Multiple sequence alignment - TraesCS3B01G232300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G232300 chr3B 100.000 5488 0 0 1 5488 354947989 354942502 0.000000e+00 10135.0
1 TraesCS3B01G232300 chr3B 95.484 155 7 0 5313 5467 108739300 108739454 1.180000e-61 248.0
2 TraesCS3B01G232300 chr3B 84.388 237 33 3 1877 2109 820497123 820497359 4.280000e-56 230.0
3 TraesCS3B01G232300 chr3D 96.700 4818 125 12 308 5098 225523239 225528049 0.000000e+00 7986.0
4 TraesCS3B01G232300 chr3D 95.146 309 13 2 1 307 225522901 225523209 2.300000e-133 486.0
5 TraesCS3B01G232300 chr3A 96.249 4345 112 14 697 5008 323103774 323099448 0.000000e+00 7073.0
6 TraesCS3B01G232300 chr3A 96.970 396 12 0 308 703 323104357 323103962 0.000000e+00 665.0
7 TraesCS3B01G232300 chr3A 95.755 212 4 2 97 307 323104595 323104388 2.450000e-88 337.0
8 TraesCS3B01G232300 chr3A 82.292 192 23 7 5284 5464 57564677 57564868 7.360000e-34 156.0
9 TraesCS3B01G232300 chr3A 97.297 74 2 0 1 74 323104662 323104589 5.770000e-25 126.0
10 TraesCS3B01G232300 chr7D 92.800 250 16 2 1880 2128 486463533 486463781 1.450000e-95 361.0
11 TraesCS3B01G232300 chr7D 95.541 157 5 1 5313 5467 312352705 312352861 3.280000e-62 250.0
12 TraesCS3B01G232300 chr6B 88.259 247 26 2 1879 2125 656031912 656031669 5.380000e-75 292.0
13 TraesCS3B01G232300 chr6B 85.590 229 26 4 1887 2109 33233132 33233359 3.310000e-57 233.0
14 TraesCS3B01G232300 chr6B 84.264 197 19 6 5282 5467 188574522 188574327 1.210000e-41 182.0
15 TraesCS3B01G232300 chr2A 87.352 253 25 2 1880 2129 73540767 73541015 3.240000e-72 283.0
16 TraesCS3B01G232300 chr2A 88.571 140 11 5 5158 5295 779508849 779508713 1.220000e-36 165.0
17 TraesCS3B01G232300 chr2D 92.778 180 8 2 5290 5467 649072900 649072724 7.050000e-64 255.0
18 TraesCS3B01G232300 chr7B 86.250 240 24 2 1886 2124 165309829 165309598 9.130000e-63 252.0
19 TraesCS3B01G232300 chr7B 89.796 49 5 0 5163 5211 565956451 565956499 4.590000e-06 63.9
20 TraesCS3B01G232300 chr2B 95.484 155 7 0 5313 5467 511301816 511301970 1.180000e-61 248.0
21 TraesCS3B01G232300 chr1A 93.865 163 8 1 5307 5467 172798439 172798601 1.530000e-60 244.0
22 TraesCS3B01G232300 chr1A 93.865 163 8 1 5307 5467 234829983 234830145 1.530000e-60 244.0
23 TraesCS3B01G232300 chr7A 90.426 188 12 3 5287 5468 441979789 441979976 5.490000e-60 243.0
24 TraesCS3B01G232300 chr7A 84.146 246 33 5 1881 2123 721092555 721092313 3.310000e-57 233.0
25 TraesCS3B01G232300 chr4B 93.789 161 10 0 5307 5467 397855695 397855855 5.490000e-60 243.0
26 TraesCS3B01G232300 chr4B 100.000 31 0 0 5283 5313 400359955 400359985 2.140000e-04 58.4
27 TraesCS3B01G232300 chr4D 90.556 180 12 2 5290 5467 302345927 302345751 3.310000e-57 233.0
28 TraesCS3B01G232300 chr4D 88.205 195 12 2 5285 5468 384949703 384949897 7.160000e-54 222.0
29 TraesCS3B01G232300 chr1D 90.566 159 12 3 5158 5313 380771311 380771153 2.000000e-49 207.0
30 TraesCS3B01G232300 chr6D 80.928 194 26 7 5285 5467 407826104 407825911 5.730000e-30 143.0
31 TraesCS3B01G232300 chr5A 85.294 136 18 2 5161 5295 509040493 509040359 7.410000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G232300 chr3B 354942502 354947989 5487 True 10135.00 10135 100.00000 1 5488 1 chr3B.!!$R1 5487
1 TraesCS3B01G232300 chr3D 225522901 225528049 5148 False 4236.00 7986 95.92300 1 5098 2 chr3D.!!$F1 5097
2 TraesCS3B01G232300 chr3A 323099448 323104662 5214 True 2050.25 7073 96.56775 1 5008 4 chr3A.!!$R1 5007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 263 0.662619 TCTGCTGTTTTCGTTGCCTG 59.337 50.000 0.00 0.00 0.00 4.85 F
1335 1566 1.665916 CAGACTGACGGCACACAGG 60.666 63.158 0.00 0.00 36.88 4.00 F
1336 1567 2.134287 AGACTGACGGCACACAGGT 61.134 57.895 0.00 0.00 36.88 4.00 F
1788 2019 2.241176 GGAAATGGGTCCATGGTGTCTA 59.759 50.000 12.58 0.98 37.65 2.59 F
2835 3084 1.069022 CCGACAAATGTGCTTGACAGG 60.069 52.381 0.00 0.00 38.23 4.00 F
3794 4043 2.099756 GCTTCAAATGCAGGTCCCATAC 59.900 50.000 0.00 0.00 0.00 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1658 1889 2.027653 TGATTGTACAGGCGGATTCACA 60.028 45.455 0.00 0.00 0.00 3.58 R
2805 3054 0.374758 CATTTGTCGGTGCCTGATCG 59.625 55.000 0.00 0.00 0.00 3.69 R
2817 3066 1.336240 GGCCTGTCAAGCACATTTGTC 60.336 52.381 0.00 0.00 33.23 3.18 R
3119 3368 3.737559 TTGCATAGGGATTGTCCACTT 57.262 42.857 0.00 0.00 38.64 3.16 R
4325 4574 1.820519 GCCTCCAATCTGACAATTGCA 59.179 47.619 5.05 3.92 35.68 4.08 R
5443 5706 0.109153 TGTGGTGTCATGCAGAGCTT 59.891 50.000 0.00 0.00 0.00 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
231 233 3.357166 TTTTGGCGATTAACTTGCGTT 57.643 38.095 0.00 0.00 34.78 4.84
261 263 0.662619 TCTGCTGTTTTCGTTGCCTG 59.337 50.000 0.00 0.00 0.00 4.85
295 298 4.142988 GCCGACACAAACTTCGATTTGATA 60.143 41.667 16.35 0.00 41.28 2.15
330 363 5.163854 GCAACAAAGTCTACATCGTTATGCT 60.164 40.000 0.00 0.00 36.50 3.79
342 375 5.236263 ACATCGTTATGCTCGCATCAAATTA 59.764 36.000 7.79 0.00 37.82 1.40
393 426 3.129852 TCAAAATTAGGCATGTTCGCG 57.870 42.857 0.00 0.00 0.00 5.87
432 465 2.278245 AGGTGTGAGAATGGGGATTGA 58.722 47.619 0.00 0.00 0.00 2.57
497 530 3.532542 GCAGGAAGATGGGTAACTACAC 58.467 50.000 0.00 0.00 0.00 2.90
536 569 8.684386 TGAATTTGTTATGTGTGAAGGACTTA 57.316 30.769 0.00 0.00 0.00 2.24
548 581 9.739276 TGTGTGAAGGACTTAATTAGATTTGAT 57.261 29.630 0.00 0.00 0.00 2.57
584 617 5.485708 ACCAACTTAGGATAAGCTCTGACTT 59.514 40.000 0.00 0.00 0.00 3.01
651 684 4.716943 GCTGAGAGTTTCTGCACATAAAC 58.283 43.478 7.55 4.06 46.58 2.01
730 957 7.424803 TCATAACAATTGCCTTTGATATTCCG 58.575 34.615 5.05 0.00 0.00 4.30
731 958 4.045636 ACAATTGCCTTTGATATTCCGC 57.954 40.909 5.05 0.00 0.00 5.54
785 1012 8.440059 TCTTCTTGCAATACATACTTGTTTACG 58.560 33.333 0.00 0.00 37.28 3.18
826 1053 9.442047 CTATCCAGAAAGATTTTGTACTCAACT 57.558 33.333 0.00 0.00 32.93 3.16
1059 1289 5.472137 TGTTCCAACTGCTGTAAATTCCTAC 59.528 40.000 0.00 0.00 0.00 3.18
1247 1477 9.457436 AGATGTTTATTTTCCGGTTAGTGTAAT 57.543 29.630 0.00 0.00 0.00 1.89
1268 1498 8.736244 TGTAATAGCAAAATTTCTTCAGTACCC 58.264 33.333 0.00 0.00 0.00 3.69
1280 1510 6.165700 TCTTCAGTACCCGTTCTTTTTACT 57.834 37.500 0.00 0.00 0.00 2.24
1335 1566 1.665916 CAGACTGACGGCACACAGG 60.666 63.158 0.00 0.00 36.88 4.00
1336 1567 2.134287 AGACTGACGGCACACAGGT 61.134 57.895 0.00 0.00 36.88 4.00
1413 1644 5.482580 ACCCTATGGATCCTGGTTACATAA 58.517 41.667 14.23 0.00 34.81 1.90
1484 1715 2.265367 TGCCAAGTAGTTCCCTCATCA 58.735 47.619 0.00 0.00 0.00 3.07
1658 1889 2.366916 TGCCCCGAAAAATGATGTTGTT 59.633 40.909 0.00 0.00 0.00 2.83
1788 2019 2.241176 GGAAATGGGTCCATGGTGTCTA 59.759 50.000 12.58 0.98 37.65 2.59
1899 2131 6.789959 AGCATTTACTACCTCCATTCCTAGAT 59.210 38.462 0.00 0.00 0.00 1.98
1918 2150 7.608761 TCCTAGATGTAAGGCGTATTTTGTTTT 59.391 33.333 0.00 0.00 33.84 2.43
1945 2177 9.369904 GTTAAGACATGCATTTGACCAATAATT 57.630 29.630 0.00 0.00 0.00 1.40
2008 2240 8.671921 TGTCACTAGGTTCGTATTTAGAAGTAG 58.328 37.037 0.00 0.00 0.00 2.57
2085 2318 5.234329 TCTTGCTCAAAGTCTTGTCTTAACG 59.766 40.000 0.00 0.00 37.18 3.18
2138 2371 5.367060 GGAGGGAGTAAATAACATCCTCTGT 59.633 44.000 0.00 0.00 43.45 3.41
2319 2552 4.283978 TCTGATGTGAATGGGCAATTGTTT 59.716 37.500 7.40 0.00 0.00 2.83
2331 2564 2.858260 GCAATTGTTTCCACCACGTCTG 60.858 50.000 7.40 0.00 0.00 3.51
2418 2651 3.761897 TGGTGTTCTTTTGGGATGGTAG 58.238 45.455 0.00 0.00 0.00 3.18
2427 2660 5.779771 TCTTTTGGGATGGTAGCTTTTCAAT 59.220 36.000 0.00 0.00 0.00 2.57
2480 2713 7.502120 ACATTGAATGTGAGGCTGATTATAC 57.498 36.000 10.45 0.00 43.01 1.47
2530 2763 2.752358 CCACCTTGCCAGCTCTCA 59.248 61.111 0.00 0.00 0.00 3.27
2735 2984 7.386299 ACACTTTCTGCTTCTTACTGTTGATAG 59.614 37.037 0.00 0.00 0.00 2.08
2817 3066 2.225068 ATTCTTACGATCAGGCACCG 57.775 50.000 0.00 0.00 0.00 4.94
2835 3084 1.069022 CCGACAAATGTGCTTGACAGG 60.069 52.381 0.00 0.00 38.23 4.00
3052 3301 2.812011 GCAAAATCCTACACGTCAAGGT 59.188 45.455 11.52 0.00 34.30 3.50
3068 3317 4.099419 GTCAAGGTTGATTGTTGGGAACTT 59.901 41.667 0.00 0.00 39.73 2.66
3119 3368 4.509616 CAATACAACGGTAATGACCTCCA 58.490 43.478 0.00 0.00 44.46 3.86
3362 3611 8.868916 CCATTTTCTTAAAATATGGTTTGTCCG 58.131 33.333 0.00 0.00 38.97 4.79
3660 3909 5.555017 CCAGTTTCGATCCATGGAATATCT 58.445 41.667 20.67 9.79 32.55 1.98
3714 3963 5.984926 GTCTTCACATTGCATTCTTTTTCCA 59.015 36.000 0.00 0.00 0.00 3.53
3794 4043 2.099756 GCTTCAAATGCAGGTCCCATAC 59.900 50.000 0.00 0.00 0.00 2.39
4160 4409 4.580167 TGTTATGGCAAGCAGGATAATGAC 59.420 41.667 0.00 0.00 0.00 3.06
4306 4555 3.484229 GGATCGTCAAAATTGCGTGAGAG 60.484 47.826 8.86 0.00 0.00 3.20
4307 4556 2.479837 TCGTCAAAATTGCGTGAGAGT 58.520 42.857 8.86 0.00 0.00 3.24
4324 4573 7.521748 GCGTGAGAGTGGAGTTAATATTAGCTA 60.522 40.741 11.37 0.00 0.00 3.32
4325 4574 8.516234 CGTGAGAGTGGAGTTAATATTAGCTAT 58.484 37.037 11.37 0.00 0.00 2.97
4349 4598 0.038166 TTGTCAGATTGGAGGCACCC 59.962 55.000 0.00 0.00 38.00 4.61
4405 4654 7.279615 TCTCTTACAATCAGTTCCAAGACAAA 58.720 34.615 0.00 0.00 0.00 2.83
4611 4864 4.981806 TTCCTGGTCAAGAAAACAGTTG 57.018 40.909 0.00 0.00 0.00 3.16
4612 4865 3.963129 TCCTGGTCAAGAAAACAGTTGT 58.037 40.909 0.00 0.00 0.00 3.32
4613 4866 4.340617 TCCTGGTCAAGAAAACAGTTGTT 58.659 39.130 0.00 0.00 40.50 2.83
4657 4911 4.273148 ACATGGAAGGACAGTACAAGAC 57.727 45.455 0.00 0.00 0.00 3.01
4754 5017 3.940209 TGACTGAATTGTTGAATGGGC 57.060 42.857 0.00 0.00 0.00 5.36
4800 5063 2.279784 GAGCTCTTGATCGGCCCG 60.280 66.667 6.43 0.00 0.00 6.13
4807 5070 3.969250 TTGATCGGCCCGCTTCCAC 62.969 63.158 0.00 0.00 0.00 4.02
4859 5122 2.930562 AAGCCCCTCGTGCTTCCT 60.931 61.111 0.00 0.00 45.58 3.36
4925 5188 2.583593 CCCGCTCGTAGAAGCAGC 60.584 66.667 0.00 0.00 34.09 5.25
5074 5337 9.092876 CTTTATTGATGAGAGTACTCCTGTTTC 57.907 37.037 19.38 10.35 41.99 2.78
5093 5356 0.179150 CTACAGTGCTCAGGACGCTC 60.179 60.000 0.00 0.00 0.00 5.03
5094 5357 0.609406 TACAGTGCTCAGGACGCTCT 60.609 55.000 0.00 0.00 0.00 4.09
5096 5359 0.528017 CAGTGCTCAGGACGCTCTTA 59.472 55.000 0.00 0.00 0.00 2.10
5098 5361 1.203523 AGTGCTCAGGACGCTCTTAAG 59.796 52.381 0.00 0.00 0.00 1.85
5099 5362 0.108615 TGCTCAGGACGCTCTTAAGC 60.109 55.000 0.00 0.00 45.56 3.09
5100 5363 0.808060 GCTCAGGACGCTCTTAAGCC 60.808 60.000 0.00 0.00 46.34 4.35
5101 5364 0.179097 CTCAGGACGCTCTTAAGCCC 60.179 60.000 0.00 0.00 46.34 5.19
5102 5365 1.153349 CAGGACGCTCTTAAGCCCC 60.153 63.158 0.00 0.00 46.34 5.80
5103 5366 2.189784 GGACGCTCTTAAGCCCCC 59.810 66.667 0.00 0.00 46.34 5.40
5104 5367 2.368011 GGACGCTCTTAAGCCCCCT 61.368 63.158 0.00 0.00 46.34 4.79
5105 5368 1.144276 GACGCTCTTAAGCCCCCTC 59.856 63.158 0.00 0.00 46.34 4.30
5106 5369 2.313051 GACGCTCTTAAGCCCCCTCC 62.313 65.000 0.00 0.00 46.34 4.30
5107 5370 2.919839 GCTCTTAAGCCCCCTCCC 59.080 66.667 0.00 0.00 43.10 4.30
5108 5371 2.001269 GCTCTTAAGCCCCCTCCCA 61.001 63.158 0.00 0.00 43.10 4.37
5109 5372 1.571773 GCTCTTAAGCCCCCTCCCAA 61.572 60.000 0.00 0.00 43.10 4.12
5110 5373 1.226311 CTCTTAAGCCCCCTCCCAAT 58.774 55.000 0.00 0.00 0.00 3.16
5111 5374 0.926293 TCTTAAGCCCCCTCCCAATG 59.074 55.000 0.00 0.00 0.00 2.82
5112 5375 0.756815 CTTAAGCCCCCTCCCAATGC 60.757 60.000 0.00 0.00 0.00 3.56
5113 5376 1.221213 TTAAGCCCCCTCCCAATGCT 61.221 55.000 0.00 0.00 0.00 3.79
5114 5377 1.221213 TAAGCCCCCTCCCAATGCTT 61.221 55.000 0.00 0.00 43.97 3.91
5115 5378 2.442830 GCCCCCTCCCAATGCTTC 60.443 66.667 0.00 0.00 0.00 3.86
5116 5379 3.099171 CCCCCTCCCAATGCTTCA 58.901 61.111 0.00 0.00 0.00 3.02
5117 5380 1.622499 CCCCCTCCCAATGCTTCAT 59.378 57.895 0.00 0.00 0.00 2.57
5118 5381 0.468771 CCCCCTCCCAATGCTTCATC 60.469 60.000 0.00 0.00 0.00 2.92
5119 5382 0.554792 CCCCTCCCAATGCTTCATCT 59.445 55.000 0.00 0.00 0.00 2.90
5120 5383 1.063417 CCCCTCCCAATGCTTCATCTT 60.063 52.381 0.00 0.00 0.00 2.40
5121 5384 2.029623 CCCTCCCAATGCTTCATCTTG 58.970 52.381 0.00 0.00 0.00 3.02
5122 5385 2.622452 CCCTCCCAATGCTTCATCTTGT 60.622 50.000 0.00 0.00 0.00 3.16
5123 5386 3.371917 CCCTCCCAATGCTTCATCTTGTA 60.372 47.826 0.00 0.00 0.00 2.41
5124 5387 3.629398 CCTCCCAATGCTTCATCTTGTAC 59.371 47.826 0.00 0.00 0.00 2.90
5125 5388 4.264253 CTCCCAATGCTTCATCTTGTACA 58.736 43.478 0.00 0.00 0.00 2.90
5126 5389 4.661222 TCCCAATGCTTCATCTTGTACAA 58.339 39.130 8.28 8.28 0.00 2.41
5127 5390 4.701651 TCCCAATGCTTCATCTTGTACAAG 59.298 41.667 26.60 26.60 39.71 3.16
5128 5391 4.460382 CCCAATGCTTCATCTTGTACAAGT 59.540 41.667 29.83 17.34 39.38 3.16
5129 5392 5.396484 CCAATGCTTCATCTTGTACAAGTG 58.604 41.667 29.83 25.40 39.38 3.16
5130 5393 4.691860 ATGCTTCATCTTGTACAAGTGC 57.308 40.909 29.83 24.58 39.38 4.40
5131 5394 3.743521 TGCTTCATCTTGTACAAGTGCT 58.256 40.909 29.83 16.13 39.38 4.40
5132 5395 4.893608 TGCTTCATCTTGTACAAGTGCTA 58.106 39.130 29.83 14.98 39.38 3.49
5133 5396 5.304778 TGCTTCATCTTGTACAAGTGCTAA 58.695 37.500 29.83 19.54 39.38 3.09
5134 5397 5.409520 TGCTTCATCTTGTACAAGTGCTAAG 59.590 40.000 29.83 25.84 39.38 2.18
5135 5398 5.672321 GCTTCATCTTGTACAAGTGCTAAGC 60.672 44.000 29.26 29.26 39.38 3.09
5136 5399 4.253685 TCATCTTGTACAAGTGCTAAGCC 58.746 43.478 29.83 0.00 39.38 4.35
5137 5400 4.020218 TCATCTTGTACAAGTGCTAAGCCT 60.020 41.667 29.83 6.94 39.38 4.58
5138 5401 4.351874 TCTTGTACAAGTGCTAAGCCTT 57.648 40.909 29.83 0.00 39.38 4.35
5139 5402 4.315803 TCTTGTACAAGTGCTAAGCCTTC 58.684 43.478 29.83 0.00 39.38 3.46
5140 5403 4.040461 TCTTGTACAAGTGCTAAGCCTTCT 59.960 41.667 29.83 0.00 39.38 2.85
5141 5404 5.245301 TCTTGTACAAGTGCTAAGCCTTCTA 59.755 40.000 29.83 7.50 39.38 2.10
5142 5405 5.677319 TGTACAAGTGCTAAGCCTTCTAT 57.323 39.130 0.00 0.00 0.00 1.98
5143 5406 5.419542 TGTACAAGTGCTAAGCCTTCTATG 58.580 41.667 0.00 0.00 0.00 2.23
5144 5407 4.559862 ACAAGTGCTAAGCCTTCTATGT 57.440 40.909 0.00 0.00 0.00 2.29
5145 5408 5.677319 ACAAGTGCTAAGCCTTCTATGTA 57.323 39.130 0.00 0.00 0.00 2.29
5146 5409 6.240549 ACAAGTGCTAAGCCTTCTATGTAT 57.759 37.500 0.00 0.00 0.00 2.29
5147 5410 6.051717 ACAAGTGCTAAGCCTTCTATGTATG 58.948 40.000 0.00 0.00 0.00 2.39
5148 5411 4.636249 AGTGCTAAGCCTTCTATGTATGC 58.364 43.478 0.00 0.00 0.00 3.14
5149 5412 4.101585 AGTGCTAAGCCTTCTATGTATGCA 59.898 41.667 0.00 0.00 0.00 3.96
5150 5413 4.816385 GTGCTAAGCCTTCTATGTATGCAA 59.184 41.667 0.00 0.00 0.00 4.08
5151 5414 5.296780 GTGCTAAGCCTTCTATGTATGCAAA 59.703 40.000 0.00 0.00 0.00 3.68
5152 5415 5.885352 TGCTAAGCCTTCTATGTATGCAAAA 59.115 36.000 0.00 0.00 0.00 2.44
5153 5416 6.376864 TGCTAAGCCTTCTATGTATGCAAAAA 59.623 34.615 0.00 0.00 0.00 1.94
5171 5434 2.514458 AAATCTGATGTGGTGACCCC 57.486 50.000 0.00 0.00 0.00 4.95
5172 5435 1.371467 AATCTGATGTGGTGACCCCA 58.629 50.000 0.00 0.00 42.51 4.96
5173 5436 0.914644 ATCTGATGTGGTGACCCCAG 59.085 55.000 0.00 1.66 46.45 4.45
5174 5437 0.473694 TCTGATGTGGTGACCCCAGT 60.474 55.000 0.00 0.00 46.45 4.00
5175 5438 1.203250 TCTGATGTGGTGACCCCAGTA 60.203 52.381 0.00 0.00 46.45 2.74
5176 5439 1.628340 CTGATGTGGTGACCCCAGTAA 59.372 52.381 0.00 0.00 46.45 2.24
5177 5440 2.039746 CTGATGTGGTGACCCCAGTAAA 59.960 50.000 0.00 0.00 46.45 2.01
5178 5441 2.443632 TGATGTGGTGACCCCAGTAAAA 59.556 45.455 0.00 0.00 46.45 1.52
5179 5442 3.117474 TGATGTGGTGACCCCAGTAAAAA 60.117 43.478 0.00 0.00 46.45 1.94
5197 5460 3.980646 AAAACAATGCTAAGCACGTGA 57.019 38.095 22.23 0.00 43.04 4.35
5198 5461 3.980646 AAACAATGCTAAGCACGTGAA 57.019 38.095 22.23 2.30 43.04 3.18
5199 5462 2.969443 ACAATGCTAAGCACGTGAAC 57.031 45.000 22.23 1.65 43.04 3.18
5200 5463 1.535462 ACAATGCTAAGCACGTGAACC 59.465 47.619 22.23 0.78 43.04 3.62
5201 5464 1.806542 CAATGCTAAGCACGTGAACCT 59.193 47.619 22.23 3.67 43.04 3.50
5202 5465 3.000041 CAATGCTAAGCACGTGAACCTA 59.000 45.455 22.23 3.01 43.04 3.08
5203 5466 2.363788 TGCTAAGCACGTGAACCTAG 57.636 50.000 22.23 13.51 31.71 3.02
5204 5467 1.616865 TGCTAAGCACGTGAACCTAGT 59.383 47.619 22.23 0.00 31.71 2.57
5205 5468 2.260481 GCTAAGCACGTGAACCTAGTC 58.740 52.381 22.23 0.00 0.00 2.59
5206 5469 2.352421 GCTAAGCACGTGAACCTAGTCA 60.352 50.000 22.23 0.00 0.00 3.41
5207 5470 2.902705 AAGCACGTGAACCTAGTCAA 57.097 45.000 22.23 0.00 0.00 3.18
5208 5471 2.902705 AGCACGTGAACCTAGTCAAA 57.097 45.000 22.23 0.00 0.00 2.69
5209 5472 3.188159 AGCACGTGAACCTAGTCAAAA 57.812 42.857 22.23 0.00 0.00 2.44
5210 5473 3.740115 AGCACGTGAACCTAGTCAAAAT 58.260 40.909 22.23 0.00 0.00 1.82
5211 5474 4.890088 AGCACGTGAACCTAGTCAAAATA 58.110 39.130 22.23 0.00 0.00 1.40
5212 5475 5.488341 AGCACGTGAACCTAGTCAAAATAT 58.512 37.500 22.23 0.00 0.00 1.28
5213 5476 5.938125 AGCACGTGAACCTAGTCAAAATATT 59.062 36.000 22.23 0.00 0.00 1.28
5214 5477 6.430000 AGCACGTGAACCTAGTCAAAATATTT 59.570 34.615 22.23 0.00 0.00 1.40
5215 5478 7.604927 AGCACGTGAACCTAGTCAAAATATTTA 59.395 33.333 22.23 0.00 0.00 1.40
5216 5479 8.231837 GCACGTGAACCTAGTCAAAATATTTAA 58.768 33.333 22.23 0.00 0.00 1.52
5217 5480 9.755064 CACGTGAACCTAGTCAAAATATTTAAG 57.245 33.333 10.90 0.00 0.00 1.85
5218 5481 8.943002 ACGTGAACCTAGTCAAAATATTTAAGG 58.057 33.333 0.01 6.53 0.00 2.69
5219 5482 9.158233 CGTGAACCTAGTCAAAATATTTAAGGA 57.842 33.333 15.07 6.70 0.00 3.36
5228 5491 9.244292 AGTCAAAATATTTAAGGAAGGAAGTCC 57.756 33.333 0.01 0.00 38.03 3.85
5229 5492 9.020731 GTCAAAATATTTAAGGAAGGAAGTCCA 57.979 33.333 0.01 0.00 40.48 4.02
5230 5493 9.020731 TCAAAATATTTAAGGAAGGAAGTCCAC 57.979 33.333 0.01 0.00 40.48 4.02
5231 5494 7.956328 AAATATTTAAGGAAGGAAGTCCACC 57.044 36.000 0.00 3.04 40.48 4.61
5232 5495 6.652205 ATATTTAAGGAAGGAAGTCCACCA 57.348 37.500 13.50 0.00 40.48 4.17
5233 5496 4.367039 TTTAAGGAAGGAAGTCCACCAG 57.633 45.455 13.50 0.00 40.48 4.00
5234 5497 1.821088 AAGGAAGGAAGTCCACCAGT 58.179 50.000 13.50 1.98 40.48 4.00
5235 5498 2.715763 AGGAAGGAAGTCCACCAGTA 57.284 50.000 13.50 0.00 40.48 2.74
5236 5499 2.258109 AGGAAGGAAGTCCACCAGTAC 58.742 52.381 13.50 0.00 40.48 2.73
5237 5500 1.975680 GGAAGGAAGTCCACCAGTACA 59.024 52.381 0.00 0.00 37.65 2.90
5238 5501 2.572104 GGAAGGAAGTCCACCAGTACAT 59.428 50.000 0.00 0.00 37.65 2.29
5239 5502 3.600388 GAAGGAAGTCCACCAGTACATG 58.400 50.000 0.00 0.00 38.89 3.21
5240 5503 2.902608 AGGAAGTCCACCAGTACATGA 58.097 47.619 0.00 0.00 38.89 3.07
5241 5504 3.248024 AGGAAGTCCACCAGTACATGAA 58.752 45.455 0.00 0.00 38.89 2.57
5242 5505 3.261897 AGGAAGTCCACCAGTACATGAAG 59.738 47.826 0.00 0.00 38.89 3.02
5243 5506 3.260884 GGAAGTCCACCAGTACATGAAGA 59.739 47.826 0.00 0.00 35.64 2.87
5244 5507 4.499183 GAAGTCCACCAGTACATGAAGAG 58.501 47.826 0.00 0.00 0.00 2.85
5245 5508 2.234908 AGTCCACCAGTACATGAAGAGC 59.765 50.000 0.00 0.00 0.00 4.09
5246 5509 2.234908 GTCCACCAGTACATGAAGAGCT 59.765 50.000 0.00 0.00 0.00 4.09
5247 5510 2.497675 TCCACCAGTACATGAAGAGCTC 59.502 50.000 5.27 5.27 0.00 4.09
5248 5511 2.499289 CCACCAGTACATGAAGAGCTCT 59.501 50.000 11.45 11.45 0.00 4.09
5249 5512 3.701542 CCACCAGTACATGAAGAGCTCTA 59.298 47.826 18.59 1.85 0.00 2.43
5250 5513 4.202101 CCACCAGTACATGAAGAGCTCTAG 60.202 50.000 18.59 10.07 0.00 2.43
5251 5514 4.400884 CACCAGTACATGAAGAGCTCTAGT 59.599 45.833 18.59 15.28 0.00 2.57
5252 5515 5.020132 ACCAGTACATGAAGAGCTCTAGTT 58.980 41.667 18.59 0.14 0.00 2.24
5253 5516 5.105554 ACCAGTACATGAAGAGCTCTAGTTG 60.106 44.000 18.59 16.17 0.00 3.16
5254 5517 4.803088 CAGTACATGAAGAGCTCTAGTTGC 59.197 45.833 18.59 9.79 0.00 4.17
5255 5518 4.709397 AGTACATGAAGAGCTCTAGTTGCT 59.291 41.667 18.59 11.57 44.24 3.91
5256 5519 5.888724 AGTACATGAAGAGCTCTAGTTGCTA 59.111 40.000 18.59 7.15 41.30 3.49
5257 5520 5.667539 ACATGAAGAGCTCTAGTTGCTAA 57.332 39.130 18.59 0.00 41.30 3.09
5258 5521 6.042638 ACATGAAGAGCTCTAGTTGCTAAA 57.957 37.500 18.59 0.00 41.30 1.85
5259 5522 6.648192 ACATGAAGAGCTCTAGTTGCTAAAT 58.352 36.000 18.59 0.00 41.30 1.40
5260 5523 6.760770 ACATGAAGAGCTCTAGTTGCTAAATC 59.239 38.462 18.59 7.22 41.30 2.17
5261 5524 6.286240 TGAAGAGCTCTAGTTGCTAAATCA 57.714 37.500 18.59 9.96 41.30 2.57
5262 5525 6.882656 TGAAGAGCTCTAGTTGCTAAATCAT 58.117 36.000 18.59 0.00 41.30 2.45
5263 5526 7.334090 TGAAGAGCTCTAGTTGCTAAATCATT 58.666 34.615 18.59 0.00 41.30 2.57
5264 5527 8.478066 TGAAGAGCTCTAGTTGCTAAATCATTA 58.522 33.333 18.59 0.00 41.30 1.90
5265 5528 9.319143 GAAGAGCTCTAGTTGCTAAATCATTAA 57.681 33.333 18.59 0.00 41.30 1.40
5266 5529 9.672673 AAGAGCTCTAGTTGCTAAATCATTAAA 57.327 29.630 18.59 0.00 41.30 1.52
5267 5530 9.103861 AGAGCTCTAGTTGCTAAATCATTAAAC 57.896 33.333 16.50 0.00 41.30 2.01
5268 5531 7.910304 AGCTCTAGTTGCTAAATCATTAAACG 58.090 34.615 10.38 0.00 39.21 3.60
5269 5532 7.764443 AGCTCTAGTTGCTAAATCATTAAACGA 59.236 33.333 10.38 0.00 39.21 3.85
5270 5533 8.388103 GCTCTAGTTGCTAAATCATTAAACGAA 58.612 33.333 0.00 0.00 0.00 3.85
5271 5534 9.907576 CTCTAGTTGCTAAATCATTAAACGAAG 57.092 33.333 0.00 0.00 0.00 3.79
5272 5535 8.388103 TCTAGTTGCTAAATCATTAAACGAAGC 58.612 33.333 0.00 0.00 0.00 3.86
5273 5536 6.908825 AGTTGCTAAATCATTAAACGAAGCA 58.091 32.000 0.00 0.00 0.00 3.91
5274 5537 7.367285 AGTTGCTAAATCATTAAACGAAGCAA 58.633 30.769 9.87 9.87 36.41 3.91
5275 5538 7.538678 AGTTGCTAAATCATTAAACGAAGCAAG 59.461 33.333 12.55 0.00 38.86 4.01
5276 5539 5.799936 TGCTAAATCATTAAACGAAGCAAGC 59.200 36.000 0.00 0.00 0.00 4.01
5277 5540 6.030228 GCTAAATCATTAAACGAAGCAAGCT 58.970 36.000 0.00 0.00 0.00 3.74
5278 5541 6.528072 GCTAAATCATTAAACGAAGCAAGCTT 59.472 34.615 7.07 7.07 39.23 3.74
5279 5542 7.696453 GCTAAATCATTAAACGAAGCAAGCTTA 59.304 33.333 7.37 0.00 36.26 3.09
5280 5543 9.214953 CTAAATCATTAAACGAAGCAAGCTTAG 57.785 33.333 7.37 10.23 36.26 2.18
5281 5544 4.969816 TCATTAAACGAAGCAAGCTTAGC 58.030 39.130 13.65 5.67 36.26 3.09
5282 5545 4.454161 TCATTAAACGAAGCAAGCTTAGCA 59.546 37.500 18.74 0.00 36.26 3.49
5283 5546 4.822036 TTAAACGAAGCAAGCTTAGCAA 57.178 36.364 18.74 4.54 36.26 3.91
5284 5547 2.688364 AACGAAGCAAGCTTAGCAAC 57.312 45.000 18.74 12.37 36.26 4.17
5285 5548 0.875059 ACGAAGCAAGCTTAGCAACC 59.125 50.000 18.74 9.11 36.26 3.77
5286 5549 0.874390 CGAAGCAAGCTTAGCAACCA 59.126 50.000 18.74 0.00 36.26 3.67
5287 5550 1.470098 CGAAGCAAGCTTAGCAACCAT 59.530 47.619 18.74 0.00 36.26 3.55
5288 5551 2.677836 CGAAGCAAGCTTAGCAACCATA 59.322 45.455 18.74 0.00 36.26 2.74
5289 5552 3.126858 CGAAGCAAGCTTAGCAACCATAA 59.873 43.478 18.74 0.00 36.26 1.90
5290 5553 4.666237 GAAGCAAGCTTAGCAACCATAAG 58.334 43.478 18.74 0.00 36.26 1.73
5291 5554 3.955471 AGCAAGCTTAGCAACCATAAGA 58.045 40.909 18.74 0.00 32.96 2.10
5292 5555 3.691609 AGCAAGCTTAGCAACCATAAGAC 59.308 43.478 18.74 0.00 32.96 3.01
5293 5556 3.691609 GCAAGCTTAGCAACCATAAGACT 59.308 43.478 7.07 0.00 32.96 3.24
5294 5557 4.876107 GCAAGCTTAGCAACCATAAGACTA 59.124 41.667 7.07 0.00 32.96 2.59
5295 5558 5.007136 GCAAGCTTAGCAACCATAAGACTAG 59.993 44.000 7.07 0.00 32.96 2.57
5296 5559 4.698575 AGCTTAGCAACCATAAGACTAGC 58.301 43.478 7.07 0.00 32.96 3.42
5297 5560 3.810386 GCTTAGCAACCATAAGACTAGCC 59.190 47.826 0.00 0.00 32.96 3.93
5298 5561 4.683400 GCTTAGCAACCATAAGACTAGCCA 60.683 45.833 0.00 0.00 32.96 4.75
5299 5562 3.268023 AGCAACCATAAGACTAGCCAC 57.732 47.619 0.00 0.00 0.00 5.01
5300 5563 2.571653 AGCAACCATAAGACTAGCCACA 59.428 45.455 0.00 0.00 0.00 4.17
5301 5564 2.939103 GCAACCATAAGACTAGCCACAG 59.061 50.000 0.00 0.00 0.00 3.66
5302 5565 3.619979 GCAACCATAAGACTAGCCACAGT 60.620 47.826 0.00 0.00 0.00 3.55
5303 5566 3.895232 ACCATAAGACTAGCCACAGTG 57.105 47.619 0.00 0.00 0.00 3.66
5304 5567 2.501723 ACCATAAGACTAGCCACAGTGG 59.498 50.000 16.16 16.16 41.55 4.00
5305 5568 2.158900 CCATAAGACTAGCCACAGTGGG 60.159 54.545 21.77 7.25 38.19 4.61
5306 5569 2.615986 TAAGACTAGCCACAGTGGGA 57.384 50.000 21.77 0.00 38.19 4.37
5307 5570 1.270907 AAGACTAGCCACAGTGGGAG 58.729 55.000 21.77 0.00 38.19 4.30
5308 5571 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
5309 5572 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
5310 5573 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
5311 5574 1.900486 ACTAGCCACAGTGGGAGTAAC 59.100 52.381 21.77 3.06 38.19 2.50
5312 5575 1.899814 CTAGCCACAGTGGGAGTAACA 59.100 52.381 21.77 0.00 38.19 2.41
5313 5576 1.136828 AGCCACAGTGGGAGTAACAA 58.863 50.000 21.77 0.00 38.19 2.83
5314 5577 1.202770 AGCCACAGTGGGAGTAACAAC 60.203 52.381 21.77 0.78 38.19 3.32
5315 5578 1.476110 GCCACAGTGGGAGTAACAACA 60.476 52.381 21.77 0.00 38.19 3.33
5316 5579 2.814097 GCCACAGTGGGAGTAACAACAT 60.814 50.000 21.77 0.00 38.19 2.71
5317 5580 3.074412 CCACAGTGGGAGTAACAACATC 58.926 50.000 12.40 0.00 32.67 3.06
5318 5581 2.736721 CACAGTGGGAGTAACAACATCG 59.263 50.000 0.00 0.00 0.00 3.84
5319 5582 2.631062 ACAGTGGGAGTAACAACATCGA 59.369 45.455 0.00 0.00 0.00 3.59
5320 5583 3.254060 CAGTGGGAGTAACAACATCGAG 58.746 50.000 0.00 0.00 0.00 4.04
5321 5584 2.897969 AGTGGGAGTAACAACATCGAGT 59.102 45.455 0.00 0.00 0.00 4.18
5322 5585 3.056749 AGTGGGAGTAACAACATCGAGTC 60.057 47.826 0.00 0.00 0.00 3.36
5323 5586 2.232941 TGGGAGTAACAACATCGAGTCC 59.767 50.000 0.00 0.00 0.00 3.85
5324 5587 2.232941 GGGAGTAACAACATCGAGTCCA 59.767 50.000 0.00 0.00 33.70 4.02
5325 5588 3.306502 GGGAGTAACAACATCGAGTCCAA 60.307 47.826 0.00 0.00 33.70 3.53
5326 5589 3.678548 GGAGTAACAACATCGAGTCCAAC 59.321 47.826 0.00 0.00 32.52 3.77
5327 5590 4.557205 GAGTAACAACATCGAGTCCAACT 58.443 43.478 0.00 0.00 0.00 3.16
5328 5591 5.336213 GGAGTAACAACATCGAGTCCAACTA 60.336 44.000 0.00 0.00 32.52 2.24
5329 5592 6.092955 AGTAACAACATCGAGTCCAACTAA 57.907 37.500 0.00 0.00 0.00 2.24
5330 5593 6.157211 AGTAACAACATCGAGTCCAACTAAG 58.843 40.000 0.00 0.00 0.00 2.18
5331 5594 3.326747 ACAACATCGAGTCCAACTAAGC 58.673 45.455 0.00 0.00 0.00 3.09
5332 5595 3.244078 ACAACATCGAGTCCAACTAAGCA 60.244 43.478 0.00 0.00 0.00 3.91
5333 5596 3.678056 ACATCGAGTCCAACTAAGCAA 57.322 42.857 0.00 0.00 0.00 3.91
5334 5597 4.002906 ACATCGAGTCCAACTAAGCAAA 57.997 40.909 0.00 0.00 0.00 3.68
5335 5598 4.579869 ACATCGAGTCCAACTAAGCAAAT 58.420 39.130 0.00 0.00 0.00 2.32
5336 5599 5.003804 ACATCGAGTCCAACTAAGCAAATT 58.996 37.500 0.00 0.00 0.00 1.82
5337 5600 5.473504 ACATCGAGTCCAACTAAGCAAATTT 59.526 36.000 0.00 0.00 0.00 1.82
5338 5601 5.356882 TCGAGTCCAACTAAGCAAATTTG 57.643 39.130 14.03 14.03 0.00 2.32
5356 5619 8.428186 CAAATTTGCTTATATGGCAATGAGTT 57.572 30.769 15.30 7.40 46.81 3.01
5357 5620 9.531942 CAAATTTGCTTATATGGCAATGAGTTA 57.468 29.630 15.30 4.12 46.81 2.24
5360 5623 9.701098 ATTTGCTTATATGGCAATGAGTTAATG 57.299 29.630 15.30 0.00 46.81 1.90
5361 5624 8.462589 TTGCTTATATGGCAATGAGTTAATGA 57.537 30.769 11.99 0.00 43.50 2.57
5362 5625 8.102800 TGCTTATATGGCAATGAGTTAATGAG 57.897 34.615 0.00 0.00 36.71 2.90
5363 5626 7.175467 TGCTTATATGGCAATGAGTTAATGAGG 59.825 37.037 0.00 0.00 36.71 3.86
5364 5627 7.391554 GCTTATATGGCAATGAGTTAATGAGGA 59.608 37.037 0.00 0.00 0.00 3.71
5365 5628 8.853077 TTATATGGCAATGAGTTAATGAGGAG 57.147 34.615 0.00 0.00 0.00 3.69
5366 5629 4.842531 TGGCAATGAGTTAATGAGGAGA 57.157 40.909 0.00 0.00 0.00 3.71
5367 5630 4.774124 TGGCAATGAGTTAATGAGGAGAG 58.226 43.478 0.00 0.00 0.00 3.20
5368 5631 4.133078 GGCAATGAGTTAATGAGGAGAGG 58.867 47.826 0.00 0.00 0.00 3.69
5369 5632 4.384647 GGCAATGAGTTAATGAGGAGAGGT 60.385 45.833 0.00 0.00 0.00 3.85
5370 5633 5.163301 GGCAATGAGTTAATGAGGAGAGGTA 60.163 44.000 0.00 0.00 0.00 3.08
5371 5634 5.988561 GCAATGAGTTAATGAGGAGAGGTAG 59.011 44.000 0.00 0.00 0.00 3.18
5372 5635 6.407525 GCAATGAGTTAATGAGGAGAGGTAGT 60.408 42.308 0.00 0.00 0.00 2.73
5373 5636 7.560368 CAATGAGTTAATGAGGAGAGGTAGTT 58.440 38.462 0.00 0.00 0.00 2.24
5374 5637 7.741554 ATGAGTTAATGAGGAGAGGTAGTTT 57.258 36.000 0.00 0.00 0.00 2.66
5375 5638 6.936279 TGAGTTAATGAGGAGAGGTAGTTTG 58.064 40.000 0.00 0.00 0.00 2.93
5376 5639 6.724441 TGAGTTAATGAGGAGAGGTAGTTTGA 59.276 38.462 0.00 0.00 0.00 2.69
5377 5640 7.093727 TGAGTTAATGAGGAGAGGTAGTTTGAG 60.094 40.741 0.00 0.00 0.00 3.02
5378 5641 6.726764 AGTTAATGAGGAGAGGTAGTTTGAGT 59.273 38.462 0.00 0.00 0.00 3.41
5379 5642 7.894364 AGTTAATGAGGAGAGGTAGTTTGAGTA 59.106 37.037 0.00 0.00 0.00 2.59
5380 5643 8.529476 GTTAATGAGGAGAGGTAGTTTGAGTAA 58.471 37.037 0.00 0.00 0.00 2.24
5381 5644 5.979288 TGAGGAGAGGTAGTTTGAGTAAC 57.021 43.478 0.00 0.00 36.99 2.50
5383 5646 6.075984 TGAGGAGAGGTAGTTTGAGTAACTT 58.924 40.000 0.00 0.00 44.73 2.66
5384 5647 7.236529 TGAGGAGAGGTAGTTTGAGTAACTTA 58.763 38.462 0.00 0.00 44.73 2.24
5385 5648 7.393796 TGAGGAGAGGTAGTTTGAGTAACTTAG 59.606 40.741 0.00 0.00 44.73 2.18
5386 5649 6.153170 AGGAGAGGTAGTTTGAGTAACTTAGC 59.847 42.308 0.00 0.00 44.73 3.09
5387 5650 6.153170 GGAGAGGTAGTTTGAGTAACTTAGCT 59.847 42.308 0.00 0.00 44.73 3.32
5388 5651 7.338957 GGAGAGGTAGTTTGAGTAACTTAGCTA 59.661 40.741 0.00 0.00 44.73 3.32
5389 5652 8.283699 AGAGGTAGTTTGAGTAACTTAGCTAG 57.716 38.462 0.00 0.00 44.73 3.42
5390 5653 7.889600 AGAGGTAGTTTGAGTAACTTAGCTAGT 59.110 37.037 0.00 0.00 44.73 2.57
5391 5654 8.419922 AGGTAGTTTGAGTAACTTAGCTAGTT 57.580 34.615 11.59 11.59 44.73 2.24
5392 5655 9.525826 AGGTAGTTTGAGTAACTTAGCTAGTTA 57.474 33.333 10.09 10.09 44.73 2.24
5403 5666 6.764308 ACTTAGCTAGTTACGGTAACATCA 57.236 37.500 27.45 14.18 41.07 3.07
5404 5667 6.558909 ACTTAGCTAGTTACGGTAACATCAC 58.441 40.000 27.45 15.97 41.07 3.06
5405 5668 6.151648 ACTTAGCTAGTTACGGTAACATCACA 59.848 38.462 27.45 10.88 41.07 3.58
5406 5669 5.593679 AGCTAGTTACGGTAACATCACAT 57.406 39.130 27.45 12.14 41.07 3.21
5407 5670 5.348986 AGCTAGTTACGGTAACATCACATG 58.651 41.667 27.45 12.82 41.07 3.21
5409 5672 5.231568 GCTAGTTACGGTAACATCACATGTC 59.768 44.000 27.45 2.46 44.07 3.06
5410 5673 4.501071 AGTTACGGTAACATCACATGTCC 58.499 43.478 27.45 2.00 44.07 4.02
5411 5674 2.396590 ACGGTAACATCACATGTCCC 57.603 50.000 0.00 0.00 44.07 4.46
5412 5675 1.626321 ACGGTAACATCACATGTCCCA 59.374 47.619 0.00 0.00 44.07 4.37
5413 5676 2.039216 ACGGTAACATCACATGTCCCAA 59.961 45.455 0.00 0.00 44.07 4.12
5414 5677 3.278574 CGGTAACATCACATGTCCCAAT 58.721 45.455 0.00 0.00 44.07 3.16
5415 5678 3.065233 CGGTAACATCACATGTCCCAATG 59.935 47.826 0.00 0.45 44.07 2.82
5416 5679 3.181487 GGTAACATCACATGTCCCAATGC 60.181 47.826 0.00 0.00 44.07 3.56
5417 5680 2.219080 ACATCACATGTCCCAATGCA 57.781 45.000 0.00 0.00 39.92 3.96
5418 5681 2.742348 ACATCACATGTCCCAATGCAT 58.258 42.857 0.00 0.00 39.92 3.96
5419 5682 3.101437 ACATCACATGTCCCAATGCATT 58.899 40.909 5.99 5.99 39.92 3.56
5420 5683 4.279982 ACATCACATGTCCCAATGCATTA 58.720 39.130 12.53 0.00 39.92 1.90
5421 5684 4.897076 ACATCACATGTCCCAATGCATTAT 59.103 37.500 12.53 0.00 39.92 1.28
5422 5685 4.922471 TCACATGTCCCAATGCATTATG 57.078 40.909 12.53 13.88 0.00 1.90
5423 5686 4.534797 TCACATGTCCCAATGCATTATGA 58.465 39.130 20.68 13.88 0.00 2.15
5424 5687 4.581409 TCACATGTCCCAATGCATTATGAG 59.419 41.667 20.68 14.84 0.00 2.90
5425 5688 4.340097 CACATGTCCCAATGCATTATGAGT 59.660 41.667 20.68 9.38 0.00 3.41
5426 5689 4.581824 ACATGTCCCAATGCATTATGAGTC 59.418 41.667 20.68 8.02 0.00 3.36
5427 5690 4.508551 TGTCCCAATGCATTATGAGTCT 57.491 40.909 12.53 0.00 0.00 3.24
5428 5691 5.628797 TGTCCCAATGCATTATGAGTCTA 57.371 39.130 12.53 0.00 0.00 2.59
5429 5692 6.191657 TGTCCCAATGCATTATGAGTCTAT 57.808 37.500 12.53 0.00 0.00 1.98
5430 5693 7.315066 TGTCCCAATGCATTATGAGTCTATA 57.685 36.000 12.53 0.00 0.00 1.31
5431 5694 7.744733 TGTCCCAATGCATTATGAGTCTATAA 58.255 34.615 12.53 0.00 0.00 0.98
5432 5695 7.661437 TGTCCCAATGCATTATGAGTCTATAAC 59.339 37.037 12.53 0.00 0.00 1.89
5433 5696 7.119846 GTCCCAATGCATTATGAGTCTATAACC 59.880 40.741 12.53 0.00 0.00 2.85
5434 5697 7.017551 TCCCAATGCATTATGAGTCTATAACCT 59.982 37.037 12.53 0.00 0.00 3.50
5435 5698 8.321353 CCCAATGCATTATGAGTCTATAACCTA 58.679 37.037 12.53 0.00 0.00 3.08
5436 5699 9.725019 CCAATGCATTATGAGTCTATAACCTAA 57.275 33.333 12.53 0.00 0.00 2.69
5451 5714 9.712305 TCTATAACCTAATAAATGAAGCTCTGC 57.288 33.333 0.00 0.00 0.00 4.26
5452 5715 9.494271 CTATAACCTAATAAATGAAGCTCTGCA 57.506 33.333 0.00 0.00 0.00 4.41
5453 5716 8.930846 ATAACCTAATAAATGAAGCTCTGCAT 57.069 30.769 0.00 0.00 0.00 3.96
5454 5717 6.630444 ACCTAATAAATGAAGCTCTGCATG 57.370 37.500 0.00 0.00 0.00 4.06
5455 5718 6.359804 ACCTAATAAATGAAGCTCTGCATGA 58.640 36.000 0.00 0.00 0.00 3.07
5456 5719 6.261826 ACCTAATAAATGAAGCTCTGCATGAC 59.738 38.462 0.00 0.00 0.00 3.06
5457 5720 6.261603 CCTAATAAATGAAGCTCTGCATGACA 59.738 38.462 0.00 0.00 0.00 3.58
5458 5721 3.844577 AAATGAAGCTCTGCATGACAC 57.155 42.857 0.00 0.00 0.00 3.67
5459 5722 1.747709 ATGAAGCTCTGCATGACACC 58.252 50.000 0.00 0.00 0.00 4.16
5460 5723 0.397564 TGAAGCTCTGCATGACACCA 59.602 50.000 0.00 0.00 0.00 4.17
5461 5724 0.801251 GAAGCTCTGCATGACACCAC 59.199 55.000 0.00 0.00 0.00 4.16
5462 5725 0.109153 AAGCTCTGCATGACACCACA 59.891 50.000 0.00 0.00 0.00 4.17
5463 5726 0.604780 AGCTCTGCATGACACCACAC 60.605 55.000 0.00 0.00 0.00 3.82
5464 5727 0.604780 GCTCTGCATGACACCACACT 60.605 55.000 0.00 0.00 0.00 3.55
5465 5728 1.888215 CTCTGCATGACACCACACTT 58.112 50.000 0.00 0.00 0.00 3.16
5466 5729 2.871637 GCTCTGCATGACACCACACTTA 60.872 50.000 0.00 0.00 0.00 2.24
5467 5730 2.998670 CTCTGCATGACACCACACTTAG 59.001 50.000 0.00 0.00 0.00 2.18
5468 5731 2.368548 TCTGCATGACACCACACTTAGT 59.631 45.455 0.00 0.00 0.00 2.24
5485 5748 8.632906 ACACTTAGTGAGTAACATACACTAGT 57.367 34.615 20.07 0.00 44.24 2.57
5486 5749 9.730705 ACACTTAGTGAGTAACATACACTAGTA 57.269 33.333 20.07 0.00 44.24 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 4.920112 TCCAACCCACACGCCACG 62.920 66.667 0.00 0.00 0.00 4.94
231 233 5.298276 ACGAAAACAGCAGAGACCAATTTTA 59.702 36.000 0.00 0.00 0.00 1.52
261 263 5.765176 AGTTTGTGTCGGCCTAATTTTAAC 58.235 37.500 0.00 0.00 0.00 2.01
295 298 7.721402 TGTAGACTTTGTTGCATAACCAAAAT 58.279 30.769 0.00 0.00 35.92 1.82
330 363 8.606040 TCATCATTCTGTATAATTTGATGCGA 57.394 30.769 7.36 0.00 39.98 5.10
342 375 8.255111 TCAGGAACACTATCATCATTCTGTAT 57.745 34.615 0.00 0.00 0.00 2.29
393 426 9.378551 TCACACCTACAATCATCAAAATACTAC 57.621 33.333 0.00 0.00 0.00 2.73
432 465 5.273208 AGACTAGTGTGTCCCAGATTACAT 58.727 41.667 0.00 0.00 37.66 2.29
536 569 5.659849 AGGCTGGAGGATCAAATCTAATT 57.340 39.130 0.00 0.00 36.25 1.40
548 581 1.742308 AAGTTGGTTAGGCTGGAGGA 58.258 50.000 0.00 0.00 0.00 3.71
584 617 6.650427 ACAGGTTAGATGATATGTTCGCTA 57.350 37.500 0.00 0.00 0.00 4.26
730 957 7.552459 AGTACAATAATTTACAAACATGGGGC 58.448 34.615 0.00 0.00 0.00 5.80
785 1012 7.510549 TTCTGGATAGCTGGCATAAAAATAC 57.489 36.000 0.00 0.00 0.00 1.89
826 1053 5.477984 AGCATAGCAAGATGAACTCCAAAAA 59.522 36.000 0.00 0.00 0.00 1.94
1196 1426 5.714333 TGAGCATCATATCCTAGAGAGTTCC 59.286 44.000 0.00 0.00 42.56 3.62
1247 1477 5.310451 ACGGGTACTGAAGAAATTTTGCTA 58.690 37.500 0.00 0.00 38.67 3.49
1280 1510 7.715657 AGAGCAACATGTTAGAAATGTTCAAA 58.284 30.769 11.53 0.00 44.43 2.69
1335 1566 4.874396 GTCAGGGGTAGCATAGTAAACAAC 59.126 45.833 0.00 0.00 0.00 3.32
1336 1567 4.532916 TGTCAGGGGTAGCATAGTAAACAA 59.467 41.667 0.00 0.00 0.00 2.83
1413 1644 5.314718 TGTGGCAGATAAGATCCATCAAT 57.685 39.130 7.46 0.00 0.00 2.57
1592 1823 4.142622 ACATGATTTGTGGATGTTACAGCG 60.143 41.667 0.00 0.00 37.11 5.18
1658 1889 2.027653 TGATTGTACAGGCGGATTCACA 60.028 45.455 0.00 0.00 0.00 3.58
1788 2019 5.340027 CCTGTGGGGTATGAAGAGGTTTAAT 60.340 44.000 0.00 0.00 0.00 1.40
1899 2131 8.404000 TCTTAACAAAACAAAATACGCCTTACA 58.596 29.630 0.00 0.00 0.00 2.41
1918 2150 5.781210 TTGGTCAAATGCATGTCTTAACA 57.219 34.783 0.00 0.00 40.38 2.41
2008 2240 7.651304 TGACACAAAATCACCATCATAACAAAC 59.349 33.333 0.00 0.00 0.00 2.93
2058 2290 5.938438 AGACAAGACTTTGAGCAAGAATC 57.062 39.130 0.00 0.00 37.73 2.52
2138 2371 6.346096 AGTAGCTTCAACTCAACAAACAGTA 58.654 36.000 0.00 0.00 0.00 2.74
2319 2552 6.479972 AAAGATATATTCAGACGTGGTGGA 57.520 37.500 0.00 0.00 0.00 4.02
2418 2651 2.211806 TGCCTTGCAACATTGAAAAGC 58.788 42.857 0.00 0.00 34.76 3.51
2735 2984 9.913451 CATGAGAAAAGAAATAATCGACTTCTC 57.087 33.333 0.00 0.00 39.62 2.87
2805 3054 0.374758 CATTTGTCGGTGCCTGATCG 59.625 55.000 0.00 0.00 0.00 3.69
2817 3066 1.336240 GGCCTGTCAAGCACATTTGTC 60.336 52.381 0.00 0.00 33.23 3.18
3052 3301 5.016173 CCCATCTAAGTTCCCAACAATCAA 58.984 41.667 0.00 0.00 0.00 2.57
3068 3317 7.235606 CAGGTCTTATAAGGATTGTCCCATCTA 59.764 40.741 12.54 0.00 37.19 1.98
3119 3368 3.737559 TTGCATAGGGATTGTCCACTT 57.262 42.857 0.00 0.00 38.64 3.16
3660 3909 5.477984 ACCACACGGAAACTAGTATTCACTA 59.522 40.000 15.21 0.00 34.38 2.74
3714 3963 5.365025 ACATGTATGCTCAGAACTAGACCAT 59.635 40.000 0.00 0.00 0.00 3.55
3794 4043 3.126831 GAGCACAGATATTCCAGGAACG 58.873 50.000 3.18 0.00 0.00 3.95
4160 4409 3.265791 AGTTGAAGATCTAGGCGCTTTG 58.734 45.455 7.64 0.00 0.00 2.77
4306 4555 9.831737 CAATTGCATAGCTAATATTAACTCCAC 57.168 33.333 0.00 0.00 0.00 4.02
4307 4556 9.573166 ACAATTGCATAGCTAATATTAACTCCA 57.427 29.630 5.05 0.00 0.00 3.86
4324 4573 2.429610 GCCTCCAATCTGACAATTGCAT 59.570 45.455 5.05 0.00 35.68 3.96
4325 4574 1.820519 GCCTCCAATCTGACAATTGCA 59.179 47.619 5.05 3.92 35.68 4.08
4349 4598 4.650985 TCGCAACAATTGAATCATCTTCG 58.349 39.130 13.59 2.74 0.00 3.79
4405 4654 3.709141 GGGACTCTTATCTTCAGCCTTCT 59.291 47.826 0.00 0.00 0.00 2.85
4611 4864 7.239763 TCATCCTTCCTTCCCAAAATAAAAC 57.760 36.000 0.00 0.00 0.00 2.43
4612 4865 7.291182 TGTTCATCCTTCCTTCCCAAAATAAAA 59.709 33.333 0.00 0.00 0.00 1.52
4613 4866 6.784969 TGTTCATCCTTCCTTCCCAAAATAAA 59.215 34.615 0.00 0.00 0.00 1.40
4623 4876 3.950395 CCTTCCATGTTCATCCTTCCTTC 59.050 47.826 0.00 0.00 0.00 3.46
4754 5017 2.034879 AGGCGACACCAAAGCATCG 61.035 57.895 0.00 0.00 43.14 3.84
4778 5041 2.226896 CCGATCAAGAGCTCACGCG 61.227 63.158 17.77 3.53 42.32 6.01
4851 5114 2.817396 GGAGCGCAGAGGAAGCAC 60.817 66.667 11.47 0.00 0.00 4.40
4859 5122 3.473647 CAGGGATGGGAGCGCAGA 61.474 66.667 11.47 0.00 0.00 4.26
4925 5188 2.256461 GAAACTTGCTGGCGCCTG 59.744 61.111 29.70 28.47 34.43 4.85
4936 5199 4.693566 TTCAAACAGTGACGAGTGAAACTT 59.306 37.500 0.00 0.00 42.12 2.66
4978 5241 8.554528 CATCTCTGTTTACTATTTGCATCGATT 58.445 33.333 0.00 0.00 0.00 3.34
5074 5337 0.179150 GAGCGTCCTGAGCACTGTAG 60.179 60.000 0.00 0.00 37.01 2.74
5093 5356 0.756815 GCATTGGGAGGGGGCTTAAG 60.757 60.000 0.00 0.00 0.00 1.85
5094 5357 1.221213 AGCATTGGGAGGGGGCTTAA 61.221 55.000 0.00 0.00 0.00 1.85
5096 5359 2.520657 GAAGCATTGGGAGGGGGCTT 62.521 60.000 0.00 0.00 46.55 4.35
5098 5361 2.442830 GAAGCATTGGGAGGGGGC 60.443 66.667 0.00 0.00 0.00 5.80
5099 5362 0.468771 GATGAAGCATTGGGAGGGGG 60.469 60.000 0.00 0.00 0.00 5.40
5100 5363 0.554792 AGATGAAGCATTGGGAGGGG 59.445 55.000 0.00 0.00 0.00 4.79
5101 5364 2.029623 CAAGATGAAGCATTGGGAGGG 58.970 52.381 0.00 0.00 0.00 4.30
5102 5365 2.731572 ACAAGATGAAGCATTGGGAGG 58.268 47.619 0.00 0.00 0.00 4.30
5103 5366 4.264253 TGTACAAGATGAAGCATTGGGAG 58.736 43.478 0.00 0.00 0.00 4.30
5104 5367 4.299586 TGTACAAGATGAAGCATTGGGA 57.700 40.909 0.00 0.00 0.00 4.37
5105 5368 4.460382 ACTTGTACAAGATGAAGCATTGGG 59.540 41.667 36.14 10.78 40.79 4.12
5106 5369 5.396484 CACTTGTACAAGATGAAGCATTGG 58.604 41.667 36.14 11.19 40.79 3.16
5107 5370 4.855388 GCACTTGTACAAGATGAAGCATTG 59.145 41.667 36.14 22.58 40.79 2.82
5108 5371 4.763793 AGCACTTGTACAAGATGAAGCATT 59.236 37.500 36.14 12.43 40.79 3.56
5109 5372 4.330250 AGCACTTGTACAAGATGAAGCAT 58.670 39.130 36.14 13.11 40.79 3.79
5110 5373 3.743521 AGCACTTGTACAAGATGAAGCA 58.256 40.909 36.14 0.06 40.79 3.91
5111 5374 5.672321 GCTTAGCACTTGTACAAGATGAAGC 60.672 44.000 36.14 32.37 40.79 3.86
5112 5375 5.163814 GGCTTAGCACTTGTACAAGATGAAG 60.164 44.000 36.14 28.79 40.79 3.02
5113 5376 4.695455 GGCTTAGCACTTGTACAAGATGAA 59.305 41.667 36.14 22.68 40.79 2.57
5114 5377 4.020218 AGGCTTAGCACTTGTACAAGATGA 60.020 41.667 36.14 19.00 40.79 2.92
5115 5378 4.256920 AGGCTTAGCACTTGTACAAGATG 58.743 43.478 36.14 28.55 40.79 2.90
5116 5379 4.559862 AGGCTTAGCACTTGTACAAGAT 57.440 40.909 36.14 23.95 40.79 2.40
5117 5380 4.040461 AGAAGGCTTAGCACTTGTACAAGA 59.960 41.667 36.14 15.56 40.79 3.02
5118 5381 4.319177 AGAAGGCTTAGCACTTGTACAAG 58.681 43.478 29.76 29.76 43.79 3.16
5119 5382 4.351874 AGAAGGCTTAGCACTTGTACAA 57.648 40.909 8.28 8.28 0.00 2.41
5120 5383 5.046591 ACATAGAAGGCTTAGCACTTGTACA 60.047 40.000 6.53 0.00 0.00 2.90
5121 5384 5.420409 ACATAGAAGGCTTAGCACTTGTAC 58.580 41.667 6.53 0.00 0.00 2.90
5122 5385 5.677319 ACATAGAAGGCTTAGCACTTGTA 57.323 39.130 6.53 10.10 0.00 2.41
5123 5386 4.559862 ACATAGAAGGCTTAGCACTTGT 57.440 40.909 6.53 8.24 0.00 3.16
5124 5387 5.049818 GCATACATAGAAGGCTTAGCACTTG 60.050 44.000 6.53 6.33 0.00 3.16
5125 5388 5.059833 GCATACATAGAAGGCTTAGCACTT 58.940 41.667 6.53 7.09 0.00 3.16
5126 5389 4.101585 TGCATACATAGAAGGCTTAGCACT 59.898 41.667 6.53 4.88 0.00 4.40
5127 5390 4.380531 TGCATACATAGAAGGCTTAGCAC 58.619 43.478 6.53 0.00 0.00 4.40
5128 5391 4.687901 TGCATACATAGAAGGCTTAGCA 57.312 40.909 6.53 0.00 0.00 3.49
5129 5392 6.377327 TTTTGCATACATAGAAGGCTTAGC 57.623 37.500 0.00 0.00 0.00 3.09
5150 5413 3.165071 GGGGTCACCACATCAGATTTTT 58.835 45.455 0.00 0.00 39.85 1.94
5151 5414 2.109834 TGGGGTCACCACATCAGATTTT 59.890 45.455 0.00 0.00 46.80 1.82
5152 5415 1.710244 TGGGGTCACCACATCAGATTT 59.290 47.619 0.00 0.00 46.80 2.17
5153 5416 1.283029 CTGGGGTCACCACATCAGATT 59.717 52.381 0.00 0.00 46.80 2.40
5154 5417 0.914644 CTGGGGTCACCACATCAGAT 59.085 55.000 0.00 0.00 46.80 2.90
5155 5418 0.473694 ACTGGGGTCACCACATCAGA 60.474 55.000 0.00 0.00 46.80 3.27
5156 5419 1.275666 TACTGGGGTCACCACATCAG 58.724 55.000 0.00 1.43 46.80 2.90
5157 5420 1.735926 TTACTGGGGTCACCACATCA 58.264 50.000 0.00 0.00 46.80 3.07
5158 5421 2.871096 TTTACTGGGGTCACCACATC 57.129 50.000 0.00 0.00 46.80 3.06
5159 5422 3.603965 TTTTTACTGGGGTCACCACAT 57.396 42.857 0.00 0.00 46.80 3.21
5176 5439 4.300189 TCACGTGCTTAGCATTGTTTTT 57.700 36.364 11.03 0.00 41.91 1.94
5177 5440 3.980646 TCACGTGCTTAGCATTGTTTT 57.019 38.095 11.03 0.00 41.91 2.43
5178 5441 3.550030 GGTTCACGTGCTTAGCATTGTTT 60.550 43.478 11.03 0.00 41.91 2.83
5179 5442 2.031157 GGTTCACGTGCTTAGCATTGTT 60.031 45.455 11.03 0.00 41.91 2.83
5180 5443 1.535462 GGTTCACGTGCTTAGCATTGT 59.465 47.619 11.03 9.73 41.91 2.71
5181 5444 1.806542 AGGTTCACGTGCTTAGCATTG 59.193 47.619 11.03 11.13 41.91 2.82
5182 5445 2.185004 AGGTTCACGTGCTTAGCATT 57.815 45.000 11.03 0.00 41.91 3.56
5183 5446 2.233922 ACTAGGTTCACGTGCTTAGCAT 59.766 45.455 11.03 0.00 41.91 3.79
5184 5447 1.616865 ACTAGGTTCACGTGCTTAGCA 59.383 47.619 11.67 1.39 35.60 3.49
5185 5448 2.260481 GACTAGGTTCACGTGCTTAGC 58.740 52.381 11.67 8.36 0.00 3.09
5186 5449 3.570926 TGACTAGGTTCACGTGCTTAG 57.429 47.619 11.67 10.43 0.00 2.18
5187 5450 4.325028 TTTGACTAGGTTCACGTGCTTA 57.675 40.909 11.67 0.00 0.00 3.09
5188 5451 2.902705 TTGACTAGGTTCACGTGCTT 57.097 45.000 11.67 0.00 0.00 3.91
5189 5452 2.902705 TTTGACTAGGTTCACGTGCT 57.097 45.000 11.67 4.94 0.00 4.40
5190 5453 5.796350 ATATTTTGACTAGGTTCACGTGC 57.204 39.130 11.67 0.00 0.00 5.34
5191 5454 9.755064 CTTAAATATTTTGACTAGGTTCACGTG 57.245 33.333 9.94 9.94 0.00 4.49
5192 5455 8.943002 CCTTAAATATTTTGACTAGGTTCACGT 58.057 33.333 5.91 0.00 0.00 4.49
5193 5456 9.158233 TCCTTAAATATTTTGACTAGGTTCACG 57.842 33.333 5.91 0.00 0.00 4.35
5202 5465 9.244292 GGACTTCCTTCCTTAAATATTTTGACT 57.756 33.333 5.91 0.00 32.24 3.41
5203 5466 9.020731 TGGACTTCCTTCCTTAAATATTTTGAC 57.979 33.333 5.91 0.00 36.51 3.18
5204 5467 9.020731 GTGGACTTCCTTCCTTAAATATTTTGA 57.979 33.333 5.91 0.00 36.51 2.69
5205 5468 8.251026 GGTGGACTTCCTTCCTTAAATATTTTG 58.749 37.037 5.91 0.34 36.51 2.44
5206 5469 7.953493 TGGTGGACTTCCTTCCTTAAATATTTT 59.047 33.333 5.91 0.00 36.51 1.82
5207 5470 7.475299 TGGTGGACTTCCTTCCTTAAATATTT 58.525 34.615 5.89 5.89 36.51 1.40
5208 5471 7.039722 TGGTGGACTTCCTTCCTTAAATATT 57.960 36.000 10.06 0.00 36.51 1.28
5209 5472 6.217693 ACTGGTGGACTTCCTTCCTTAAATAT 59.782 38.462 10.06 0.00 36.51 1.28
5210 5473 5.550403 ACTGGTGGACTTCCTTCCTTAAATA 59.450 40.000 10.06 0.00 36.51 1.40
5211 5474 4.354087 ACTGGTGGACTTCCTTCCTTAAAT 59.646 41.667 10.06 0.00 36.51 1.40
5212 5475 3.720002 ACTGGTGGACTTCCTTCCTTAAA 59.280 43.478 10.06 0.00 36.51 1.52
5213 5476 3.323775 ACTGGTGGACTTCCTTCCTTAA 58.676 45.455 10.06 0.00 36.51 1.85
5214 5477 2.986050 ACTGGTGGACTTCCTTCCTTA 58.014 47.619 10.06 0.00 36.51 2.69
5215 5478 1.821088 ACTGGTGGACTTCCTTCCTT 58.179 50.000 10.06 0.00 36.51 3.36
5216 5479 2.258109 GTACTGGTGGACTTCCTTCCT 58.742 52.381 10.06 0.00 36.51 3.36
5217 5480 1.975680 TGTACTGGTGGACTTCCTTCC 59.024 52.381 0.00 0.53 36.82 3.46
5218 5481 3.260884 TCATGTACTGGTGGACTTCCTTC 59.739 47.826 0.00 0.00 36.82 3.46
5219 5482 3.248024 TCATGTACTGGTGGACTTCCTT 58.752 45.455 0.00 0.00 36.82 3.36
5220 5483 2.902608 TCATGTACTGGTGGACTTCCT 58.097 47.619 0.00 0.00 36.82 3.36
5221 5484 3.260884 TCTTCATGTACTGGTGGACTTCC 59.739 47.826 0.00 0.00 0.00 3.46
5222 5485 4.499183 CTCTTCATGTACTGGTGGACTTC 58.501 47.826 0.00 0.00 0.00 3.01
5223 5486 3.307059 GCTCTTCATGTACTGGTGGACTT 60.307 47.826 0.00 0.00 0.00 3.01
5224 5487 2.234908 GCTCTTCATGTACTGGTGGACT 59.765 50.000 0.00 0.00 0.00 3.85
5225 5488 2.234908 AGCTCTTCATGTACTGGTGGAC 59.765 50.000 0.00 0.00 0.00 4.02
5226 5489 2.497675 GAGCTCTTCATGTACTGGTGGA 59.502 50.000 6.43 0.00 0.00 4.02
5227 5490 2.499289 AGAGCTCTTCATGTACTGGTGG 59.501 50.000 11.45 0.00 0.00 4.61
5228 5491 3.883830 AGAGCTCTTCATGTACTGGTG 57.116 47.619 11.45 0.00 0.00 4.17
5229 5492 4.605183 ACTAGAGCTCTTCATGTACTGGT 58.395 43.478 23.84 0.00 0.00 4.00
5230 5493 5.347342 CAACTAGAGCTCTTCATGTACTGG 58.653 45.833 23.84 0.00 0.00 4.00
5231 5494 4.803088 GCAACTAGAGCTCTTCATGTACTG 59.197 45.833 23.84 12.30 0.00 2.74
5232 5495 4.709397 AGCAACTAGAGCTCTTCATGTACT 59.291 41.667 23.84 13.07 38.01 2.73
5233 5496 5.004922 AGCAACTAGAGCTCTTCATGTAC 57.995 43.478 23.84 11.30 38.01 2.90
5234 5497 6.775594 TTAGCAACTAGAGCTCTTCATGTA 57.224 37.500 23.84 0.77 42.32 2.29
5235 5498 5.667539 TTAGCAACTAGAGCTCTTCATGT 57.332 39.130 23.84 12.90 42.32 3.21
5236 5499 6.760298 TGATTTAGCAACTAGAGCTCTTCATG 59.240 38.462 23.84 18.07 42.32 3.07
5237 5500 6.882656 TGATTTAGCAACTAGAGCTCTTCAT 58.117 36.000 23.84 4.80 42.32 2.57
5238 5501 6.286240 TGATTTAGCAACTAGAGCTCTTCA 57.714 37.500 23.84 12.29 42.32 3.02
5239 5502 7.784633 AATGATTTAGCAACTAGAGCTCTTC 57.215 36.000 23.84 9.62 42.32 2.87
5240 5503 9.672673 TTTAATGATTTAGCAACTAGAGCTCTT 57.327 29.630 23.84 4.90 42.32 2.85
5241 5504 9.103861 GTTTAATGATTTAGCAACTAGAGCTCT 57.896 33.333 22.17 22.17 42.32 4.09
5242 5505 8.058915 CGTTTAATGATTTAGCAACTAGAGCTC 58.941 37.037 15.74 5.27 42.32 4.09
5243 5506 7.764443 TCGTTTAATGATTTAGCAACTAGAGCT 59.236 33.333 16.34 16.34 45.77 4.09
5244 5507 7.906160 TCGTTTAATGATTTAGCAACTAGAGC 58.094 34.615 0.00 0.00 0.00 4.09
5245 5508 9.907576 CTTCGTTTAATGATTTAGCAACTAGAG 57.092 33.333 0.00 0.00 0.00 2.43
5246 5509 8.388103 GCTTCGTTTAATGATTTAGCAACTAGA 58.612 33.333 0.00 0.00 0.00 2.43
5247 5510 8.175069 TGCTTCGTTTAATGATTTAGCAACTAG 58.825 33.333 8.93 0.00 34.76 2.57
5248 5511 8.035165 TGCTTCGTTTAATGATTTAGCAACTA 57.965 30.769 8.93 0.00 34.76 2.24
5249 5512 6.908825 TGCTTCGTTTAATGATTTAGCAACT 58.091 32.000 8.93 0.00 34.76 3.16
5250 5513 7.561237 TTGCTTCGTTTAATGATTTAGCAAC 57.439 32.000 16.25 0.00 41.03 4.17
5251 5514 6.307800 GCTTGCTTCGTTTAATGATTTAGCAA 59.692 34.615 18.08 18.08 42.91 3.91
5252 5515 5.799936 GCTTGCTTCGTTTAATGATTTAGCA 59.200 36.000 7.66 7.66 35.77 3.49
5253 5516 6.030228 AGCTTGCTTCGTTTAATGATTTAGC 58.970 36.000 3.21 3.21 0.00 3.09
5254 5517 9.214953 CTAAGCTTGCTTCGTTTAATGATTTAG 57.785 33.333 9.86 0.00 0.00 1.85
5255 5518 7.696453 GCTAAGCTTGCTTCGTTTAATGATTTA 59.304 33.333 9.86 0.00 0.00 1.40
5256 5519 6.528072 GCTAAGCTTGCTTCGTTTAATGATTT 59.472 34.615 9.86 0.00 0.00 2.17
5257 5520 6.030228 GCTAAGCTTGCTTCGTTTAATGATT 58.970 36.000 9.86 0.00 0.00 2.57
5258 5521 5.123820 TGCTAAGCTTGCTTCGTTTAATGAT 59.876 36.000 9.86 0.00 0.00 2.45
5259 5522 4.454161 TGCTAAGCTTGCTTCGTTTAATGA 59.546 37.500 9.86 0.00 0.00 2.57
5260 5523 4.722194 TGCTAAGCTTGCTTCGTTTAATG 58.278 39.130 9.86 0.00 0.00 1.90
5261 5524 5.154222 GTTGCTAAGCTTGCTTCGTTTAAT 58.846 37.500 9.86 0.00 0.00 1.40
5262 5525 4.533222 GTTGCTAAGCTTGCTTCGTTTAA 58.467 39.130 9.86 1.36 0.00 1.52
5263 5526 3.058501 GGTTGCTAAGCTTGCTTCGTTTA 60.059 43.478 9.86 0.00 0.00 2.01
5264 5527 2.287608 GGTTGCTAAGCTTGCTTCGTTT 60.288 45.455 9.86 0.00 0.00 3.60
5265 5528 1.266989 GGTTGCTAAGCTTGCTTCGTT 59.733 47.619 9.86 0.00 0.00 3.85
5266 5529 0.875059 GGTTGCTAAGCTTGCTTCGT 59.125 50.000 9.86 0.00 0.00 3.85
5267 5530 0.874390 TGGTTGCTAAGCTTGCTTCG 59.126 50.000 9.86 6.82 0.00 3.79
5268 5531 4.396166 TCTTATGGTTGCTAAGCTTGCTTC 59.604 41.667 9.86 7.94 0.00 3.86
5269 5532 4.156739 GTCTTATGGTTGCTAAGCTTGCTT 59.843 41.667 9.86 12.65 0.00 3.91
5270 5533 3.691609 GTCTTATGGTTGCTAAGCTTGCT 59.308 43.478 9.86 0.00 0.00 3.91
5271 5534 3.691609 AGTCTTATGGTTGCTAAGCTTGC 59.308 43.478 9.86 11.34 0.00 4.01
5272 5535 5.007136 GCTAGTCTTATGGTTGCTAAGCTTG 59.993 44.000 9.86 0.01 0.00 4.01
5273 5536 5.119694 GCTAGTCTTATGGTTGCTAAGCTT 58.880 41.667 3.48 3.48 0.00 3.74
5274 5537 4.443598 GGCTAGTCTTATGGTTGCTAAGCT 60.444 45.833 0.00 0.00 0.00 3.74
5275 5538 3.810386 GGCTAGTCTTATGGTTGCTAAGC 59.190 47.826 0.00 0.00 0.00 3.09
5276 5539 4.811557 GTGGCTAGTCTTATGGTTGCTAAG 59.188 45.833 0.00 0.00 0.00 2.18
5277 5540 4.224147 TGTGGCTAGTCTTATGGTTGCTAA 59.776 41.667 0.00 0.00 0.00 3.09
5278 5541 3.772572 TGTGGCTAGTCTTATGGTTGCTA 59.227 43.478 0.00 0.00 0.00 3.49
5279 5542 2.571653 TGTGGCTAGTCTTATGGTTGCT 59.428 45.455 0.00 0.00 0.00 3.91
5280 5543 2.939103 CTGTGGCTAGTCTTATGGTTGC 59.061 50.000 0.00 0.00 0.00 4.17
5281 5544 3.935203 CACTGTGGCTAGTCTTATGGTTG 59.065 47.826 0.00 0.00 0.00 3.77
5282 5545 3.055094 CCACTGTGGCTAGTCTTATGGTT 60.055 47.826 14.87 0.00 0.00 3.67
5283 5546 2.501723 CCACTGTGGCTAGTCTTATGGT 59.498 50.000 14.87 0.00 0.00 3.55
5284 5547 2.158900 CCCACTGTGGCTAGTCTTATGG 60.159 54.545 21.47 0.00 35.79 2.74
5285 5548 2.766263 TCCCACTGTGGCTAGTCTTATG 59.234 50.000 21.47 3.81 35.79 1.90
5286 5549 3.034635 CTCCCACTGTGGCTAGTCTTAT 58.965 50.000 21.47 0.00 35.79 1.73
5287 5550 2.225293 ACTCCCACTGTGGCTAGTCTTA 60.225 50.000 21.47 0.00 35.79 2.10
5288 5551 1.270907 CTCCCACTGTGGCTAGTCTT 58.729 55.000 21.47 0.00 35.79 3.01
5289 5552 0.115349 ACTCCCACTGTGGCTAGTCT 59.885 55.000 21.47 3.44 35.79 3.24
5290 5553 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
5291 5554 1.900486 GTTACTCCCACTGTGGCTAGT 59.100 52.381 26.22 26.22 35.79 2.57
5292 5555 1.899814 TGTTACTCCCACTGTGGCTAG 59.100 52.381 21.47 20.51 35.79 3.42
5293 5556 2.018355 TGTTACTCCCACTGTGGCTA 57.982 50.000 21.47 10.31 35.79 3.93
5294 5557 1.136828 TTGTTACTCCCACTGTGGCT 58.863 50.000 21.47 8.08 35.79 4.75
5295 5558 1.235724 GTTGTTACTCCCACTGTGGC 58.764 55.000 21.47 7.10 35.79 5.01
5296 5559 2.631160 TGTTGTTACTCCCACTGTGG 57.369 50.000 20.01 20.01 37.25 4.17
5297 5560 2.736721 CGATGTTGTTACTCCCACTGTG 59.263 50.000 0.00 0.00 0.00 3.66
5298 5561 2.631062 TCGATGTTGTTACTCCCACTGT 59.369 45.455 0.00 0.00 0.00 3.55
5299 5562 3.254060 CTCGATGTTGTTACTCCCACTG 58.746 50.000 0.00 0.00 0.00 3.66
5300 5563 2.897969 ACTCGATGTTGTTACTCCCACT 59.102 45.455 0.00 0.00 0.00 4.00
5301 5564 3.251571 GACTCGATGTTGTTACTCCCAC 58.748 50.000 0.00 0.00 0.00 4.61
5302 5565 2.232941 GGACTCGATGTTGTTACTCCCA 59.767 50.000 0.00 0.00 0.00 4.37
5303 5566 2.232941 TGGACTCGATGTTGTTACTCCC 59.767 50.000 0.00 0.00 0.00 4.30
5304 5567 3.587797 TGGACTCGATGTTGTTACTCC 57.412 47.619 0.00 0.00 0.00 3.85
5305 5568 4.557205 AGTTGGACTCGATGTTGTTACTC 58.443 43.478 0.00 0.00 0.00 2.59
5306 5569 4.602340 AGTTGGACTCGATGTTGTTACT 57.398 40.909 0.00 0.00 0.00 2.24
5307 5570 5.163982 GCTTAGTTGGACTCGATGTTGTTAC 60.164 44.000 0.00 0.00 0.00 2.50
5308 5571 4.927425 GCTTAGTTGGACTCGATGTTGTTA 59.073 41.667 0.00 0.00 0.00 2.41
5309 5572 3.746492 GCTTAGTTGGACTCGATGTTGTT 59.254 43.478 0.00 0.00 0.00 2.83
5310 5573 3.244078 TGCTTAGTTGGACTCGATGTTGT 60.244 43.478 0.00 0.00 0.00 3.32
5311 5574 3.325870 TGCTTAGTTGGACTCGATGTTG 58.674 45.455 0.00 0.00 0.00 3.33
5312 5575 3.678056 TGCTTAGTTGGACTCGATGTT 57.322 42.857 0.00 0.00 0.00 2.71
5313 5576 3.678056 TTGCTTAGTTGGACTCGATGT 57.322 42.857 0.00 0.00 0.00 3.06
5314 5577 5.551760 AATTTGCTTAGTTGGACTCGATG 57.448 39.130 0.00 0.00 0.00 3.84
5315 5578 5.942872 CAAATTTGCTTAGTTGGACTCGAT 58.057 37.500 5.01 0.00 0.00 3.59
5316 5579 5.356882 CAAATTTGCTTAGTTGGACTCGA 57.643 39.130 5.01 0.00 0.00 4.04
5337 5600 7.175467 CCTCATTAACTCATTGCCATATAAGCA 59.825 37.037 0.00 0.00 38.81 3.91
5338 5601 7.391554 TCCTCATTAACTCATTGCCATATAAGC 59.608 37.037 0.00 0.00 0.00 3.09
5339 5602 8.853077 TCCTCATTAACTCATTGCCATATAAG 57.147 34.615 0.00 0.00 0.00 1.73
5340 5603 8.659527 TCTCCTCATTAACTCATTGCCATATAA 58.340 33.333 0.00 0.00 0.00 0.98
5341 5604 8.206126 TCTCCTCATTAACTCATTGCCATATA 57.794 34.615 0.00 0.00 0.00 0.86
5342 5605 7.083062 TCTCCTCATTAACTCATTGCCATAT 57.917 36.000 0.00 0.00 0.00 1.78
5343 5606 6.464892 CCTCTCCTCATTAACTCATTGCCATA 60.465 42.308 0.00 0.00 0.00 2.74
5344 5607 5.374921 CTCTCCTCATTAACTCATTGCCAT 58.625 41.667 0.00 0.00 0.00 4.40
5345 5608 4.384537 CCTCTCCTCATTAACTCATTGCCA 60.385 45.833 0.00 0.00 0.00 4.92
5346 5609 4.133078 CCTCTCCTCATTAACTCATTGCC 58.867 47.826 0.00 0.00 0.00 4.52
5347 5610 4.775236 ACCTCTCCTCATTAACTCATTGC 58.225 43.478 0.00 0.00 0.00 3.56
5348 5611 7.118496 ACTACCTCTCCTCATTAACTCATTG 57.882 40.000 0.00 0.00 0.00 2.82
5349 5612 7.741554 AACTACCTCTCCTCATTAACTCATT 57.258 36.000 0.00 0.00 0.00 2.57
5350 5613 7.400339 TCAAACTACCTCTCCTCATTAACTCAT 59.600 37.037 0.00 0.00 0.00 2.90
5351 5614 6.724441 TCAAACTACCTCTCCTCATTAACTCA 59.276 38.462 0.00 0.00 0.00 3.41
5352 5615 7.093684 ACTCAAACTACCTCTCCTCATTAACTC 60.094 40.741 0.00 0.00 0.00 3.01
5353 5616 6.726764 ACTCAAACTACCTCTCCTCATTAACT 59.273 38.462 0.00 0.00 0.00 2.24
5354 5617 6.937392 ACTCAAACTACCTCTCCTCATTAAC 58.063 40.000 0.00 0.00 0.00 2.01
5355 5618 8.529476 GTTACTCAAACTACCTCTCCTCATTAA 58.471 37.037 0.00 0.00 35.05 1.40
5356 5619 7.894364 AGTTACTCAAACTACCTCTCCTCATTA 59.106 37.037 0.00 0.00 46.85 1.90
5357 5620 6.726764 AGTTACTCAAACTACCTCTCCTCATT 59.273 38.462 0.00 0.00 46.85 2.57
5358 5621 6.257586 AGTTACTCAAACTACCTCTCCTCAT 58.742 40.000 0.00 0.00 46.85 2.90
5359 5622 5.642165 AGTTACTCAAACTACCTCTCCTCA 58.358 41.667 0.00 0.00 46.85 3.86
5378 5641 8.184192 GTGATGTTACCGTAACTAGCTAAGTTA 58.816 37.037 19.65 10.09 46.85 2.24
5380 5643 6.151648 TGTGATGTTACCGTAACTAGCTAAGT 59.848 38.462 19.65 0.00 41.49 2.24
5381 5644 6.558009 TGTGATGTTACCGTAACTAGCTAAG 58.442 40.000 19.65 0.00 39.38 2.18
5382 5645 6.513806 TGTGATGTTACCGTAACTAGCTAA 57.486 37.500 19.65 1.91 39.38 3.09
5383 5646 6.095860 ACATGTGATGTTACCGTAACTAGCTA 59.904 38.462 19.65 0.00 41.63 3.32
5384 5647 5.105473 ACATGTGATGTTACCGTAACTAGCT 60.105 40.000 19.65 0.00 41.63 3.32
5385 5648 5.107133 ACATGTGATGTTACCGTAACTAGC 58.893 41.667 19.65 10.99 41.63 3.42
5386 5649 5.747197 GGACATGTGATGTTACCGTAACTAG 59.253 44.000 19.65 6.79 45.03 2.57
5387 5650 5.394443 GGGACATGTGATGTTACCGTAACTA 60.394 44.000 19.65 8.85 45.03 2.24
5388 5651 4.501071 GGACATGTGATGTTACCGTAACT 58.499 43.478 19.65 7.74 45.03 2.24
5389 5652 3.619929 GGGACATGTGATGTTACCGTAAC 59.380 47.826 13.58 13.58 45.03 2.50
5390 5653 3.261137 TGGGACATGTGATGTTACCGTAA 59.739 43.478 1.15 0.00 45.03 3.18
5391 5654 2.832733 TGGGACATGTGATGTTACCGTA 59.167 45.455 1.15 0.00 45.03 4.02
5392 5655 1.626321 TGGGACATGTGATGTTACCGT 59.374 47.619 1.15 0.00 45.03 4.83
5393 5656 2.394930 TGGGACATGTGATGTTACCG 57.605 50.000 1.15 0.00 45.03 4.02
5394 5657 3.181487 GCATTGGGACATGTGATGTTACC 60.181 47.826 1.15 0.00 45.03 2.85
5395 5658 3.443329 TGCATTGGGACATGTGATGTTAC 59.557 43.478 1.15 0.00 45.03 2.50
5396 5659 3.694926 TGCATTGGGACATGTGATGTTA 58.305 40.909 1.15 0.00 45.03 2.41
5397 5660 2.527497 TGCATTGGGACATGTGATGTT 58.473 42.857 1.15 0.00 45.03 2.71
5399 5662 3.812156 AATGCATTGGGACATGTGATG 57.188 42.857 12.09 3.48 39.30 3.07
5400 5663 5.141910 TCATAATGCATTGGGACATGTGAT 58.858 37.500 22.27 0.11 39.30 3.06
5401 5664 4.534797 TCATAATGCATTGGGACATGTGA 58.465 39.130 22.27 4.97 39.30 3.58
5402 5665 4.340097 ACTCATAATGCATTGGGACATGTG 59.660 41.667 22.27 17.79 39.30 3.21
5403 5666 4.539726 ACTCATAATGCATTGGGACATGT 58.460 39.130 22.27 0.00 39.30 3.21
5404 5667 4.825634 AGACTCATAATGCATTGGGACATG 59.174 41.667 22.27 16.09 39.30 3.21
5405 5668 5.057843 AGACTCATAATGCATTGGGACAT 57.942 39.130 22.27 3.94 39.30 3.06
5406 5669 4.508551 AGACTCATAATGCATTGGGACA 57.491 40.909 22.27 1.31 0.00 4.02
5407 5670 7.119846 GGTTATAGACTCATAATGCATTGGGAC 59.880 40.741 22.27 7.38 0.00 4.46
5408 5671 7.017551 AGGTTATAGACTCATAATGCATTGGGA 59.982 37.037 22.27 16.60 0.00 4.37
5409 5672 7.170965 AGGTTATAGACTCATAATGCATTGGG 58.829 38.462 22.27 9.52 0.00 4.12
5410 5673 9.725019 TTAGGTTATAGACTCATAATGCATTGG 57.275 33.333 22.27 13.64 0.00 3.16
5425 5688 9.712305 GCAGAGCTTCATTTATTAGGTTATAGA 57.288 33.333 0.00 0.00 0.00 1.98
5426 5689 9.494271 TGCAGAGCTTCATTTATTAGGTTATAG 57.506 33.333 0.00 0.00 0.00 1.31
5428 5691 8.790718 CATGCAGAGCTTCATTTATTAGGTTAT 58.209 33.333 0.00 0.00 0.00 1.89
5429 5692 7.992608 TCATGCAGAGCTTCATTTATTAGGTTA 59.007 33.333 0.00 0.00 0.00 2.85
5430 5693 6.830324 TCATGCAGAGCTTCATTTATTAGGTT 59.170 34.615 0.00 0.00 0.00 3.50
5431 5694 6.261826 GTCATGCAGAGCTTCATTTATTAGGT 59.738 38.462 0.00 0.00 0.00 3.08
5432 5695 6.261603 TGTCATGCAGAGCTTCATTTATTAGG 59.738 38.462 0.00 0.00 0.00 2.69
5433 5696 7.130917 GTGTCATGCAGAGCTTCATTTATTAG 58.869 38.462 0.00 0.00 0.00 1.73
5434 5697 6.038603 GGTGTCATGCAGAGCTTCATTTATTA 59.961 38.462 0.00 0.00 0.00 0.98
5435 5698 5.163581 GGTGTCATGCAGAGCTTCATTTATT 60.164 40.000 0.00 0.00 0.00 1.40
5436 5699 4.337555 GGTGTCATGCAGAGCTTCATTTAT 59.662 41.667 0.00 0.00 0.00 1.40
5437 5700 3.691118 GGTGTCATGCAGAGCTTCATTTA 59.309 43.478 0.00 0.00 0.00 1.40
5438 5701 2.490903 GGTGTCATGCAGAGCTTCATTT 59.509 45.455 0.00 0.00 0.00 2.32
5439 5702 2.089980 GGTGTCATGCAGAGCTTCATT 58.910 47.619 0.00 0.00 0.00 2.57
5440 5703 1.003928 TGGTGTCATGCAGAGCTTCAT 59.996 47.619 0.00 0.00 0.00 2.57
5441 5704 0.397564 TGGTGTCATGCAGAGCTTCA 59.602 50.000 0.00 0.00 0.00 3.02
5442 5705 0.801251 GTGGTGTCATGCAGAGCTTC 59.199 55.000 0.00 0.00 0.00 3.86
5443 5706 0.109153 TGTGGTGTCATGCAGAGCTT 59.891 50.000 0.00 0.00 0.00 3.74
5444 5707 0.604780 GTGTGGTGTCATGCAGAGCT 60.605 55.000 0.00 0.00 0.00 4.09
5445 5708 0.604780 AGTGTGGTGTCATGCAGAGC 60.605 55.000 0.00 0.00 0.00 4.09
5446 5709 1.888215 AAGTGTGGTGTCATGCAGAG 58.112 50.000 0.00 0.00 0.00 3.35
5447 5710 2.368548 ACTAAGTGTGGTGTCATGCAGA 59.631 45.455 0.00 0.00 0.00 4.26
5448 5711 2.481568 CACTAAGTGTGGTGTCATGCAG 59.518 50.000 0.00 0.00 42.68 4.41
5449 5712 2.103941 TCACTAAGTGTGGTGTCATGCA 59.896 45.455 0.00 0.00 46.20 3.96
5450 5713 2.738846 CTCACTAAGTGTGGTGTCATGC 59.261 50.000 0.00 0.00 46.20 4.06
5451 5714 3.995199 ACTCACTAAGTGTGGTGTCATG 58.005 45.455 0.00 0.00 46.20 3.07
5452 5715 5.069914 TGTTACTCACTAAGTGTGGTGTCAT 59.930 40.000 0.00 0.00 46.20 3.06
5453 5716 4.403113 TGTTACTCACTAAGTGTGGTGTCA 59.597 41.667 0.00 0.00 46.20 3.58
5454 5717 4.940463 TGTTACTCACTAAGTGTGGTGTC 58.060 43.478 0.00 0.00 46.20 3.67
5455 5718 5.546621 ATGTTACTCACTAAGTGTGGTGT 57.453 39.130 0.00 6.17 46.20 4.16
5456 5719 6.365247 GTGTATGTTACTCACTAAGTGTGGTG 59.635 42.308 0.00 0.00 46.20 4.17
5457 5720 6.267014 AGTGTATGTTACTCACTAAGTGTGGT 59.733 38.462 0.00 0.00 46.20 4.16
5458 5721 6.688578 AGTGTATGTTACTCACTAAGTGTGG 58.311 40.000 0.00 0.00 46.20 4.17
5460 5723 8.632906 ACTAGTGTATGTTACTCACTAAGTGT 57.367 34.615 0.00 7.89 41.84 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.