 0.00 34.20 4.30
142 143 3.487544 GCATTATTTGGCTCACTCCGAAC 60.488 47.826 0.00 0.00 32.58 3.95
143 144 3.410631 TTATTTGGCTCACTCCGAACA 57.589 42.857 0.00 0.00 32.58 3.18
144 145 2.270352 ATTTGGCTCACTCCGAACAA 57.730 45.000 0.00 0.00 32.58 2.83
145 146 2.270352 TTTGGCTCACTCCGAACAAT 57.730 45.000 0.00 0.00 0.00 2.71
146 147 2.270352 TTGGCTCACTCCGAACAATT 57.730 45.000 0.00 0.00 0.00 2.32
147 148 2.270352 TGGCTCACTCCGAACAATTT 57.730 45.000 0.00 0.00 0.00 1.82
148 149 3.410631 TGGCTCACTCCGAACAATTTA 57.589 42.857 0.00 0.00 0.00 1.40
149 150 3.334691 TGGCTCACTCCGAACAATTTAG 58.665 45.455 0.00 0.00 0.00 1.85
150 151 3.244422 TGGCTCACTCCGAACAATTTAGT 60.244 43.478 0.00 0.00 0.00 2.24
151 152 3.751698 GGCTCACTCCGAACAATTTAGTT 59.248 43.478 0.00 0.00 0.00 2.24
152 153 4.215613 GGCTCACTCCGAACAATTTAGTTT 59.784 41.667 0.00 0.00 0.00 2.66
153 154 5.278315 GGCTCACTCCGAACAATTTAGTTTT 60.278 40.000 0.00 0.00 0.00 2.43
154 155 6.072893 GGCTCACTCCGAACAATTTAGTTTTA 60.073 38.462 0.00 0.00 0.00 1.52
155 156 7.357303 GCTCACTCCGAACAATTTAGTTTTAA 58.643 34.615 0.00 0.00 0.00 1.52
156 157 8.021396 GCTCACTCCGAACAATTTAGTTTTAAT 58.979 33.333 0.00 0.00 0.00 1.40
182 183 8.898983 ATTTGAAAACTTTGATTGTTTGCTTG 57.101 26.923 0.00 0.00 37.64 4.01
183 184 7.664082 TTGAAAACTTTGATTGTTTGCTTGA 57.336 28.000 0.00 0.00 37.64 3.02
184 185 7.846644 TGAAAACTTTGATTGTTTGCTTGAT 57.153 28.000 0.00 0.00 37.64 2.57
185 186 8.266392 TGAAAACTTTGATTGTTTGCTTGATT 57.734 26.923 0.00 0.00 37.64 2.57
186 187 8.728833 TGAAAACTTTGATTGTTTGCTTGATTT 58.271 25.926 0.00 0.00 37.64 2.17
187 188 9.558648 GAAAACTTTGATTGTTTGCTTGATTTT 57.441 25.926 0.00 0.00 37.64 1.82
188 189 8.898983 AAACTTTGATTGTTTGCTTGATTTTG 57.101 26.923 0.00 0.00 36.43 2.44
189 190 7.846644 ACTTTGATTGTTTGCTTGATTTTGA 57.153 28.000 0.00 0.00 0.00 2.69
190 191 8.266392 ACTTTGATTGTTTGCTTGATTTTGAA 57.734 26.923 0.00 0.00 0.00 2.69
191 192 8.728833 ACTTTGATTGTTTGCTTGATTTTGAAA 58.271 25.926 0.00 0.00 0.00 2.69
192 193 9.724839 CTTTGATTGTTTGCTTGATTTTGAAAT 57.275 25.926 0.00 0.00 0.00 2.17
194 195 9.504710 TTGATTGTTTGCTTGATTTTGAAATTG 57.495 25.926 0.00 0.00 0.00 2.32
195 196 8.890718 TGATTGTTTGCTTGATTTTGAAATTGA 58.109 25.926 0.00 0.00 0.00 2.57
196 197 9.719279 GATTGTTTGCTTGATTTTGAAATTGAA 57.281 25.926 0.00 0.00 0.00 2.69
199 200 9.719279 TGTTTGCTTGATTTTGAAATTGAATTC 57.281 25.926 0.00 0.00 0.00 2.17
200 201 8.885108 GTTTGCTTGATTTTGAAATTGAATTCG 58.115 29.630 0.04 0.00 31.80 3.34
201 202 7.943413 TGCTTGATTTTGAAATTGAATTCGA 57.057 28.000 0.00 0.00 31.80 3.71
202 203 8.362860 TGCTTGATTTTGAAATTGAATTCGAA 57.637 26.923 0.00 0.00 32.20 3.71
203 204 8.991026 TGCTTGATTTTGAAATTGAATTCGAAT 58.009 25.926 4.39 4.39 33.74 3.34
204 205 9.469239 GCTTGATTTTGAAATTGAATTCGAATC 57.531 29.630 11.83 5.93 36.29 2.52
205 206 9.666163 CTTGATTTTGAAATTGAATTCGAATCG 57.334 29.630 11.83 0.00 37.32 3.34
206 207 8.172159 TGATTTTGAAATTGAATTCGAATCGG 57.828 30.769 11.83 0.00 37.32 4.18
207 208 7.812191 TGATTTTGAAATTGAATTCGAATCGGT 59.188 29.630 11.83 0.00 37.32 4.69
208 209 7.938563 TTTTGAAATTGAATTCGAATCGGTT 57.061 28.000 11.83 0.00 33.74 4.44
209 210 7.938563 TTTGAAATTGAATTCGAATCGGTTT 57.061 28.000 11.83 10.17 29.69 3.27
210 211 7.561237 TTGAAATTGAATTCGAATCGGTTTC 57.439 32.000 11.83 17.42 31.80 2.78
222 223 2.772568 TCGGTTTCGAACTAACGTGA 57.227 45.000 7.13 0.00 43.03 4.35
223 224 2.653890 TCGGTTTCGAACTAACGTGAG 58.346 47.619 7.13 0.00 43.03 3.51
224 225 1.717645 CGGTTTCGAACTAACGTGAGG 59.282 52.381 4.57 0.00 39.00 3.86
225 226 2.747436 GGTTTCGAACTAACGTGAGGT 58.253 47.619 4.57 0.00 34.70 3.85
226 227 3.126073 GGTTTCGAACTAACGTGAGGTT 58.874 45.455 4.57 2.85 42.75 3.50
227 228 4.298332 GGTTTCGAACTAACGTGAGGTTA 58.702 43.478 4.57 0.00 40.09 2.85
240 241 7.647907 AACGTGAGGTTAGTAACAGTAATTG 57.352 36.000 14.81 1.35 37.00 2.32
241 242 6.985117 ACGTGAGGTTAGTAACAGTAATTGA 58.015 36.000 14.81 0.00 0.00 2.57
242 243 7.088905 ACGTGAGGTTAGTAACAGTAATTGAG 58.911 38.462 14.81 0.33 0.00 3.02
243 244 6.530534 CGTGAGGTTAGTAACAGTAATTGAGG 59.469 42.308 14.81 0.00 0.00 3.86
244 245 7.384477 GTGAGGTTAGTAACAGTAATTGAGGT 58.616 38.462 14.81 0.00 0.00 3.85
245 246 7.331193 GTGAGGTTAGTAACAGTAATTGAGGTG 59.669 40.741 14.81 0.00 0.00 4.00
246 247 7.233962 TGAGGTTAGTAACAGTAATTGAGGTGA 59.766 37.037 14.81 0.00 0.00 4.02
247 248 8.147244 AGGTTAGTAACAGTAATTGAGGTGAT 57.853 34.615 14.81 0.00 0.00 3.06
248 249 8.041323 AGGTTAGTAACAGTAATTGAGGTGATG 58.959 37.037 14.81 0.00 0.00 3.07
249 250 7.280205 GGTTAGTAACAGTAATTGAGGTGATGG 59.720 40.741 14.81 0.00 0.00 3.51
250 251 5.745227 AGTAACAGTAATTGAGGTGATGGG 58.255 41.667 0.00 0.00 0.00 4.00
251 252 4.927267 AACAGTAATTGAGGTGATGGGA 57.073 40.909 0.00 0.00 0.00 4.37
252 253 4.222124 ACAGTAATTGAGGTGATGGGAC 57.778 45.455 0.00 0.00 0.00 4.46
271 272 7.931015 TGGGACATCATTAGTAGAGGTTTAT 57.069 36.000 0.00 0.00 29.12 1.40
272 273 8.331931 TGGGACATCATTAGTAGAGGTTTATT 57.668 34.615 0.00 0.00 29.12 1.40
273 274 8.210946 TGGGACATCATTAGTAGAGGTTTATTG 58.789 37.037 0.00 0.00 29.12 1.90
274 275 8.211629 GGGACATCATTAGTAGAGGTTTATTGT 58.788 37.037 0.00 0.00 29.12 2.71
277 278 9.765795 ACATCATTAGTAGAGGTTTATTGTAGC 57.234 33.333 0.00 0.00 0.00 3.58
278 279 9.988815 CATCATTAGTAGAGGTTTATTGTAGCT 57.011 33.333 0.00 0.00 0.00 3.32
290 291 9.574516 AGGTTTATTGTAGCTTAATTATCCTGG 57.425 33.333 0.00 0.00 0.00 4.45
291 292 8.297426 GGTTTATTGTAGCTTAATTATCCTGGC 58.703 37.037 0.00 0.00 0.00 4.85
292 293 7.667043 TTATTGTAGCTTAATTATCCTGGCG 57.333 36.000 0.00 0.00 0.00 5.69
293 294 4.682778 TGTAGCTTAATTATCCTGGCGT 57.317 40.909 0.00 0.00 0.00 5.68
294 295 5.031066 TGTAGCTTAATTATCCTGGCGTT 57.969 39.130 0.00 0.00 0.00 4.84
295 296 6.164417 TGTAGCTTAATTATCCTGGCGTTA 57.836 37.500 0.00 0.00 0.00 3.18
296 297 5.987347 TGTAGCTTAATTATCCTGGCGTTAC 59.013 40.000 0.00 0.00 0.00 2.50
297 298 5.031066 AGCTTAATTATCCTGGCGTTACA 57.969 39.130 0.00 0.00 0.00 2.41
298 299 5.057149 AGCTTAATTATCCTGGCGTTACAG 58.943 41.667 0.00 0.00 38.21 2.74
299 300 4.319549 GCTTAATTATCCTGGCGTTACAGC 60.320 45.833 0.00 0.00 37.16 4.40
300 301 3.275617 AATTATCCTGGCGTTACAGCA 57.724 42.857 0.00 0.00 39.27 4.41
301 302 2.018542 TTATCCTGGCGTTACAGCAC 57.981 50.000 0.00 0.00 39.27 4.40
302 303 0.899019 TATCCTGGCGTTACAGCACA 59.101 50.000 0.00 0.00 39.27 4.57
303 304 0.673644 ATCCTGGCGTTACAGCACAC 60.674 55.000 0.00 0.00 39.27 3.82
306 307 3.419759 GGCGTTACAGCACACCCG 61.420 66.667 0.00 0.00 39.27 5.28
323 324 2.345991 GGCCACTAACTCCACGCA 59.654 61.111 0.00 0.00 0.00 5.24
346 352 0.389948 AGCACGCACTAACCACTAGC 60.390 55.000 0.00 0.00 0.00 3.42
357 363 5.067936 CACTAACCACTAGCTAGCTACATGT 59.932 44.000 20.67 14.15 0.00 3.21
362 368 4.162072 CACTAGCTAGCTACATGTATGCG 58.838 47.826 20.67 9.97 0.00 4.73
364 370 0.710567 GCTAGCTACATGTATGCGCG 59.289 55.000 7.70 0.00 34.14 6.86
369 375 1.071239 GCTACATGTATGCGCGTCAAG 60.071 52.381 4.79 4.10 0.00 3.02
383 389 3.155344 CGTCAAGCACGTTCAGTTAAG 57.845 47.619 0.00 0.00 44.07 1.85
407 413 1.792367 CACGCACAAACTGATTCGAGA 59.208 47.619 0.00 0.00 0.00 4.04
435 441 2.077821 TACGCAGCTCCACACAACGA 62.078 55.000 0.00 0.00 0.00 3.85
442 448 0.673985 CTCCACACAACGACTCCAGA 59.326 55.000 0.00 0.00 0.00 3.86
450 456 3.614616 CACAACGACTCCAGATAGCTTTC 59.385 47.826 0.00 0.00 0.00 2.62
452 458 2.457598 ACGACTCCAGATAGCTTTCCA 58.542 47.619 0.00 0.00 0.00 3.53
459 465 1.084370 AGATAGCTTTCCACGCACGC 61.084 55.000 0.00 0.00 0.00 5.34
487 493 2.107141 CTGGCGATCCGGTCTTCC 59.893 66.667 0.00 0.00 33.91 3.46
488 494 3.447025 CTGGCGATCCGGTCTTCCC 62.447 68.421 0.00 0.00 33.91 3.97
495 501 2.843912 ATCCGGTCTTCCCCGTACGT 62.844 60.000 15.21 0.00 46.66 3.57
504 510 0.896940 TCCCCGTACGTGAGCTTCTT 60.897 55.000 15.21 0.00 0.00 2.52
529 535 3.283684 CGCAAAACCTGGTCGCCA 61.284 61.111 0.00 0.00 0.00 5.69
572 578 1.192534 GCAACTACTCTGCGTCAACAC 59.807 52.381 0.00 0.00 0.00 3.32
573 579 2.469826 CAACTACTCTGCGTCAACACA 58.530 47.619 0.00 0.00 0.00 3.72
574 580 2.135664 ACTACTCTGCGTCAACACAC 57.864 50.000 0.00 0.00 0.00 3.82
575 581 1.053048 CTACTCTGCGTCAACACACG 58.947 55.000 0.00 0.00 42.95 4.49
576 582 0.664224 TACTCTGCGTCAACACACGA 59.336 50.000 0.00 0.00 42.69 4.35
577 583 0.032130 ACTCTGCGTCAACACACGAT 59.968 50.000 0.00 0.00 42.69 3.73
578 584 0.710567 CTCTGCGTCAACACACGATC 59.289 55.000 0.00 0.00 42.69 3.69
579 585 0.313987 TCTGCGTCAACACACGATCT 59.686 50.000 0.00 0.00 42.69 2.75
590 596 4.162690 ACGATCTCAAGCCCGGCC 62.163 66.667 5.55 0.00 0.00 6.13
594 600 2.819984 GATCTCAAGCCCGGCCACAA 62.820 60.000 5.55 0.00 0.00 3.33
605 611 2.975799 GCCACAAAACCGGCTCGA 60.976 61.111 0.00 0.00 45.29 4.04
606 612 2.548295 GCCACAAAACCGGCTCGAA 61.548 57.895 0.00 0.00 45.29 3.71
610 616 0.320073 ACAAAACCGGCTCGAATCGA 60.320 50.000 4.91 4.91 0.00 3.59
615 621 2.183300 CGGCTCGAATCGAACCCA 59.817 61.111 18.06 0.00 38.70 4.51
617 623 1.017177 CGGCTCGAATCGAACCCAAA 61.017 55.000 18.06 0.00 38.70 3.28
619 625 0.446616 GCTCGAATCGAACCCAAACC 59.553 55.000 6.84 0.00 34.74 3.27
633 639 1.136872 CAAACCAAACACACACGCGG 61.137 55.000 12.47 1.27 0.00 6.46
643 649 1.736282 CACACGCGGACACATGCTA 60.736 57.895 12.47 0.00 0.00 3.49
673 679 0.250553 TGGCGTGGTTTAGTCCCAAG 60.251 55.000 0.00 0.00 34.96 3.61
697 703 2.298661 CCCCCTAAGCCACGACCTT 61.299 63.158 0.00 0.00 0.00 3.50
982 1011 4.662961 CCAGACACTCACCGCGCA 62.663 66.667 8.75 0.00 0.00 6.09
1104 1134 1.153529 AACGTCAACCACACGCTCA 60.154 52.632 0.00 0.00 41.10 4.26
1168 1198 1.673009 CCCATAACACGCACCGGTT 60.673 57.895 2.97 0.00 0.00 4.44
1485 1572 2.721274 CAATTGTTGGAACCGCATCA 57.279 45.000 0.00 0.00 0.00 3.07
1500 1587 2.031245 CGCATCACTCTAGCTACCTCTG 60.031 54.545 0.00 0.00 0.00 3.35
1551 1640 8.389779 AGAAAAACAGTGGACACAAAATTTTT 57.610 26.923 0.00 10.53 31.83 1.94
1557 1647 2.168521 TGGACACAAAATTTTTCGGCCA 59.831 40.909 16.67 16.67 0.00 5.36
1688 1785 4.250431 GTGCACACACACACGGCC 62.250 66.667 13.17 0.00 46.61 6.13
1689 1786 4.785453 TGCACACACACACGGCCA 62.785 61.111 2.24 0.00 0.00 5.36
1692 1789 4.150203 ACACACACACGGCCACGA 62.150 61.111 2.24 0.00 44.60 4.35
1693 1790 3.636043 CACACACACGGCCACGAC 61.636 66.667 2.24 0.00 44.60 4.34
1694 1791 4.150203 ACACACACGGCCACGACA 62.150 61.111 2.24 0.00 44.60 4.35
1717 1814 1.615424 ACCCGGCCACTAACTCCAT 60.615 57.895 2.24 0.00 0.00 3.41
1742 1843 2.100916 CCTAGCACGCACTAACCACTAT 59.899 50.000 0.00 0.00 0.00 2.12
1780 1881 3.155344 CGTCAAGCACGTTCAGTTAAG 57.845 47.619 0.00 0.00 44.07 1.85
1783 1884 2.158871 TCAAGCACGTTCAGTTAAGGGT 60.159 45.455 0.00 0.00 0.00 4.34
1791 1892 0.753867 TCAGTTAAGGGTCACGCACA 59.246 50.000 0.00 0.00 0.00 4.57
1856 1958 3.492980 GATAGCTTTCCGCGCACGC 62.493 63.158 8.75 4.64 45.59 5.34
1882 1984 3.148279 ACCTGGCGATCCGGTCTC 61.148 66.667 0.00 0.00 35.38 3.36
1961 2063 1.293498 CCCGCTGCAACTACTCTGT 59.707 57.895 0.00 0.00 0.00 3.41
1985 2087 1.215382 CACACGATCTCAAGCCCGA 59.785 57.895 0.00 0.00 0.00 5.14
2029 2131 1.857364 GACCTAAACACACACGCGG 59.143 57.895 12.47 1.27 0.00 6.46
2076 2178 2.674754 TTGGTCCCAAGATCGGCC 59.325 61.111 0.00 0.00 0.00 6.13
2077 2179 2.227757 TTGGTCCCAAGATCGGCCA 61.228 57.895 2.24 0.00 0.00 5.36
2078 2180 1.570857 TTGGTCCCAAGATCGGCCAT 61.571 55.000 2.24 0.00 0.00 4.40
2079 2181 1.526917 GGTCCCAAGATCGGCCATG 60.527 63.158 2.24 0.00 0.00 3.66
2080 2182 1.526917 GTCCCAAGATCGGCCATGG 60.527 63.158 7.63 7.63 0.00 3.66
2081 2183 2.908940 CCCAAGATCGGCCATGGC 60.909 66.667 29.47 29.47 41.06 4.40
2106 2208 2.758327 ACGGCGAGGCAGTGGATA 60.758 61.111 16.62 0.00 35.39 2.59
2107 2209 2.279517 CGGCGAGGCAGTGGATAC 60.280 66.667 0.00 0.00 0.00 2.24
2148 2250 4.760047 GACGCGGTGTGGGATGCT 62.760 66.667 12.47 0.00 0.00 3.79
2152 2254 3.434319 CGGTGTGGGATGCTGCAC 61.434 66.667 3.57 0.00 0.00 4.57
2153 2255 2.034687 GGTGTGGGATGCTGCACT 59.965 61.111 3.57 0.00 32.90 4.40
2154 2256 2.338015 GGTGTGGGATGCTGCACTG 61.338 63.158 3.57 0.00 32.90 3.66
2155 2257 2.674033 TGTGGGATGCTGCACTGC 60.674 61.111 3.57 0.00 0.00 4.40
2171 2273 3.864686 GCAGGGCGTGCGTACATG 61.865 66.667 17.04 0.00 43.99 3.21
2177 2279 3.254654 CGTGCGTACATGCGGGAG 61.255 66.667 4.09 0.00 37.81 4.30
2191 2293 4.681978 GGAGCACGCAACGAGGGT 62.682 66.667 0.00 0.00 45.35 4.34
2192 2294 2.260434 GAGCACGCAACGAGGGTA 59.740 61.111 0.00 0.00 42.14 3.69
2193 2295 1.153628 GAGCACGCAACGAGGGTAT 60.154 57.895 0.00 0.00 42.14 2.73
2194 2296 1.146358 GAGCACGCAACGAGGGTATC 61.146 60.000 0.00 0.00 42.14 2.24
2195 2297 2.171725 GCACGCAACGAGGGTATCC 61.172 63.158 0.00 0.00 42.14 2.59
2196 2298 1.216977 CACGCAACGAGGGTATCCA 59.783 57.895 0.00 0.00 42.14 3.41
2197 2299 0.806102 CACGCAACGAGGGTATCCAG 60.806 60.000 0.00 0.00 42.14 3.86
2198 2300 0.968901 ACGCAACGAGGGTATCCAGA 60.969 55.000 0.00 0.00 42.24 3.86
2199 2301 0.249073 CGCAACGAGGGTATCCAGAG 60.249 60.000 0.00 0.00 34.83 3.35
2200 2302 0.530870 GCAACGAGGGTATCCAGAGC 60.531 60.000 0.00 0.00 34.83 4.09
2201 2303 0.249073 CAACGAGGGTATCCAGAGCG 60.249 60.000 0.00 0.00 34.83 5.03
2202 2304 1.392710 AACGAGGGTATCCAGAGCGG 61.393 60.000 0.00 0.00 34.83 5.52
2203 2305 2.565645 CGAGGGTATCCAGAGCGGG 61.566 68.421 0.00 0.00 34.83 6.13
2204 2306 2.122813 AGGGTATCCAGAGCGGGG 60.123 66.667 0.00 0.00 34.83 5.73
2205 2307 3.242291 GGGTATCCAGAGCGGGGG 61.242 72.222 0.00 0.00 34.36 5.40
2220 2322 4.489771 GGGGCGTGCTGGTATGCT 62.490 66.667 3.24 0.00 33.15 3.79
2221 2323 2.504032 GGGCGTGCTGGTATGCTA 59.496 61.111 3.24 0.00 33.15 3.49
2222 2324 1.887707 GGGCGTGCTGGTATGCTAC 60.888 63.158 3.24 0.00 33.15 3.58
2223 2325 2.237751 GGCGTGCTGGTATGCTACG 61.238 63.158 3.24 0.00 38.99 3.51
2224 2326 1.226859 GCGTGCTGGTATGCTACGA 60.227 57.895 12.65 0.00 38.62 3.43
2225 2327 0.597637 GCGTGCTGGTATGCTACGAT 60.598 55.000 12.65 0.00 38.62 3.73
2226 2328 1.335597 GCGTGCTGGTATGCTACGATA 60.336 52.381 12.65 0.00 38.62 2.92
2227 2329 2.585845 CGTGCTGGTATGCTACGATAG 58.414 52.381 0.00 0.00 38.62 2.08
2258 2360 9.350951 AGAAACTACAAATAAAAGTTACAGGCT 57.649 29.630 0.00 0.00 33.24 4.58
2259 2361 9.961265 GAAACTACAAATAAAAGTTACAGGCTT 57.039 29.630 0.00 0.00 33.24 4.35
2260 2362 9.961265 AAACTACAAATAAAAGTTACAGGCTTC 57.039 29.630 0.00 0.00 33.24 3.86
2261 2363 7.803724 ACTACAAATAAAAGTTACAGGCTTCG 58.196 34.615 0.00 0.00 0.00 3.79
2262 2364 5.458015 ACAAATAAAAGTTACAGGCTTCGC 58.542 37.500 0.00 0.00 0.00 4.70
2281 2383 2.649034 GGAGCACCGAGAACACGA 59.351 61.111 0.00 0.00 35.09 4.35
2282 2384 1.733399 GGAGCACCGAGAACACGAC 60.733 63.158 0.00 0.00 35.09 4.34
2283 2385 2.050351 AGCACCGAGAACACGACG 60.050 61.111 0.00 0.00 35.09 5.12
2284 2386 2.050714 GCACCGAGAACACGACGA 60.051 61.111 0.00 0.00 35.09 4.20
2285 2387 1.659335 GCACCGAGAACACGACGAA 60.659 57.895 0.00 0.00 35.09 3.85
2286 2388 1.606350 GCACCGAGAACACGACGAAG 61.606 60.000 0.00 0.00 35.09 3.79
2287 2389 1.002250 CACCGAGAACACGACGAAGG 61.002 60.000 0.00 0.00 35.09 3.46
2288 2390 2.087009 CCGAGAACACGACGAAGGC 61.087 63.158 0.00 0.00 35.09 4.35
2289 2391 1.371267 CGAGAACACGACGAAGGCA 60.371 57.895 0.00 0.00 35.09 4.75
2290 2392 1.606350 CGAGAACACGACGAAGGCAC 61.606 60.000 0.00 0.00 35.09 5.01
2291 2393 1.606350 GAGAACACGACGAAGGCACG 61.606 60.000 0.00 2.85 39.31 5.34
2292 2394 2.654912 GAACACGACGAAGGCACGG 61.655 63.158 0.00 0.00 37.61 4.94
2295 2397 4.719369 ACGACGAAGGCACGGCTC 62.719 66.667 0.00 0.00 39.34 4.70
2296 2398 4.421479 CGACGAAGGCACGGCTCT 62.421 66.667 8.16 0.00 39.34 4.09
2297 2399 2.882876 GACGAAGGCACGGCTCTA 59.117 61.111 8.70 0.00 38.37 2.43
2298 2400 1.437986 GACGAAGGCACGGCTCTAT 59.562 57.895 8.70 0.00 38.37 1.98
2299 2401 0.595310 GACGAAGGCACGGCTCTATC 60.595 60.000 8.70 0.00 38.37 2.08
2300 2402 1.300233 CGAAGGCACGGCTCTATCC 60.300 63.158 0.00 0.00 0.00 2.59
2301 2403 1.823295 GAAGGCACGGCTCTATCCA 59.177 57.895 0.00 0.00 0.00 3.41
2302 2404 0.249657 GAAGGCACGGCTCTATCCAG 60.250 60.000 0.00 0.00 0.00 3.86
2303 2405 0.978146 AAGGCACGGCTCTATCCAGT 60.978 55.000 0.00 0.00 0.00 4.00
2304 2406 1.068250 GGCACGGCTCTATCCAGTC 59.932 63.158 0.00 0.00 0.00 3.51
2305 2407 1.068250 GCACGGCTCTATCCAGTCC 59.932 63.158 0.00 0.00 0.00 3.85
2306 2408 1.395826 GCACGGCTCTATCCAGTCCT 61.396 60.000 0.00 0.00 0.00 3.85
2307 2409 1.982660 CACGGCTCTATCCAGTCCTA 58.017 55.000 0.00 0.00 0.00 2.94
2308 2410 1.883275 CACGGCTCTATCCAGTCCTAG 59.117 57.143 0.00 0.00 0.00 3.02
2309 2411 1.202952 ACGGCTCTATCCAGTCCTAGG 60.203 57.143 0.82 0.82 0.00 3.02
2310 2412 1.888826 CGGCTCTATCCAGTCCTAGGG 60.889 61.905 9.46 0.00 0.00 3.53
2311 2413 1.551329 GGCTCTATCCAGTCCTAGGGG 60.551 61.905 9.46 2.13 0.00 4.79
2312 2414 1.551329 GCTCTATCCAGTCCTAGGGGG 60.551 61.905 9.46 8.77 0.00 5.40
2313 2415 2.074579 CTCTATCCAGTCCTAGGGGGA 58.925 57.143 16.77 16.77 42.77 4.81
2320 2422 2.043652 TCCTAGGGGGAACGGTCG 60.044 66.667 9.46 0.00 41.91 4.79
2321 2423 3.152400 CCTAGGGGGAACGGTCGG 61.152 72.222 0.00 0.00 37.23 4.79
2322 2424 3.846430 CTAGGGGGAACGGTCGGC 61.846 72.222 0.00 0.00 0.00 5.54
2329 2431 4.047059 GAACGGTCGGCGACAGGA 62.047 66.667 35.88 2.84 33.68 3.86
2330 2432 3.562779 GAACGGTCGGCGACAGGAA 62.563 63.158 35.88 2.03 33.68 3.36
2331 2433 3.154584 AACGGTCGGCGACAGGAAA 62.155 57.895 35.88 1.23 33.68 3.13
2332 2434 2.809601 CGGTCGGCGACAGGAAAG 60.810 66.667 37.13 18.48 33.68 2.62
2333 2435 2.654877 GGTCGGCGACAGGAAAGA 59.345 61.111 37.13 0.00 33.68 2.52
2334 2436 1.446272 GGTCGGCGACAGGAAAGAG 60.446 63.158 37.13 0.00 33.68 2.85
2335 2437 2.095252 GTCGGCGACAGGAAAGAGC 61.095 63.158 33.07 2.90 32.09 4.09
2336 2438 3.181967 CGGCGACAGGAAAGAGCG 61.182 66.667 0.00 0.00 0.00 5.03
2337 2439 2.815647 GGCGACAGGAAAGAGCGG 60.816 66.667 0.00 0.00 0.00 5.52
2338 2440 2.815647 GCGACAGGAAAGAGCGGG 60.816 66.667 0.00 0.00 0.00 6.13
2339 2441 2.125512 CGACAGGAAAGAGCGGGG 60.126 66.667 0.00 0.00 0.00 5.73
2340 2442 2.269241 GACAGGAAAGAGCGGGGG 59.731 66.667 0.00 0.00 0.00 5.40
2356 2458 3.668886 GGGGGAGTTGGGTATACCT 57.331 57.895 21.25 1.08 41.11 3.08
2357 2459 2.801282 GGGGGAGTTGGGTATACCTA 57.199 55.000 21.25 13.22 41.11 3.08
2358 2460 2.617658 GGGGGAGTTGGGTATACCTAG 58.382 57.143 21.25 0.00 41.11 3.02
2359 2461 2.090324 GGGGGAGTTGGGTATACCTAGT 60.090 54.545 21.25 12.32 41.11 2.57
2360 2462 3.142787 GGGGGAGTTGGGTATACCTAGTA 59.857 52.174 21.25 0.00 41.11 1.82
2361 2463 4.202869 GGGGGAGTTGGGTATACCTAGTAT 60.203 50.000 21.25 5.36 41.11 2.12
2362 2464 5.016675 GGGGGAGTTGGGTATACCTAGTATA 59.983 48.000 21.25 0.00 41.11 1.47
2363 2465 5.954752 GGGGAGTTGGGTATACCTAGTATAC 59.045 48.000 21.25 10.40 45.75 1.47
2379 2481 9.303116 ACCTAGTATACCTATGACAAGAAGATG 57.697 37.037 0.00 0.00 0.00 2.90
2380 2482 9.303116 CCTAGTATACCTATGACAAGAAGATGT 57.697 37.037 0.00 0.00 35.90 3.06
2382 2484 7.957002 AGTATACCTATGACAAGAAGATGTGG 58.043 38.462 0.00 0.00 32.57 4.17
2383 2485 3.878778 ACCTATGACAAGAAGATGTGGC 58.121 45.455 0.00 0.00 32.57 5.01
2384 2486 3.209410 CCTATGACAAGAAGATGTGGCC 58.791 50.000 0.00 0.00 32.57 5.36
2385 2487 1.742761 ATGACAAGAAGATGTGGCCG 58.257 50.000 0.00 0.00 32.57 6.13
2386 2488 0.321564 TGACAAGAAGATGTGGCCGG 60.322 55.000 0.00 0.00 32.57 6.13
2387 2489 1.002134 ACAAGAAGATGTGGCCGGG 60.002 57.895 2.18 0.00 30.82 5.73
2388 2490 1.750399 CAAGAAGATGTGGCCGGGG 60.750 63.158 2.18 0.00 0.00 5.73
2389 2491 1.923395 AAGAAGATGTGGCCGGGGA 60.923 57.895 2.18 0.00 0.00 4.81
2390 2492 1.281925 AAGAAGATGTGGCCGGGGAT 61.282 55.000 2.18 0.00 0.00 3.85
2391 2493 1.526917 GAAGATGTGGCCGGGGATG 60.527 63.158 2.18 0.00 0.00 3.51
2392 2494 3.721370 AAGATGTGGCCGGGGATGC 62.721 63.158 2.18 0.00 0.00 3.91
2393 2495 4.504596 GATGTGGCCGGGGATGCA 62.505 66.667 2.18 0.00 0.00 3.96
2394 2496 4.511246 ATGTGGCCGGGGATGCAG 62.511 66.667 2.18 0.00 0.00 4.41
2396 2498 3.792736 GTGGCCGGGGATGCAGTA 61.793 66.667 2.18 0.00 0.00 2.74
2397 2499 3.479203 TGGCCGGGGATGCAGTAG 61.479 66.667 2.18 0.00 0.00 2.57
2398 2500 3.161450 GGCCGGGGATGCAGTAGA 61.161 66.667 2.18 0.00 0.00 2.59
2399 2501 2.520536 GGCCGGGGATGCAGTAGAT 61.521 63.158 2.18 0.00 0.00 1.98
2400 2502 1.004440 GCCGGGGATGCAGTAGATC 60.004 63.158 2.18 0.00 0.00 2.75
2401 2503 1.290324 CCGGGGATGCAGTAGATCG 59.710 63.158 0.00 0.00 0.00 3.69
2402 2504 1.179174 CCGGGGATGCAGTAGATCGA 61.179 60.000 0.00 0.00 0.00 3.59
2403 2505 0.039074 CGGGGATGCAGTAGATCGAC 60.039 60.000 0.00 0.00 0.00 4.20
2404 2506 0.039074 GGGGATGCAGTAGATCGACG 60.039 60.000 0.00 0.00 0.00 5.12
2405 2507 0.039074 GGGATGCAGTAGATCGACGG 60.039 60.000 1.85 1.85 0.00 4.79
2406 2508 0.664767 GGATGCAGTAGATCGACGGC 60.665 60.000 20.82 20.82 40.46 5.68
2407 2509 0.999228 GATGCAGTAGATCGACGGCG 60.999 60.000 21.74 2.87 42.63 6.46
2421 2523 2.490685 GGCGAGGAGACGAGGAAC 59.509 66.667 0.00 0.00 35.09 3.62
2433 2535 4.641792 AGGAACTCCGGTGGACTT 57.358 55.556 8.63 0.00 42.08 3.01
2434 2536 2.058675 AGGAACTCCGGTGGACTTG 58.941 57.895 8.63 0.00 42.08 3.16
2435 2537 1.671379 GGAACTCCGGTGGACTTGC 60.671 63.158 8.63 0.00 0.00 4.01
2436 2538 1.371558 GAACTCCGGTGGACTTGCT 59.628 57.895 8.63 0.00 0.00 3.91
2437 2539 0.951040 GAACTCCGGTGGACTTGCTG 60.951 60.000 8.63 0.00 0.00 4.41
2438 2540 1.696097 AACTCCGGTGGACTTGCTGT 61.696 55.000 8.63 0.00 0.00 4.40
2439 2541 1.374758 CTCCGGTGGACTTGCTGTC 60.375 63.158 0.00 2.51 44.63 3.51
2447 2549 3.588277 GACTTGCTGTCCGTGAAGA 57.412 52.632 0.00 0.00 39.69 2.87
2448 2550 1.865865 GACTTGCTGTCCGTGAAGAA 58.134 50.000 0.00 0.00 39.69 2.52
2449 2551 1.795286 GACTTGCTGTCCGTGAAGAAG 59.205 52.381 0.00 0.00 39.69 2.85
2450 2552 1.151668 CTTGCTGTCCGTGAAGAAGG 58.848 55.000 0.00 0.00 0.00 3.46
2451 2553 0.884704 TTGCTGTCCGTGAAGAAGGC 60.885 55.000 0.00 0.00 0.00 4.35
2452 2554 2.383527 GCTGTCCGTGAAGAAGGCG 61.384 63.158 0.00 0.00 0.00 5.52
2453 2555 1.738099 CTGTCCGTGAAGAAGGCGG 60.738 63.158 0.00 0.00 46.12 6.13
2458 2560 3.330766 CGTGAAGAAGGCGGAGTAG 57.669 57.895 0.00 0.00 0.00 2.57
2459 2561 0.526662 CGTGAAGAAGGCGGAGTAGT 59.473 55.000 0.00 0.00 0.00 2.73
2460 2562 1.732732 CGTGAAGAAGGCGGAGTAGTG 60.733 57.143 0.00 0.00 0.00 2.74
2461 2563 0.895530 TGAAGAAGGCGGAGTAGTGG 59.104 55.000 0.00 0.00 0.00 4.00
2462 2564 1.183549 GAAGAAGGCGGAGTAGTGGA 58.816 55.000 0.00 0.00 0.00 4.02
2463 2565 1.549170 GAAGAAGGCGGAGTAGTGGAA 59.451 52.381 0.00 0.00 0.00 3.53
2464 2566 1.187087 AGAAGGCGGAGTAGTGGAAG 58.813 55.000 0.00 0.00 0.00 3.46
2465 2567 1.183549 GAAGGCGGAGTAGTGGAAGA 58.816 55.000 0.00 0.00 0.00 2.87
2466 2568 1.549170 GAAGGCGGAGTAGTGGAAGAA 59.451 52.381 0.00 0.00 0.00 2.52
2467 2569 1.187087 AGGCGGAGTAGTGGAAGAAG 58.813 55.000 0.00 0.00 0.00 2.85
2468 2570 1.183549 GGCGGAGTAGTGGAAGAAGA 58.816 55.000 0.00 0.00 0.00 2.87
2469 2571 1.757699 GGCGGAGTAGTGGAAGAAGAT 59.242 52.381 0.00 0.00 0.00 2.40
2470 2572 2.482142 GGCGGAGTAGTGGAAGAAGATG 60.482 54.545 0.00 0.00 0.00 2.90
2471 2573 2.166664 GCGGAGTAGTGGAAGAAGATGT 59.833 50.000 0.00 0.00 0.00 3.06
2472 2574 3.735514 GCGGAGTAGTGGAAGAAGATGTC 60.736 52.174 0.00 0.00 0.00 3.06
2473 2575 3.487711 CGGAGTAGTGGAAGAAGATGTCG 60.488 52.174 0.00 0.00 0.00 4.35
2474 2576 3.695060 GGAGTAGTGGAAGAAGATGTCGA 59.305 47.826 0.00 0.00 0.00 4.20
2475 2577 4.439016 GGAGTAGTGGAAGAAGATGTCGAC 60.439 50.000 9.11 9.11 0.00 4.20
2476 2578 2.638556 AGTGGAAGAAGATGTCGACG 57.361 50.000 11.62 0.00 0.00 5.12
2477 2579 2.160205 AGTGGAAGAAGATGTCGACGA 58.840 47.619 11.62 0.00 0.00 4.20
2478 2580 2.557056 AGTGGAAGAAGATGTCGACGAA 59.443 45.455 11.62 0.00 0.00 3.85
2479 2581 2.662156 GTGGAAGAAGATGTCGACGAAC 59.338 50.000 11.62 4.75 0.00 3.95
2480 2582 2.557056 TGGAAGAAGATGTCGACGAACT 59.443 45.455 11.62 7.08 0.00 3.01
2481 2583 3.005472 TGGAAGAAGATGTCGACGAACTT 59.995 43.478 11.62 14.99 0.00 2.66
2482 2584 3.365220 GGAAGAAGATGTCGACGAACTTG 59.635 47.826 20.40 0.00 0.00 3.16
2483 2585 2.947852 AGAAGATGTCGACGAACTTGG 58.052 47.619 20.40 0.00 0.00 3.61
2484 2586 1.390463 GAAGATGTCGACGAACTTGGC 59.610 52.381 20.40 8.44 0.00 4.52
2485 2587 0.732880 AGATGTCGACGAACTTGGCG 60.733 55.000 11.62 0.00 0.00 5.69
2486 2588 0.731514 GATGTCGACGAACTTGGCGA 60.732 55.000 11.62 0.00 0.00 5.54
2487 2589 0.108804 ATGTCGACGAACTTGGCGAT 60.109 50.000 11.62 0.00 35.08 4.58
2488 2590 0.731514 TGTCGACGAACTTGGCGATC 60.732 55.000 11.62 0.00 35.08 3.69
2489 2591 1.153901 TCGACGAACTTGGCGATCC 60.154 57.895 0.00 0.00 0.00 3.36
2490 2592 1.153823 CGACGAACTTGGCGATCCT 60.154 57.895 0.00 0.00 0.00 3.24
2491 2593 0.736325 CGACGAACTTGGCGATCCTT 60.736 55.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.783093 GTGGTTAAAACGGTAGGTAAAACTATT 58.217 33.333 0.00 0.00 0.00 1.73
39 40 8.156820 AGTGGTTAAAACGGTAGGTAAAACTAT 58.843 33.333 0.00 0.00 0.00 2.12
41 42 6.356556 AGTGGTTAAAACGGTAGGTAAAACT 58.643 36.000 0.00 0.00 0.00 2.66
42 43 6.618287 AGTGGTTAAAACGGTAGGTAAAAC 57.382 37.500 0.00 0.00 0.00 2.43
43 44 8.738645 TTAAGTGGTTAAAACGGTAGGTAAAA 57.261 30.769 0.00 0.00 0.00 1.52
44 45 7.990314 ACTTAAGTGGTTAAAACGGTAGGTAAA 59.010 33.333 7.48 0.00 0.00 2.01
45 46 7.440856 CACTTAAGTGGTTAAAACGGTAGGTAA 59.559 37.037 25.19 0.00 42.10 2.85
46 47 6.928492 CACTTAAGTGGTTAAAACGGTAGGTA 59.072 38.462 25.19 0.00 42.10 3.08
49 50 5.236911 TGCACTTAAGTGGTTAAAACGGTAG 59.763 40.000 31.42 6.60 45.72 3.18
50 51 5.121811 TGCACTTAAGTGGTTAAAACGGTA 58.878 37.500 31.42 3.68 45.72 4.02
53 54 5.516090 ACATGCACTTAAGTGGTTAAAACG 58.484 37.500 31.42 8.35 45.72 3.60
54 55 7.380333 GGTTACATGCACTTAAGTGGTTAAAAC 59.620 37.037 31.42 20.97 45.72 2.43
55 56 7.068348 TGGTTACATGCACTTAAGTGGTTAAAA 59.932 33.333 31.42 13.15 45.72 1.52
57 58 6.062749 TGGTTACATGCACTTAAGTGGTTAA 58.937 36.000 31.42 15.18 45.72 2.01
58 59 5.622180 TGGTTACATGCACTTAAGTGGTTA 58.378 37.500 31.42 15.46 45.72 2.85
60 61 4.093472 TGGTTACATGCACTTAAGTGGT 57.907 40.909 31.42 23.60 45.72 4.16
78 79 9.719355 GGAGAAACCACATTTTTATAAAATGGT 57.281 29.630 21.30 21.30 43.39 3.55
79 80 8.868916 CGGAGAAACCACATTTTTATAAAATGG 58.131 33.333 20.32 20.32 40.84 3.16
80 81 8.379902 GCGGAGAAACCACATTTTTATAAAATG 58.620 33.333 18.40 18.40 41.91 2.32
81 82 7.547722 GGCGGAGAAACCACATTTTTATAAAAT 59.452 33.333 11.33 0.21 38.90 1.82
82 83 6.869388 GGCGGAGAAACCACATTTTTATAAAA 59.131 34.615 6.54 6.54 38.90 1.52
83 84 6.015350 TGGCGGAGAAACCACATTTTTATAAA 60.015 34.615 0.00 0.00 38.90 1.40
84 85 5.477291 TGGCGGAGAAACCACATTTTTATAA 59.523 36.000 0.00 0.00 38.90 0.98
85 86 5.010933 TGGCGGAGAAACCACATTTTTATA 58.989 37.500 0.00 0.00 38.90 0.98
86 87 3.829601 TGGCGGAGAAACCACATTTTTAT 59.170 39.130 0.00 0.00 38.90 1.40
87 88 3.223435 TGGCGGAGAAACCACATTTTTA 58.777 40.909 0.00 0.00 38.90 1.52
88 89 2.035632 TGGCGGAGAAACCACATTTTT 58.964 42.857 0.00 0.00 38.90 1.94
89 90 1.698506 TGGCGGAGAAACCACATTTT 58.301 45.000 0.00 0.00 38.90 1.82
90 91 1.923356 ATGGCGGAGAAACCACATTT 58.077 45.000 0.00 0.00 39.19 2.32
91 92 2.799126 TATGGCGGAGAAACCACATT 57.201 45.000 0.00 0.00 39.19 2.71
92 93 2.799126 TTATGGCGGAGAAACCACAT 57.201 45.000 0.00 0.00 39.19 3.21
93 94 2.799126 ATTATGGCGGAGAAACCACA 57.201 45.000 0.00 0.00 39.19 4.17
94 95 5.063880 AGATAATTATGGCGGAGAAACCAC 58.936 41.667 1.78 0.00 39.19 4.16
95 96 5.304686 AGATAATTATGGCGGAGAAACCA 57.695 39.130 1.78 0.00 41.06 3.67
96 97 6.183360 GCATAGATAATTATGGCGGAGAAACC 60.183 42.308 1.78 0.00 32.77 3.27
97 98 6.371548 TGCATAGATAATTATGGCGGAGAAAC 59.628 38.462 1.78 0.00 32.77 2.78
98 99 6.472016 TGCATAGATAATTATGGCGGAGAAA 58.528 36.000 1.78 0.00 32.77 2.52
99 100 6.048732 TGCATAGATAATTATGGCGGAGAA 57.951 37.500 1.78 0.00 32.77 2.87
100 101 5.675684 TGCATAGATAATTATGGCGGAGA 57.324 39.130 1.78 0.00 32.77 3.71
101 102 6.932356 AATGCATAGATAATTATGGCGGAG 57.068 37.500 1.78 0.00 32.77 4.63
102 103 8.978874 AATAATGCATAGATAATTATGGCGGA 57.021 30.769 1.78 0.00 32.77 5.54
103 104 9.454585 CAAATAATGCATAGATAATTATGGCGG 57.545 33.333 1.78 0.00 32.77 6.13
104 105 9.454585 CCAAATAATGCATAGATAATTATGGCG 57.545 33.333 1.78 0.00 32.77 5.69
105 106 9.252962 GCCAAATAATGCATAGATAATTATGGC 57.747 33.333 1.78 7.37 35.98 4.40
110 111 9.305555 AGTGAGCCAAATAATGCATAGATAATT 57.694 29.630 0.00 0.00 0.00 1.40
111 112 8.874744 AGTGAGCCAAATAATGCATAGATAAT 57.125 30.769 0.00 0.00 0.00 1.28
112 113 7.391554 GGAGTGAGCCAAATAATGCATAGATAA 59.608 37.037 0.00 0.00 0.00 1.75
113 114 6.881065 GGAGTGAGCCAAATAATGCATAGATA 59.119 38.462 0.00 0.00 0.00 1.98
114 115 5.709164 GGAGTGAGCCAAATAATGCATAGAT 59.291 40.000 0.00 0.00 0.00 1.98
115 116 5.065914 GGAGTGAGCCAAATAATGCATAGA 58.934 41.667 0.00 0.00 0.00 1.98
116 117 4.083643 CGGAGTGAGCCAAATAATGCATAG 60.084 45.833 0.00 0.00 0.00 2.23
117 118 3.814842 CGGAGTGAGCCAAATAATGCATA 59.185 43.478 0.00 0.00 0.00 3.14
118 119 2.620115 CGGAGTGAGCCAAATAATGCAT 59.380 45.455 0.00 0.00 0.00 3.96
119 120 2.016318 CGGAGTGAGCCAAATAATGCA 58.984 47.619 0.00 0.00 0.00 3.96
120 121 2.288666 TCGGAGTGAGCCAAATAATGC 58.711 47.619 0.00 0.00 0.00 3.56
121 122 3.689161 TGTTCGGAGTGAGCCAAATAATG 59.311 43.478 0.00 0.00 0.00 1.90
122 123 3.950397 TGTTCGGAGTGAGCCAAATAAT 58.050 40.909 0.00 0.00 0.00 1.28
123 124 3.410631 TGTTCGGAGTGAGCCAAATAA 57.589 42.857 0.00 0.00 0.00 1.40
124 125 3.410631 TTGTTCGGAGTGAGCCAAATA 57.589 42.857 0.00 0.00 0.00 1.40
125 126 2.270352 TTGTTCGGAGTGAGCCAAAT 57.730 45.000 0.00 0.00 0.00 2.32
126 127 2.270352 ATTGTTCGGAGTGAGCCAAA 57.730 45.000 0.00 0.00 0.00 3.28
127 128 2.270352 AATTGTTCGGAGTGAGCCAA 57.730 45.000 0.00 0.00 0.00 4.52
128 129 2.270352 AAATTGTTCGGAGTGAGCCA 57.730 45.000 0.00 0.00 0.00 4.75
129 130 3.335579 ACTAAATTGTTCGGAGTGAGCC 58.664 45.455 0.00 0.00 0.00 4.70
130 131 5.358298 AAACTAAATTGTTCGGAGTGAGC 57.642 39.130 0.00 0.00 0.00 4.26
156 157 9.985318 CAAGCAAACAATCAAAGTTTTCAAATA 57.015 25.926 0.00 0.00 37.10 1.40
157 158 8.728833 TCAAGCAAACAATCAAAGTTTTCAAAT 58.271 25.926 0.00 0.00 37.10 2.32
158 159 8.092521 TCAAGCAAACAATCAAAGTTTTCAAA 57.907 26.923 0.00 0.00 37.10 2.69
159 160 7.664082 TCAAGCAAACAATCAAAGTTTTCAA 57.336 28.000 0.00 0.00 37.10 2.69
160 161 7.846644 ATCAAGCAAACAATCAAAGTTTTCA 57.153 28.000 0.00 0.00 37.10 2.69
161 162 9.558648 AAAATCAAGCAAACAATCAAAGTTTTC 57.441 25.926 0.00 0.00 37.10 2.29
162 163 9.344309 CAAAATCAAGCAAACAATCAAAGTTTT 57.656 25.926 0.00 0.00 37.10 2.43
163 164 8.728833 TCAAAATCAAGCAAACAATCAAAGTTT 58.271 25.926 0.00 0.00 39.61 2.66
164 165 8.266392 TCAAAATCAAGCAAACAATCAAAGTT 57.734 26.923 0.00 0.00 0.00 2.66
165 166 7.846644 TCAAAATCAAGCAAACAATCAAAGT 57.153 28.000 0.00 0.00 0.00 2.66
166 167 9.724839 ATTTCAAAATCAAGCAAACAATCAAAG 57.275 25.926 0.00 0.00 0.00 2.77
168 169 9.504710 CAATTTCAAAATCAAGCAAACAATCAA 57.495 25.926 0.00 0.00 0.00 2.57
169 170 8.890718 TCAATTTCAAAATCAAGCAAACAATCA 58.109 25.926 0.00 0.00 0.00 2.57
170 171 9.719279 TTCAATTTCAAAATCAAGCAAACAATC 57.281 25.926 0.00 0.00 0.00 2.67
173 174 9.719279 GAATTCAATTTCAAAATCAAGCAAACA 57.281 25.926 0.00 0.00 0.00 2.83
174 175 8.885108 CGAATTCAATTTCAAAATCAAGCAAAC 58.115 29.630 6.22 0.00 0.00 2.93
175 176 8.824781 TCGAATTCAATTTCAAAATCAAGCAAA 58.175 25.926 6.22 0.00 0.00 3.68
176 177 8.362860 TCGAATTCAATTTCAAAATCAAGCAA 57.637 26.923 6.22 0.00 0.00 3.91
177 178 7.943413 TCGAATTCAATTTCAAAATCAAGCA 57.057 28.000 6.22 0.00 0.00 3.91
178 179 9.469239 GATTCGAATTCAATTTCAAAATCAAGC 57.531 29.630 12.81 0.00 32.75 4.01
179 180 9.666163 CGATTCGAATTCAATTTCAAAATCAAG 57.334 29.630 12.81 0.00 32.39 3.02
180 181 8.646356 CCGATTCGAATTCAATTTCAAAATCAA 58.354 29.630 12.81 0.00 32.39 2.57
181 182 7.812191 ACCGATTCGAATTCAATTTCAAAATCA 59.188 29.630 12.81 0.00 32.39 2.57
182 183 8.173321 ACCGATTCGAATTCAATTTCAAAATC 57.827 30.769 12.81 0.00 31.02 2.17
183 184 8.532977 AACCGATTCGAATTCAATTTCAAAAT 57.467 26.923 12.81 0.00 0.00 1.82
184 185 7.938563 AACCGATTCGAATTCAATTTCAAAA 57.061 28.000 12.81 0.00 0.00 2.44
185 186 7.938563 AAACCGATTCGAATTCAATTTCAAA 57.061 28.000 12.81 0.00 0.00 2.69
186 187 7.561237 GAAACCGATTCGAATTCAATTTCAA 57.439 32.000 12.81 0.00 0.00 2.69
200 201 3.670055 TCACGTTAGTTCGAAACCGATTC 59.330 43.478 0.00 0.00 35.82 2.52
201 202 3.641648 TCACGTTAGTTCGAAACCGATT 58.358 40.909 0.00 0.00 35.82 3.34
202 203 3.240069 CTCACGTTAGTTCGAAACCGAT 58.760 45.455 0.00 0.00 35.82 4.18
203 204 2.605338 CCTCACGTTAGTTCGAAACCGA 60.605 50.000 0.00 0.00 34.70 4.69
204 205 1.717645 CCTCACGTTAGTTCGAAACCG 59.282 52.381 0.00 2.39 34.70 4.44
205 206 2.747436 ACCTCACGTTAGTTCGAAACC 58.253 47.619 0.00 0.00 34.70 3.27
206 207 5.491934 CTAACCTCACGTTAGTTCGAAAC 57.508 43.478 0.00 0.00 46.10 2.78
215 216 8.575589 TCAATTACTGTTACTAACCTCACGTTA 58.424 33.333 0.00 0.00 35.79 3.18
216 217 7.436118 TCAATTACTGTTACTAACCTCACGTT 58.564 34.615 0.00 0.00 38.57 3.99
217 218 6.985117 TCAATTACTGTTACTAACCTCACGT 58.015 36.000 0.00 0.00 0.00 4.49
218 219 6.530534 CCTCAATTACTGTTACTAACCTCACG 59.469 42.308 0.00 0.00 0.00 4.35
219 220 7.331193 CACCTCAATTACTGTTACTAACCTCAC 59.669 40.741 0.00 0.00 0.00 3.51
220 221 7.233962 TCACCTCAATTACTGTTACTAACCTCA 59.766 37.037 0.00 0.00 0.00 3.86
221 222 7.609056 TCACCTCAATTACTGTTACTAACCTC 58.391 38.462 0.00 0.00 0.00 3.85
222 223 7.549147 TCACCTCAATTACTGTTACTAACCT 57.451 36.000 0.00 0.00 0.00 3.50
223 224 7.280205 CCATCACCTCAATTACTGTTACTAACC 59.720 40.741 0.00 0.00 0.00 2.85
224 225 7.280205 CCCATCACCTCAATTACTGTTACTAAC 59.720 40.741 0.00 0.00 0.00 2.34
225 226 7.181305 TCCCATCACCTCAATTACTGTTACTAA 59.819 37.037 0.00 0.00 0.00 2.24
226 227 6.670464 TCCCATCACCTCAATTACTGTTACTA 59.330 38.462 0.00 0.00 0.00 1.82
227 228 5.487488 TCCCATCACCTCAATTACTGTTACT 59.513 40.000 0.00 0.00 0.00 2.24
228 229 5.585047 GTCCCATCACCTCAATTACTGTTAC 59.415 44.000 0.00 0.00 0.00 2.50
229 230 5.249622 TGTCCCATCACCTCAATTACTGTTA 59.750 40.000 0.00 0.00 0.00 2.41
230 231 4.042809 TGTCCCATCACCTCAATTACTGTT 59.957 41.667 0.00 0.00 0.00 3.16
231 232 3.587061 TGTCCCATCACCTCAATTACTGT 59.413 43.478 0.00 0.00 0.00 3.55
232 233 4.220693 TGTCCCATCACCTCAATTACTG 57.779 45.455 0.00 0.00 0.00 2.74
233 234 4.474651 TGATGTCCCATCACCTCAATTACT 59.525 41.667 2.88 0.00 0.00 2.24
234 235 4.780815 TGATGTCCCATCACCTCAATTAC 58.219 43.478 2.88 0.00 0.00 1.89
235 236 5.651612 ATGATGTCCCATCACCTCAATTA 57.348 39.130 8.95 0.00 0.00 1.40
236 237 4.531357 ATGATGTCCCATCACCTCAATT 57.469 40.909 8.95 0.00 0.00 2.32
237 238 4.531357 AATGATGTCCCATCACCTCAAT 57.469 40.909 8.95 0.00 0.00 2.57
238 239 4.474651 ACTAATGATGTCCCATCACCTCAA 59.525 41.667 8.95 0.00 0.00 3.02
239 240 4.040047 ACTAATGATGTCCCATCACCTCA 58.960 43.478 8.95 0.00 0.00 3.86
240 241 4.696479 ACTAATGATGTCCCATCACCTC 57.304 45.455 8.95 0.00 0.00 3.85
241 242 5.467738 TCTACTAATGATGTCCCATCACCT 58.532 41.667 8.95 3.16 0.00 4.00
242 243 5.279708 CCTCTACTAATGATGTCCCATCACC 60.280 48.000 8.95 0.00 0.00 4.02
243 244 5.305644 ACCTCTACTAATGATGTCCCATCAC 59.694 44.000 8.95 0.00 0.00 3.06
244 245 5.467738 ACCTCTACTAATGATGTCCCATCA 58.532 41.667 9.17 9.17 0.00 3.07
245 246 6.426646 AACCTCTACTAATGATGTCCCATC 57.573 41.667 0.00 0.00 0.00 3.51
246 247 6.831664 AAACCTCTACTAATGATGTCCCAT 57.168 37.500 0.00 0.00 0.00 4.00
247 248 7.931015 ATAAACCTCTACTAATGATGTCCCA 57.069 36.000 0.00 0.00 0.00 4.37
248 249 8.211629 ACAATAAACCTCTACTAATGATGTCCC 58.788 37.037 0.00 0.00 0.00 4.46
251 252 9.765795 GCTACAATAAACCTCTACTAATGATGT 57.234 33.333 0.00 0.00 0.00 3.06
252 253 9.988815 AGCTACAATAAACCTCTACTAATGATG 57.011 33.333 0.00 0.00 0.00 3.07
264 265 9.574516 CCAGGATAATTAAGCTACAATAAACCT 57.425 33.333 0.00 0.00 0.00 3.50
265 266 8.297426 GCCAGGATAATTAAGCTACAATAAACC 58.703 37.037 0.00 0.00 0.00 3.27
266 267 8.015658 CGCCAGGATAATTAAGCTACAATAAAC 58.984 37.037 0.00 0.00 0.00 2.01
267 268 7.717875 ACGCCAGGATAATTAAGCTACAATAAA 59.282 33.333 0.00 0.00 0.00 1.40
268 269 7.221450 ACGCCAGGATAATTAAGCTACAATAA 58.779 34.615 0.00 0.00 0.00 1.40
269 270 6.765403 ACGCCAGGATAATTAAGCTACAATA 58.235 36.000 0.00 0.00 0.00 1.90
270 271 5.621193 ACGCCAGGATAATTAAGCTACAAT 58.379 37.500 0.00 0.00 0.00 2.71
271 272 5.031066 ACGCCAGGATAATTAAGCTACAA 57.969 39.130 0.00 0.00 0.00 2.41
272 273 4.682778 ACGCCAGGATAATTAAGCTACA 57.317 40.909 0.00 0.00 0.00 2.74
273 274 5.987347 TGTAACGCCAGGATAATTAAGCTAC 59.013 40.000 0.00 0.00 0.00 3.58
274 275 6.164417 TGTAACGCCAGGATAATTAAGCTA 57.836 37.500 0.00 0.00 0.00 3.32
275 276 5.031066 TGTAACGCCAGGATAATTAAGCT 57.969 39.130 0.00 0.00 0.00 3.74
276 277 4.319549 GCTGTAACGCCAGGATAATTAAGC 60.320 45.833 0.00 0.00 32.92 3.09
277 278 4.814234 TGCTGTAACGCCAGGATAATTAAG 59.186 41.667 0.00 0.00 32.92 1.85
278 279 4.573201 GTGCTGTAACGCCAGGATAATTAA 59.427 41.667 0.00 0.00 35.16 1.40
279 280 4.124238 GTGCTGTAACGCCAGGATAATTA 58.876 43.478 0.00 0.00 35.16 1.40
280 281 2.943033 GTGCTGTAACGCCAGGATAATT 59.057 45.455 0.00 0.00 35.16 1.40
281 282 2.093181 TGTGCTGTAACGCCAGGATAAT 60.093 45.455 0.00 0.00 35.16 1.28
282 283 1.276705 TGTGCTGTAACGCCAGGATAA 59.723 47.619 0.00 0.00 35.16 1.75
283 284 0.899019 TGTGCTGTAACGCCAGGATA 59.101 50.000 0.00 0.00 35.16 2.59
284 285 0.673644 GTGTGCTGTAACGCCAGGAT 60.674 55.000 0.00 0.00 35.16 3.24
285 286 1.301401 GTGTGCTGTAACGCCAGGA 60.301 57.895 0.00 0.00 32.92 3.86
286 287 3.253955 GTGTGCTGTAACGCCAGG 58.746 61.111 0.33 0.00 32.92 4.45
290 291 3.419759 CCGGGTGTGCTGTAACGC 61.420 66.667 0.00 0.00 0.00 4.84
291 292 3.419759 GCCGGGTGTGCTGTAACG 61.420 66.667 2.18 0.00 0.00 3.18
292 293 3.053896 GGCCGGGTGTGCTGTAAC 61.054 66.667 2.18 0.00 0.00 2.50
293 294 3.561241 TGGCCGGGTGTGCTGTAA 61.561 61.111 2.18 0.00 0.00 2.41
294 295 4.323477 GTGGCCGGGTGTGCTGTA 62.323 66.667 2.18 0.00 0.00 2.74
296 297 3.545124 TTAGTGGCCGGGTGTGCTG 62.545 63.158 2.18 0.00 0.00 4.41
297 298 3.246112 TTAGTGGCCGGGTGTGCT 61.246 61.111 2.18 0.00 0.00 4.40
298 299 3.053896 GTTAGTGGCCGGGTGTGC 61.054 66.667 2.18 0.00 0.00 4.57
299 300 1.375523 GAGTTAGTGGCCGGGTGTG 60.376 63.158 2.18 0.00 0.00 3.82
300 301 2.590114 GGAGTTAGTGGCCGGGTGT 61.590 63.158 2.18 0.00 0.00 4.16
301 302 2.267961 GGAGTTAGTGGCCGGGTG 59.732 66.667 2.18 0.00 0.00 4.61
302 303 2.203877 TGGAGTTAGTGGCCGGGT 60.204 61.111 2.18 0.00 0.00 5.28
303 304 2.267961 GTGGAGTTAGTGGCCGGG 59.732 66.667 2.18 0.00 0.00 5.73
306 307 2.033194 GTGCGTGGAGTTAGTGGCC 61.033 63.158 0.00 0.00 0.00 5.36
323 324 0.037605 GTGGTTAGTGCGTGCTAGGT 60.038 55.000 0.00 0.00 0.00 3.08
346 352 1.979469 GACGCGCATACATGTAGCTAG 59.021 52.381 11.91 12.30 33.63 3.42
364 370 2.223377 CCCTTAACTGAACGTGCTTGAC 59.777 50.000 0.00 0.00 0.00 3.18
369 375 0.887387 TGGCCCTTAACTGAACGTGC 60.887 55.000 0.00 0.00 0.00 5.34
383 389 1.805428 AATCAGTTTGTGCGTGGCCC 61.805 55.000 0.00 0.00 0.00 5.80
435 441 1.134670 GCGTGGAAAGCTATCTGGAGT 60.135 52.381 0.00 0.00 38.67 3.85
442 448 1.375396 TGCGTGCGTGGAAAGCTAT 60.375 52.632 0.00 0.00 43.59 2.97
487 493 1.352156 GCAAGAAGCTCACGTACGGG 61.352 60.000 21.06 17.09 41.15 5.28
488 494 2.070861 GCAAGAAGCTCACGTACGG 58.929 57.895 21.06 8.79 41.15 4.02
504 510 1.600636 CAGGTTTTGCGGAGGAGCA 60.601 57.895 0.00 0.00 46.54 4.26
509 515 2.966309 GCGACCAGGTTTTGCGGAG 61.966 63.158 0.00 0.00 0.00 4.63
572 578 2.892425 GCCGGGCTTGAGATCGTG 60.892 66.667 12.87 0.00 0.00 4.35
573 579 4.162690 GGCCGGGCTTGAGATCGT 62.163 66.667 22.87 0.00 0.00 3.73
574 580 4.161295 TGGCCGGGCTTGAGATCG 62.161 66.667 29.87 0.00 0.00 3.69
575 581 2.514824 GTGGCCGGGCTTGAGATC 60.515 66.667 29.87 6.91 0.00 2.75
576 582 2.424842 TTTGTGGCCGGGCTTGAGAT 62.425 55.000 29.87 0.00 0.00 2.75
577 583 2.632602 TTTTGTGGCCGGGCTTGAGA 62.633 55.000 29.87 4.99 0.00 3.27
578 584 2.199652 TTTTGTGGCCGGGCTTGAG 61.200 57.895 29.87 0.00 0.00 3.02
579 585 2.123683 TTTTGTGGCCGGGCTTGA 60.124 55.556 29.87 11.56 0.00 3.02
590 596 0.179225 CGATTCGAGCCGGTTTTGTG 60.179 55.000 1.90 0.00 0.00 3.33
594 600 1.017701 GGTTCGATTCGAGCCGGTTT 61.018 55.000 23.32 0.00 45.95 3.27
605 611 2.761208 TGTGTTTGGTTTGGGTTCGATT 59.239 40.909 0.00 0.00 0.00 3.34
606 612 2.100087 GTGTGTTTGGTTTGGGTTCGAT 59.900 45.455 0.00 0.00 0.00 3.59
610 616 1.067495 CGTGTGTGTTTGGTTTGGGTT 60.067 47.619 0.00 0.00 0.00 4.11
615 621 1.137825 CCGCGTGTGTGTTTGGTTT 59.862 52.632 4.92 0.00 0.00 3.27
617 623 2.125065 TCCGCGTGTGTGTTTGGT 60.125 55.556 4.92 0.00 0.00 3.67
619 625 1.297304 GTGTCCGCGTGTGTGTTTG 60.297 57.895 4.92 0.00 0.00 2.93
633 639 1.726853 GGTGGTGACTAGCATGTGTC 58.273 55.000 0.00 1.79 36.58 3.67
673 679 0.106894 CGTGGCTTAGGGGGAGAATC 59.893 60.000 0.00 0.00 0.00 2.52
958 980 0.179045 GGTGAGTGTCTGGTGCAGTT 60.179 55.000 0.00 0.00 32.61 3.16
961 983 2.421314 CGGTGAGTGTCTGGTGCA 59.579 61.111 0.00 0.00 0.00 4.57
1483 1570 2.507886 AGAGCAGAGGTAGCTAGAGTGA 59.492 50.000 0.00 0.00 43.58 3.41
1485 1572 2.507886 TGAGAGCAGAGGTAGCTAGAGT 59.492 50.000 0.00 0.00 43.58 3.24
1500 1587 0.318762 ACCTCCGTTTGAGTGAGAGC 59.681 55.000 0.00 0.00 39.65 4.09
1693 1790 3.545124 TTAGTGGCCGGGTGTGCTG 62.545 63.158 2.18 0.00 0.00 4.41
1694 1791 3.246112 TTAGTGGCCGGGTGTGCT 61.246 61.111 2.18 0.00 0.00 4.40
1742 1843 0.940991 CGCGCATGCATGTAGCTAGA 60.941 55.000 31.27 0.00 45.94 2.43
1780 1881 0.951558 AATCAGTTTGTGCGTGACCC 59.048 50.000 0.00 0.00 0.00 4.46
1783 1884 1.792367 CTCGAATCAGTTTGTGCGTGA 59.208 47.619 0.00 0.00 0.00 4.35
1815 1917 2.281070 CCGTTGTGTGGAGCTGCT 60.281 61.111 6.82 0.00 0.00 4.24
1861 1963 3.147595 CCGGATCGCCAGGTGAGA 61.148 66.667 9.08 0.00 0.00 3.27
1882 1984 1.885163 AAGAAGCTCACGTACGGGGG 61.885 60.000 19.08 16.95 0.00 5.40
1885 1987 2.070861 GCAAGAAGCTCACGTACGG 58.929 57.895 21.06 8.79 41.15 4.02
1910 2012 0.107831 TGCTAGCGACCAGGTTTTGT 59.892 50.000 10.77 0.00 0.00 2.83
1961 2063 2.135139 GCTTGAGATCGTGTGTTGACA 58.865 47.619 0.00 0.00 0.00 3.58
1985 2087 0.953960 GATTCGAGCCGGTTTGTGGT 60.954 55.000 1.90 0.00 0.00 4.16
2029 2131 2.247790 GTGGTGACCAGCATGTGTC 58.752 57.895 3.58 0.00 41.20 3.67
2061 2163 1.526917 CATGGCCGATCTTGGGACC 60.527 63.158 0.00 0.00 0.00 4.46
2066 2168 2.203056 TCGCCATGGCCGATCTTG 60.203 61.111 30.79 14.90 37.98 3.02
2070 2172 2.514592 CTTGTCGCCATGGCCGAT 60.515 61.111 30.79 0.00 37.98 4.18
2073 2175 4.120331 GTGCTTGTCGCCATGGCC 62.120 66.667 30.79 18.20 38.05 5.36
2074 2176 4.465512 CGTGCTTGTCGCCATGGC 62.466 66.667 27.67 27.67 38.05 4.40
2075 2177 3.803082 CCGTGCTTGTCGCCATGG 61.803 66.667 7.63 7.63 38.05 3.66
2076 2178 4.465512 GCCGTGCTTGTCGCCATG 62.466 66.667 0.00 0.00 38.05 3.66
2088 2190 3.076258 TATCCACTGCCTCGCCGTG 62.076 63.158 1.66 1.66 42.01 4.94
2089 2191 2.758327 TATCCACTGCCTCGCCGT 60.758 61.111 0.00 0.00 0.00 5.68
2090 2192 2.279517 GTATCCACTGCCTCGCCG 60.280 66.667 0.00 0.00 0.00 6.46
2091 2193 1.227380 CTGTATCCACTGCCTCGCC 60.227 63.158 0.00 0.00 0.00 5.54
2092 2194 1.884926 GCTGTATCCACTGCCTCGC 60.885 63.158 0.00 0.00 42.16 5.03
2093 2195 0.529337 CTGCTGTATCCACTGCCTCG 60.529 60.000 4.51 0.00 46.05 4.63
2094 2196 0.813210 GCTGCTGTATCCACTGCCTC 60.813 60.000 4.51 0.00 46.05 4.70
2095 2197 1.222936 GCTGCTGTATCCACTGCCT 59.777 57.895 4.51 0.00 46.05 4.75
2096 2198 2.176273 CGCTGCTGTATCCACTGCC 61.176 63.158 0.00 0.00 46.05 4.85
2097 2199 2.817423 GCGCTGCTGTATCCACTGC 61.817 63.158 0.00 0.29 46.60 4.40
2098 2200 1.153489 AGCGCTGCTGTATCCACTG 60.153 57.895 10.39 0.00 37.57 3.66
2099 2201 3.303189 AGCGCTGCTGTATCCACT 58.697 55.556 10.39 0.00 37.57 4.00
2131 2233 4.760047 AGCATCCCACACCGCGTC 62.760 66.667 4.92 0.00 0.00 5.19
2135 2237 3.434319 GTGCAGCATCCCACACCG 61.434 66.667 0.00 0.00 32.37 4.94
2136 2238 2.034687 AGTGCAGCATCCCACACC 59.965 61.111 0.00 0.00 34.48 4.16
2137 2239 2.986306 GCAGTGCAGCATCCCACAC 61.986 63.158 11.09 0.00 34.48 3.82
2138 2240 2.674033 GCAGTGCAGCATCCCACA 60.674 61.111 11.09 0.00 34.48 4.17
2139 2241 2.674033 TGCAGTGCAGCATCCCAC 60.674 61.111 15.37 0.00 40.11 4.61
2154 2256 3.864686 CATGTACGCACGCCCTGC 61.865 66.667 0.00 0.00 43.21 4.85
2155 2257 3.864686 GCATGTACGCACGCCCTG 61.865 66.667 0.00 0.00 0.00 4.45
2160 2262 3.254654 CTCCCGCATGTACGCACG 61.255 66.667 0.00 0.00 0.00 5.34
2161 2263 3.564027 GCTCCCGCATGTACGCAC 61.564 66.667 0.00 0.00 35.78 5.34
2162 2264 4.075854 TGCTCCCGCATGTACGCA 62.076 61.111 0.00 0.00 42.25 5.24
2174 2276 2.573609 ATACCCTCGTTGCGTGCTCC 62.574 60.000 0.00 0.00 0.00 4.70
2175 2277 1.146358 GATACCCTCGTTGCGTGCTC 61.146 60.000 0.00 0.00 0.00 4.26
2176 2278 1.153628 GATACCCTCGTTGCGTGCT 60.154 57.895 0.00 0.00 0.00 4.40
2177 2279 2.171725 GGATACCCTCGTTGCGTGC 61.172 63.158 0.00 0.00 0.00 5.34
2178 2280 0.806102 CTGGATACCCTCGTTGCGTG 60.806 60.000 0.00 0.00 0.00 5.34
2179 2281 0.968901 TCTGGATACCCTCGTTGCGT 60.969 55.000 0.00 0.00 0.00 5.24
2180 2282 0.249073 CTCTGGATACCCTCGTTGCG 60.249 60.000 0.00 0.00 0.00 4.85
2181 2283 0.530870 GCTCTGGATACCCTCGTTGC 60.531 60.000 0.00 0.00 0.00 4.17
2182 2284 0.249073 CGCTCTGGATACCCTCGTTG 60.249 60.000 0.00 0.00 0.00 4.10
2183 2285 1.392710 CCGCTCTGGATACCCTCGTT 61.393 60.000 0.00 0.00 42.00 3.85
2184 2286 1.828660 CCGCTCTGGATACCCTCGT 60.829 63.158 0.00 0.00 42.00 4.18
2185 2287 2.565645 CCCGCTCTGGATACCCTCG 61.566 68.421 0.00 0.00 42.00 4.63
2186 2288 2.210711 CCCCGCTCTGGATACCCTC 61.211 68.421 0.00 0.00 42.00 4.30
2187 2289 2.122813 CCCCGCTCTGGATACCCT 60.123 66.667 0.00 0.00 42.00 4.34
2188 2290 3.242291 CCCCCGCTCTGGATACCC 61.242 72.222 0.00 0.00 42.00 3.69
2203 2305 3.101796 TAGCATACCAGCACGCCCC 62.102 63.158 0.00 0.00 36.85 5.80
2204 2306 1.887707 GTAGCATACCAGCACGCCC 60.888 63.158 0.00 0.00 34.89 6.13
2205 2307 2.237751 CGTAGCATACCAGCACGCC 61.238 63.158 0.00 0.00 38.71 5.68
2206 2308 0.597637 ATCGTAGCATACCAGCACGC 60.598 55.000 0.00 0.00 38.71 5.34
2207 2309 2.585845 CTATCGTAGCATACCAGCACG 58.414 52.381 0.00 0.00 38.71 5.34
2232 2334 9.350951 AGCCTGTAACTTTTATTTGTAGTTTCT 57.649 29.630 0.00 0.00 0.00 2.52
2233 2335 9.961265 AAGCCTGTAACTTTTATTTGTAGTTTC 57.039 29.630 0.00 0.00 0.00 2.78
2234 2336 9.961265 GAAGCCTGTAACTTTTATTTGTAGTTT 57.039 29.630 0.00 0.00 0.00 2.66
2235 2337 8.287503 CGAAGCCTGTAACTTTTATTTGTAGTT 58.712 33.333 0.00 0.00 0.00 2.24
2236 2338 7.803724 CGAAGCCTGTAACTTTTATTTGTAGT 58.196 34.615 0.00 0.00 0.00 2.73
2264 2366 1.733399 GTCGTGTTCTCGGTGCTCC 60.733 63.158 0.00 0.00 0.00 4.70
2265 2367 2.081212 CGTCGTGTTCTCGGTGCTC 61.081 63.158 0.00 0.00 0.00 4.26
2266 2368 2.050351 CGTCGTGTTCTCGGTGCT 60.050 61.111 0.00 0.00 0.00 4.40
2267 2369 1.606350 CTTCGTCGTGTTCTCGGTGC 61.606 60.000 0.00 0.00 0.00 5.01
2268 2370 1.002250 CCTTCGTCGTGTTCTCGGTG 61.002 60.000 0.00 0.00 0.00 4.94
2269 2371 1.285023 CCTTCGTCGTGTTCTCGGT 59.715 57.895 0.00 0.00 0.00 4.69
2270 2372 2.087009 GCCTTCGTCGTGTTCTCGG 61.087 63.158 0.00 0.00 0.00 4.63
2271 2373 1.371267 TGCCTTCGTCGTGTTCTCG 60.371 57.895 0.00 0.00 0.00 4.04
2272 2374 1.606350 CGTGCCTTCGTCGTGTTCTC 61.606 60.000 0.00 0.00 0.00 2.87
2273 2375 1.660575 CGTGCCTTCGTCGTGTTCT 60.661 57.895 0.00 0.00 0.00 3.01
2274 2376 2.654912 CCGTGCCTTCGTCGTGTTC 61.655 63.158 0.00 0.00 0.00 3.18
2275 2377 2.660552 CCGTGCCTTCGTCGTGTT 60.661 61.111 0.00 0.00 0.00 3.32
2278 2380 4.719369 GAGCCGTGCCTTCGTCGT 62.719 66.667 0.00 0.00 0.00 4.34
2279 2381 2.337749 ATAGAGCCGTGCCTTCGTCG 62.338 60.000 0.00 0.00 0.00 5.12
2280 2382 0.595310 GATAGAGCCGTGCCTTCGTC 60.595 60.000 0.00 0.00 0.00 4.20
2281 2383 1.437986 GATAGAGCCGTGCCTTCGT 59.562 57.895 0.00 0.00 0.00 3.85
2282 2384 1.300233 GGATAGAGCCGTGCCTTCG 60.300 63.158 0.00 0.00 0.00 3.79
2283 2385 0.249657 CTGGATAGAGCCGTGCCTTC 60.250 60.000 0.00 0.00 0.00 3.46
2284 2386 0.978146 ACTGGATAGAGCCGTGCCTT 60.978 55.000 0.00 0.00 0.00 4.35
2285 2387 1.381872 ACTGGATAGAGCCGTGCCT 60.382 57.895 0.00 0.00 0.00 4.75
2286 2388 1.068250 GACTGGATAGAGCCGTGCC 59.932 63.158 0.00 0.00 0.00 5.01
2287 2389 1.068250 GGACTGGATAGAGCCGTGC 59.932 63.158 0.00 0.00 0.00 5.34
2288 2390 1.883275 CTAGGACTGGATAGAGCCGTG 59.117 57.143 0.00 0.00 0.00 4.94
2289 2391 1.202952 CCTAGGACTGGATAGAGCCGT 60.203 57.143 1.05 0.00 0.00 5.68
2290 2392 1.540267 CCTAGGACTGGATAGAGCCG 58.460 60.000 1.05 0.00 0.00 5.52
2291 2393 1.551329 CCCCTAGGACTGGATAGAGCC 60.551 61.905 11.48 0.00 33.47 4.70
2292 2394 1.551329 CCCCCTAGGACTGGATAGAGC 60.551 61.905 11.48 0.00 38.24 4.09
2293 2395 2.074579 TCCCCCTAGGACTGGATAGAG 58.925 57.143 11.48 0.00 40.93 2.43
2294 2396 2.240467 TCCCCCTAGGACTGGATAGA 57.760 55.000 11.48 0.00 40.93 1.98
2303 2405 2.043652 CGACCGTTCCCCCTAGGA 60.044 66.667 11.48 0.00 45.68 2.94
2304 2406 3.152400 CCGACCGTTCCCCCTAGG 61.152 72.222 0.06 0.06 0.00 3.02
2305 2407 3.846430 GCCGACCGTTCCCCCTAG 61.846 72.222 0.00 0.00 0.00 3.02
2312 2414 3.562779 TTCCTGTCGCCGACCGTTC 62.563 63.158 15.60 0.00 38.35 3.95
2313 2415 3.154584 TTTCCTGTCGCCGACCGTT 62.155 57.895 15.60 0.00 38.35 4.44
2314 2416 3.569049 CTTTCCTGTCGCCGACCGT 62.569 63.158 15.60 0.00 38.35 4.83
2315 2417 2.809601 CTTTCCTGTCGCCGACCG 60.810 66.667 15.60 8.38 38.61 4.79
2316 2418 1.446272 CTCTTTCCTGTCGCCGACC 60.446 63.158 15.60 0.00 0.00 4.79
2317 2419 2.095252 GCTCTTTCCTGTCGCCGAC 61.095 63.158 10.96 10.96 0.00 4.79
2318 2420 2.261671 GCTCTTTCCTGTCGCCGA 59.738 61.111 0.00 0.00 0.00 5.54
2319 2421 3.181967 CGCTCTTTCCTGTCGCCG 61.182 66.667 0.00 0.00 0.00 6.46
2320 2422 2.815647 CCGCTCTTTCCTGTCGCC 60.816 66.667 0.00 0.00 0.00 5.54
2321 2423 2.815647 CCCGCTCTTTCCTGTCGC 60.816 66.667 0.00 0.00 0.00 5.19
2322 2424 2.125512 CCCCGCTCTTTCCTGTCG 60.126 66.667 0.00 0.00 0.00 4.35
2323 2425 2.269241 CCCCCGCTCTTTCCTGTC 59.731 66.667 0.00 0.00 0.00 3.51
2338 2440 2.090324 ACTAGGTATACCCAACTCCCCC 60.090 54.545 18.65 0.00 36.42 5.40
2339 2441 3.341318 ACTAGGTATACCCAACTCCCC 57.659 52.381 18.65 0.00 36.42 4.81
2353 2455 9.303116 CATCTTCTTGTCATAGGTATACTAGGT 57.697 37.037 2.25 0.00 35.09 3.08
2354 2456 9.303116 ACATCTTCTTGTCATAGGTATACTAGG 57.697 37.037 2.25 0.00 34.56 3.02
2356 2458 9.078990 CCACATCTTCTTGTCATAGGTATACTA 57.921 37.037 2.25 0.00 35.80 1.82
2357 2459 7.472100 GCCACATCTTCTTGTCATAGGTATACT 60.472 40.741 2.25 0.00 0.00 2.12
2358 2460 6.647067 GCCACATCTTCTTGTCATAGGTATAC 59.353 42.308 0.00 0.00 0.00 1.47
2359 2461 6.239600 GGCCACATCTTCTTGTCATAGGTATA 60.240 42.308 0.00 0.00 0.00 1.47
2360 2462 5.455326 GGCCACATCTTCTTGTCATAGGTAT 60.455 44.000 0.00 0.00 0.00 2.73
2361 2463 4.141711 GGCCACATCTTCTTGTCATAGGTA 60.142 45.833 0.00 0.00 0.00 3.08
2362 2464 3.370953 GGCCACATCTTCTTGTCATAGGT 60.371 47.826 0.00 0.00 0.00 3.08
2363 2465 3.209410 GGCCACATCTTCTTGTCATAGG 58.791 50.000 0.00 0.00 0.00 2.57
2364 2466 2.868583 CGGCCACATCTTCTTGTCATAG 59.131 50.000 2.24 0.00 0.00 2.23
2365 2467 2.419990 CCGGCCACATCTTCTTGTCATA 60.420 50.000 2.24 0.00 0.00 2.15
2366 2468 1.679944 CCGGCCACATCTTCTTGTCAT 60.680 52.381 2.24 0.00 0.00 3.06
2367 2469 0.321564 CCGGCCACATCTTCTTGTCA 60.322 55.000 2.24 0.00 0.00 3.58
2368 2470 1.026718 CCCGGCCACATCTTCTTGTC 61.027 60.000 2.24 0.00 0.00 3.18
2369 2471 1.002134 CCCGGCCACATCTTCTTGT 60.002 57.895 2.24 0.00 0.00 3.16
2370 2472 1.750399 CCCCGGCCACATCTTCTTG 60.750 63.158 2.24 0.00 0.00 3.02
2371 2473 1.281925 ATCCCCGGCCACATCTTCTT 61.282 55.000 2.24 0.00 0.00 2.52
2372 2474 1.694169 ATCCCCGGCCACATCTTCT 60.694 57.895 2.24 0.00 0.00 2.85
2373 2475 1.526917 CATCCCCGGCCACATCTTC 60.527 63.158 2.24 0.00 0.00 2.87
2374 2476 2.597340 CATCCCCGGCCACATCTT 59.403 61.111 2.24 0.00 0.00 2.40
2375 2477 4.195334 GCATCCCCGGCCACATCT 62.195 66.667 2.24 0.00 0.00 2.90
2376 2478 4.504596 TGCATCCCCGGCCACATC 62.505 66.667 2.24 0.00 0.00 3.06
2377 2479 4.511246 CTGCATCCCCGGCCACAT 62.511 66.667 2.24 0.00 0.00 3.21
2379 2481 3.757248 CTACTGCATCCCCGGCCAC 62.757 68.421 2.24 0.00 0.00 5.01
2380 2482 3.479203 CTACTGCATCCCCGGCCA 61.479 66.667 2.24 0.00 0.00 5.36
2381 2483 2.456287 GATCTACTGCATCCCCGGCC 62.456 65.000 0.00 0.00 0.00 6.13
2382 2484 1.004440 GATCTACTGCATCCCCGGC 60.004 63.158 0.00 0.00 0.00 6.13
2383 2485 1.179174 TCGATCTACTGCATCCCCGG 61.179 60.000 0.00 0.00 0.00 5.73
2384 2486 0.039074 GTCGATCTACTGCATCCCCG 60.039 60.000 0.00 0.00 0.00 5.73
2385 2487 0.039074 CGTCGATCTACTGCATCCCC 60.039 60.000 0.00 0.00 0.00 4.81
2386 2488 0.039074 CCGTCGATCTACTGCATCCC 60.039 60.000 0.00 0.00 0.00 3.85
2387 2489 0.664767 GCCGTCGATCTACTGCATCC 60.665 60.000 8.60 0.00 30.78 3.51
2388 2490 0.999228 CGCCGTCGATCTACTGCATC 60.999 60.000 12.96 0.00 38.10 3.91
2389 2491 1.008424 CGCCGTCGATCTACTGCAT 60.008 57.895 12.96 0.00 38.10 3.96
2390 2492 2.048312 CTCGCCGTCGATCTACTGCA 62.048 60.000 12.96 0.00 44.56 4.41
2391 2493 1.369448 CTCGCCGTCGATCTACTGC 60.369 63.158 4.01 4.01 44.56 4.40
2392 2494 1.158484 TCCTCGCCGTCGATCTACTG 61.158 60.000 0.00 0.00 44.56 2.74
2393 2495 0.881159 CTCCTCGCCGTCGATCTACT 60.881 60.000 0.00 0.00 44.56 2.57
2394 2496 0.879400 TCTCCTCGCCGTCGATCTAC 60.879 60.000 0.00 0.00 44.56 2.59
2395 2497 0.879400 GTCTCCTCGCCGTCGATCTA 60.879 60.000 0.00 0.00 44.56 1.98
2396 2498 2.181521 GTCTCCTCGCCGTCGATCT 61.182 63.158 0.00 0.00 44.56 2.75
2397 2499 2.328639 GTCTCCTCGCCGTCGATC 59.671 66.667 0.00 0.00 44.56 3.69
2398 2500 3.574445 CGTCTCCTCGCCGTCGAT 61.574 66.667 0.00 0.00 44.56 3.59
2399 2501 4.747529 TCGTCTCCTCGCCGTCGA 62.748 66.667 0.00 0.00 43.28 4.20
2400 2502 4.225340 CTCGTCTCCTCGCCGTCG 62.225 72.222 0.00 0.00 0.00 5.12
2401 2503 3.878519 CCTCGTCTCCTCGCCGTC 61.879 72.222 0.00 0.00 0.00 4.79
2402 2504 3.914579 TTCCTCGTCTCCTCGCCGT 62.915 63.158 0.00 0.00 0.00 5.68
2403 2505 3.132139 TTCCTCGTCTCCTCGCCG 61.132 66.667 0.00 0.00 0.00 6.46
2404 2506 1.995646 GAGTTCCTCGTCTCCTCGCC 61.996 65.000 0.00 0.00 0.00 5.54
2405 2507 1.430228 GAGTTCCTCGTCTCCTCGC 59.570 63.158 0.00 0.00 0.00 5.03
2406 2508 1.707239 CGGAGTTCCTCGTCTCCTCG 61.707 65.000 9.11 0.00 45.57 4.63
2407 2509 1.378124 CCGGAGTTCCTCGTCTCCTC 61.378 65.000 0.00 0.00 45.57 3.71
2408 2510 1.378778 CCGGAGTTCCTCGTCTCCT 60.379 63.158 0.00 0.00 45.57 3.69
2409 2511 1.678300 ACCGGAGTTCCTCGTCTCC 60.678 63.158 9.46 0.00 44.65 3.71
2410 2512 1.507174 CACCGGAGTTCCTCGTCTC 59.493 63.158 9.46 0.00 0.00 3.36
2411 2513 1.977544 CCACCGGAGTTCCTCGTCT 60.978 63.158 9.46 0.00 0.00 4.18
2412 2514 1.975407 TCCACCGGAGTTCCTCGTC 60.975 63.158 9.46 0.00 0.00 4.20
2413 2515 2.116772 TCCACCGGAGTTCCTCGT 59.883 61.111 9.46 0.00 0.00 4.18
2414 2516 1.533469 AAGTCCACCGGAGTTCCTCG 61.533 60.000 9.46 0.00 41.00 4.63
2415 2517 0.037232 CAAGTCCACCGGAGTTCCTC 60.037 60.000 9.46 0.00 42.79 3.71
2416 2518 2.058675 CAAGTCCACCGGAGTTCCT 58.941 57.895 9.46 0.00 42.79 3.36
2417 2519 1.671379 GCAAGTCCACCGGAGTTCC 60.671 63.158 9.46 0.00 42.79 3.62
2418 2520 0.951040 CAGCAAGTCCACCGGAGTTC 60.951 60.000 9.46 0.00 42.79 3.01
2419 2521 1.071471 CAGCAAGTCCACCGGAGTT 59.929 57.895 9.46 0.00 45.22 3.01
2420 2522 2.100879 GACAGCAAGTCCACCGGAGT 62.101 60.000 9.46 0.00 41.56 3.85
2421 2523 1.374758 GACAGCAAGTCCACCGGAG 60.375 63.158 9.46 0.00 41.56 4.63
2422 2524 2.741092 GACAGCAAGTCCACCGGA 59.259 61.111 9.46 0.00 41.56 5.14
2429 2531 1.795286 CTTCTTCACGGACAGCAAGTC 59.205 52.381 1.04 1.04 46.83 3.01
2430 2532 1.541233 CCTTCTTCACGGACAGCAAGT 60.541 52.381 0.00 0.00 0.00 3.16
2431 2533 1.151668 CCTTCTTCACGGACAGCAAG 58.848 55.000 0.00 0.00 0.00 4.01
2432 2534 0.884704 GCCTTCTTCACGGACAGCAA 60.885 55.000 0.00 0.00 0.00 3.91
2433 2535 1.301716 GCCTTCTTCACGGACAGCA 60.302 57.895 0.00 0.00 0.00 4.41
2434 2536 2.383527 CGCCTTCTTCACGGACAGC 61.384 63.158 0.00 0.00 0.00 4.40
2435 2537 3.862124 CGCCTTCTTCACGGACAG 58.138 61.111 0.00 0.00 0.00 3.51
2440 2542 0.526662 ACTACTCCGCCTTCTTCACG 59.473 55.000 0.00 0.00 0.00 4.35
2441 2543 1.404315 CCACTACTCCGCCTTCTTCAC 60.404 57.143 0.00 0.00 0.00 3.18
2442 2544 0.895530 CCACTACTCCGCCTTCTTCA 59.104 55.000 0.00 0.00 0.00 3.02
2443 2545 1.183549 TCCACTACTCCGCCTTCTTC 58.816 55.000 0.00 0.00 0.00 2.87
2444 2546 1.550976 CTTCCACTACTCCGCCTTCTT 59.449 52.381 0.00 0.00 0.00 2.52
2445 2547 1.187087 CTTCCACTACTCCGCCTTCT 58.813 55.000 0.00 0.00 0.00 2.85
2446 2548 1.183549 TCTTCCACTACTCCGCCTTC 58.816 55.000 0.00 0.00 0.00 3.46
2447 2549 1.550976 CTTCTTCCACTACTCCGCCTT 59.449 52.381 0.00 0.00 0.00 4.35
2448 2550 1.187087 CTTCTTCCACTACTCCGCCT 58.813 55.000 0.00 0.00 0.00 5.52
2449 2551 1.183549 TCTTCTTCCACTACTCCGCC 58.816 55.000 0.00 0.00 0.00 6.13
2450 2552 2.166664 ACATCTTCTTCCACTACTCCGC 59.833 50.000 0.00 0.00 0.00 5.54
2451 2553 3.487711 CGACATCTTCTTCCACTACTCCG 60.488 52.174 0.00 0.00 0.00 4.63
2452 2554 3.695060 TCGACATCTTCTTCCACTACTCC 59.305 47.826 0.00 0.00 0.00 3.85
2453 2555 4.664188 GTCGACATCTTCTTCCACTACTC 58.336 47.826 11.55 0.00 0.00 2.59
2454 2556 3.127203 CGTCGACATCTTCTTCCACTACT 59.873 47.826 17.16 0.00 0.00 2.57
2455 2557 3.126514 TCGTCGACATCTTCTTCCACTAC 59.873 47.826 17.16 0.00 0.00 2.73
2456 2558 3.340928 TCGTCGACATCTTCTTCCACTA 58.659 45.455 17.16 0.00 0.00 2.74
2457 2559 2.160205 TCGTCGACATCTTCTTCCACT 58.840 47.619 17.16 0.00 0.00 4.00
2458 2560 2.631418 TCGTCGACATCTTCTTCCAC 57.369 50.000 17.16 0.00 0.00 4.02
2459 2561 2.557056 AGTTCGTCGACATCTTCTTCCA 59.443 45.455 17.16 0.00 0.00 3.53
2460 2562 3.219052 AGTTCGTCGACATCTTCTTCC 57.781 47.619 17.16 0.00 0.00 3.46
2461 2563 3.365220 CCAAGTTCGTCGACATCTTCTTC 59.635 47.826 17.16 0.00 0.00 2.87
2462 2564 3.318017 CCAAGTTCGTCGACATCTTCTT 58.682 45.455 17.16 9.12 0.00 2.52
2463 2565 2.927014 GCCAAGTTCGTCGACATCTTCT 60.927 50.000 17.16 3.33 0.00 2.85
2464 2566 1.390463 GCCAAGTTCGTCGACATCTTC 59.610 52.381 17.16 0.96 0.00 2.87
2465 2567 1.429463 GCCAAGTTCGTCGACATCTT 58.571 50.000 17.16 12.84 0.00 2.40
2466 2568 0.732880 CGCCAAGTTCGTCGACATCT 60.733 55.000 17.16 7.31 0.00 2.90
2467 2569 0.731514 TCGCCAAGTTCGTCGACATC 60.732 55.000 17.16 4.98 0.00 3.06
2468 2570 0.108804 ATCGCCAAGTTCGTCGACAT 60.109 50.000 17.16 0.00 33.59 3.06
2469 2571 0.731514 GATCGCCAAGTTCGTCGACA 60.732 55.000 17.16 0.00 33.59 4.35
2470 2572 1.411493 GGATCGCCAAGTTCGTCGAC 61.411 60.000 5.18 5.18 33.59 4.20
2471 2573 1.153901 GGATCGCCAAGTTCGTCGA 60.154 57.895 0.00 0.00 35.34 4.20
2472 2574 0.736325 AAGGATCGCCAAGTTCGTCG 60.736 55.000 0.00 0.00 36.29 5.12
2473 2575 3.139029 AAGGATCGCCAAGTTCGTC 57.861 52.632 0.00 0.00 36.29 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.