Multiple sequence alignment - TraesCS3B01G230300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G230300 chr3B 100.000 3450 0 0 1 3450 344281770 344278321 0.000000e+00 6372.0
1 TraesCS3B01G230300 chr1B 98.844 2854 18 7 612 3450 400295118 400297971 0.000000e+00 5073.0
2 TraesCS3B01G230300 chr1B 99.033 2792 23 2 663 3450 641515707 641512916 0.000000e+00 5003.0
3 TraesCS3B01G230300 chr3A 98.807 2849 24 2 612 3450 648036386 648033538 0.000000e+00 5064.0
4 TraesCS3B01G230300 chr3A 98.532 2861 19 9 612 3450 639500582 639497723 0.000000e+00 5029.0
5 TraesCS3B01G230300 chr3A 92.416 567 30 9 49 611 329528202 329528759 0.000000e+00 797.0
6 TraesCS3B01G230300 chr3A 95.833 48 2 0 1 48 329528174 329528221 1.030000e-10 78.7
7 TraesCS3B01G230300 chr5A 98.705 2857 19 5 612 3450 593169434 593166578 0.000000e+00 5055.0
8 TraesCS3B01G230300 chr5A 99.175 2789 18 3 666 3450 506137752 506134965 0.000000e+00 5018.0
9 TraesCS3B01G230300 chr2A 98.770 2846 27 5 611 3450 310415269 310412426 0.000000e+00 5055.0
10 TraesCS3B01G230300 chr2A 98.392 2861 24 3 612 3450 84594387 84591527 0.000000e+00 5009.0
11 TraesCS3B01G230300 chr2A 94.500 200 0 2 612 800 84589509 84589310 7.240000e-77 298.0
12 TraesCS3B01G230300 chr2A 90.732 205 1 1 612 798 310410241 310410037 1.230000e-64 257.0
13 TraesCS3B01G230300 chr7B 98.601 2859 20 8 612 3450 312341953 312339095 0.000000e+00 5040.0
14 TraesCS3B01G230300 chr7B 99.176 2792 18 3 663 3450 244398064 244400854 0.000000e+00 5024.0
15 TraesCS3B01G230300 chr3D 93.122 567 30 6 49 611 228171444 228170883 0.000000e+00 822.0
16 TraesCS3B01G230300 chr3D 100.000 32 0 0 1 32 228171472 228171441 3.720000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G230300 chr3B 344278321 344281770 3449 True 6372.00 6372 100.0000 1 3450 1 chr3B.!!$R1 3449
1 TraesCS3B01G230300 chr1B 400295118 400297971 2853 False 5073.00 5073 98.8440 612 3450 1 chr1B.!!$F1 2838
2 TraesCS3B01G230300 chr1B 641512916 641515707 2791 True 5003.00 5003 99.0330 663 3450 1 chr1B.!!$R1 2787
3 TraesCS3B01G230300 chr3A 648033538 648036386 2848 True 5064.00 5064 98.8070 612 3450 1 chr3A.!!$R2 2838
4 TraesCS3B01G230300 chr3A 639497723 639500582 2859 True 5029.00 5029 98.5320 612 3450 1 chr3A.!!$R1 2838
5 TraesCS3B01G230300 chr3A 329528174 329528759 585 False 437.85 797 94.1245 1 611 2 chr3A.!!$F1 610
6 TraesCS3B01G230300 chr5A 593166578 593169434 2856 True 5055.00 5055 98.7050 612 3450 1 chr5A.!!$R2 2838
7 TraesCS3B01G230300 chr5A 506134965 506137752 2787 True 5018.00 5018 99.1750 666 3450 1 chr5A.!!$R1 2784
8 TraesCS3B01G230300 chr2A 310410037 310415269 5232 True 2656.00 5055 94.7510 611 3450 2 chr2A.!!$R2 2839
9 TraesCS3B01G230300 chr2A 84589310 84594387 5077 True 2653.50 5009 96.4460 612 3450 2 chr2A.!!$R1 2838
10 TraesCS3B01G230300 chr7B 312339095 312341953 2858 True 5040.00 5040 98.6010 612 3450 1 chr7B.!!$R1 2838
11 TraesCS3B01G230300 chr7B 244398064 244400854 2790 False 5024.00 5024 99.1760 663 3450 1 chr7B.!!$F1 2787
12 TraesCS3B01G230300 chr3D 228170883 228171472 589 True 441.10 822 96.5610 1 611 2 chr3D.!!$R1 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
541 542 0.030638 CCCACGCAACTCCTTTTGTG 59.969 55.0 0.0 0.0 41.8 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2499 2835 4.386711 ACTCCAACTAGTACAGCCAAAAC 58.613 43.478 0.0 0.0 0.0 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.033114 CTCAAGTGCTGAGCGAGAG 57.967 57.895 0.00 0.35 45.11 3.20
43 44 0.243365 CTCAAGTGCTGAGCGAGAGT 59.757 55.000 0.00 0.00 45.11 3.24
44 45 0.676184 TCAAGTGCTGAGCGAGAGTT 59.324 50.000 0.00 0.00 0.00 3.01
45 46 1.886542 TCAAGTGCTGAGCGAGAGTTA 59.113 47.619 0.00 0.00 0.00 2.24
46 47 2.296190 TCAAGTGCTGAGCGAGAGTTAA 59.704 45.455 0.00 0.00 0.00 2.01
47 48 3.056536 TCAAGTGCTGAGCGAGAGTTAAT 60.057 43.478 0.00 0.00 0.00 1.40
48 49 4.157840 TCAAGTGCTGAGCGAGAGTTAATA 59.842 41.667 0.00 0.00 0.00 0.98
49 50 4.300189 AGTGCTGAGCGAGAGTTAATAG 57.700 45.455 0.00 0.00 0.00 1.73
50 51 3.697045 AGTGCTGAGCGAGAGTTAATAGT 59.303 43.478 0.00 0.00 0.00 2.12
51 52 3.794028 GTGCTGAGCGAGAGTTAATAGTG 59.206 47.826 0.00 0.00 0.00 2.74
52 53 3.444034 TGCTGAGCGAGAGTTAATAGTGT 59.556 43.478 0.00 0.00 0.00 3.55
53 54 4.082190 TGCTGAGCGAGAGTTAATAGTGTT 60.082 41.667 0.00 0.00 0.00 3.32
54 55 4.266502 GCTGAGCGAGAGTTAATAGTGTTG 59.733 45.833 0.00 0.00 0.00 3.33
55 56 5.638596 TGAGCGAGAGTTAATAGTGTTGA 57.361 39.130 0.00 0.00 0.00 3.18
56 57 5.641709 TGAGCGAGAGTTAATAGTGTTGAG 58.358 41.667 0.00 0.00 0.00 3.02
57 58 4.425520 AGCGAGAGTTAATAGTGTTGAGC 58.574 43.478 0.00 0.00 0.00 4.26
58 59 3.240861 GCGAGAGTTAATAGTGTTGAGCG 59.759 47.826 0.00 0.00 0.00 5.03
59 60 4.659088 CGAGAGTTAATAGTGTTGAGCGA 58.341 43.478 0.00 0.00 0.00 4.93
102 103 3.181465 CCACACTATGGCTAGGGTAACAG 60.181 52.174 0.00 0.00 39.68 3.16
103 104 3.039011 ACACTATGGCTAGGGTAACAGG 58.961 50.000 0.00 0.00 39.90 4.00
104 105 3.039011 CACTATGGCTAGGGTAACAGGT 58.961 50.000 0.00 0.00 39.74 4.00
105 106 4.220724 CACTATGGCTAGGGTAACAGGTA 58.779 47.826 0.00 0.00 39.74 3.08
106 107 4.652421 CACTATGGCTAGGGTAACAGGTAA 59.348 45.833 0.00 0.00 39.74 2.85
107 108 4.652881 ACTATGGCTAGGGTAACAGGTAAC 59.347 45.833 0.00 0.00 39.74 2.50
108 109 2.190538 TGGCTAGGGTAACAGGTAACC 58.809 52.381 0.00 0.00 40.33 2.85
109 110 2.190538 GGCTAGGGTAACAGGTAACCA 58.809 52.381 1.24 0.00 42.85 3.67
110 111 2.093288 GGCTAGGGTAACAGGTAACCAC 60.093 54.545 1.24 0.00 42.85 4.16
111 112 2.093288 GCTAGGGTAACAGGTAACCACC 60.093 54.545 1.24 0.00 42.85 4.61
124 125 5.523438 GGTAACCACCAATTCTGACAAAA 57.477 39.130 0.00 0.00 45.04 2.44
125 126 6.096673 GGTAACCACCAATTCTGACAAAAT 57.903 37.500 0.00 0.00 45.04 1.82
126 127 6.521162 GGTAACCACCAATTCTGACAAAATT 58.479 36.000 0.00 0.00 45.04 1.82
127 128 6.645003 GGTAACCACCAATTCTGACAAAATTC 59.355 38.462 0.00 0.00 45.04 2.17
128 129 5.867903 ACCACCAATTCTGACAAAATTCA 57.132 34.783 0.00 0.00 0.00 2.57
129 130 6.232581 ACCACCAATTCTGACAAAATTCAA 57.767 33.333 0.00 0.00 0.00 2.69
130 131 6.829849 ACCACCAATTCTGACAAAATTCAAT 58.170 32.000 0.00 0.00 0.00 2.57
131 132 7.961351 ACCACCAATTCTGACAAAATTCAATA 58.039 30.769 0.00 0.00 0.00 1.90
132 133 8.428063 ACCACCAATTCTGACAAAATTCAATAA 58.572 29.630 0.00 0.00 0.00 1.40
133 134 9.270640 CCACCAATTCTGACAAAATTCAATAAA 57.729 29.630 0.00 0.00 0.00 1.40
141 142 9.658799 TCTGACAAAATTCAATAAAAACAACCA 57.341 25.926 0.00 0.00 0.00 3.67
142 143 9.701355 CTGACAAAATTCAATAAAAACAACCAC 57.299 29.630 0.00 0.00 0.00 4.16
143 144 9.442047 TGACAAAATTCAATAAAAACAACCACT 57.558 25.926 0.00 0.00 0.00 4.00
148 149 9.883142 AAATTCAATAAAAACAACCACTTCAGA 57.117 25.926 0.00 0.00 0.00 3.27
149 150 9.533253 AATTCAATAAAAACAACCACTTCAGAG 57.467 29.630 0.00 0.00 0.00 3.35
150 151 7.038154 TCAATAAAAACAACCACTTCAGAGG 57.962 36.000 0.00 0.00 0.00 3.69
151 152 3.801114 AAAAACAACCACTTCAGAGGC 57.199 42.857 0.00 0.00 0.00 4.70
152 153 1.692411 AAACAACCACTTCAGAGGCC 58.308 50.000 0.00 0.00 0.00 5.19
153 154 0.535102 AACAACCACTTCAGAGGCCG 60.535 55.000 0.00 0.00 0.00 6.13
154 155 1.371183 CAACCACTTCAGAGGCCGA 59.629 57.895 0.00 0.00 0.00 5.54
155 156 0.036010 CAACCACTTCAGAGGCCGAT 60.036 55.000 0.00 0.00 0.00 4.18
156 157 0.036010 AACCACTTCAGAGGCCGATG 60.036 55.000 0.00 0.00 0.00 3.84
157 158 0.904865 ACCACTTCAGAGGCCGATGA 60.905 55.000 8.68 8.68 0.00 2.92
158 159 0.179089 CCACTTCAGAGGCCGATGAG 60.179 60.000 12.00 9.49 0.00 2.90
159 160 0.534412 CACTTCAGAGGCCGATGAGT 59.466 55.000 12.00 10.00 0.00 3.41
160 161 1.751351 CACTTCAGAGGCCGATGAGTA 59.249 52.381 12.00 0.00 0.00 2.59
161 162 2.166459 CACTTCAGAGGCCGATGAGTAA 59.834 50.000 12.00 0.00 0.00 2.24
162 163 2.166664 ACTTCAGAGGCCGATGAGTAAC 59.833 50.000 12.00 0.00 0.00 2.50
163 164 1.847328 TCAGAGGCCGATGAGTAACA 58.153 50.000 8.68 0.00 0.00 2.41
164 165 2.176045 TCAGAGGCCGATGAGTAACAA 58.824 47.619 8.68 0.00 0.00 2.83
165 166 2.565391 TCAGAGGCCGATGAGTAACAAA 59.435 45.455 8.68 0.00 0.00 2.83
166 167 3.197766 TCAGAGGCCGATGAGTAACAAAT 59.802 43.478 8.68 0.00 0.00 2.32
167 168 4.404394 TCAGAGGCCGATGAGTAACAAATA 59.596 41.667 8.68 0.00 0.00 1.40
168 169 5.105106 TCAGAGGCCGATGAGTAACAAATAA 60.105 40.000 8.68 0.00 0.00 1.40
169 170 5.006746 CAGAGGCCGATGAGTAACAAATAAC 59.993 44.000 4.34 0.00 0.00 1.89
170 171 4.839121 AGGCCGATGAGTAACAAATAACA 58.161 39.130 0.00 0.00 0.00 2.41
171 172 4.634443 AGGCCGATGAGTAACAAATAACAC 59.366 41.667 0.00 0.00 0.00 3.32
172 173 4.634443 GGCCGATGAGTAACAAATAACACT 59.366 41.667 0.00 0.00 0.00 3.55
173 174 5.447279 GGCCGATGAGTAACAAATAACACTG 60.447 44.000 0.00 0.00 0.00 3.66
174 175 5.350365 GCCGATGAGTAACAAATAACACTGA 59.650 40.000 0.00 0.00 0.00 3.41
175 176 6.037172 GCCGATGAGTAACAAATAACACTGAT 59.963 38.462 0.00 0.00 0.00 2.90
176 177 7.414098 GCCGATGAGTAACAAATAACACTGATT 60.414 37.037 0.00 0.00 0.00 2.57
177 178 8.116753 CCGATGAGTAACAAATAACACTGATTC 58.883 37.037 0.00 0.00 0.00 2.52
178 179 8.655970 CGATGAGTAACAAATAACACTGATTCA 58.344 33.333 0.00 0.00 0.00 2.57
181 182 8.729756 TGAGTAACAAATAACACTGATTCATGG 58.270 33.333 0.00 0.00 0.00 3.66
182 183 8.862325 AGTAACAAATAACACTGATTCATGGA 57.138 30.769 0.00 0.00 0.00 3.41
183 184 9.466497 AGTAACAAATAACACTGATTCATGGAT 57.534 29.630 0.00 0.00 0.00 3.41
187 188 8.408601 ACAAATAACACTGATTCATGGATTAGC 58.591 33.333 5.68 0.00 0.00 3.09
188 189 8.627403 CAAATAACACTGATTCATGGATTAGCT 58.373 33.333 5.68 0.00 0.00 3.32
189 190 7.976135 ATAACACTGATTCATGGATTAGCTC 57.024 36.000 5.68 0.00 0.00 4.09
190 191 4.375272 ACACTGATTCATGGATTAGCTCG 58.625 43.478 5.68 0.00 0.00 5.03
191 192 3.744942 CACTGATTCATGGATTAGCTCGG 59.255 47.826 5.68 0.00 0.00 4.63
192 193 3.643320 ACTGATTCATGGATTAGCTCGGA 59.357 43.478 5.68 0.00 0.00 4.55
193 194 3.993081 CTGATTCATGGATTAGCTCGGAC 59.007 47.826 0.00 0.00 0.00 4.79
194 195 3.387699 TGATTCATGGATTAGCTCGGACA 59.612 43.478 0.00 0.00 0.00 4.02
195 196 3.904800 TTCATGGATTAGCTCGGACAA 57.095 42.857 0.00 0.00 0.00 3.18
196 197 3.904800 TCATGGATTAGCTCGGACAAA 57.095 42.857 0.00 0.00 0.00 2.83
197 198 3.531538 TCATGGATTAGCTCGGACAAAC 58.468 45.455 0.00 0.00 0.00 2.93
198 199 3.055458 TCATGGATTAGCTCGGACAAACA 60.055 43.478 0.00 0.00 0.00 2.83
199 200 2.972625 TGGATTAGCTCGGACAAACAG 58.027 47.619 0.00 0.00 0.00 3.16
200 201 1.666189 GGATTAGCTCGGACAAACAGC 59.334 52.381 0.00 0.00 0.00 4.40
201 202 2.346803 GATTAGCTCGGACAAACAGCA 58.653 47.619 0.00 0.00 35.46 4.41
202 203 2.248280 TTAGCTCGGACAAACAGCAA 57.752 45.000 0.00 0.00 35.46 3.91
203 204 2.248280 TAGCTCGGACAAACAGCAAA 57.752 45.000 0.00 0.00 35.46 3.68
204 205 1.388547 AGCTCGGACAAACAGCAAAA 58.611 45.000 0.00 0.00 35.46 2.44
205 206 1.065551 AGCTCGGACAAACAGCAAAAC 59.934 47.619 0.00 0.00 35.46 2.43
206 207 1.065551 GCTCGGACAAACAGCAAAACT 59.934 47.619 0.00 0.00 33.06 2.66
222 223 4.326255 CTGATTGGCAGGACCCAC 57.674 61.111 0.00 0.00 41.07 4.61
223 224 1.379044 CTGATTGGCAGGACCCACC 60.379 63.158 0.00 0.00 41.07 4.61
224 225 2.043953 GATTGGCAGGACCCACCC 60.044 66.667 0.00 0.00 40.05 4.61
225 226 3.995506 GATTGGCAGGACCCACCCG 62.996 68.421 0.00 0.00 40.05 5.28
230 231 4.065281 CAGGACCCACCCGTCGAC 62.065 72.222 5.18 5.18 40.05 4.20
231 232 4.296729 AGGACCCACCCGTCGACT 62.297 66.667 14.70 0.00 40.05 4.18
232 233 4.065281 GGACCCACCCGTCGACTG 62.065 72.222 14.70 7.04 33.30 3.51
233 234 2.987547 GACCCACCCGTCGACTGA 60.988 66.667 14.70 0.00 0.00 3.41
234 235 3.278592 GACCCACCCGTCGACTGAC 62.279 68.421 14.70 0.00 41.91 3.51
235 236 3.299977 CCCACCCGTCGACTGACA 61.300 66.667 14.70 0.00 45.80 3.58
236 237 2.049433 CCACCCGTCGACTGACAC 60.049 66.667 14.70 0.00 45.80 3.67
237 238 2.428569 CACCCGTCGACTGACACG 60.429 66.667 14.70 0.00 45.80 4.49
238 239 4.338539 ACCCGTCGACTGACACGC 62.339 66.667 14.70 0.00 45.80 5.34
239 240 4.337060 CCCGTCGACTGACACGCA 62.337 66.667 14.70 0.00 45.80 5.24
240 241 2.126463 CCGTCGACTGACACGCAT 60.126 61.111 14.70 0.00 45.80 4.73
241 242 2.436539 CCGTCGACTGACACGCATG 61.437 63.158 14.70 0.00 45.80 4.06
242 243 2.772189 GTCGACTGACACGCATGC 59.228 61.111 7.91 7.91 44.82 4.06
243 244 1.734477 GTCGACTGACACGCATGCT 60.734 57.895 17.13 0.00 44.82 3.79
244 245 1.006220 TCGACTGACACGCATGCTT 60.006 52.632 17.13 2.67 0.00 3.91
245 246 0.242555 TCGACTGACACGCATGCTTA 59.757 50.000 17.13 0.00 0.00 3.09
246 247 1.135112 TCGACTGACACGCATGCTTAT 60.135 47.619 17.13 0.00 0.00 1.73
247 248 1.005662 CGACTGACACGCATGCTTATG 60.006 52.381 17.13 13.45 0.00 1.90
248 249 2.002586 GACTGACACGCATGCTTATGT 58.997 47.619 17.13 16.61 0.00 2.29
249 250 1.733912 ACTGACACGCATGCTTATGTG 59.266 47.619 19.88 19.09 38.28 3.21
251 252 2.929398 CTGACACGCATGCTTATGTGTA 59.071 45.455 23.37 13.64 44.93 2.90
252 253 2.670905 TGACACGCATGCTTATGTGTAC 59.329 45.455 23.37 17.81 44.93 2.90
253 254 2.670905 GACACGCATGCTTATGTGTACA 59.329 45.455 23.37 0.00 44.93 2.90
254 255 2.415168 ACACGCATGCTTATGTGTACAC 59.585 45.455 22.44 19.36 43.27 2.90
255 256 2.672874 CACGCATGCTTATGTGTACACT 59.327 45.455 25.60 14.02 42.69 3.55
256 257 3.125146 CACGCATGCTTATGTGTACACTT 59.875 43.478 25.60 21.35 42.69 3.16
257 258 3.751175 ACGCATGCTTATGTGTACACTTT 59.249 39.130 25.60 15.71 42.74 2.66
258 259 4.215399 ACGCATGCTTATGTGTACACTTTT 59.785 37.500 25.60 13.40 42.74 2.27
259 260 5.410132 ACGCATGCTTATGTGTACACTTTTA 59.590 36.000 25.60 12.48 42.74 1.52
260 261 5.732647 CGCATGCTTATGTGTACACTTTTAC 59.267 40.000 25.60 13.34 0.00 2.01
261 262 6.027749 GCATGCTTATGTGTACACTTTTACC 58.972 40.000 25.60 10.88 0.00 2.85
262 263 6.551736 CATGCTTATGTGTACACTTTTACCC 58.448 40.000 25.60 9.45 0.00 3.69
263 264 5.622180 TGCTTATGTGTACACTTTTACCCA 58.378 37.500 25.60 11.65 0.00 4.51
264 265 5.470777 TGCTTATGTGTACACTTTTACCCAC 59.529 40.000 25.60 7.94 0.00 4.61
265 266 5.106436 GCTTATGTGTACACTTTTACCCACC 60.106 44.000 25.60 0.00 0.00 4.61
266 267 4.717279 ATGTGTACACTTTTACCCACCT 57.283 40.909 25.60 0.00 0.00 4.00
267 268 4.506937 TGTGTACACTTTTACCCACCTT 57.493 40.909 25.60 0.00 0.00 3.50
268 269 4.857679 TGTGTACACTTTTACCCACCTTT 58.142 39.130 25.60 0.00 0.00 3.11
269 270 4.883006 TGTGTACACTTTTACCCACCTTTC 59.117 41.667 25.60 0.00 0.00 2.62
270 271 4.276678 GTGTACACTTTTACCCACCTTTCC 59.723 45.833 18.92 0.00 0.00 3.13
271 272 2.953453 ACACTTTTACCCACCTTTCCC 58.047 47.619 0.00 0.00 0.00 3.97
272 273 2.244695 CACTTTTACCCACCTTTCCCC 58.755 52.381 0.00 0.00 0.00 4.81
273 274 2.149556 ACTTTTACCCACCTTTCCCCT 58.850 47.619 0.00 0.00 0.00 4.79
274 275 2.520980 ACTTTTACCCACCTTTCCCCTT 59.479 45.455 0.00 0.00 0.00 3.95
275 276 3.051650 ACTTTTACCCACCTTTCCCCTTT 60.052 43.478 0.00 0.00 0.00 3.11
276 277 3.710086 TTTACCCACCTTTCCCCTTTT 57.290 42.857 0.00 0.00 0.00 2.27
277 278 3.710086 TTACCCACCTTTCCCCTTTTT 57.290 42.857 0.00 0.00 0.00 1.94
278 279 2.097110 ACCCACCTTTCCCCTTTTTC 57.903 50.000 0.00 0.00 0.00 2.29
279 280 1.578703 ACCCACCTTTCCCCTTTTTCT 59.421 47.619 0.00 0.00 0.00 2.52
280 281 2.248248 CCCACCTTTCCCCTTTTTCTC 58.752 52.381 0.00 0.00 0.00 2.87
281 282 2.248248 CCACCTTTCCCCTTTTTCTCC 58.752 52.381 0.00 0.00 0.00 3.71
282 283 2.158310 CCACCTTTCCCCTTTTTCTCCT 60.158 50.000 0.00 0.00 0.00 3.69
283 284 3.157881 CACCTTTCCCCTTTTTCTCCTC 58.842 50.000 0.00 0.00 0.00 3.71
284 285 3.064412 ACCTTTCCCCTTTTTCTCCTCT 58.936 45.455 0.00 0.00 0.00 3.69
285 286 3.074687 ACCTTTCCCCTTTTTCTCCTCTC 59.925 47.826 0.00 0.00 0.00 3.20
286 287 3.332187 CCTTTCCCCTTTTTCTCCTCTCT 59.668 47.826 0.00 0.00 0.00 3.10
287 288 4.566697 CCTTTCCCCTTTTTCTCCTCTCTC 60.567 50.000 0.00 0.00 0.00 3.20
288 289 3.569135 TCCCCTTTTTCTCCTCTCTCT 57.431 47.619 0.00 0.00 0.00 3.10
289 290 3.445987 TCCCCTTTTTCTCCTCTCTCTC 58.554 50.000 0.00 0.00 0.00 3.20
290 291 2.503765 CCCCTTTTTCTCCTCTCTCTCC 59.496 54.545 0.00 0.00 0.00 3.71
291 292 2.503765 CCCTTTTTCTCCTCTCTCTCCC 59.496 54.545 0.00 0.00 0.00 4.30
292 293 3.449918 CCTTTTTCTCCTCTCTCTCCCT 58.550 50.000 0.00 0.00 0.00 4.20
293 294 3.450817 CCTTTTTCTCCTCTCTCTCCCTC 59.549 52.174 0.00 0.00 0.00 4.30
294 295 4.352893 CTTTTTCTCCTCTCTCTCCCTCT 58.647 47.826 0.00 0.00 0.00 3.69
295 296 3.662759 TTTCTCCTCTCTCTCCCTCTC 57.337 52.381 0.00 0.00 0.00 3.20
296 297 1.518367 TCTCCTCTCTCTCCCTCTCC 58.482 60.000 0.00 0.00 0.00 3.71
297 298 0.478507 CTCCTCTCTCTCCCTCTCCC 59.521 65.000 0.00 0.00 0.00 4.30
298 299 0.253868 TCCTCTCTCTCCCTCTCCCA 60.254 60.000 0.00 0.00 0.00 4.37
299 300 0.633921 CCTCTCTCTCCCTCTCCCAA 59.366 60.000 0.00 0.00 0.00 4.12
300 301 1.007721 CCTCTCTCTCCCTCTCCCAAA 59.992 57.143 0.00 0.00 0.00 3.28
301 302 2.360209 CCTCTCTCTCCCTCTCCCAAAT 60.360 54.545 0.00 0.00 0.00 2.32
302 303 2.965147 CTCTCTCTCCCTCTCCCAAATC 59.035 54.545 0.00 0.00 0.00 2.17
303 304 2.316067 TCTCTCTCCCTCTCCCAAATCA 59.684 50.000 0.00 0.00 0.00 2.57
304 305 3.051496 TCTCTCTCCCTCTCCCAAATCAT 60.051 47.826 0.00 0.00 0.00 2.45
305 306 3.312890 TCTCTCCCTCTCCCAAATCATC 58.687 50.000 0.00 0.00 0.00 2.92
306 307 2.371510 CTCTCCCTCTCCCAAATCATCC 59.628 54.545 0.00 0.00 0.00 3.51
307 308 2.130193 CTCCCTCTCCCAAATCATCCA 58.870 52.381 0.00 0.00 0.00 3.41
308 309 2.715336 CTCCCTCTCCCAAATCATCCAT 59.285 50.000 0.00 0.00 0.00 3.41
309 310 2.444388 TCCCTCTCCCAAATCATCCATG 59.556 50.000 0.00 0.00 0.00 3.66
310 311 2.236766 CCTCTCCCAAATCATCCATGC 58.763 52.381 0.00 0.00 0.00 4.06
311 312 2.236766 CTCTCCCAAATCATCCATGCC 58.763 52.381 0.00 0.00 0.00 4.40
312 313 1.570024 TCTCCCAAATCATCCATGCCA 59.430 47.619 0.00 0.00 0.00 4.92
313 314 2.178325 TCTCCCAAATCATCCATGCCAT 59.822 45.455 0.00 0.00 0.00 4.40
314 315 2.299013 CTCCCAAATCATCCATGCCATG 59.701 50.000 0.00 0.00 0.00 3.66
315 316 1.270625 CCCAAATCATCCATGCCATGC 60.271 52.381 0.00 0.00 0.00 4.06
316 317 1.270625 CCAAATCATCCATGCCATGCC 60.271 52.381 0.00 0.00 0.00 4.40
317 318 0.677288 AAATCATCCATGCCATGCCG 59.323 50.000 0.00 0.00 0.00 5.69
318 319 1.812686 AATCATCCATGCCATGCCGC 61.813 55.000 0.00 0.00 0.00 6.53
319 320 4.337060 CATCCATGCCATGCCGCG 62.337 66.667 0.00 0.00 0.00 6.46
320 321 4.567488 ATCCATGCCATGCCGCGA 62.567 61.111 8.23 0.00 0.00 5.87
321 322 3.855503 ATCCATGCCATGCCGCGAT 62.856 57.895 8.23 0.00 0.00 4.58
322 323 4.337060 CCATGCCATGCCGCGATG 62.337 66.667 8.23 3.81 0.00 3.84
323 324 4.337060 CATGCCATGCCGCGATGG 62.337 66.667 19.65 19.65 45.20 3.51
324 325 4.567488 ATGCCATGCCGCGATGGA 62.567 61.111 26.15 13.85 45.24 3.41
327 328 4.923942 CCATGCCGCGATGGAGCT 62.924 66.667 19.33 0.00 45.24 4.09
328 329 3.344215 CATGCCGCGATGGAGCTC 61.344 66.667 8.23 4.71 42.00 4.09
329 330 4.957684 ATGCCGCGATGGAGCTCG 62.958 66.667 8.23 0.00 42.00 5.03
332 333 4.933064 CCGCGATGGAGCTCGGTC 62.933 72.222 8.23 7.25 42.00 4.79
333 334 3.893763 CGCGATGGAGCTCGGTCT 61.894 66.667 7.83 0.00 39.05 3.85
334 335 2.279120 GCGATGGAGCTCGGTCTG 60.279 66.667 7.83 6.15 39.05 3.51
335 336 3.069980 GCGATGGAGCTCGGTCTGT 62.070 63.158 7.83 0.00 39.05 3.41
336 337 1.226802 CGATGGAGCTCGGTCTGTG 60.227 63.158 7.83 0.00 35.03 3.66
337 338 1.520342 GATGGAGCTCGGTCTGTGC 60.520 63.158 7.83 0.00 37.35 4.57
338 339 2.230994 GATGGAGCTCGGTCTGTGCA 62.231 60.000 7.83 0.00 39.54 4.57
339 340 2.125753 GGAGCTCGGTCTGTGCAG 60.126 66.667 7.83 0.00 39.54 4.41
340 341 2.813042 GAGCTCGGTCTGTGCAGC 60.813 66.667 0.00 0.00 39.54 5.25
341 342 4.385405 AGCTCGGTCTGTGCAGCC 62.385 66.667 8.36 0.00 39.54 4.85
375 376 3.706373 CCGAGGGGACACCACCAG 61.706 72.222 0.00 0.00 43.89 4.00
376 377 3.706373 CGAGGGGACACCACCAGG 61.706 72.222 0.00 0.00 43.89 4.45
377 378 3.330720 GAGGGGACACCACCAGGG 61.331 72.222 0.00 0.00 43.89 4.45
378 379 3.864983 GAGGGGACACCACCAGGGA 62.865 68.421 0.00 0.00 43.89 4.20
379 380 3.330720 GGGGACACCACCAGGGAG 61.331 72.222 0.00 0.00 41.15 4.30
380 381 2.529389 GGGACACCACCAGGGAGT 60.529 66.667 0.00 0.00 43.78 3.85
381 382 1.229400 GGGACACCACCAGGGAGTA 60.229 63.158 0.00 0.00 40.90 2.59
382 383 1.265454 GGGACACCACCAGGGAGTAG 61.265 65.000 0.00 0.00 40.90 2.57
383 384 0.252103 GGACACCACCAGGGAGTAGA 60.252 60.000 0.00 0.00 40.90 2.59
384 385 1.640917 GACACCACCAGGGAGTAGAA 58.359 55.000 0.00 0.00 40.90 2.10
385 386 1.550976 GACACCACCAGGGAGTAGAAG 59.449 57.143 0.00 0.00 40.90 2.85
386 387 0.250513 CACCACCAGGGAGTAGAAGC 59.749 60.000 0.00 0.00 41.15 3.86
387 388 0.910088 ACCACCAGGGAGTAGAAGCC 60.910 60.000 0.00 0.00 41.15 4.35
388 389 0.909610 CCACCAGGGAGTAGAAGCCA 60.910 60.000 0.00 0.00 40.01 4.75
389 390 0.250513 CACCAGGGAGTAGAAGCCAC 59.749 60.000 0.00 0.00 0.00 5.01
390 391 0.910088 ACCAGGGAGTAGAAGCCACC 60.910 60.000 0.00 0.00 0.00 4.61
391 392 0.909610 CCAGGGAGTAGAAGCCACCA 60.910 60.000 0.00 0.00 0.00 4.17
392 393 0.250513 CAGGGAGTAGAAGCCACCAC 59.749 60.000 0.00 0.00 0.00 4.16
393 394 0.910088 AGGGAGTAGAAGCCACCACC 60.910 60.000 0.00 0.00 0.00 4.61
394 395 1.218316 GGAGTAGAAGCCACCACCG 59.782 63.158 0.00 0.00 0.00 4.94
395 396 1.448013 GAGTAGAAGCCACCACCGC 60.448 63.158 0.00 0.00 0.00 5.68
396 397 2.813908 GTAGAAGCCACCACCGCG 60.814 66.667 0.00 0.00 0.00 6.46
397 398 2.992689 TAGAAGCCACCACCGCGA 60.993 61.111 8.23 0.00 0.00 5.87
398 399 2.575893 TAGAAGCCACCACCGCGAA 61.576 57.895 8.23 0.00 0.00 4.70
399 400 2.501223 TAGAAGCCACCACCGCGAAG 62.501 60.000 8.23 0.00 0.00 3.79
412 413 2.793946 CGAAGCCAAATGCCCGAG 59.206 61.111 0.00 0.00 42.71 4.63
413 414 2.491621 GAAGCCAAATGCCCGAGC 59.508 61.111 0.00 0.00 42.71 5.03
414 415 3.068729 GAAGCCAAATGCCCGAGCC 62.069 63.158 0.00 0.00 42.71 4.70
415 416 3.884704 AAGCCAAATGCCCGAGCCA 62.885 57.895 0.00 0.00 42.71 4.75
416 417 3.149648 GCCAAATGCCCGAGCCAT 61.150 61.111 0.00 0.00 38.69 4.40
417 418 2.809706 CCAAATGCCCGAGCCATG 59.190 61.111 0.00 0.00 38.69 3.66
418 419 2.788640 CCAAATGCCCGAGCCATGG 61.789 63.158 7.63 7.63 38.69 3.66
419 420 1.753848 CAAATGCCCGAGCCATGGA 60.754 57.895 18.40 0.00 38.69 3.41
420 421 1.454479 AAATGCCCGAGCCATGGAG 60.454 57.895 18.40 5.57 38.69 3.86
421 422 4.575973 ATGCCCGAGCCATGGAGC 62.576 66.667 18.40 9.96 38.69 4.70
424 425 4.899239 CCCGAGCCATGGAGCGAC 62.899 72.222 23.17 3.42 38.01 5.19
426 427 4.193334 CGAGCCATGGAGCGACGA 62.193 66.667 18.40 0.00 38.79 4.20
427 428 2.583593 GAGCCATGGAGCGACGAC 60.584 66.667 18.40 0.00 38.01 4.34
428 429 4.498520 AGCCATGGAGCGACGACG 62.499 66.667 18.40 2.12 42.93 5.12
429 430 4.492160 GCCATGGAGCGACGACGA 62.492 66.667 18.40 0.00 42.66 4.20
430 431 2.278206 CCATGGAGCGACGACGAG 60.278 66.667 12.29 0.00 42.66 4.18
431 432 2.761195 CCATGGAGCGACGACGAGA 61.761 63.158 12.29 0.00 42.66 4.04
432 433 1.583967 CATGGAGCGACGACGAGAC 60.584 63.158 12.29 0.00 42.66 3.36
433 434 1.745864 ATGGAGCGACGACGAGACT 60.746 57.895 12.29 0.00 42.66 3.24
434 435 1.306642 ATGGAGCGACGACGAGACTT 61.307 55.000 12.29 0.00 42.66 3.01
435 436 1.226073 GGAGCGACGACGAGACTTC 60.226 63.158 12.29 0.00 42.66 3.01
436 437 1.226073 GAGCGACGACGAGACTTCC 60.226 63.158 12.29 0.00 42.66 3.46
437 438 2.573689 GCGACGACGAGACTTCCG 60.574 66.667 12.29 0.00 42.66 4.30
438 439 2.573689 CGACGACGAGACTTCCGC 60.574 66.667 0.00 0.00 42.66 5.54
439 440 2.202453 GACGACGAGACTTCCGCC 60.202 66.667 0.00 0.00 0.00 6.13
440 441 2.974489 GACGACGAGACTTCCGCCA 61.974 63.158 0.00 0.00 0.00 5.69
441 442 2.267681 GACGACGAGACTTCCGCCAT 62.268 60.000 0.00 0.00 0.00 4.40
442 443 1.874019 CGACGAGACTTCCGCCATG 60.874 63.158 0.00 0.00 0.00 3.66
443 444 1.511305 GACGAGACTTCCGCCATGA 59.489 57.895 0.00 0.00 0.00 3.07
444 445 0.526524 GACGAGACTTCCGCCATGAG 60.527 60.000 0.00 0.00 0.00 2.90
445 446 0.965866 ACGAGACTTCCGCCATGAGA 60.966 55.000 0.00 0.00 0.00 3.27
446 447 0.173481 CGAGACTTCCGCCATGAGAA 59.827 55.000 0.00 0.00 0.00 2.87
447 448 1.404181 CGAGACTTCCGCCATGAGAAA 60.404 52.381 0.00 0.00 0.00 2.52
448 449 2.275318 GAGACTTCCGCCATGAGAAAG 58.725 52.381 0.00 0.00 0.00 2.62
449 450 0.729690 GACTTCCGCCATGAGAAAGC 59.270 55.000 0.00 0.00 0.00 3.51
450 451 0.678048 ACTTCCGCCATGAGAAAGCC 60.678 55.000 0.00 0.00 0.00 4.35
451 452 1.378514 TTCCGCCATGAGAAAGCCC 60.379 57.895 0.00 0.00 0.00 5.19
452 453 1.852157 TTCCGCCATGAGAAAGCCCT 61.852 55.000 0.00 0.00 0.00 5.19
453 454 1.821332 CCGCCATGAGAAAGCCCTC 60.821 63.158 0.00 0.00 0.00 4.30
454 455 1.821332 CGCCATGAGAAAGCCCTCC 60.821 63.158 0.00 0.00 32.32 4.30
455 456 1.821332 GCCATGAGAAAGCCCTCCG 60.821 63.158 0.00 0.00 32.32 4.63
456 457 1.821332 CCATGAGAAAGCCCTCCGC 60.821 63.158 0.00 0.00 37.98 5.54
457 458 1.821332 CATGAGAAAGCCCTCCGCC 60.821 63.158 0.00 0.00 38.78 6.13
458 459 3.391665 ATGAGAAAGCCCTCCGCCG 62.392 63.158 0.00 0.00 38.78 6.46
468 469 3.458163 CTCCGCCGCCTCCACTAA 61.458 66.667 0.00 0.00 0.00 2.24
469 470 3.718210 CTCCGCCGCCTCCACTAAC 62.718 68.421 0.00 0.00 0.00 2.34
470 471 4.832608 CCGCCGCCTCCACTAACC 62.833 72.222 0.00 0.00 0.00 2.85
471 472 4.077184 CGCCGCCTCCACTAACCA 62.077 66.667 0.00 0.00 0.00 3.67
472 473 2.436115 GCCGCCTCCACTAACCAC 60.436 66.667 0.00 0.00 0.00 4.16
473 474 2.125673 CCGCCTCCACTAACCACG 60.126 66.667 0.00 0.00 0.00 4.94
474 475 2.125673 CGCCTCCACTAACCACGG 60.126 66.667 0.00 0.00 0.00 4.94
475 476 2.939261 CGCCTCCACTAACCACGGT 61.939 63.158 0.00 0.00 0.00 4.83
476 477 1.079336 GCCTCCACTAACCACGGTC 60.079 63.158 0.00 0.00 0.00 4.79
477 478 1.542187 GCCTCCACTAACCACGGTCT 61.542 60.000 0.00 0.00 0.00 3.85
478 479 0.531200 CCTCCACTAACCACGGTCTC 59.469 60.000 0.00 0.00 0.00 3.36
479 480 1.546961 CTCCACTAACCACGGTCTCT 58.453 55.000 0.00 0.00 0.00 3.10
480 481 1.473278 CTCCACTAACCACGGTCTCTC 59.527 57.143 0.00 0.00 0.00 3.20
481 482 0.531200 CCACTAACCACGGTCTCTCC 59.469 60.000 0.00 0.00 0.00 3.71
482 483 0.531200 CACTAACCACGGTCTCTCCC 59.469 60.000 0.00 0.00 0.00 4.30
483 484 0.614134 ACTAACCACGGTCTCTCCCC 60.614 60.000 0.00 0.00 0.00 4.81
484 485 0.613853 CTAACCACGGTCTCTCCCCA 60.614 60.000 0.00 0.00 0.00 4.96
485 486 0.178926 TAACCACGGTCTCTCCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
486 487 1.765597 AACCACGGTCTCTCCCCAAC 61.766 60.000 0.00 0.00 0.00 3.77
487 488 1.913762 CCACGGTCTCTCCCCAACT 60.914 63.158 0.00 0.00 0.00 3.16
488 489 1.592223 CACGGTCTCTCCCCAACTC 59.408 63.158 0.00 0.00 0.00 3.01
489 490 1.609794 ACGGTCTCTCCCCAACTCC 60.610 63.158 0.00 0.00 0.00 3.85
490 491 1.609501 CGGTCTCTCCCCAACTCCA 60.610 63.158 0.00 0.00 0.00 3.86
491 492 0.978146 CGGTCTCTCCCCAACTCCAT 60.978 60.000 0.00 0.00 0.00 3.41
492 493 1.290134 GGTCTCTCCCCAACTCCATT 58.710 55.000 0.00 0.00 0.00 3.16
493 494 1.636003 GGTCTCTCCCCAACTCCATTT 59.364 52.381 0.00 0.00 0.00 2.32
494 495 2.356227 GGTCTCTCCCCAACTCCATTTC 60.356 54.545 0.00 0.00 0.00 2.17
495 496 1.916181 TCTCTCCCCAACTCCATTTCC 59.084 52.381 0.00 0.00 0.00 3.13
496 497 0.999712 TCTCCCCAACTCCATTTCCC 59.000 55.000 0.00 0.00 0.00 3.97
497 498 0.033109 CTCCCCAACTCCATTTCCCC 60.033 60.000 0.00 0.00 0.00 4.81
498 499 1.001631 CCCCAACTCCATTTCCCCC 59.998 63.158 0.00 0.00 0.00 5.40
499 500 1.379843 CCCAACTCCATTTCCCCCG 60.380 63.158 0.00 0.00 0.00 5.73
500 501 2.052104 CCAACTCCATTTCCCCCGC 61.052 63.158 0.00 0.00 0.00 6.13
501 502 1.304052 CAACTCCATTTCCCCCGCA 60.304 57.895 0.00 0.00 0.00 5.69
502 503 0.684153 CAACTCCATTTCCCCCGCAT 60.684 55.000 0.00 0.00 0.00 4.73
503 504 0.684153 AACTCCATTTCCCCCGCATG 60.684 55.000 0.00 0.00 0.00 4.06
504 505 1.076777 CTCCATTTCCCCCGCATGT 60.077 57.895 0.00 0.00 0.00 3.21
505 506 1.379710 TCCATTTCCCCCGCATGTG 60.380 57.895 0.00 0.00 0.00 3.21
506 507 2.495866 CATTTCCCCCGCATGTGC 59.504 61.111 0.00 0.00 37.78 4.57
507 508 2.037049 ATTTCCCCCGCATGTGCA 59.963 55.556 0.00 0.00 42.21 4.57
508 509 1.381599 ATTTCCCCCGCATGTGCAT 60.382 52.632 0.00 0.00 42.21 3.96
509 510 1.394266 ATTTCCCCCGCATGTGCATC 61.394 55.000 0.00 0.00 42.21 3.91
510 511 4.504596 TCCCCCGCATGTGCATCC 62.505 66.667 0.00 0.00 42.21 3.51
513 514 4.511246 CCCGCATGTGCATCCCCT 62.511 66.667 0.00 0.00 42.21 4.79
514 515 2.440796 CCGCATGTGCATCCCCTT 60.441 61.111 0.00 0.00 42.21 3.95
515 516 2.053865 CCGCATGTGCATCCCCTTT 61.054 57.895 0.00 0.00 42.21 3.11
516 517 1.606885 CCGCATGTGCATCCCCTTTT 61.607 55.000 0.00 0.00 42.21 2.27
517 518 0.247185 CGCATGTGCATCCCCTTTTT 59.753 50.000 5.77 0.00 42.21 1.94
518 519 1.736696 CGCATGTGCATCCCCTTTTTC 60.737 52.381 5.77 0.00 42.21 2.29
519 520 1.405933 GCATGTGCATCCCCTTTTTCC 60.406 52.381 0.00 0.00 41.59 3.13
520 521 2.181975 CATGTGCATCCCCTTTTTCCT 58.818 47.619 0.00 0.00 0.00 3.36
521 522 1.631405 TGTGCATCCCCTTTTTCCTG 58.369 50.000 0.00 0.00 0.00 3.86
522 523 0.247460 GTGCATCCCCTTTTTCCTGC 59.753 55.000 0.00 0.00 0.00 4.85
523 524 0.904394 TGCATCCCCTTTTTCCTGCC 60.904 55.000 0.00 0.00 0.00 4.85
524 525 1.617018 GCATCCCCTTTTTCCTGCCC 61.617 60.000 0.00 0.00 0.00 5.36
525 526 0.252193 CATCCCCTTTTTCCTGCCCA 60.252 55.000 0.00 0.00 0.00 5.36
526 527 0.252239 ATCCCCTTTTTCCTGCCCAC 60.252 55.000 0.00 0.00 0.00 4.61
527 528 2.275380 CCCCTTTTTCCTGCCCACG 61.275 63.158 0.00 0.00 0.00 4.94
528 529 2.650778 CCTTTTTCCTGCCCACGC 59.349 61.111 0.00 0.00 0.00 5.34
529 530 2.199652 CCTTTTTCCTGCCCACGCA 61.200 57.895 0.00 0.00 44.78 5.24
530 531 1.739049 CTTTTTCCTGCCCACGCAA 59.261 52.632 0.00 0.00 46.66 4.85
531 532 0.597377 CTTTTTCCTGCCCACGCAAC 60.597 55.000 0.00 0.00 46.66 4.17
532 533 1.040339 TTTTTCCTGCCCACGCAACT 61.040 50.000 0.00 0.00 46.66 3.16
533 534 1.452145 TTTTCCTGCCCACGCAACTC 61.452 55.000 0.00 0.00 46.66 3.01
534 535 3.842925 TTCCTGCCCACGCAACTCC 62.843 63.158 0.00 0.00 46.66 3.85
535 536 4.335647 CCTGCCCACGCAACTCCT 62.336 66.667 0.00 0.00 46.66 3.69
536 537 2.281761 CTGCCCACGCAACTCCTT 60.282 61.111 0.00 0.00 46.66 3.36
537 538 1.898574 CTGCCCACGCAACTCCTTT 60.899 57.895 0.00 0.00 46.66 3.11
538 539 1.454847 TGCCCACGCAACTCCTTTT 60.455 52.632 0.00 0.00 43.74 2.27
539 540 1.007387 GCCCACGCAACTCCTTTTG 60.007 57.895 0.00 0.00 34.03 2.44
540 541 1.734388 GCCCACGCAACTCCTTTTGT 61.734 55.000 0.00 0.00 34.03 2.83
541 542 0.030638 CCCACGCAACTCCTTTTGTG 59.969 55.000 0.00 0.00 41.80 3.33
543 544 1.134175 CCACGCAACTCCTTTTGTGTT 59.866 47.619 0.00 0.00 45.74 3.32
544 545 2.184448 CACGCAACTCCTTTTGTGTTG 58.816 47.619 0.00 0.00 45.74 3.33
545 546 2.088423 ACGCAACTCCTTTTGTGTTGA 58.912 42.857 10.32 0.00 45.74 3.18
546 547 2.687935 ACGCAACTCCTTTTGTGTTGAT 59.312 40.909 10.32 0.00 45.74 2.57
547 548 3.044986 CGCAACTCCTTTTGTGTTGATG 58.955 45.455 10.32 0.37 42.35 3.07
548 549 3.383761 GCAACTCCTTTTGTGTTGATGG 58.616 45.455 10.32 0.00 42.35 3.51
549 550 3.068024 GCAACTCCTTTTGTGTTGATGGA 59.932 43.478 10.32 0.00 42.35 3.41
550 551 4.794003 GCAACTCCTTTTGTGTTGATGGAG 60.794 45.833 10.32 0.00 42.35 3.86
551 552 3.490348 ACTCCTTTTGTGTTGATGGAGG 58.510 45.455 10.93 0.00 43.70 4.30
552 553 3.138283 ACTCCTTTTGTGTTGATGGAGGA 59.862 43.478 10.93 0.00 43.70 3.71
553 554 3.486383 TCCTTTTGTGTTGATGGAGGAC 58.514 45.455 0.00 0.00 0.00 3.85
554 555 3.117701 TCCTTTTGTGTTGATGGAGGACA 60.118 43.478 0.00 0.00 0.00 4.02
555 556 3.636300 CCTTTTGTGTTGATGGAGGACAA 59.364 43.478 0.00 0.00 0.00 3.18
556 557 4.261741 CCTTTTGTGTTGATGGAGGACAAG 60.262 45.833 0.00 0.00 0.00 3.16
557 558 2.566833 TGTGTTGATGGAGGACAAGG 57.433 50.000 0.00 0.00 0.00 3.61
558 559 1.073763 TGTGTTGATGGAGGACAAGGG 59.926 52.381 0.00 0.00 0.00 3.95
559 560 0.698238 TGTTGATGGAGGACAAGGGG 59.302 55.000 0.00 0.00 0.00 4.79
560 561 0.034089 GTTGATGGAGGACAAGGGGG 60.034 60.000 0.00 0.00 0.00 5.40
561 562 0.477597 TTGATGGAGGACAAGGGGGT 60.478 55.000 0.00 0.00 0.00 4.95
562 563 0.914417 TGATGGAGGACAAGGGGGTC 60.914 60.000 0.00 0.00 37.06 4.46
563 564 0.914417 GATGGAGGACAAGGGGGTCA 60.914 60.000 0.00 0.00 39.59 4.02
564 565 0.253820 ATGGAGGACAAGGGGGTCAT 60.254 55.000 0.00 0.00 39.59 3.06
565 566 1.207488 TGGAGGACAAGGGGGTCATG 61.207 60.000 0.00 0.00 39.59 3.07
566 567 1.609783 GAGGACAAGGGGGTCATGG 59.390 63.158 0.00 0.00 39.59 3.66
567 568 1.151587 AGGACAAGGGGGTCATGGT 60.152 57.895 0.00 0.00 39.59 3.55
568 569 1.208165 AGGACAAGGGGGTCATGGTC 61.208 60.000 0.00 0.00 39.59 4.02
569 570 1.497309 GGACAAGGGGGTCATGGTCA 61.497 60.000 0.00 0.00 39.59 4.02
570 571 0.035056 GACAAGGGGGTCATGGTCAG 60.035 60.000 0.00 0.00 37.73 3.51
571 572 1.379044 CAAGGGGGTCATGGTCAGC 60.379 63.158 0.00 0.00 0.00 4.26
572 573 1.852157 AAGGGGGTCATGGTCAGCA 60.852 57.895 0.00 0.00 0.00 4.41
573 574 1.434513 AAGGGGGTCATGGTCAGCAA 61.435 55.000 0.00 0.00 0.00 3.91
574 575 1.379044 GGGGGTCATGGTCAGCAAG 60.379 63.158 0.00 0.00 0.00 4.01
575 576 1.379044 GGGGTCATGGTCAGCAAGG 60.379 63.158 0.00 0.00 0.00 3.61
576 577 2.048603 GGGTCATGGTCAGCAAGGC 61.049 63.158 0.00 0.00 0.00 4.35
577 578 2.401766 GGTCATGGTCAGCAAGGCG 61.402 63.158 0.00 0.00 0.00 5.52
578 579 1.672356 GTCATGGTCAGCAAGGCGT 60.672 57.895 0.00 0.00 0.00 5.68
579 580 1.073025 TCATGGTCAGCAAGGCGTT 59.927 52.632 0.00 0.00 0.00 4.84
580 581 1.210931 CATGGTCAGCAAGGCGTTG 59.789 57.895 14.70 14.70 36.67 4.10
581 582 1.228245 ATGGTCAGCAAGGCGTTGT 60.228 52.632 19.45 4.92 35.92 3.32
582 583 1.237285 ATGGTCAGCAAGGCGTTGTC 61.237 55.000 19.45 12.09 35.92 3.18
583 584 2.551270 GTCAGCAAGGCGTTGTCG 59.449 61.111 19.45 11.36 35.92 4.35
584 585 1.954146 GTCAGCAAGGCGTTGTCGA 60.954 57.895 19.45 13.31 39.71 4.20
585 586 1.664649 TCAGCAAGGCGTTGTCGAG 60.665 57.895 19.45 10.43 39.71 4.04
586 587 1.664649 CAGCAAGGCGTTGTCGAGA 60.665 57.895 19.45 0.00 39.71 4.04
587 588 1.373497 AGCAAGGCGTTGTCGAGAG 60.373 57.895 19.45 0.00 39.71 3.20
588 589 2.383527 GCAAGGCGTTGTCGAGAGG 61.384 63.158 19.45 0.00 39.71 3.69
589 590 1.738099 CAAGGCGTTGTCGAGAGGG 60.738 63.158 10.97 0.00 39.71 4.30
590 591 3.591254 AAGGCGTTGTCGAGAGGGC 62.591 63.158 6.82 6.82 39.71 5.19
593 594 4.717629 CGTTGTCGAGAGGGCGCA 62.718 66.667 10.83 0.00 39.71 6.09
594 595 2.357034 GTTGTCGAGAGGGCGCAA 60.357 61.111 10.83 0.00 0.00 4.85
595 596 2.048222 TTGTCGAGAGGGCGCAAG 60.048 61.111 10.83 0.00 43.44 4.01
596 597 3.589654 TTGTCGAGAGGGCGCAAGG 62.590 63.158 10.83 0.00 38.28 3.61
597 598 4.070552 GTCGAGAGGGCGCAAGGT 62.071 66.667 10.83 0.00 38.28 3.50
598 599 4.069232 TCGAGAGGGCGCAAGGTG 62.069 66.667 10.83 0.00 38.28 4.00
599 600 4.379243 CGAGAGGGCGCAAGGTGT 62.379 66.667 10.83 0.00 38.28 4.16
600 601 2.743928 GAGAGGGCGCAAGGTGTG 60.744 66.667 10.83 0.00 38.28 3.82
601 602 4.335647 AGAGGGCGCAAGGTGTGG 62.336 66.667 10.83 0.00 38.28 4.17
602 603 4.643387 GAGGGCGCAAGGTGTGGT 62.643 66.667 10.83 0.00 38.28 4.16
603 604 4.204028 AGGGCGCAAGGTGTGGTT 62.204 61.111 10.83 0.00 38.28 3.67
604 605 3.977244 GGGCGCAAGGTGTGGTTG 61.977 66.667 10.83 0.00 38.28 3.77
605 606 2.904866 GGCGCAAGGTGTGGTTGA 60.905 61.111 10.83 0.00 38.28 3.18
606 607 2.639286 GCGCAAGGTGTGGTTGAG 59.361 61.111 0.30 0.00 38.28 3.02
607 608 2.908073 GCGCAAGGTGTGGTTGAGG 61.908 63.158 0.30 0.00 38.28 3.86
608 609 1.227823 CGCAAGGTGTGGTTGAGGA 60.228 57.895 0.00 0.00 0.00 3.71
609 610 1.507141 CGCAAGGTGTGGTTGAGGAC 61.507 60.000 0.00 0.00 0.00 3.85
806 830 3.054434 CCCCTGATTCTACATGGTGTCAA 60.054 47.826 0.00 0.00 0.00 3.18
865 889 2.441717 TGGTTGTGCTTGCTGGCA 60.442 55.556 0.33 0.33 40.15 4.92
2499 2835 2.028130 CTAGGTCTGGTGCTAGTCCTG 58.972 57.143 10.51 7.01 36.95 3.86
2740 3076 2.902486 ACTCTGATGTGTGGACATGTCT 59.098 45.455 24.50 4.18 43.22 3.41
2750 3086 3.380004 TGTGGACATGTCTTGTTGTTTCC 59.620 43.478 24.50 5.90 39.18 3.13
2963 3299 1.271597 GGAGGTTTCCTGTCAGCACAT 60.272 52.381 0.00 0.00 40.58 3.21
3083 3421 3.133542 TGTTCACCATGAATGTGCCAAAA 59.866 39.130 0.00 0.00 38.79 2.44
3255 3593 1.547820 GAGATCACAGACCAGCAGTGA 59.452 52.381 0.00 0.00 45.41 3.41
3324 3662 1.669437 GGGCAGCGAGGCTATAAGC 60.669 63.158 5.80 0.00 43.56 3.09
3354 3692 0.039256 TGCTGAAAGGCGCACATTTC 60.039 50.000 19.25 19.25 36.24 2.17
3439 3777 5.609088 CACTTTATTCGAAGAACTTGACCG 58.391 41.667 4.39 0.00 45.90 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.642686 ACTCTCGCTCAACACTATTAACTC 58.357 41.667 0.00 0.00 0.00 3.01
41 42 5.646577 ACTCTCGCTCAACACTATTAACT 57.353 39.130 0.00 0.00 0.00 2.24
42 43 7.807687 TTAACTCTCGCTCAACACTATTAAC 57.192 36.000 0.00 0.00 0.00 2.01
43 44 8.869897 CAATTAACTCTCGCTCAACACTATTAA 58.130 33.333 0.00 0.00 0.00 1.40
44 45 7.010183 GCAATTAACTCTCGCTCAACACTATTA 59.990 37.037 0.00 0.00 0.00 0.98
45 46 6.183360 GCAATTAACTCTCGCTCAACACTATT 60.183 38.462 0.00 0.00 0.00 1.73
46 47 5.292101 GCAATTAACTCTCGCTCAACACTAT 59.708 40.000 0.00 0.00 0.00 2.12
47 48 4.625742 GCAATTAACTCTCGCTCAACACTA 59.374 41.667 0.00 0.00 0.00 2.74
48 49 3.433615 GCAATTAACTCTCGCTCAACACT 59.566 43.478 0.00 0.00 0.00 3.55
49 50 3.433615 AGCAATTAACTCTCGCTCAACAC 59.566 43.478 0.00 0.00 0.00 3.32
50 51 3.664107 AGCAATTAACTCTCGCTCAACA 58.336 40.909 0.00 0.00 0.00 3.33
51 52 4.251960 GAGCAATTAACTCTCGCTCAAC 57.748 45.455 4.90 0.00 46.55 3.18
55 56 3.876274 TCTGAGCAATTAACTCTCGCT 57.124 42.857 8.63 0.00 35.12 4.93
56 57 3.062774 GGTTCTGAGCAATTAACTCTCGC 59.937 47.826 8.63 0.00 35.12 5.03
57 58 4.092091 GTGGTTCTGAGCAATTAACTCTCG 59.908 45.833 8.63 1.98 34.60 4.04
58 59 4.393371 GGTGGTTCTGAGCAATTAACTCTC 59.607 45.833 8.63 0.83 34.60 3.20
59 60 4.202461 TGGTGGTTCTGAGCAATTAACTCT 60.202 41.667 8.63 0.00 34.60 3.24
103 104 7.206687 TGAATTTTGTCAGAATTGGTGGTTAC 58.793 34.615 6.09 0.00 0.00 2.50
104 105 7.353414 TGAATTTTGTCAGAATTGGTGGTTA 57.647 32.000 6.09 0.00 0.00 2.85
105 106 6.232581 TGAATTTTGTCAGAATTGGTGGTT 57.767 33.333 6.09 0.00 0.00 3.67
106 107 5.867903 TGAATTTTGTCAGAATTGGTGGT 57.132 34.783 6.09 0.00 0.00 4.16
107 108 8.830201 TTATTGAATTTTGTCAGAATTGGTGG 57.170 30.769 6.09 0.00 0.00 4.61
115 116 9.658799 TGGTTGTTTTTATTGAATTTTGTCAGA 57.341 25.926 0.00 0.00 0.00 3.27
116 117 9.701355 GTGGTTGTTTTTATTGAATTTTGTCAG 57.299 29.630 0.00 0.00 0.00 3.51
117 118 9.442047 AGTGGTTGTTTTTATTGAATTTTGTCA 57.558 25.926 0.00 0.00 0.00 3.58
122 123 9.883142 TCTGAAGTGGTTGTTTTTATTGAATTT 57.117 25.926 0.00 0.00 0.00 1.82
123 124 9.533253 CTCTGAAGTGGTTGTTTTTATTGAATT 57.467 29.630 0.00 0.00 0.00 2.17
124 125 8.143835 CCTCTGAAGTGGTTGTTTTTATTGAAT 58.856 33.333 0.00 0.00 0.00 2.57
125 126 7.488322 CCTCTGAAGTGGTTGTTTTTATTGAA 58.512 34.615 0.00 0.00 0.00 2.69
126 127 6.460953 GCCTCTGAAGTGGTTGTTTTTATTGA 60.461 38.462 0.73 0.00 0.00 2.57
127 128 5.691754 GCCTCTGAAGTGGTTGTTTTTATTG 59.308 40.000 0.73 0.00 0.00 1.90
128 129 5.221441 GGCCTCTGAAGTGGTTGTTTTTATT 60.221 40.000 0.00 0.00 0.00 1.40
129 130 4.280929 GGCCTCTGAAGTGGTTGTTTTTAT 59.719 41.667 0.00 0.00 0.00 1.40
130 131 3.634910 GGCCTCTGAAGTGGTTGTTTTTA 59.365 43.478 0.00 0.00 0.00 1.52
131 132 2.430694 GGCCTCTGAAGTGGTTGTTTTT 59.569 45.455 0.00 0.00 0.00 1.94
132 133 2.031870 GGCCTCTGAAGTGGTTGTTTT 58.968 47.619 0.00 0.00 0.00 2.43
133 134 1.692411 GGCCTCTGAAGTGGTTGTTT 58.308 50.000 0.00 0.00 0.00 2.83
134 135 0.535102 CGGCCTCTGAAGTGGTTGTT 60.535 55.000 0.00 0.00 0.00 2.83
135 136 1.071471 CGGCCTCTGAAGTGGTTGT 59.929 57.895 0.00 0.00 0.00 3.32
136 137 0.036010 ATCGGCCTCTGAAGTGGTTG 60.036 55.000 0.00 0.00 0.00 3.77
137 138 0.036010 CATCGGCCTCTGAAGTGGTT 60.036 55.000 0.00 0.00 0.00 3.67
138 139 0.904865 TCATCGGCCTCTGAAGTGGT 60.905 55.000 0.00 0.00 0.00 4.16
139 140 0.179089 CTCATCGGCCTCTGAAGTGG 60.179 60.000 0.00 0.00 0.00 4.00
140 141 0.534412 ACTCATCGGCCTCTGAAGTG 59.466 55.000 0.00 0.00 0.00 3.16
141 142 2.145397 TACTCATCGGCCTCTGAAGT 57.855 50.000 0.00 6.49 0.00 3.01
142 143 2.166459 TGTTACTCATCGGCCTCTGAAG 59.834 50.000 0.00 0.88 0.00 3.02
143 144 2.176045 TGTTACTCATCGGCCTCTGAA 58.824 47.619 0.00 0.00 0.00 3.02
144 145 1.847328 TGTTACTCATCGGCCTCTGA 58.153 50.000 0.00 2.19 0.00 3.27
145 146 2.672961 TTGTTACTCATCGGCCTCTG 57.327 50.000 0.00 0.00 0.00 3.35
146 147 3.914426 ATTTGTTACTCATCGGCCTCT 57.086 42.857 0.00 0.00 0.00 3.69
147 148 4.873827 TGTTATTTGTTACTCATCGGCCTC 59.126 41.667 0.00 0.00 0.00 4.70
148 149 4.634443 GTGTTATTTGTTACTCATCGGCCT 59.366 41.667 0.00 0.00 0.00 5.19
149 150 4.634443 AGTGTTATTTGTTACTCATCGGCC 59.366 41.667 0.00 0.00 0.00 6.13
150 151 5.350365 TCAGTGTTATTTGTTACTCATCGGC 59.650 40.000 0.00 0.00 0.00 5.54
151 152 6.961359 TCAGTGTTATTTGTTACTCATCGG 57.039 37.500 0.00 0.00 0.00 4.18
152 153 8.655970 TGAATCAGTGTTATTTGTTACTCATCG 58.344 33.333 0.00 0.00 0.00 3.84
155 156 8.729756 CCATGAATCAGTGTTATTTGTTACTCA 58.270 33.333 0.00 0.00 0.00 3.41
156 157 8.946085 TCCATGAATCAGTGTTATTTGTTACTC 58.054 33.333 0.00 0.00 0.00 2.59
157 158 8.862325 TCCATGAATCAGTGTTATTTGTTACT 57.138 30.769 0.00 0.00 0.00 2.24
161 162 8.408601 GCTAATCCATGAATCAGTGTTATTTGT 58.591 33.333 0.00 0.00 0.00 2.83
162 163 8.627403 AGCTAATCCATGAATCAGTGTTATTTG 58.373 33.333 0.00 0.00 0.00 2.32
163 164 8.757982 AGCTAATCCATGAATCAGTGTTATTT 57.242 30.769 0.00 0.00 0.00 1.40
164 165 7.172190 CGAGCTAATCCATGAATCAGTGTTATT 59.828 37.037 0.00 0.00 0.00 1.40
165 166 6.648310 CGAGCTAATCCATGAATCAGTGTTAT 59.352 38.462 0.00 0.00 0.00 1.89
166 167 5.985530 CGAGCTAATCCATGAATCAGTGTTA 59.014 40.000 0.00 0.00 0.00 2.41
167 168 4.813161 CGAGCTAATCCATGAATCAGTGTT 59.187 41.667 0.00 0.00 0.00 3.32
168 169 4.375272 CGAGCTAATCCATGAATCAGTGT 58.625 43.478 0.00 0.00 0.00 3.55
169 170 3.744942 CCGAGCTAATCCATGAATCAGTG 59.255 47.826 0.00 0.00 0.00 3.66
170 171 3.643320 TCCGAGCTAATCCATGAATCAGT 59.357 43.478 0.00 0.00 0.00 3.41
171 172 3.993081 GTCCGAGCTAATCCATGAATCAG 59.007 47.826 0.00 0.00 0.00 2.90
172 173 3.387699 TGTCCGAGCTAATCCATGAATCA 59.612 43.478 0.00 0.00 0.00 2.57
173 174 3.995199 TGTCCGAGCTAATCCATGAATC 58.005 45.455 0.00 0.00 0.00 2.52
174 175 4.422073 TTGTCCGAGCTAATCCATGAAT 57.578 40.909 0.00 0.00 0.00 2.57
175 176 3.904800 TTGTCCGAGCTAATCCATGAA 57.095 42.857 0.00 0.00 0.00 2.57
176 177 3.055458 TGTTTGTCCGAGCTAATCCATGA 60.055 43.478 0.00 0.00 0.00 3.07
177 178 3.270027 TGTTTGTCCGAGCTAATCCATG 58.730 45.455 0.00 0.00 0.00 3.66
178 179 3.535561 CTGTTTGTCCGAGCTAATCCAT 58.464 45.455 0.00 0.00 0.00 3.41
179 180 2.935238 GCTGTTTGTCCGAGCTAATCCA 60.935 50.000 0.00 0.00 0.00 3.41
180 181 1.666189 GCTGTTTGTCCGAGCTAATCC 59.334 52.381 0.00 0.00 0.00 3.01
181 182 2.346803 TGCTGTTTGTCCGAGCTAATC 58.653 47.619 0.00 0.00 33.66 1.75
182 183 2.472695 TGCTGTTTGTCCGAGCTAAT 57.527 45.000 0.00 0.00 33.66 1.73
183 184 2.248280 TTGCTGTTTGTCCGAGCTAA 57.752 45.000 0.00 0.00 33.66 3.09
184 185 2.248280 TTTGCTGTTTGTCCGAGCTA 57.752 45.000 0.00 0.00 33.66 3.32
185 186 1.065551 GTTTTGCTGTTTGTCCGAGCT 59.934 47.619 0.00 0.00 33.66 4.09
186 187 1.065551 AGTTTTGCTGTTTGTCCGAGC 59.934 47.619 0.00 0.00 0.00 5.03
187 188 2.354510 TCAGTTTTGCTGTTTGTCCGAG 59.645 45.455 0.00 0.00 45.23 4.63
188 189 2.360844 TCAGTTTTGCTGTTTGTCCGA 58.639 42.857 0.00 0.00 45.23 4.55
189 190 2.842208 TCAGTTTTGCTGTTTGTCCG 57.158 45.000 0.00 0.00 45.23 4.79
190 191 3.803778 CCAATCAGTTTTGCTGTTTGTCC 59.196 43.478 13.53 0.00 46.07 4.02
191 192 3.245990 GCCAATCAGTTTTGCTGTTTGTC 59.754 43.478 13.53 1.96 46.07 3.18
192 193 3.197265 GCCAATCAGTTTTGCTGTTTGT 58.803 40.909 13.53 0.00 46.07 2.83
193 194 3.196463 TGCCAATCAGTTTTGCTGTTTG 58.804 40.909 9.71 9.71 46.60 2.93
194 195 3.460103 CTGCCAATCAGTTTTGCTGTTT 58.540 40.909 0.00 0.00 45.23 2.83
195 196 2.224113 CCTGCCAATCAGTTTTGCTGTT 60.224 45.455 0.00 0.00 45.23 3.16
196 197 1.342174 CCTGCCAATCAGTTTTGCTGT 59.658 47.619 0.00 0.00 45.23 4.40
197 198 1.614903 TCCTGCCAATCAGTTTTGCTG 59.385 47.619 0.00 0.00 46.34 4.41
198 199 1.615392 GTCCTGCCAATCAGTTTTGCT 59.385 47.619 0.00 0.00 41.25 3.91
199 200 1.337167 GGTCCTGCCAATCAGTTTTGC 60.337 52.381 0.00 0.00 41.25 3.68
200 201 1.273327 GGGTCCTGCCAATCAGTTTTG 59.727 52.381 0.00 0.00 41.25 2.44
201 202 1.133199 TGGGTCCTGCCAATCAGTTTT 60.133 47.619 0.00 0.00 41.25 2.43
202 203 0.482446 TGGGTCCTGCCAATCAGTTT 59.518 50.000 0.00 0.00 41.25 2.66
203 204 0.251341 GTGGGTCCTGCCAATCAGTT 60.251 55.000 0.00 0.00 41.25 3.16
204 205 1.380302 GTGGGTCCTGCCAATCAGT 59.620 57.895 0.00 0.00 41.25 3.41
205 206 1.379044 GGTGGGTCCTGCCAATCAG 60.379 63.158 0.00 0.00 42.49 2.90
206 207 2.763215 GGTGGGTCCTGCCAATCA 59.237 61.111 0.00 0.00 39.65 2.57
207 208 2.043953 GGGTGGGTCCTGCCAATC 60.044 66.667 4.97 0.00 39.65 2.67
208 209 4.047125 CGGGTGGGTCCTGCCAAT 62.047 66.667 4.97 0.00 39.65 3.16
214 215 4.296729 AGTCGACGGGTGGGTCCT 62.297 66.667 10.46 0.00 36.25 3.85
215 216 4.065281 CAGTCGACGGGTGGGTCC 62.065 72.222 10.46 0.00 33.30 4.46
216 217 2.987547 TCAGTCGACGGGTGGGTC 60.988 66.667 15.78 0.00 0.00 4.46
217 218 3.300765 GTCAGTCGACGGGTGGGT 61.301 66.667 15.78 0.00 31.07 4.51
218 219 3.299977 TGTCAGTCGACGGGTGGG 61.300 66.667 15.78 0.48 45.80 4.61
219 220 2.049433 GTGTCAGTCGACGGGTGG 60.049 66.667 15.78 2.22 45.80 4.61
220 221 2.428569 CGTGTCAGTCGACGGGTG 60.429 66.667 15.78 6.41 45.80 4.61
221 222 4.338539 GCGTGTCAGTCGACGGGT 62.339 66.667 15.78 0.00 45.80 5.28
222 223 3.626680 ATGCGTGTCAGTCGACGGG 62.627 63.158 15.78 9.74 45.80 5.28
223 224 2.126463 ATGCGTGTCAGTCGACGG 60.126 61.111 10.46 10.03 45.80 4.79
224 225 3.059472 GCATGCGTGTCAGTCGACG 62.059 63.158 10.46 5.48 45.80 5.12
225 226 1.284982 AAGCATGCGTGTCAGTCGAC 61.285 55.000 13.01 7.70 42.93 4.20
226 227 0.242555 TAAGCATGCGTGTCAGTCGA 59.757 50.000 16.84 0.00 0.00 4.20
227 228 1.005662 CATAAGCATGCGTGTCAGTCG 60.006 52.381 16.84 0.00 0.00 4.18
228 229 2.002586 ACATAAGCATGCGTGTCAGTC 58.997 47.619 16.84 0.00 35.39 3.51
229 230 1.733912 CACATAAGCATGCGTGTCAGT 59.266 47.619 16.84 7.03 35.39 3.41
230 231 1.733912 ACACATAAGCATGCGTGTCAG 59.266 47.619 19.42 13.48 38.13 3.51
231 232 1.807139 ACACATAAGCATGCGTGTCA 58.193 45.000 19.42 0.44 38.13 3.58
232 233 2.670905 TGTACACATAAGCATGCGTGTC 59.329 45.455 25.78 18.85 41.49 3.67
233 234 2.415168 GTGTACACATAAGCATGCGTGT 59.585 45.455 25.46 25.46 44.40 4.49
234 235 2.672874 AGTGTACACATAAGCATGCGTG 59.327 45.455 27.06 17.68 35.39 5.34
235 236 2.972625 AGTGTACACATAAGCATGCGT 58.027 42.857 27.06 12.35 35.39 5.24
236 237 4.340894 AAAGTGTACACATAAGCATGCG 57.659 40.909 27.06 0.00 35.39 4.73
237 238 6.027749 GGTAAAAGTGTACACATAAGCATGC 58.972 40.000 27.06 10.51 35.39 4.06
238 239 6.150307 TGGGTAAAAGTGTACACATAAGCATG 59.850 38.462 27.06 0.00 32.38 4.06
239 240 6.150474 GTGGGTAAAAGTGTACACATAAGCAT 59.850 38.462 27.06 8.81 39.52 3.79
240 241 5.470777 GTGGGTAAAAGTGTACACATAAGCA 59.529 40.000 27.06 5.00 39.52 3.91
241 242 5.106436 GGTGGGTAAAAGTGTACACATAAGC 60.106 44.000 27.06 17.19 39.52 3.09
242 243 6.235664 AGGTGGGTAAAAGTGTACACATAAG 58.764 40.000 27.06 0.00 39.52 1.73
243 244 6.190346 AGGTGGGTAAAAGTGTACACATAA 57.810 37.500 27.06 7.45 39.52 1.90
244 245 5.829062 AGGTGGGTAAAAGTGTACACATA 57.171 39.130 27.06 14.12 39.52 2.29
245 246 4.717279 AGGTGGGTAAAAGTGTACACAT 57.283 40.909 27.06 13.66 39.52 3.21
246 247 4.506937 AAGGTGGGTAAAAGTGTACACA 57.493 40.909 27.06 4.12 34.99 3.72
247 248 4.276678 GGAAAGGTGGGTAAAAGTGTACAC 59.723 45.833 18.56 18.56 0.00 2.90
248 249 4.463070 GGAAAGGTGGGTAAAAGTGTACA 58.537 43.478 0.00 0.00 0.00 2.90
249 250 3.822735 GGGAAAGGTGGGTAAAAGTGTAC 59.177 47.826 0.00 0.00 0.00 2.90
250 251 3.181430 GGGGAAAGGTGGGTAAAAGTGTA 60.181 47.826 0.00 0.00 0.00 2.90
251 252 2.425247 GGGGAAAGGTGGGTAAAAGTGT 60.425 50.000 0.00 0.00 0.00 3.55
252 253 2.158370 AGGGGAAAGGTGGGTAAAAGTG 60.158 50.000 0.00 0.00 0.00 3.16
253 254 2.149556 AGGGGAAAGGTGGGTAAAAGT 58.850 47.619 0.00 0.00 0.00 2.66
254 255 2.992847 AGGGGAAAGGTGGGTAAAAG 57.007 50.000 0.00 0.00 0.00 2.27
255 256 3.710086 AAAGGGGAAAGGTGGGTAAAA 57.290 42.857 0.00 0.00 0.00 1.52
256 257 3.710086 AAAAGGGGAAAGGTGGGTAAA 57.290 42.857 0.00 0.00 0.00 2.01
257 258 3.208005 AGAAAAAGGGGAAAGGTGGGTAA 59.792 43.478 0.00 0.00 0.00 2.85
258 259 2.792967 AGAAAAAGGGGAAAGGTGGGTA 59.207 45.455 0.00 0.00 0.00 3.69
259 260 1.578703 AGAAAAAGGGGAAAGGTGGGT 59.421 47.619 0.00 0.00 0.00 4.51
260 261 2.248248 GAGAAAAAGGGGAAAGGTGGG 58.752 52.381 0.00 0.00 0.00 4.61
261 262 2.158310 AGGAGAAAAAGGGGAAAGGTGG 60.158 50.000 0.00 0.00 0.00 4.61
262 263 3.157881 GAGGAGAAAAAGGGGAAAGGTG 58.842 50.000 0.00 0.00 0.00 4.00
263 264 3.064412 AGAGGAGAAAAAGGGGAAAGGT 58.936 45.455 0.00 0.00 0.00 3.50
264 265 3.332187 AGAGAGGAGAAAAAGGGGAAAGG 59.668 47.826 0.00 0.00 0.00 3.11
265 266 4.288366 AGAGAGAGGAGAAAAAGGGGAAAG 59.712 45.833 0.00 0.00 0.00 2.62
266 267 4.243643 AGAGAGAGGAGAAAAAGGGGAAA 58.756 43.478 0.00 0.00 0.00 3.13
267 268 3.841255 GAGAGAGAGGAGAAAAAGGGGAA 59.159 47.826 0.00 0.00 0.00 3.97
268 269 3.445987 GAGAGAGAGGAGAAAAAGGGGA 58.554 50.000 0.00 0.00 0.00 4.81
269 270 2.503765 GGAGAGAGAGGAGAAAAAGGGG 59.496 54.545 0.00 0.00 0.00 4.79
270 271 2.503765 GGGAGAGAGAGGAGAAAAAGGG 59.496 54.545 0.00 0.00 0.00 3.95
271 272 3.449918 AGGGAGAGAGAGGAGAAAAAGG 58.550 50.000 0.00 0.00 0.00 3.11
272 273 4.352893 AGAGGGAGAGAGAGGAGAAAAAG 58.647 47.826 0.00 0.00 0.00 2.27
273 274 4.349365 GAGAGGGAGAGAGAGGAGAAAAA 58.651 47.826 0.00 0.00 0.00 1.94
274 275 3.309556 GGAGAGGGAGAGAGAGGAGAAAA 60.310 52.174 0.00 0.00 0.00 2.29
275 276 2.243736 GGAGAGGGAGAGAGAGGAGAAA 59.756 54.545 0.00 0.00 0.00 2.52
276 277 1.850345 GGAGAGGGAGAGAGAGGAGAA 59.150 57.143 0.00 0.00 0.00 2.87
277 278 1.518367 GGAGAGGGAGAGAGAGGAGA 58.482 60.000 0.00 0.00 0.00 3.71
278 279 0.478507 GGGAGAGGGAGAGAGAGGAG 59.521 65.000 0.00 0.00 0.00 3.69
279 280 0.253868 TGGGAGAGGGAGAGAGAGGA 60.254 60.000 0.00 0.00 0.00 3.71
280 281 0.633921 TTGGGAGAGGGAGAGAGAGG 59.366 60.000 0.00 0.00 0.00 3.69
281 282 2.541233 TTTGGGAGAGGGAGAGAGAG 57.459 55.000 0.00 0.00 0.00 3.20
282 283 2.316067 TGATTTGGGAGAGGGAGAGAGA 59.684 50.000 0.00 0.00 0.00 3.10
283 284 2.756907 TGATTTGGGAGAGGGAGAGAG 58.243 52.381 0.00 0.00 0.00 3.20
284 285 2.948889 TGATTTGGGAGAGGGAGAGA 57.051 50.000 0.00 0.00 0.00 3.10
285 286 2.371510 GGATGATTTGGGAGAGGGAGAG 59.628 54.545 0.00 0.00 0.00 3.20
286 287 2.293788 TGGATGATTTGGGAGAGGGAGA 60.294 50.000 0.00 0.00 0.00 3.71
287 288 2.130193 TGGATGATTTGGGAGAGGGAG 58.870 52.381 0.00 0.00 0.00 4.30
288 289 2.285275 TGGATGATTTGGGAGAGGGA 57.715 50.000 0.00 0.00 0.00 4.20
289 290 2.872732 CATGGATGATTTGGGAGAGGG 58.127 52.381 0.00 0.00 0.00 4.30
290 291 2.236766 GCATGGATGATTTGGGAGAGG 58.763 52.381 0.00 0.00 0.00 3.69
291 292 2.236766 GGCATGGATGATTTGGGAGAG 58.763 52.381 0.00 0.00 0.00 3.20
292 293 1.570024 TGGCATGGATGATTTGGGAGA 59.430 47.619 0.00 0.00 0.00 3.71
293 294 2.076207 TGGCATGGATGATTTGGGAG 57.924 50.000 0.00 0.00 0.00 4.30
294 295 2.321719 CATGGCATGGATGATTTGGGA 58.678 47.619 19.80 0.00 0.00 4.37
295 296 1.270625 GCATGGCATGGATGATTTGGG 60.271 52.381 27.48 0.00 0.00 4.12
296 297 1.270625 GGCATGGCATGGATGATTTGG 60.271 52.381 27.48 0.00 0.00 3.28
297 298 1.604438 CGGCATGGCATGGATGATTTG 60.604 52.381 27.48 1.93 0.00 2.32
298 299 0.677288 CGGCATGGCATGGATGATTT 59.323 50.000 27.48 0.00 0.00 2.17
299 300 1.812686 GCGGCATGGCATGGATGATT 61.813 55.000 27.48 0.00 0.00 2.57
300 301 2.273179 GCGGCATGGCATGGATGAT 61.273 57.895 27.48 0.00 0.00 2.45
301 302 2.908428 GCGGCATGGCATGGATGA 60.908 61.111 27.48 0.00 0.00 2.92
302 303 4.337060 CGCGGCATGGCATGGATG 62.337 66.667 27.48 5.48 0.00 3.51
303 304 3.855503 ATCGCGGCATGGCATGGAT 62.856 57.895 27.48 18.09 0.00 3.41
304 305 4.567488 ATCGCGGCATGGCATGGA 62.567 61.111 27.48 16.69 0.00 3.41
305 306 4.337060 CATCGCGGCATGGCATGG 62.337 66.667 27.48 13.79 0.00 3.66
306 307 4.337060 CCATCGCGGCATGGCATG 62.337 66.667 22.99 22.99 37.12 4.06
307 308 4.567488 TCCATCGCGGCATGGCAT 62.567 61.111 19.28 2.12 42.97 4.40
310 311 4.923942 AGCTCCATCGCGGCATGG 62.924 66.667 18.28 18.28 44.45 3.66
311 312 3.344215 GAGCTCCATCGCGGCATG 61.344 66.667 6.13 3.07 34.40 4.06
312 313 4.957684 CGAGCTCCATCGCGGCAT 62.958 66.667 8.47 0.00 35.66 4.40
316 317 3.893763 AGACCGAGCTCCATCGCG 61.894 66.667 8.47 0.00 41.37 5.87
317 318 2.279120 CAGACCGAGCTCCATCGC 60.279 66.667 8.47 0.00 41.37 4.58
318 319 1.226802 CACAGACCGAGCTCCATCG 60.227 63.158 8.47 0.00 42.36 3.84
319 320 1.520342 GCACAGACCGAGCTCCATC 60.520 63.158 8.47 5.93 0.00 3.51
320 321 2.236223 CTGCACAGACCGAGCTCCAT 62.236 60.000 8.47 0.00 31.61 3.41
321 322 2.917227 TGCACAGACCGAGCTCCA 60.917 61.111 8.47 0.00 31.61 3.86
322 323 2.125753 CTGCACAGACCGAGCTCC 60.126 66.667 8.47 0.00 31.61 4.70
323 324 2.813042 GCTGCACAGACCGAGCTC 60.813 66.667 2.73 2.73 31.61 4.09
324 325 4.385405 GGCTGCACAGACCGAGCT 62.385 66.667 0.50 0.00 31.61 4.09
329 330 4.767255 CCTCCGGCTGCACAGACC 62.767 72.222 0.50 1.66 30.97 3.85
330 331 4.767255 CCCTCCGGCTGCACAGAC 62.767 72.222 0.50 0.00 0.00 3.51
337 338 4.394712 GTGTGTCCCCTCCGGCTG 62.395 72.222 0.00 0.00 0.00 4.85
358 359 3.706373 CTGGTGGTGTCCCCTCGG 61.706 72.222 0.00 0.00 0.00 4.63
359 360 3.706373 CCTGGTGGTGTCCCCTCG 61.706 72.222 0.00 0.00 0.00 4.63
360 361 3.330720 CCCTGGTGGTGTCCCCTC 61.331 72.222 0.00 0.00 0.00 4.30
361 362 3.869934 TCCCTGGTGGTGTCCCCT 61.870 66.667 0.00 0.00 34.77 4.79
362 363 2.758852 TACTCCCTGGTGGTGTCCCC 62.759 65.000 0.00 0.00 41.11 4.81
363 364 1.229400 TACTCCCTGGTGGTGTCCC 60.229 63.158 0.00 0.00 41.11 4.46
364 365 0.252103 TCTACTCCCTGGTGGTGTCC 60.252 60.000 0.00 0.00 41.11 4.02
365 366 1.550976 CTTCTACTCCCTGGTGGTGTC 59.449 57.143 0.00 0.00 41.11 3.67
366 367 1.645710 CTTCTACTCCCTGGTGGTGT 58.354 55.000 0.00 0.00 43.21 4.16
367 368 0.250513 GCTTCTACTCCCTGGTGGTG 59.749 60.000 0.00 0.00 34.77 4.17
368 369 0.910088 GGCTTCTACTCCCTGGTGGT 60.910 60.000 0.00 0.00 34.77 4.16
369 370 0.909610 TGGCTTCTACTCCCTGGTGG 60.910 60.000 0.00 0.00 0.00 4.61
370 371 0.250513 GTGGCTTCTACTCCCTGGTG 59.749 60.000 0.00 0.00 0.00 4.17
371 372 0.910088 GGTGGCTTCTACTCCCTGGT 60.910 60.000 0.00 0.00 0.00 4.00
372 373 0.909610 TGGTGGCTTCTACTCCCTGG 60.910 60.000 0.00 0.00 0.00 4.45
373 374 0.250513 GTGGTGGCTTCTACTCCCTG 59.749 60.000 0.00 0.00 0.00 4.45
374 375 0.910088 GGTGGTGGCTTCTACTCCCT 60.910 60.000 0.00 0.00 0.00 4.20
375 376 1.602771 GGTGGTGGCTTCTACTCCC 59.397 63.158 0.00 0.00 0.00 4.30
376 377 1.218316 CGGTGGTGGCTTCTACTCC 59.782 63.158 0.00 0.00 0.00 3.85
377 378 1.448013 GCGGTGGTGGCTTCTACTC 60.448 63.158 0.00 0.00 0.00 2.59
378 379 2.663196 GCGGTGGTGGCTTCTACT 59.337 61.111 0.00 0.00 0.00 2.57
379 380 2.775032 TTCGCGGTGGTGGCTTCTAC 62.775 60.000 6.13 0.00 0.00 2.59
380 381 2.501223 CTTCGCGGTGGTGGCTTCTA 62.501 60.000 6.13 0.00 0.00 2.10
381 382 3.883744 CTTCGCGGTGGTGGCTTCT 62.884 63.158 6.13 0.00 0.00 2.85
382 383 3.423154 CTTCGCGGTGGTGGCTTC 61.423 66.667 6.13 0.00 0.00 3.86
387 388 2.625823 ATTTGGCTTCGCGGTGGTG 61.626 57.895 6.13 0.00 0.00 4.17
388 389 2.282180 ATTTGGCTTCGCGGTGGT 60.282 55.556 6.13 0.00 0.00 4.16
389 390 2.179018 CATTTGGCTTCGCGGTGG 59.821 61.111 6.13 0.00 0.00 4.61
390 391 2.504681 GCATTTGGCTTCGCGGTG 60.505 61.111 6.13 0.00 40.25 4.94
391 392 3.747976 GGCATTTGGCTTCGCGGT 61.748 61.111 6.13 0.00 44.01 5.68
392 393 4.496927 GGGCATTTGGCTTCGCGG 62.497 66.667 6.13 0.00 44.01 6.46
393 394 4.834892 CGGGCATTTGGCTTCGCG 62.835 66.667 0.00 0.00 44.01 5.87
394 395 3.401243 CTCGGGCATTTGGCTTCGC 62.401 63.158 4.01 0.00 44.01 4.70
395 396 2.793946 CTCGGGCATTTGGCTTCG 59.206 61.111 4.01 0.69 44.01 3.79
396 397 2.491621 GCTCGGGCATTTGGCTTC 59.508 61.111 0.00 0.00 44.01 3.86
397 398 3.070576 GGCTCGGGCATTTGGCTT 61.071 61.111 10.74 0.00 44.01 4.35
398 399 3.667217 ATGGCTCGGGCATTTGGCT 62.667 57.895 10.74 0.00 46.61 4.75
399 400 3.149648 ATGGCTCGGGCATTTGGC 61.150 61.111 10.74 0.00 46.61 4.52
400 401 2.788640 CCATGGCTCGGGCATTTGG 61.789 63.158 10.74 8.97 46.61 3.28
401 402 1.731433 CTCCATGGCTCGGGCATTTG 61.731 60.000 10.74 2.54 46.61 2.32
402 403 1.454479 CTCCATGGCTCGGGCATTT 60.454 57.895 10.74 0.00 46.61 2.32
403 404 2.194056 CTCCATGGCTCGGGCATT 59.806 61.111 10.74 0.00 46.61 3.56
407 408 4.899239 GTCGCTCCATGGCTCGGG 62.899 72.222 20.24 13.47 0.00 5.14
409 410 4.193334 TCGTCGCTCCATGGCTCG 62.193 66.667 6.96 12.83 0.00 5.03
410 411 2.583593 GTCGTCGCTCCATGGCTC 60.584 66.667 6.96 0.00 0.00 4.70
411 412 4.498520 CGTCGTCGCTCCATGGCT 62.499 66.667 6.96 0.00 0.00 4.75
412 413 4.492160 TCGTCGTCGCTCCATGGC 62.492 66.667 6.96 0.00 36.96 4.40
413 414 2.278206 CTCGTCGTCGCTCCATGG 60.278 66.667 4.97 4.97 36.96 3.66
414 415 1.583967 GTCTCGTCGTCGCTCCATG 60.584 63.158 0.00 0.00 36.96 3.66
415 416 1.306642 AAGTCTCGTCGTCGCTCCAT 61.307 55.000 0.00 0.00 36.96 3.41
416 417 1.909141 GAAGTCTCGTCGTCGCTCCA 61.909 60.000 0.00 0.00 36.96 3.86
417 418 1.226073 GAAGTCTCGTCGTCGCTCC 60.226 63.158 0.00 0.00 36.96 4.70
418 419 1.226073 GGAAGTCTCGTCGTCGCTC 60.226 63.158 0.00 0.00 36.96 5.03
419 420 2.868920 GGAAGTCTCGTCGTCGCT 59.131 61.111 0.00 0.00 36.96 4.93
420 421 2.573689 CGGAAGTCTCGTCGTCGC 60.574 66.667 0.00 0.00 36.96 5.19
421 422 2.573689 GCGGAAGTCTCGTCGTCG 60.574 66.667 0.00 0.00 38.55 5.12
422 423 2.202453 GGCGGAAGTCTCGTCGTC 60.202 66.667 0.00 0.00 0.00 4.20
423 424 2.341101 ATGGCGGAAGTCTCGTCGT 61.341 57.895 0.00 0.00 34.67 4.34
424 425 1.874019 CATGGCGGAAGTCTCGTCG 60.874 63.158 0.00 0.00 34.67 5.12
425 426 0.526524 CTCATGGCGGAAGTCTCGTC 60.527 60.000 0.00 0.00 36.07 4.20
426 427 0.965866 TCTCATGGCGGAAGTCTCGT 60.966 55.000 0.00 0.00 36.07 4.18
427 428 0.173481 TTCTCATGGCGGAAGTCTCG 59.827 55.000 0.00 0.00 36.07 4.04
428 429 2.275318 CTTTCTCATGGCGGAAGTCTC 58.725 52.381 0.00 0.00 36.07 3.36
429 430 1.677217 GCTTTCTCATGGCGGAAGTCT 60.677 52.381 0.00 0.00 36.07 3.24
430 431 0.729690 GCTTTCTCATGGCGGAAGTC 59.270 55.000 0.00 0.00 0.00 3.01
431 432 0.678048 GGCTTTCTCATGGCGGAAGT 60.678 55.000 0.00 0.00 0.00 3.01
432 433 1.379642 GGGCTTTCTCATGGCGGAAG 61.380 60.000 0.00 0.00 0.00 3.46
433 434 1.378514 GGGCTTTCTCATGGCGGAA 60.379 57.895 0.00 0.00 0.00 4.30
434 435 2.257409 GAGGGCTTTCTCATGGCGGA 62.257 60.000 0.00 0.00 34.13 5.54
435 436 1.821332 GAGGGCTTTCTCATGGCGG 60.821 63.158 0.00 0.00 34.13 6.13
436 437 1.821332 GGAGGGCTTTCTCATGGCG 60.821 63.158 0.00 0.00 35.58 5.69
437 438 1.821332 CGGAGGGCTTTCTCATGGC 60.821 63.158 0.00 0.00 35.58 4.40
438 439 1.821332 GCGGAGGGCTTTCTCATGG 60.821 63.158 0.00 0.00 39.11 3.66
439 440 1.821332 GGCGGAGGGCTTTCTCATG 60.821 63.158 0.00 0.00 42.94 3.07
440 441 2.592308 GGCGGAGGGCTTTCTCAT 59.408 61.111 0.00 0.00 42.94 2.90
441 442 4.082523 CGGCGGAGGGCTTTCTCA 62.083 66.667 0.00 0.00 42.94 3.27
451 452 3.458163 TTAGTGGAGGCGGCGGAG 61.458 66.667 9.78 0.00 0.00 4.63
452 453 3.766691 GTTAGTGGAGGCGGCGGA 61.767 66.667 9.78 0.00 0.00 5.54
453 454 4.832608 GGTTAGTGGAGGCGGCGG 62.833 72.222 9.78 0.00 0.00 6.13
454 455 4.077184 TGGTTAGTGGAGGCGGCG 62.077 66.667 0.51 0.51 0.00 6.46
455 456 2.436115 GTGGTTAGTGGAGGCGGC 60.436 66.667 0.00 0.00 0.00 6.53
456 457 2.125673 CGTGGTTAGTGGAGGCGG 60.126 66.667 0.00 0.00 0.00 6.13
457 458 2.125673 CCGTGGTTAGTGGAGGCG 60.126 66.667 0.00 0.00 0.00 5.52
458 459 1.079336 GACCGTGGTTAGTGGAGGC 60.079 63.158 0.00 0.00 0.00 4.70
459 460 0.531200 GAGACCGTGGTTAGTGGAGG 59.469 60.000 0.00 0.00 0.00 4.30
460 461 1.473278 GAGAGACCGTGGTTAGTGGAG 59.527 57.143 0.00 0.00 0.00 3.86
461 462 1.542492 GAGAGACCGTGGTTAGTGGA 58.458 55.000 0.00 0.00 0.00 4.02
462 463 0.531200 GGAGAGACCGTGGTTAGTGG 59.469 60.000 0.00 0.00 0.00 4.00
463 464 0.531200 GGGAGAGACCGTGGTTAGTG 59.469 60.000 0.00 0.00 40.11 2.74
464 465 0.614134 GGGGAGAGACCGTGGTTAGT 60.614 60.000 0.00 0.00 40.11 2.24
465 466 0.613853 TGGGGAGAGACCGTGGTTAG 60.614 60.000 0.00 0.00 40.11 2.34
466 467 0.178926 TTGGGGAGAGACCGTGGTTA 60.179 55.000 0.00 0.00 40.11 2.85
467 468 1.460689 TTGGGGAGAGACCGTGGTT 60.461 57.895 0.00 0.00 40.11 3.67
468 469 2.203182 TTGGGGAGAGACCGTGGT 59.797 61.111 0.00 0.00 40.11 4.16
469 470 1.889530 GAGTTGGGGAGAGACCGTGG 61.890 65.000 0.00 0.00 40.11 4.94
470 471 1.592223 GAGTTGGGGAGAGACCGTG 59.408 63.158 0.00 0.00 40.11 4.94
471 472 1.609794 GGAGTTGGGGAGAGACCGT 60.610 63.158 0.00 0.00 40.11 4.83
472 473 0.978146 ATGGAGTTGGGGAGAGACCG 60.978 60.000 0.00 0.00 40.11 4.79
473 474 1.290134 AATGGAGTTGGGGAGAGACC 58.710 55.000 0.00 0.00 38.08 3.85
474 475 2.356227 GGAAATGGAGTTGGGGAGAGAC 60.356 54.545 0.00 0.00 0.00 3.36
475 476 1.916181 GGAAATGGAGTTGGGGAGAGA 59.084 52.381 0.00 0.00 0.00 3.10
476 477 1.064389 GGGAAATGGAGTTGGGGAGAG 60.064 57.143 0.00 0.00 0.00 3.20
477 478 0.999712 GGGAAATGGAGTTGGGGAGA 59.000 55.000 0.00 0.00 0.00 3.71
478 479 0.033109 GGGGAAATGGAGTTGGGGAG 60.033 60.000 0.00 0.00 0.00 4.30
479 480 1.514864 GGGGGAAATGGAGTTGGGGA 61.515 60.000 0.00 0.00 0.00 4.81
480 481 1.001631 GGGGGAAATGGAGTTGGGG 59.998 63.158 0.00 0.00 0.00 4.96
481 482 1.379843 CGGGGGAAATGGAGTTGGG 60.380 63.158 0.00 0.00 0.00 4.12
482 483 2.052104 GCGGGGGAAATGGAGTTGG 61.052 63.158 0.00 0.00 0.00 3.77
483 484 0.684153 ATGCGGGGGAAATGGAGTTG 60.684 55.000 0.00 0.00 0.00 3.16
484 485 0.684153 CATGCGGGGGAAATGGAGTT 60.684 55.000 0.00 0.00 0.00 3.01
485 486 1.076777 CATGCGGGGGAAATGGAGT 60.077 57.895 0.00 0.00 0.00 3.85
486 487 1.076777 ACATGCGGGGGAAATGGAG 60.077 57.895 0.00 0.00 0.00 3.86
487 488 1.379710 CACATGCGGGGGAAATGGA 60.380 57.895 0.00 0.00 0.00 3.41
488 489 3.080045 GCACATGCGGGGGAAATGG 62.080 63.158 0.00 0.00 0.00 3.16
489 490 1.678598 ATGCACATGCGGGGGAAATG 61.679 55.000 0.00 0.00 45.83 2.32
490 491 1.381599 ATGCACATGCGGGGGAAAT 60.382 52.632 0.00 0.00 45.83 2.17
491 492 2.037049 ATGCACATGCGGGGGAAA 59.963 55.556 0.00 0.00 45.83 3.13
492 493 2.440065 GATGCACATGCGGGGGAA 60.440 61.111 0.00 0.00 45.83 3.97
493 494 4.504596 GGATGCACATGCGGGGGA 62.505 66.667 0.00 0.00 45.83 4.81
496 497 4.511246 AGGGGATGCACATGCGGG 62.511 66.667 0.00 0.00 45.83 6.13
497 498 1.606885 AAAAGGGGATGCACATGCGG 61.607 55.000 0.00 0.00 45.83 5.69
498 499 0.247185 AAAAAGGGGATGCACATGCG 59.753 50.000 0.00 0.00 45.83 4.73
499 500 1.405933 GGAAAAAGGGGATGCACATGC 60.406 52.381 0.00 0.00 42.50 4.06
500 501 2.093869 CAGGAAAAAGGGGATGCACATG 60.094 50.000 0.00 0.00 0.00 3.21
501 502 2.181975 CAGGAAAAAGGGGATGCACAT 58.818 47.619 0.00 0.00 0.00 3.21
502 503 1.631405 CAGGAAAAAGGGGATGCACA 58.369 50.000 0.00 0.00 0.00 4.57
503 504 0.247460 GCAGGAAAAAGGGGATGCAC 59.753 55.000 0.00 0.00 33.92 4.57
504 505 0.904394 GGCAGGAAAAAGGGGATGCA 60.904 55.000 0.00 0.00 35.40 3.96
505 506 1.617018 GGGCAGGAAAAAGGGGATGC 61.617 60.000 0.00 0.00 0.00 3.91
506 507 0.252193 TGGGCAGGAAAAAGGGGATG 60.252 55.000 0.00 0.00 0.00 3.51
507 508 0.252239 GTGGGCAGGAAAAAGGGGAT 60.252 55.000 0.00 0.00 0.00 3.85
508 509 1.155155 GTGGGCAGGAAAAAGGGGA 59.845 57.895 0.00 0.00 0.00 4.81
509 510 2.275380 CGTGGGCAGGAAAAAGGGG 61.275 63.158 0.00 0.00 0.00 4.79
510 511 2.931068 GCGTGGGCAGGAAAAAGGG 61.931 63.158 0.00 0.00 39.62 3.95
511 512 2.199652 TGCGTGGGCAGGAAAAAGG 61.200 57.895 0.00 0.00 46.21 3.11
512 513 3.442441 TGCGTGGGCAGGAAAAAG 58.558 55.556 0.00 0.00 46.21 2.27
521 522 1.007387 CAAAAGGAGTTGCGTGGGC 60.007 57.895 0.00 0.00 40.52 5.36
522 523 0.030638 CACAAAAGGAGTTGCGTGGG 59.969 55.000 0.00 0.00 31.29 4.61
523 524 0.738389 ACACAAAAGGAGTTGCGTGG 59.262 50.000 0.00 0.00 30.92 4.94
524 525 2.159448 TCAACACAAAAGGAGTTGCGTG 60.159 45.455 0.00 0.00 44.60 5.34
525 526 2.088423 TCAACACAAAAGGAGTTGCGT 58.912 42.857 0.00 0.00 44.60 5.24
526 527 2.842208 TCAACACAAAAGGAGTTGCG 57.158 45.000 0.00 0.00 44.60 4.85
527 528 3.068024 TCCATCAACACAAAAGGAGTTGC 59.932 43.478 0.00 0.00 44.60 4.17
528 529 4.261741 CCTCCATCAACACAAAAGGAGTTG 60.262 45.833 0.00 0.00 45.80 3.16
529 530 3.891366 CCTCCATCAACACAAAAGGAGTT 59.109 43.478 0.00 0.00 40.74 3.01
530 531 3.138283 TCCTCCATCAACACAAAAGGAGT 59.862 43.478 0.00 0.00 40.74 3.85
531 532 3.503748 GTCCTCCATCAACACAAAAGGAG 59.496 47.826 0.00 0.00 41.72 3.69
532 533 3.117701 TGTCCTCCATCAACACAAAAGGA 60.118 43.478 0.00 0.00 0.00 3.36
533 534 3.221771 TGTCCTCCATCAACACAAAAGG 58.778 45.455 0.00 0.00 0.00 3.11
534 535 4.261741 CCTTGTCCTCCATCAACACAAAAG 60.262 45.833 0.00 0.00 0.00 2.27
535 536 3.636300 CCTTGTCCTCCATCAACACAAAA 59.364 43.478 0.00 0.00 0.00 2.44
536 537 3.221771 CCTTGTCCTCCATCAACACAAA 58.778 45.455 0.00 0.00 0.00 2.83
537 538 2.488891 CCCTTGTCCTCCATCAACACAA 60.489 50.000 0.00 0.00 0.00 3.33
538 539 1.073763 CCCTTGTCCTCCATCAACACA 59.926 52.381 0.00 0.00 0.00 3.72
539 540 1.614317 CCCCTTGTCCTCCATCAACAC 60.614 57.143 0.00 0.00 0.00 3.32
540 541 0.698238 CCCCTTGTCCTCCATCAACA 59.302 55.000 0.00 0.00 0.00 3.33
541 542 0.034089 CCCCCTTGTCCTCCATCAAC 60.034 60.000 0.00 0.00 0.00 3.18
542 543 0.477597 ACCCCCTTGTCCTCCATCAA 60.478 55.000 0.00 0.00 0.00 2.57
543 544 0.914417 GACCCCCTTGTCCTCCATCA 60.914 60.000 0.00 0.00 0.00 3.07
544 545 0.914417 TGACCCCCTTGTCCTCCATC 60.914 60.000 0.00 0.00 34.25 3.51
545 546 0.253820 ATGACCCCCTTGTCCTCCAT 60.254 55.000 0.00 0.00 34.25 3.41
546 547 1.163309 ATGACCCCCTTGTCCTCCA 59.837 57.895 0.00 0.00 34.25 3.86
547 548 1.609783 CATGACCCCCTTGTCCTCC 59.390 63.158 0.00 0.00 34.25 4.30
548 549 1.208165 ACCATGACCCCCTTGTCCTC 61.208 60.000 0.00 0.00 34.25 3.71
549 550 1.151587 ACCATGACCCCCTTGTCCT 60.152 57.895 0.00 0.00 34.25 3.85
550 551 1.303282 GACCATGACCCCCTTGTCC 59.697 63.158 0.00 0.00 34.25 4.02
551 552 0.035056 CTGACCATGACCCCCTTGTC 60.035 60.000 0.00 0.00 35.77 3.18
552 553 2.078452 CTGACCATGACCCCCTTGT 58.922 57.895 0.00 0.00 0.00 3.16
553 554 1.379044 GCTGACCATGACCCCCTTG 60.379 63.158 0.00 0.00 0.00 3.61
554 555 1.434513 TTGCTGACCATGACCCCCTT 61.435 55.000 0.00 0.00 0.00 3.95
555 556 1.852157 TTGCTGACCATGACCCCCT 60.852 57.895 0.00 0.00 0.00 4.79
556 557 1.379044 CTTGCTGACCATGACCCCC 60.379 63.158 0.00 0.00 0.00 5.40
557 558 1.379044 CCTTGCTGACCATGACCCC 60.379 63.158 0.00 0.00 0.00 4.95
558 559 2.048603 GCCTTGCTGACCATGACCC 61.049 63.158 0.00 0.00 0.00 4.46
559 560 2.401766 CGCCTTGCTGACCATGACC 61.402 63.158 0.00 0.00 0.00 4.02
560 561 1.237285 AACGCCTTGCTGACCATGAC 61.237 55.000 0.00 0.00 0.00 3.06
561 562 1.073025 AACGCCTTGCTGACCATGA 59.927 52.632 0.00 0.00 0.00 3.07
562 563 1.210931 CAACGCCTTGCTGACCATG 59.789 57.895 0.00 0.00 0.00 3.66
563 564 1.228245 ACAACGCCTTGCTGACCAT 60.228 52.632 0.00 0.00 0.00 3.55
564 565 1.891919 GACAACGCCTTGCTGACCA 60.892 57.895 0.00 0.00 0.00 4.02
565 566 2.946762 GACAACGCCTTGCTGACC 59.053 61.111 0.00 0.00 0.00 4.02
566 567 1.891060 CTCGACAACGCCTTGCTGAC 61.891 60.000 0.00 0.00 39.58 3.51
567 568 1.664649 CTCGACAACGCCTTGCTGA 60.665 57.895 0.00 0.00 39.58 4.26
568 569 1.621301 CTCTCGACAACGCCTTGCTG 61.621 60.000 0.00 0.00 39.58 4.41
569 570 1.373497 CTCTCGACAACGCCTTGCT 60.373 57.895 0.00 0.00 39.58 3.91
570 571 2.383527 CCTCTCGACAACGCCTTGC 61.384 63.158 0.00 0.00 39.58 4.01
571 572 1.738099 CCCTCTCGACAACGCCTTG 60.738 63.158 0.00 0.00 39.58 3.61
572 573 2.657237 CCCTCTCGACAACGCCTT 59.343 61.111 0.00 0.00 39.58 4.35
573 574 4.070552 GCCCTCTCGACAACGCCT 62.071 66.667 0.00 0.00 39.58 5.52
576 577 4.717629 TGCGCCCTCTCGACAACG 62.718 66.667 4.18 0.00 41.26 4.10
577 578 2.357034 TTGCGCCCTCTCGACAAC 60.357 61.111 4.18 0.00 0.00 3.32
578 579 2.048222 CTTGCGCCCTCTCGACAA 60.048 61.111 4.18 0.00 0.00 3.18
579 580 4.069232 CCTTGCGCCCTCTCGACA 62.069 66.667 4.18 0.00 0.00 4.35
580 581 4.070552 ACCTTGCGCCCTCTCGAC 62.071 66.667 4.18 0.00 0.00 4.20
581 582 4.069232 CACCTTGCGCCCTCTCGA 62.069 66.667 4.18 0.00 0.00 4.04
582 583 4.379243 ACACCTTGCGCCCTCTCG 62.379 66.667 4.18 0.00 0.00 4.04
583 584 2.743928 CACACCTTGCGCCCTCTC 60.744 66.667 4.18 0.00 0.00 3.20
584 585 4.335647 CCACACCTTGCGCCCTCT 62.336 66.667 4.18 0.00 0.00 3.69
585 586 4.643387 ACCACACCTTGCGCCCTC 62.643 66.667 4.18 0.00 0.00 4.30
586 587 4.204028 AACCACACCTTGCGCCCT 62.204 61.111 4.18 0.00 0.00 5.19
587 588 3.977244 CAACCACACCTTGCGCCC 61.977 66.667 4.18 0.00 0.00 6.13
588 589 2.904866 TCAACCACACCTTGCGCC 60.905 61.111 4.18 0.00 0.00 6.53
589 590 2.639286 CTCAACCACACCTTGCGC 59.361 61.111 0.00 0.00 0.00 6.09
590 591 1.227823 TCCTCAACCACACCTTGCG 60.228 57.895 0.00 0.00 0.00 4.85
591 592 0.179018 AGTCCTCAACCACACCTTGC 60.179 55.000 0.00 0.00 0.00 4.01
592 593 1.949525 CAAGTCCTCAACCACACCTTG 59.050 52.381 0.00 0.00 0.00 3.61
593 594 1.564348 ACAAGTCCTCAACCACACCTT 59.436 47.619 0.00 0.00 0.00 3.50
594 595 1.213296 ACAAGTCCTCAACCACACCT 58.787 50.000 0.00 0.00 0.00 4.00
595 596 1.676006 CAACAAGTCCTCAACCACACC 59.324 52.381 0.00 0.00 0.00 4.16
596 597 1.676006 CCAACAAGTCCTCAACCACAC 59.324 52.381 0.00 0.00 0.00 3.82
597 598 1.409521 CCCAACAAGTCCTCAACCACA 60.410 52.381 0.00 0.00 0.00 4.17
598 599 1.318576 CCCAACAAGTCCTCAACCAC 58.681 55.000 0.00 0.00 0.00 4.16
599 600 0.467290 GCCCAACAAGTCCTCAACCA 60.467 55.000 0.00 0.00 0.00 3.67
600 601 0.178990 AGCCCAACAAGTCCTCAACC 60.179 55.000 0.00 0.00 0.00 3.77
601 602 0.954452 CAGCCCAACAAGTCCTCAAC 59.046 55.000 0.00 0.00 0.00 3.18
602 603 0.550914 ACAGCCCAACAAGTCCTCAA 59.449 50.000 0.00 0.00 0.00 3.02
603 604 0.179020 CACAGCCCAACAAGTCCTCA 60.179 55.000 0.00 0.00 0.00 3.86
604 605 0.179018 ACACAGCCCAACAAGTCCTC 60.179 55.000 0.00 0.00 0.00 3.71
605 606 0.179018 GACACAGCCCAACAAGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
606 607 0.179018 AGACACAGCCCAACAAGTCC 60.179 55.000 0.00 0.00 0.00 3.85
607 608 1.680338 AAGACACAGCCCAACAAGTC 58.320 50.000 0.00 0.00 0.00 3.01
608 609 3.073062 AGATAAGACACAGCCCAACAAGT 59.927 43.478 0.00 0.00 0.00 3.16
609 610 3.438087 CAGATAAGACACAGCCCAACAAG 59.562 47.826 0.00 0.00 0.00 3.16
722 746 8.657712 GGTATTGTATTCTATTGGAGTTAGGGT 58.342 37.037 0.00 0.00 0.00 4.34
865 889 3.180507 AGCCTTCTCCTCTCAGACAATT 58.819 45.455 0.00 0.00 0.00 2.32
2499 2835 4.386711 ACTCCAACTAGTACAGCCAAAAC 58.613 43.478 0.00 0.00 0.00 2.43
2750 3086 9.061610 GTCACAAAATATTTCATTCCACTAACG 57.938 33.333 0.10 0.00 0.00 3.18
2963 3299 2.830321 TGATGTTTGGTGCATTATGCCA 59.170 40.909 15.06 3.33 44.23 4.92
3083 3421 3.181451 TGACAGCTTCACTCCACAAGAAT 60.181 43.478 0.00 0.00 0.00 2.40
3255 3593 0.107945 GCTCGTGGATCCAGCTTTCT 60.108 55.000 16.81 0.00 0.00 2.52
3324 3662 1.151668 CTTTCAGCAGGACTCCAACG 58.848 55.000 0.00 0.00 0.00 4.10
3354 3692 5.902681 TCGAAAGGTGACATCCATACTTAG 58.097 41.667 0.00 0.00 0.00 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.