Multiple sequence alignment - TraesCS3B01G230000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G230000 chr3B 100.000 2192 0 0 1 2192 342686972 342689163 0.000000e+00 4048
1 TraesCS3B01G230000 chr3B 93.018 931 58 6 491 1416 92296243 92295315 0.000000e+00 1352
2 TraesCS3B01G230000 chr3B 93.582 779 47 3 1416 2192 681320673 681319896 0.000000e+00 1158
3 TraesCS3B01G230000 chr3B 93.453 779 48 3 1417 2192 438787208 438787986 0.000000e+00 1153
4 TraesCS3B01G230000 chr1A 93.326 929 57 5 491 1416 278521685 278522611 0.000000e+00 1367
5 TraesCS3B01G230000 chr4A 93.219 929 59 4 491 1416 67519989 67520916 0.000000e+00 1363
6 TraesCS3B01G230000 chr2B 93.219 929 59 4 491 1416 234540669 234539742 0.000000e+00 1363
7 TraesCS3B01G230000 chr2B 93.393 787 43 6 1411 2192 188182390 188181608 0.000000e+00 1157
8 TraesCS3B01G230000 chr2B 93.445 778 46 5 1419 2192 136692267 136691491 0.000000e+00 1149
9 TraesCS3B01G230000 chr2B 89.613 491 44 6 1 488 27881244 27880758 3.090000e-173 617
10 TraesCS3B01G230000 chr4B 93.211 928 60 3 491 1416 495479221 495478295 0.000000e+00 1362
11 TraesCS3B01G230000 chr4B 93.982 781 42 4 1416 2192 240791286 240790507 0.000000e+00 1177
12 TraesCS3B01G230000 chr4B 89.431 492 46 4 1 488 60283797 60283308 1.110000e-172 616
13 TraesCS3B01G230000 chr6A 93.111 929 57 5 491 1416 597252502 597251578 0.000000e+00 1354
14 TraesCS3B01G230000 chr3A 93.003 929 61 4 491 1416 495104269 495103342 0.000000e+00 1352
15 TraesCS3B01G230000 chr3A 89.228 492 47 5 1 488 378583263 378583752 5.170000e-171 610
16 TraesCS3B01G230000 chr1B 92.896 929 62 4 491 1416 619194840 619193913 0.000000e+00 1347
17 TraesCS3B01G230000 chr1B 93.582 779 46 3 1417 2192 148558506 148557729 0.000000e+00 1158
18 TraesCS3B01G230000 chr1B 93.573 778 47 3 1417 2192 162608545 162609321 0.000000e+00 1157
19 TraesCS3B01G230000 chr7D 92.896 929 61 5 491 1416 307146132 307145206 0.000000e+00 1345
20 TraesCS3B01G230000 chr5B 93.718 780 45 4 1416 2192 294804121 294804899 0.000000e+00 1166
21 TraesCS3B01G230000 chr6B 93.325 779 48 4 1417 2192 509274568 509275345 0.000000e+00 1147
22 TraesCS3B01G230000 chr4D 90.417 480 40 4 16 491 338772762 338772285 5.140000e-176 627
23 TraesCS3B01G230000 chr4D 89.837 492 42 6 1 488 118275925 118276412 1.850000e-175 625
24 TraesCS3B01G230000 chr4D 89.431 492 46 4 1 488 105372776 105372287 1.110000e-172 616
25 TraesCS3B01G230000 chr7A 89.634 492 44 4 1 488 198937285 198937773 8.600000e-174 619
26 TraesCS3B01G230000 chr7A 89.315 496 43 8 1 491 466105496 466105986 4.000000e-172 614
27 TraesCS3B01G230000 chr2A 88.755 498 48 6 1 494 539405376 539404883 8.660000e-169 603


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G230000 chr3B 342686972 342689163 2191 False 4048 4048 100.000 1 2192 1 chr3B.!!$F1 2191
1 TraesCS3B01G230000 chr3B 92295315 92296243 928 True 1352 1352 93.018 491 1416 1 chr3B.!!$R1 925
2 TraesCS3B01G230000 chr3B 681319896 681320673 777 True 1158 1158 93.582 1416 2192 1 chr3B.!!$R2 776
3 TraesCS3B01G230000 chr3B 438787208 438787986 778 False 1153 1153 93.453 1417 2192 1 chr3B.!!$F2 775
4 TraesCS3B01G230000 chr1A 278521685 278522611 926 False 1367 1367 93.326 491 1416 1 chr1A.!!$F1 925
5 TraesCS3B01G230000 chr4A 67519989 67520916 927 False 1363 1363 93.219 491 1416 1 chr4A.!!$F1 925
6 TraesCS3B01G230000 chr2B 234539742 234540669 927 True 1363 1363 93.219 491 1416 1 chr2B.!!$R4 925
7 TraesCS3B01G230000 chr2B 188181608 188182390 782 True 1157 1157 93.393 1411 2192 1 chr2B.!!$R3 781
8 TraesCS3B01G230000 chr2B 136691491 136692267 776 True 1149 1149 93.445 1419 2192 1 chr2B.!!$R2 773
9 TraesCS3B01G230000 chr4B 495478295 495479221 926 True 1362 1362 93.211 491 1416 1 chr4B.!!$R3 925
10 TraesCS3B01G230000 chr4B 240790507 240791286 779 True 1177 1177 93.982 1416 2192 1 chr4B.!!$R2 776
11 TraesCS3B01G230000 chr6A 597251578 597252502 924 True 1354 1354 93.111 491 1416 1 chr6A.!!$R1 925
12 TraesCS3B01G230000 chr3A 495103342 495104269 927 True 1352 1352 93.003 491 1416 1 chr3A.!!$R1 925
13 TraesCS3B01G230000 chr1B 619193913 619194840 927 True 1347 1347 92.896 491 1416 1 chr1B.!!$R2 925
14 TraesCS3B01G230000 chr1B 148557729 148558506 777 True 1158 1158 93.582 1417 2192 1 chr1B.!!$R1 775
15 TraesCS3B01G230000 chr1B 162608545 162609321 776 False 1157 1157 93.573 1417 2192 1 chr1B.!!$F1 775
16 TraesCS3B01G230000 chr7D 307145206 307146132 926 True 1345 1345 92.896 491 1416 1 chr7D.!!$R1 925
17 TraesCS3B01G230000 chr5B 294804121 294804899 778 False 1166 1166 93.718 1416 2192 1 chr5B.!!$F1 776
18 TraesCS3B01G230000 chr6B 509274568 509275345 777 False 1147 1147 93.325 1417 2192 1 chr6B.!!$F1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 408 0.105964 TTCCCGTGTGTGTCCTCAAG 59.894 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1382 1387 0.740868 CTGCTCTTCGCGAATCCCAA 60.741 55.0 23.67 6.61 43.27 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.853555 TTTGATGATATGTATGTTGTTGTTTCC 57.146 29.630 0.00 0.00 0.00 3.13
42 43 7.995289 TGATGATATGTATGTTGTTGTTTCCC 58.005 34.615 0.00 0.00 0.00 3.97
43 44 7.833682 TGATGATATGTATGTTGTTGTTTCCCT 59.166 33.333 0.00 0.00 0.00 4.20
44 45 8.593945 ATGATATGTATGTTGTTGTTTCCCTT 57.406 30.769 0.00 0.00 0.00 3.95
45 46 9.693739 ATGATATGTATGTTGTTGTTTCCCTTA 57.306 29.630 0.00 0.00 0.00 2.69
46 47 9.173021 TGATATGTATGTTGTTGTTTCCCTTAG 57.827 33.333 0.00 0.00 0.00 2.18
47 48 9.174166 GATATGTATGTTGTTGTTTCCCTTAGT 57.826 33.333 0.00 0.00 0.00 2.24
48 49 6.627395 TGTATGTTGTTGTTTCCCTTAGTG 57.373 37.500 0.00 0.00 0.00 2.74
49 50 5.533154 TGTATGTTGTTGTTTCCCTTAGTGG 59.467 40.000 0.00 0.00 0.00 4.00
50 51 3.970842 TGTTGTTGTTTCCCTTAGTGGT 58.029 40.909 0.00 0.00 0.00 4.16
51 52 3.697045 TGTTGTTGTTTCCCTTAGTGGTG 59.303 43.478 0.00 0.00 0.00 4.17
52 53 3.655615 TGTTGTTTCCCTTAGTGGTGT 57.344 42.857 0.00 0.00 0.00 4.16
53 54 3.970842 TGTTGTTTCCCTTAGTGGTGTT 58.029 40.909 0.00 0.00 0.00 3.32
54 55 5.113446 TGTTGTTTCCCTTAGTGGTGTTA 57.887 39.130 0.00 0.00 0.00 2.41
55 56 5.697067 TGTTGTTTCCCTTAGTGGTGTTAT 58.303 37.500 0.00 0.00 0.00 1.89
56 57 5.533154 TGTTGTTTCCCTTAGTGGTGTTATG 59.467 40.000 0.00 0.00 0.00 1.90
57 58 5.313280 TGTTTCCCTTAGTGGTGTTATGT 57.687 39.130 0.00 0.00 0.00 2.29
58 59 5.067273 TGTTTCCCTTAGTGGTGTTATGTG 58.933 41.667 0.00 0.00 0.00 3.21
59 60 5.163184 TGTTTCCCTTAGTGGTGTTATGTGA 60.163 40.000 0.00 0.00 0.00 3.58
60 61 5.570205 TTCCCTTAGTGGTGTTATGTGAA 57.430 39.130 0.00 0.00 0.00 3.18
61 62 4.901868 TCCCTTAGTGGTGTTATGTGAAC 58.098 43.478 0.00 0.00 0.00 3.18
62 63 3.682858 CCCTTAGTGGTGTTATGTGAACG 59.317 47.826 0.00 0.00 0.00 3.95
63 64 4.312443 CCTTAGTGGTGTTATGTGAACGT 58.688 43.478 0.00 0.00 0.00 3.99
64 65 4.151689 CCTTAGTGGTGTTATGTGAACGTG 59.848 45.833 0.00 0.00 0.00 4.49
65 66 1.871039 AGTGGTGTTATGTGAACGTGC 59.129 47.619 0.00 0.00 0.00 5.34
66 67 1.600013 GTGGTGTTATGTGAACGTGCA 59.400 47.619 0.00 0.00 0.00 4.57
67 68 1.600013 TGGTGTTATGTGAACGTGCAC 59.400 47.619 20.38 20.38 39.22 4.57
68 69 1.871039 GGTGTTATGTGAACGTGCACT 59.129 47.619 26.63 14.75 39.49 4.40
69 70 3.061322 GGTGTTATGTGAACGTGCACTA 58.939 45.455 26.63 13.91 39.49 2.74
70 71 3.120786 GGTGTTATGTGAACGTGCACTAC 60.121 47.826 26.63 20.33 39.49 2.73
71 72 3.491639 GTGTTATGTGAACGTGCACTACA 59.508 43.478 26.63 22.35 39.49 2.74
72 73 4.151689 GTGTTATGTGAACGTGCACTACAT 59.848 41.667 26.63 19.46 39.49 2.29
73 74 4.151512 TGTTATGTGAACGTGCACTACATG 59.848 41.667 26.63 10.44 39.49 3.21
74 75 2.517650 TGTGAACGTGCACTACATGA 57.482 45.000 26.63 2.94 39.49 3.07
75 76 2.131972 TGTGAACGTGCACTACATGAC 58.868 47.619 26.63 0.00 39.49 3.06
76 77 2.131972 GTGAACGTGCACTACATGACA 58.868 47.619 19.92 2.79 38.75 3.58
77 78 2.096909 GTGAACGTGCACTACATGACAC 60.097 50.000 19.92 10.92 38.75 3.67
78 79 2.223947 TGAACGTGCACTACATGACACT 60.224 45.455 16.19 0.00 38.75 3.55
79 80 2.526304 ACGTGCACTACATGACACTT 57.474 45.000 16.19 0.00 38.75 3.16
80 81 2.404215 ACGTGCACTACATGACACTTC 58.596 47.619 16.19 0.00 38.75 3.01
81 82 2.223947 ACGTGCACTACATGACACTTCA 60.224 45.455 16.19 0.00 38.75 3.02
82 83 2.155732 CGTGCACTACATGACACTTCAC 59.844 50.000 16.19 0.00 37.49 3.18
83 84 2.480419 GTGCACTACATGACACTTCACC 59.520 50.000 10.32 0.00 33.38 4.02
84 85 2.103941 TGCACTACATGACACTTCACCA 59.896 45.455 0.00 0.00 33.38 4.17
85 86 3.244526 TGCACTACATGACACTTCACCAT 60.245 43.478 0.00 0.00 33.38 3.55
86 87 3.372206 GCACTACATGACACTTCACCATC 59.628 47.826 0.00 0.00 33.38 3.51
87 88 4.825422 CACTACATGACACTTCACCATCT 58.175 43.478 0.00 0.00 33.38 2.90
88 89 5.240891 CACTACATGACACTTCACCATCTT 58.759 41.667 0.00 0.00 33.38 2.40
89 90 5.702670 CACTACATGACACTTCACCATCTTT 59.297 40.000 0.00 0.00 33.38 2.52
90 91 5.702670 ACTACATGACACTTCACCATCTTTG 59.297 40.000 0.00 0.00 33.38 2.77
101 102 2.826674 CCATCTTTGGGCTAAGGGAA 57.173 50.000 0.00 0.00 39.56 3.97
102 103 3.100207 CCATCTTTGGGCTAAGGGAAA 57.900 47.619 0.00 0.00 39.56 3.13
103 104 3.026694 CCATCTTTGGGCTAAGGGAAAG 58.973 50.000 0.00 0.00 39.56 2.62
104 105 2.215942 TCTTTGGGCTAAGGGAAAGC 57.784 50.000 0.00 0.00 39.33 3.51
105 106 1.427368 TCTTTGGGCTAAGGGAAAGCA 59.573 47.619 0.00 0.00 41.93 3.91
106 107 2.042979 TCTTTGGGCTAAGGGAAAGCAT 59.957 45.455 0.00 0.00 41.93 3.79
107 108 2.621556 TTGGGCTAAGGGAAAGCATT 57.378 45.000 0.00 0.00 41.93 3.56
108 109 1.851304 TGGGCTAAGGGAAAGCATTG 58.149 50.000 0.00 0.00 41.93 2.82
109 110 0.461548 GGGCTAAGGGAAAGCATTGC 59.538 55.000 0.00 0.00 41.93 3.56
110 111 1.185315 GGCTAAGGGAAAGCATTGCA 58.815 50.000 11.91 0.00 41.93 4.08
111 112 1.135721 GGCTAAGGGAAAGCATTGCAG 59.864 52.381 11.91 0.00 41.93 4.41
112 113 2.094675 GCTAAGGGAAAGCATTGCAGA 58.905 47.619 11.91 0.00 39.83 4.26
113 114 2.098770 GCTAAGGGAAAGCATTGCAGAG 59.901 50.000 11.91 0.00 39.83 3.35
114 115 2.299326 AAGGGAAAGCATTGCAGAGT 57.701 45.000 11.91 0.00 0.00 3.24
115 116 3.439857 AAGGGAAAGCATTGCAGAGTA 57.560 42.857 11.91 0.00 0.00 2.59
116 117 3.659183 AGGGAAAGCATTGCAGAGTAT 57.341 42.857 11.91 0.00 0.00 2.12
117 118 3.973425 AGGGAAAGCATTGCAGAGTATT 58.027 40.909 11.91 0.00 0.00 1.89
118 119 4.347607 AGGGAAAGCATTGCAGAGTATTT 58.652 39.130 11.91 1.14 0.00 1.40
119 120 5.509498 AGGGAAAGCATTGCAGAGTATTTA 58.491 37.500 11.91 0.00 0.00 1.40
120 121 6.131961 AGGGAAAGCATTGCAGAGTATTTAT 58.868 36.000 11.91 0.00 0.00 1.40
121 122 6.608808 AGGGAAAGCATTGCAGAGTATTTATT 59.391 34.615 11.91 0.00 0.00 1.40
122 123 7.779798 AGGGAAAGCATTGCAGAGTATTTATTA 59.220 33.333 11.91 0.00 0.00 0.98
123 124 8.078596 GGGAAAGCATTGCAGAGTATTTATTAG 58.921 37.037 11.91 0.00 0.00 1.73
124 125 8.840321 GGAAAGCATTGCAGAGTATTTATTAGA 58.160 33.333 11.91 0.00 0.00 2.10
127 128 9.565090 AAGCATTGCAGAGTATTTATTAGATGA 57.435 29.630 11.91 0.00 0.00 2.92
128 129 9.736414 AGCATTGCAGAGTATTTATTAGATGAT 57.264 29.630 11.91 0.00 0.00 2.45
129 130 9.770503 GCATTGCAGAGTATTTATTAGATGATG 57.229 33.333 3.15 0.00 0.00 3.07
131 132 8.853077 TTGCAGAGTATTTATTAGATGATGGG 57.147 34.615 0.00 0.00 0.00 4.00
132 133 7.977818 TGCAGAGTATTTATTAGATGATGGGT 58.022 34.615 0.00 0.00 0.00 4.51
133 134 8.439971 TGCAGAGTATTTATTAGATGATGGGTT 58.560 33.333 0.00 0.00 0.00 4.11
134 135 8.725148 GCAGAGTATTTATTAGATGATGGGTTG 58.275 37.037 0.00 0.00 0.00 3.77
135 136 8.725148 CAGAGTATTTATTAGATGATGGGTTGC 58.275 37.037 0.00 0.00 0.00 4.17
136 137 8.664079 AGAGTATTTATTAGATGATGGGTTGCT 58.336 33.333 0.00 0.00 0.00 3.91
137 138 9.944376 GAGTATTTATTAGATGATGGGTTGCTA 57.056 33.333 0.00 0.00 0.00 3.49
138 139 9.950496 AGTATTTATTAGATGATGGGTTGCTAG 57.050 33.333 0.00 0.00 0.00 3.42
139 140 9.944376 GTATTTATTAGATGATGGGTTGCTAGA 57.056 33.333 0.00 0.00 0.00 2.43
141 142 7.618019 TTATTAGATGATGGGTTGCTAGAGT 57.382 36.000 0.00 0.00 0.00 3.24
142 143 3.834489 AGATGATGGGTTGCTAGAGTG 57.166 47.619 0.00 0.00 0.00 3.51
143 144 3.378512 AGATGATGGGTTGCTAGAGTGA 58.621 45.455 0.00 0.00 0.00 3.41
144 145 3.133721 AGATGATGGGTTGCTAGAGTGAC 59.866 47.826 0.00 0.00 0.00 3.67
145 146 2.256306 TGATGGGTTGCTAGAGTGACA 58.744 47.619 0.00 0.00 0.00 3.58
146 147 2.234661 TGATGGGTTGCTAGAGTGACAG 59.765 50.000 0.00 0.00 0.00 3.51
147 148 2.009681 TGGGTTGCTAGAGTGACAGA 57.990 50.000 0.00 0.00 0.00 3.41
148 149 2.325484 TGGGTTGCTAGAGTGACAGAA 58.675 47.619 0.00 0.00 0.00 3.02
149 150 2.300152 TGGGTTGCTAGAGTGACAGAAG 59.700 50.000 0.00 0.00 0.00 2.85
150 151 2.342179 GGTTGCTAGAGTGACAGAAGC 58.658 52.381 0.00 0.00 0.00 3.86
151 152 2.028567 GGTTGCTAGAGTGACAGAAGCT 60.029 50.000 0.00 0.00 34.28 3.74
152 153 3.556004 GGTTGCTAGAGTGACAGAAGCTT 60.556 47.826 0.00 0.00 34.28 3.74
153 154 4.322049 GGTTGCTAGAGTGACAGAAGCTTA 60.322 45.833 0.00 0.00 34.28 3.09
154 155 5.230942 GTTGCTAGAGTGACAGAAGCTTAA 58.769 41.667 0.00 0.00 34.28 1.85
155 156 5.468540 TGCTAGAGTGACAGAAGCTTAAA 57.531 39.130 0.00 0.00 34.28 1.52
156 157 5.230942 TGCTAGAGTGACAGAAGCTTAAAC 58.769 41.667 0.00 0.00 34.28 2.01
157 158 4.627900 GCTAGAGTGACAGAAGCTTAAACC 59.372 45.833 0.00 0.00 0.00 3.27
158 159 4.009370 AGAGTGACAGAAGCTTAAACCC 57.991 45.455 0.00 0.00 0.00 4.11
159 160 3.648545 AGAGTGACAGAAGCTTAAACCCT 59.351 43.478 0.00 0.00 0.00 4.34
160 161 4.838986 AGAGTGACAGAAGCTTAAACCCTA 59.161 41.667 0.00 0.00 0.00 3.53
161 162 5.046950 AGAGTGACAGAAGCTTAAACCCTAG 60.047 44.000 0.00 0.00 0.00 3.02
162 163 4.593634 AGTGACAGAAGCTTAAACCCTAGT 59.406 41.667 0.00 0.00 0.00 2.57
163 164 5.071923 AGTGACAGAAGCTTAAACCCTAGTT 59.928 40.000 0.00 0.00 38.03 2.24
165 166 6.932960 GTGACAGAAGCTTAAACCCTAGTTTA 59.067 38.462 0.00 0.00 44.44 2.01
166 167 7.606839 GTGACAGAAGCTTAAACCCTAGTTTAT 59.393 37.037 0.00 0.00 45.50 1.40
167 168 7.606456 TGACAGAAGCTTAAACCCTAGTTTATG 59.394 37.037 0.00 3.88 45.50 1.90
174 175 7.492352 CTTAAACCCTAGTTTATGCGCTATT 57.508 36.000 9.73 0.00 45.50 1.73
175 176 8.597662 CTTAAACCCTAGTTTATGCGCTATTA 57.402 34.615 9.73 0.00 45.50 0.98
176 177 6.856135 AAACCCTAGTTTATGCGCTATTAC 57.144 37.500 9.73 1.82 44.44 1.89
177 178 5.540400 ACCCTAGTTTATGCGCTATTACA 57.460 39.130 9.73 0.00 0.00 2.41
178 179 6.110411 ACCCTAGTTTATGCGCTATTACAT 57.890 37.500 9.73 0.00 0.00 2.29
179 180 7.235935 ACCCTAGTTTATGCGCTATTACATA 57.764 36.000 9.73 0.00 0.00 2.29
180 181 7.673180 ACCCTAGTTTATGCGCTATTACATAA 58.327 34.615 9.73 0.00 37.06 1.90
181 182 7.817962 ACCCTAGTTTATGCGCTATTACATAAG 59.182 37.037 9.73 1.99 39.29 1.73
182 183 7.277981 CCCTAGTTTATGCGCTATTACATAAGG 59.722 40.741 9.73 9.81 39.29 2.69
183 184 7.277981 CCTAGTTTATGCGCTATTACATAAGGG 59.722 40.741 9.73 1.47 39.29 3.95
184 185 6.531021 AGTTTATGCGCTATTACATAAGGGT 58.469 36.000 9.73 0.00 39.29 4.34
185 186 6.996282 AGTTTATGCGCTATTACATAAGGGTT 59.004 34.615 9.73 0.00 39.29 4.11
186 187 7.501225 AGTTTATGCGCTATTACATAAGGGTTT 59.499 33.333 9.73 0.00 39.29 3.27
187 188 5.689383 ATGCGCTATTACATAAGGGTTTG 57.311 39.130 9.73 0.00 0.00 2.93
188 189 4.771903 TGCGCTATTACATAAGGGTTTGA 58.228 39.130 9.73 0.00 0.00 2.69
189 190 4.573201 TGCGCTATTACATAAGGGTTTGAC 59.427 41.667 9.73 0.00 0.00 3.18
190 191 4.814771 GCGCTATTACATAAGGGTTTGACT 59.185 41.667 0.00 0.00 0.00 3.41
191 192 5.296035 GCGCTATTACATAAGGGTTTGACTT 59.704 40.000 0.00 0.00 0.00 3.01
192 193 6.715464 CGCTATTACATAAGGGTTTGACTTG 58.285 40.000 0.00 0.00 0.00 3.16
193 194 6.238374 CGCTATTACATAAGGGTTTGACTTGG 60.238 42.308 0.00 0.00 0.00 3.61
194 195 6.826741 GCTATTACATAAGGGTTTGACTTGGA 59.173 38.462 0.00 0.00 0.00 3.53
195 196 7.502561 GCTATTACATAAGGGTTTGACTTGGAT 59.497 37.037 0.00 0.00 0.00 3.41
205 206 9.936329 AAGGGTTTGACTTGGATATATATGTTT 57.064 29.630 0.00 0.00 0.00 2.83
206 207 9.574516 AGGGTTTGACTTGGATATATATGTTTC 57.425 33.333 0.00 0.00 0.00 2.78
207 208 9.349713 GGGTTTGACTTGGATATATATGTTTCA 57.650 33.333 0.00 0.00 0.00 2.69
249 250 9.647797 TCTTAATTCTTATTTCGTACTTGCAGA 57.352 29.630 0.00 0.00 0.00 4.26
252 253 5.718649 TCTTATTTCGTACTTGCAGATGC 57.281 39.130 0.00 0.00 42.50 3.91
253 254 5.419542 TCTTATTTCGTACTTGCAGATGCT 58.580 37.500 6.35 0.00 42.66 3.79
254 255 5.874810 TCTTATTTCGTACTTGCAGATGCTT 59.125 36.000 6.35 0.00 42.66 3.91
255 256 3.811722 TTTCGTACTTGCAGATGCTTG 57.188 42.857 6.35 1.62 42.66 4.01
256 257 1.078709 TCGTACTTGCAGATGCTTGC 58.921 50.000 6.35 2.14 44.33 4.01
263 264 1.807886 GCAGATGCTTGCAAGAGGG 59.192 57.895 30.39 13.98 43.53 4.30
264 265 1.664321 GCAGATGCTTGCAAGAGGGG 61.664 60.000 30.39 14.66 43.53 4.79
265 266 1.035932 CAGATGCTTGCAAGAGGGGG 61.036 60.000 30.39 11.59 0.00 5.40
266 267 1.000396 GATGCTTGCAAGAGGGGGT 60.000 57.895 30.39 7.90 0.00 4.95
267 268 0.255890 GATGCTTGCAAGAGGGGGTA 59.744 55.000 30.39 2.19 0.00 3.69
268 269 0.704076 ATGCTTGCAAGAGGGGGTAA 59.296 50.000 30.39 4.53 0.00 2.85
269 270 0.704076 TGCTTGCAAGAGGGGGTAAT 59.296 50.000 30.39 0.00 0.00 1.89
270 271 1.340991 TGCTTGCAAGAGGGGGTAATC 60.341 52.381 30.39 8.44 0.00 1.75
271 272 1.340991 GCTTGCAAGAGGGGGTAATCA 60.341 52.381 30.39 0.00 0.00 2.57
272 273 2.687914 GCTTGCAAGAGGGGGTAATCAT 60.688 50.000 30.39 0.00 0.00 2.45
273 274 3.435026 GCTTGCAAGAGGGGGTAATCATA 60.435 47.826 30.39 0.00 0.00 2.15
274 275 4.792068 CTTGCAAGAGGGGGTAATCATAA 58.208 43.478 22.31 0.00 0.00 1.90
275 276 4.437682 TGCAAGAGGGGGTAATCATAAG 57.562 45.455 0.00 0.00 0.00 1.73
276 277 3.785887 TGCAAGAGGGGGTAATCATAAGT 59.214 43.478 0.00 0.00 0.00 2.24
277 278 4.137543 GCAAGAGGGGGTAATCATAAGTG 58.862 47.826 0.00 0.00 0.00 3.16
278 279 4.385310 GCAAGAGGGGGTAATCATAAGTGT 60.385 45.833 0.00 0.00 0.00 3.55
279 280 5.126067 CAAGAGGGGGTAATCATAAGTGTG 58.874 45.833 0.00 0.00 0.00 3.82
280 281 4.631234 AGAGGGGGTAATCATAAGTGTGA 58.369 43.478 0.00 0.00 0.00 3.58
281 282 4.656112 AGAGGGGGTAATCATAAGTGTGAG 59.344 45.833 0.00 0.00 0.00 3.51
282 283 3.716872 AGGGGGTAATCATAAGTGTGAGG 59.283 47.826 0.00 0.00 0.00 3.86
283 284 3.477530 GGGGTAATCATAAGTGTGAGGC 58.522 50.000 0.00 0.00 0.00 4.70
284 285 3.136626 GGGGTAATCATAAGTGTGAGGCT 59.863 47.826 0.00 0.00 0.00 4.58
285 286 4.385310 GGGGTAATCATAAGTGTGAGGCTT 60.385 45.833 0.00 0.00 0.00 4.35
286 287 4.576463 GGGTAATCATAAGTGTGAGGCTTG 59.424 45.833 0.00 0.00 0.00 4.01
287 288 5.186198 GGTAATCATAAGTGTGAGGCTTGT 58.814 41.667 0.00 0.00 0.00 3.16
288 289 5.648092 GGTAATCATAAGTGTGAGGCTTGTT 59.352 40.000 0.00 0.00 0.00 2.83
289 290 5.886960 AATCATAAGTGTGAGGCTTGTTC 57.113 39.130 0.00 0.00 0.00 3.18
290 291 4.350368 TCATAAGTGTGAGGCTTGTTCA 57.650 40.909 0.00 0.00 0.00 3.18
291 292 4.713553 TCATAAGTGTGAGGCTTGTTCAA 58.286 39.130 0.00 0.00 0.00 2.69
292 293 4.756642 TCATAAGTGTGAGGCTTGTTCAAG 59.243 41.667 8.04 8.04 0.00 3.02
293 294 2.717639 AGTGTGAGGCTTGTTCAAGT 57.282 45.000 13.04 0.00 0.00 3.16
294 295 3.838244 AGTGTGAGGCTTGTTCAAGTA 57.162 42.857 13.04 0.00 0.00 2.24
295 296 4.150897 AGTGTGAGGCTTGTTCAAGTAA 57.849 40.909 13.04 0.00 0.00 2.24
296 297 4.130118 AGTGTGAGGCTTGTTCAAGTAAG 58.870 43.478 13.04 0.00 0.00 2.34
297 298 4.127171 GTGTGAGGCTTGTTCAAGTAAGA 58.873 43.478 13.04 0.00 0.00 2.10
298 299 4.574828 GTGTGAGGCTTGTTCAAGTAAGAA 59.425 41.667 13.04 0.00 0.00 2.52
299 300 4.574828 TGTGAGGCTTGTTCAAGTAAGAAC 59.425 41.667 13.04 0.00 46.22 3.01
308 309 5.570234 GTTCAAGTAAGAACAACACCCAA 57.430 39.130 0.00 0.00 45.53 4.12
309 310 5.578776 GTTCAAGTAAGAACAACACCCAAG 58.421 41.667 0.00 0.00 45.53 3.61
310 311 5.105567 TCAAGTAAGAACAACACCCAAGA 57.894 39.130 0.00 0.00 0.00 3.02
311 312 5.502079 TCAAGTAAGAACAACACCCAAGAA 58.498 37.500 0.00 0.00 0.00 2.52
312 313 5.355910 TCAAGTAAGAACAACACCCAAGAAC 59.644 40.000 0.00 0.00 0.00 3.01
313 314 5.112129 AGTAAGAACAACACCCAAGAACT 57.888 39.130 0.00 0.00 0.00 3.01
314 315 6.243216 AGTAAGAACAACACCCAAGAACTA 57.757 37.500 0.00 0.00 0.00 2.24
315 316 6.289064 AGTAAGAACAACACCCAAGAACTAG 58.711 40.000 0.00 0.00 0.00 2.57
316 317 4.772886 AGAACAACACCCAAGAACTAGT 57.227 40.909 0.00 0.00 0.00 2.57
317 318 4.704965 AGAACAACACCCAAGAACTAGTC 58.295 43.478 0.00 0.00 0.00 2.59
318 319 3.487120 ACAACACCCAAGAACTAGTCC 57.513 47.619 0.00 0.00 0.00 3.85
319 320 2.775384 ACAACACCCAAGAACTAGTCCA 59.225 45.455 0.00 0.00 0.00 4.02
320 321 3.139077 CAACACCCAAGAACTAGTCCAC 58.861 50.000 0.00 0.00 0.00 4.02
321 322 1.697982 ACACCCAAGAACTAGTCCACC 59.302 52.381 0.00 0.00 0.00 4.61
322 323 1.003233 CACCCAAGAACTAGTCCACCC 59.997 57.143 0.00 0.00 0.00 4.61
323 324 1.358152 CCCAAGAACTAGTCCACCCA 58.642 55.000 0.00 0.00 0.00 4.51
324 325 1.003233 CCCAAGAACTAGTCCACCCAC 59.997 57.143 0.00 0.00 0.00 4.61
325 326 1.697432 CCAAGAACTAGTCCACCCACA 59.303 52.381 0.00 0.00 0.00 4.17
326 327 2.305927 CCAAGAACTAGTCCACCCACAT 59.694 50.000 0.00 0.00 0.00 3.21
327 328 3.517901 CCAAGAACTAGTCCACCCACATA 59.482 47.826 0.00 0.00 0.00 2.29
328 329 4.164221 CCAAGAACTAGTCCACCCACATAT 59.836 45.833 0.00 0.00 0.00 1.78
329 330 5.360591 CAAGAACTAGTCCACCCACATATC 58.639 45.833 0.00 0.00 0.00 1.63
330 331 4.620723 AGAACTAGTCCACCCACATATCA 58.379 43.478 0.00 0.00 0.00 2.15
331 332 5.030147 AGAACTAGTCCACCCACATATCAA 58.970 41.667 0.00 0.00 0.00 2.57
332 333 5.487488 AGAACTAGTCCACCCACATATCAAA 59.513 40.000 0.00 0.00 0.00 2.69
333 334 5.975988 ACTAGTCCACCCACATATCAAAT 57.024 39.130 0.00 0.00 0.00 2.32
334 335 6.327386 ACTAGTCCACCCACATATCAAATT 57.673 37.500 0.00 0.00 0.00 1.82
335 336 7.446106 ACTAGTCCACCCACATATCAAATTA 57.554 36.000 0.00 0.00 0.00 1.40
336 337 8.045720 ACTAGTCCACCCACATATCAAATTAT 57.954 34.615 0.00 0.00 0.00 1.28
337 338 8.157476 ACTAGTCCACCCACATATCAAATTATC 58.843 37.037 0.00 0.00 0.00 1.75
338 339 6.910191 AGTCCACCCACATATCAAATTATCA 58.090 36.000 0.00 0.00 0.00 2.15
339 340 7.353525 AGTCCACCCACATATCAAATTATCAA 58.646 34.615 0.00 0.00 0.00 2.57
340 341 7.838696 AGTCCACCCACATATCAAATTATCAAA 59.161 33.333 0.00 0.00 0.00 2.69
341 342 8.137437 GTCCACCCACATATCAAATTATCAAAG 58.863 37.037 0.00 0.00 0.00 2.77
342 343 7.838696 TCCACCCACATATCAAATTATCAAAGT 59.161 33.333 0.00 0.00 0.00 2.66
343 344 9.130661 CCACCCACATATCAAATTATCAAAGTA 57.869 33.333 0.00 0.00 0.00 2.24
346 347 9.663904 CCCACATATCAAATTATCAAAGTAACG 57.336 33.333 0.00 0.00 0.00 3.18
351 352 7.948513 ATCAAATTATCAAAGTAACGAACGC 57.051 32.000 0.00 0.00 0.00 4.84
352 353 6.010675 TCAAATTATCAAAGTAACGAACGCG 58.989 36.000 3.53 3.53 44.79 6.01
353 354 5.766702 AATTATCAAAGTAACGAACGCGA 57.233 34.783 15.93 0.00 41.64 5.87
354 355 5.766702 ATTATCAAAGTAACGAACGCGAA 57.233 34.783 15.93 0.00 41.64 4.70
355 356 5.766702 TTATCAAAGTAACGAACGCGAAT 57.233 34.783 15.93 0.00 41.64 3.34
356 357 3.693300 TCAAAGTAACGAACGCGAATC 57.307 42.857 15.93 10.08 41.64 2.52
357 358 3.051327 TCAAAGTAACGAACGCGAATCA 58.949 40.909 15.93 0.00 41.64 2.57
358 359 3.490155 TCAAAGTAACGAACGCGAATCAA 59.510 39.130 15.93 0.00 41.64 2.57
359 360 4.025896 TCAAAGTAACGAACGCGAATCAAA 60.026 37.500 15.93 0.00 41.64 2.69
360 361 3.429061 AGTAACGAACGCGAATCAAAC 57.571 42.857 15.93 8.73 41.64 2.93
361 362 2.796031 AGTAACGAACGCGAATCAAACA 59.204 40.909 15.93 0.00 41.64 2.83
362 363 2.741122 AACGAACGCGAATCAAACAA 57.259 40.000 15.93 0.00 41.64 2.83
363 364 2.741122 ACGAACGCGAATCAAACAAA 57.259 40.000 15.93 0.00 41.64 2.83
364 365 3.262135 ACGAACGCGAATCAAACAAAT 57.738 38.095 15.93 0.00 41.64 2.32
365 366 4.392619 ACGAACGCGAATCAAACAAATA 57.607 36.364 15.93 0.00 41.64 1.40
366 367 4.965062 ACGAACGCGAATCAAACAAATAT 58.035 34.783 15.93 0.00 41.64 1.28
367 368 4.786068 ACGAACGCGAATCAAACAAATATG 59.214 37.500 15.93 0.00 41.64 1.78
368 369 5.018869 CGAACGCGAATCAAACAAATATGA 58.981 37.500 15.93 0.00 40.82 2.15
369 370 5.676744 CGAACGCGAATCAAACAAATATGAT 59.323 36.000 15.93 0.00 40.82 2.45
370 371 6.343385 CGAACGCGAATCAAACAAATATGATG 60.343 38.462 15.93 0.00 40.82 3.07
371 372 6.117911 ACGCGAATCAAACAAATATGATGA 57.882 33.333 15.93 0.00 36.44 2.92
372 373 6.550843 ACGCGAATCAAACAAATATGATGAA 58.449 32.000 15.93 0.00 36.44 2.57
373 374 7.195646 ACGCGAATCAAACAAATATGATGAAT 58.804 30.769 15.93 0.00 36.44 2.57
374 375 7.166307 ACGCGAATCAAACAAATATGATGAATG 59.834 33.333 15.93 0.00 36.44 2.67
375 376 7.166307 CGCGAATCAAACAAATATGATGAATGT 59.834 33.333 0.00 0.00 36.44 2.71
376 377 8.263950 GCGAATCAAACAAATATGATGAATGTG 58.736 33.333 0.00 0.00 36.44 3.21
377 378 9.505995 CGAATCAAACAAATATGATGAATGTGA 57.494 29.630 0.00 0.00 36.44 3.58
384 385 9.671279 AACAAATATGATGAATGTGACTAGACA 57.329 29.630 0.00 0.00 0.00 3.41
385 386 9.671279 ACAAATATGATGAATGTGACTAGACAA 57.329 29.630 0.00 0.00 0.00 3.18
391 392 8.044060 TGATGAATGTGACTAGACAAAATTCC 57.956 34.615 19.59 11.53 30.65 3.01
392 393 6.817765 TGAATGTGACTAGACAAAATTCCC 57.182 37.500 19.59 6.55 30.65 3.97
393 394 5.411361 TGAATGTGACTAGACAAAATTCCCG 59.589 40.000 19.59 0.00 30.65 5.14
394 395 4.345859 TGTGACTAGACAAAATTCCCGT 57.654 40.909 0.00 0.00 0.00 5.28
395 396 4.062293 TGTGACTAGACAAAATTCCCGTG 58.938 43.478 0.00 0.00 0.00 4.94
396 397 4.062991 GTGACTAGACAAAATTCCCGTGT 58.937 43.478 0.00 0.00 0.00 4.49
397 398 4.062293 TGACTAGACAAAATTCCCGTGTG 58.938 43.478 0.00 0.00 0.00 3.82
398 399 4.062991 GACTAGACAAAATTCCCGTGTGT 58.937 43.478 0.00 0.00 0.00 3.72
399 400 3.813166 ACTAGACAAAATTCCCGTGTGTG 59.187 43.478 0.00 0.00 0.00 3.82
400 401 2.650322 AGACAAAATTCCCGTGTGTGT 58.350 42.857 0.00 0.00 0.00 3.72
401 402 2.616842 AGACAAAATTCCCGTGTGTGTC 59.383 45.455 0.00 0.00 35.30 3.67
402 403 1.679153 ACAAAATTCCCGTGTGTGTCC 59.321 47.619 0.00 0.00 0.00 4.02
403 404 1.953686 CAAAATTCCCGTGTGTGTCCT 59.046 47.619 0.00 0.00 0.00 3.85
404 405 1.892209 AAATTCCCGTGTGTGTCCTC 58.108 50.000 0.00 0.00 0.00 3.71
405 406 0.762418 AATTCCCGTGTGTGTCCTCA 59.238 50.000 0.00 0.00 0.00 3.86
406 407 0.762418 ATTCCCGTGTGTGTCCTCAA 59.238 50.000 0.00 0.00 0.00 3.02
407 408 0.105964 TTCCCGTGTGTGTCCTCAAG 59.894 55.000 0.00 0.00 0.00 3.02
408 409 0.757561 TCCCGTGTGTGTCCTCAAGA 60.758 55.000 0.00 0.00 0.00 3.02
409 410 0.105964 CCCGTGTGTGTCCTCAAGAA 59.894 55.000 0.00 0.00 0.00 2.52
410 411 1.270839 CCCGTGTGTGTCCTCAAGAAT 60.271 52.381 0.00 0.00 0.00 2.40
411 412 1.800586 CCGTGTGTGTCCTCAAGAATG 59.199 52.381 0.00 0.00 0.00 2.67
412 413 1.195448 CGTGTGTGTCCTCAAGAATGC 59.805 52.381 0.00 0.00 0.00 3.56
413 414 1.195448 GTGTGTGTCCTCAAGAATGCG 59.805 52.381 0.00 0.00 0.00 4.73
414 415 1.202639 TGTGTGTCCTCAAGAATGCGT 60.203 47.619 0.00 0.00 0.00 5.24
415 416 1.873591 GTGTGTCCTCAAGAATGCGTT 59.126 47.619 0.00 0.00 0.00 4.84
416 417 1.872952 TGTGTCCTCAAGAATGCGTTG 59.127 47.619 0.00 0.00 0.00 4.10
417 418 0.874390 TGTCCTCAAGAATGCGTTGC 59.126 50.000 0.00 0.00 0.00 4.17
418 419 1.160137 GTCCTCAAGAATGCGTTGCT 58.840 50.000 0.00 0.00 0.00 3.91
419 420 1.537202 GTCCTCAAGAATGCGTTGCTT 59.463 47.619 0.00 0.00 0.00 3.91
420 421 2.742053 GTCCTCAAGAATGCGTTGCTTA 59.258 45.455 0.00 0.00 0.00 3.09
421 422 2.742053 TCCTCAAGAATGCGTTGCTTAC 59.258 45.455 0.00 0.00 0.00 2.34
422 423 2.744202 CCTCAAGAATGCGTTGCTTACT 59.256 45.455 0.00 0.00 0.00 2.24
423 424 3.932710 CCTCAAGAATGCGTTGCTTACTA 59.067 43.478 0.00 0.00 0.00 1.82
424 425 4.572389 CCTCAAGAATGCGTTGCTTACTAT 59.428 41.667 0.00 0.00 0.00 2.12
425 426 5.753438 CCTCAAGAATGCGTTGCTTACTATA 59.247 40.000 0.00 0.00 0.00 1.31
426 427 6.257849 CCTCAAGAATGCGTTGCTTACTATAA 59.742 38.462 0.00 0.00 0.00 0.98
427 428 7.234187 TCAAGAATGCGTTGCTTACTATAAG 57.766 36.000 0.00 0.00 0.00 1.73
428 429 7.039270 TCAAGAATGCGTTGCTTACTATAAGA 58.961 34.615 0.00 0.00 0.00 2.10
429 430 7.222805 TCAAGAATGCGTTGCTTACTATAAGAG 59.777 37.037 0.00 0.00 0.00 2.85
430 431 6.806751 AGAATGCGTTGCTTACTATAAGAGA 58.193 36.000 0.00 0.00 0.00 3.10
431 432 7.437748 AGAATGCGTTGCTTACTATAAGAGAT 58.562 34.615 0.00 0.00 0.00 2.75
432 433 7.596995 AGAATGCGTTGCTTACTATAAGAGATC 59.403 37.037 0.00 0.00 0.00 2.75
433 434 5.212934 TGCGTTGCTTACTATAAGAGATCG 58.787 41.667 0.00 0.86 0.00 3.69
434 435 5.213675 GCGTTGCTTACTATAAGAGATCGT 58.786 41.667 0.00 0.00 0.00 3.73
435 436 5.686397 GCGTTGCTTACTATAAGAGATCGTT 59.314 40.000 0.00 0.00 0.00 3.85
436 437 6.198591 GCGTTGCTTACTATAAGAGATCGTTT 59.801 38.462 0.00 0.00 0.00 3.60
437 438 7.565431 GCGTTGCTTACTATAAGAGATCGTTTC 60.565 40.741 0.00 0.00 0.00 2.78
438 439 7.356557 CGTTGCTTACTATAAGAGATCGTTTCG 60.357 40.741 0.00 0.00 0.00 3.46
439 440 6.436261 TGCTTACTATAAGAGATCGTTTCGG 58.564 40.000 0.00 0.00 0.00 4.30
440 441 5.342791 GCTTACTATAAGAGATCGTTTCGGC 59.657 44.000 0.00 0.00 0.00 5.54
441 442 4.240175 ACTATAAGAGATCGTTTCGGCC 57.760 45.455 0.00 0.00 0.00 6.13
442 443 3.890147 ACTATAAGAGATCGTTTCGGCCT 59.110 43.478 0.00 0.00 0.00 5.19
443 444 5.068636 ACTATAAGAGATCGTTTCGGCCTA 58.931 41.667 0.00 0.00 0.00 3.93
444 445 5.711036 ACTATAAGAGATCGTTTCGGCCTAT 59.289 40.000 0.00 0.00 0.00 2.57
445 446 3.372660 AAGAGATCGTTTCGGCCTATC 57.627 47.619 0.00 0.00 0.00 2.08
446 447 2.588620 AGAGATCGTTTCGGCCTATCT 58.411 47.619 0.00 0.00 0.00 1.98
447 448 2.959707 AGAGATCGTTTCGGCCTATCTT 59.040 45.455 0.00 0.00 0.00 2.40
448 449 3.385111 AGAGATCGTTTCGGCCTATCTTT 59.615 43.478 0.00 0.00 0.00 2.52
449 450 3.458189 AGATCGTTTCGGCCTATCTTTG 58.542 45.455 0.00 0.00 0.00 2.77
450 451 1.365699 TCGTTTCGGCCTATCTTTGC 58.634 50.000 0.00 0.00 0.00 3.68
451 452 1.066430 TCGTTTCGGCCTATCTTTGCT 60.066 47.619 0.00 0.00 0.00 3.91
452 453 2.166870 TCGTTTCGGCCTATCTTTGCTA 59.833 45.455 0.00 0.00 0.00 3.49
453 454 2.933906 CGTTTCGGCCTATCTTTGCTAA 59.066 45.455 0.00 0.00 0.00 3.09
454 455 3.372822 CGTTTCGGCCTATCTTTGCTAAA 59.627 43.478 0.00 0.00 0.00 1.85
455 456 4.142773 CGTTTCGGCCTATCTTTGCTAAAA 60.143 41.667 0.00 0.00 0.00 1.52
456 457 5.618195 CGTTTCGGCCTATCTTTGCTAAAAA 60.618 40.000 0.00 0.00 0.00 1.94
475 476 1.852633 AAAGGATTGGGCTACCTTGC 58.147 50.000 0.00 0.00 42.25 4.01
476 477 1.002857 AAGGATTGGGCTACCTTGCT 58.997 50.000 0.00 0.00 41.64 3.91
477 478 0.257039 AGGATTGGGCTACCTTGCTG 59.743 55.000 0.00 0.00 37.76 4.41
478 479 1.387295 GGATTGGGCTACCTTGCTGC 61.387 60.000 0.00 0.00 37.76 5.25
479 480 0.680921 GATTGGGCTACCTTGCTGCA 60.681 55.000 0.00 0.00 37.76 4.41
480 481 0.967380 ATTGGGCTACCTTGCTGCAC 60.967 55.000 0.00 0.00 37.76 4.57
481 482 2.751837 GGGCTACCTTGCTGCACC 60.752 66.667 0.00 0.00 0.00 5.01
482 483 2.352805 GGCTACCTTGCTGCACCT 59.647 61.111 0.00 0.00 0.00 4.00
483 484 1.303643 GGCTACCTTGCTGCACCTT 60.304 57.895 0.00 0.00 0.00 3.50
484 485 0.895559 GGCTACCTTGCTGCACCTTT 60.896 55.000 0.00 0.00 0.00 3.11
485 486 0.242017 GCTACCTTGCTGCACCTTTG 59.758 55.000 0.00 0.00 0.00 2.77
486 487 1.609208 CTACCTTGCTGCACCTTTGT 58.391 50.000 0.00 0.00 0.00 2.83
487 488 1.956477 CTACCTTGCTGCACCTTTGTT 59.044 47.619 0.00 0.00 0.00 2.83
488 489 1.194218 ACCTTGCTGCACCTTTGTTT 58.806 45.000 0.00 0.00 0.00 2.83
489 490 2.383855 ACCTTGCTGCACCTTTGTTTA 58.616 42.857 0.00 0.00 0.00 2.01
585 586 6.100424 CCCAGTCAAAGATTCCTATTCTAGGT 59.900 42.308 0.35 0.00 46.32 3.08
586 587 7.290248 CCCAGTCAAAGATTCCTATTCTAGGTA 59.710 40.741 0.35 0.00 46.32 3.08
590 591 7.509659 GTCAAAGATTCCTATTCTAGGTAGGGA 59.490 40.741 17.05 11.86 46.32 4.20
593 594 5.622204 AGATTCCTATTCTAGGTAGGGAGGT 59.378 44.000 17.05 1.16 46.32 3.85
620 621 1.142060 ACCTTCGAATGGTGTTGGTCA 59.858 47.619 15.63 0.00 36.30 4.02
640 641 3.118555 TCATACGGACCATGAACGGATTT 60.119 43.478 0.00 0.00 29.55 2.17
760 761 4.476846 TGGTAAGCCCATCTTTCTCCATAA 59.523 41.667 0.00 0.00 38.72 1.90
781 782 4.010667 AGAAAGTGTTACGGGCACATAA 57.989 40.909 8.52 0.00 39.17 1.90
783 784 4.822896 AGAAAGTGTTACGGGCACATAAAA 59.177 37.500 8.52 0.00 39.17 1.52
827 828 0.537600 AGCGAAGGCCGAGCTATAGA 60.538 55.000 18.61 0.00 39.74 1.98
831 832 2.425312 CGAAGGCCGAGCTATAGATCAT 59.575 50.000 17.66 0.00 41.76 2.45
837 838 3.057245 GCCGAGCTATAGATCATGTGACA 60.057 47.826 17.66 0.00 0.00 3.58
868 869 4.684134 TGGCTGGCTGGGCTTTCC 62.684 66.667 2.00 0.00 0.00 3.13
977 978 9.890915 AACCCTATTTATATGATTTTTAGGGCA 57.109 29.630 11.18 0.00 45.49 5.36
993 994 0.927029 GGCATCTTTCCCCCTAACCT 59.073 55.000 0.00 0.00 0.00 3.50
997 998 0.804255 TCTTTCCCCCTAACCTCCCT 59.196 55.000 0.00 0.00 0.00 4.20
999 1000 2.391389 TCTTTCCCCCTAACCTCCCTTA 59.609 50.000 0.00 0.00 0.00 2.69
1022 1023 0.691078 TTTAGGAGCGGGATCTGCCT 60.691 55.000 6.83 0.00 36.66 4.75
1029 1030 0.466124 GCGGGATCTGCCTAAGAACT 59.534 55.000 0.00 0.00 38.79 3.01
1044 1045 2.966915 AGAACTACCTGTGGTGGTACA 58.033 47.619 6.19 0.00 46.53 2.90
1071 1072 4.070552 GACTCCGCAAGCGTCCCT 62.071 66.667 13.80 0.00 37.81 4.20
1078 1079 2.750350 CAAGCGTCCCTCACCCTT 59.250 61.111 0.00 0.00 0.00 3.95
1112 1113 6.319048 ACTCCTCAACCATCACAAGATAAT 57.681 37.500 0.00 0.00 31.88 1.28
1134 1135 3.255888 TGAAGTATGACGCTCTGTGTCTT 59.744 43.478 11.67 8.37 42.71 3.01
1137 1138 3.756963 AGTATGACGCTCTGTGTCTTACA 59.243 43.478 25.01 6.50 46.49 2.41
1156 1157 9.046296 GTCTTACACTATTGGTCATATTTCCTG 57.954 37.037 0.00 0.00 0.00 3.86
1249 1251 3.046390 CTGAGAATGATTCGAGCCGTAC 58.954 50.000 0.00 0.00 34.02 3.67
1258 1261 1.213537 CGAGCCGTACGAGGGAAAA 59.786 57.895 18.76 0.00 0.00 2.29
1372 1377 3.422204 GGCCTACCCATCCCAACA 58.578 61.111 0.00 0.00 0.00 3.33
1539 1546 0.700564 ATTGATCCAGTGCCCAGTGT 59.299 50.000 2.74 0.00 0.00 3.55
1650 1658 7.566658 TTTGGAATATTTGGGATTTTCCAGT 57.433 32.000 9.69 0.00 44.72 4.00
1696 1708 2.273449 GGTGGCCATGAGACAGGG 59.727 66.667 9.72 0.00 38.46 4.45
1697 1709 2.273449 GTGGCCATGAGACAGGGG 59.727 66.667 9.72 0.00 35.67 4.79
1769 1784 4.448210 AGGCTGTTGACGTTCTTCTTTTA 58.552 39.130 0.00 0.00 0.00 1.52
1821 1836 1.032114 GGGCGAAAGATTCACCCCAG 61.032 60.000 5.09 0.00 44.60 4.45
2104 2124 1.195448 CGCTGTCATCTTCACCAACAC 59.805 52.381 0.00 0.00 0.00 3.32
2155 2175 3.636231 CCACTCTCCCGCAACCCA 61.636 66.667 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.853555 GGAAACAACAACATACATATCATCAAA 57.146 29.630 0.00 0.00 0.00 2.69
16 17 8.465999 GGGAAACAACAACATACATATCATCAA 58.534 33.333 0.00 0.00 0.00 2.57
17 18 7.833682 AGGGAAACAACAACATACATATCATCA 59.166 33.333 0.00 0.00 0.00 3.07
18 19 8.225603 AGGGAAACAACAACATACATATCATC 57.774 34.615 0.00 0.00 0.00 2.92
19 20 8.593945 AAGGGAAACAACAACATACATATCAT 57.406 30.769 0.00 0.00 0.00 2.45
20 21 9.173021 CTAAGGGAAACAACAACATACATATCA 57.827 33.333 0.00 0.00 0.00 2.15
21 22 9.174166 ACTAAGGGAAACAACAACATACATATC 57.826 33.333 0.00 0.00 0.00 1.63
22 23 8.956426 CACTAAGGGAAACAACAACATACATAT 58.044 33.333 0.00 0.00 0.00 1.78
23 24 7.392113 CCACTAAGGGAAACAACAACATACATA 59.608 37.037 0.00 0.00 0.00 2.29
24 25 6.208599 CCACTAAGGGAAACAACAACATACAT 59.791 38.462 0.00 0.00 0.00 2.29
25 26 5.533154 CCACTAAGGGAAACAACAACATACA 59.467 40.000 0.00 0.00 0.00 2.29
26 27 5.533528 ACCACTAAGGGAAACAACAACATAC 59.466 40.000 0.00 0.00 43.89 2.39
27 28 5.533154 CACCACTAAGGGAAACAACAACATA 59.467 40.000 0.00 0.00 43.89 2.29
28 29 4.340950 CACCACTAAGGGAAACAACAACAT 59.659 41.667 0.00 0.00 43.89 2.71
29 30 3.697045 CACCACTAAGGGAAACAACAACA 59.303 43.478 0.00 0.00 43.89 3.33
30 31 3.697542 ACACCACTAAGGGAAACAACAAC 59.302 43.478 0.00 0.00 43.89 3.32
31 32 3.970842 ACACCACTAAGGGAAACAACAA 58.029 40.909 0.00 0.00 43.89 2.83
32 33 3.655615 ACACCACTAAGGGAAACAACA 57.344 42.857 0.00 0.00 43.89 3.33
33 34 5.533528 ACATAACACCACTAAGGGAAACAAC 59.466 40.000 0.00 0.00 43.89 3.32
34 35 5.533154 CACATAACACCACTAAGGGAAACAA 59.467 40.000 0.00 0.00 43.89 2.83
35 36 5.067273 CACATAACACCACTAAGGGAAACA 58.933 41.667 0.00 0.00 43.89 2.83
36 37 5.310451 TCACATAACACCACTAAGGGAAAC 58.690 41.667 0.00 0.00 43.89 2.78
37 38 5.570205 TCACATAACACCACTAAGGGAAA 57.430 39.130 0.00 0.00 43.89 3.13
38 39 5.310451 GTTCACATAACACCACTAAGGGAA 58.690 41.667 0.00 0.00 43.89 3.97
39 40 4.561938 CGTTCACATAACACCACTAAGGGA 60.562 45.833 0.00 0.00 43.89 4.20
40 41 3.682858 CGTTCACATAACACCACTAAGGG 59.317 47.826 0.00 0.00 43.89 3.95
41 42 4.151689 CACGTTCACATAACACCACTAAGG 59.848 45.833 0.00 0.00 45.67 2.69
42 43 4.377022 GCACGTTCACATAACACCACTAAG 60.377 45.833 0.00 0.00 0.00 2.18
43 44 3.495377 GCACGTTCACATAACACCACTAA 59.505 43.478 0.00 0.00 0.00 2.24
44 45 3.061322 GCACGTTCACATAACACCACTA 58.939 45.455 0.00 0.00 0.00 2.74
45 46 1.871039 GCACGTTCACATAACACCACT 59.129 47.619 0.00 0.00 0.00 4.00
46 47 1.600013 TGCACGTTCACATAACACCAC 59.400 47.619 0.00 0.00 0.00 4.16
47 48 1.600013 GTGCACGTTCACATAACACCA 59.400 47.619 13.61 0.00 36.97 4.17
48 49 1.871039 AGTGCACGTTCACATAACACC 59.129 47.619 20.25 0.00 39.35 4.16
49 50 3.491639 TGTAGTGCACGTTCACATAACAC 59.508 43.478 20.25 9.79 39.35 3.32
50 51 3.718815 TGTAGTGCACGTTCACATAACA 58.281 40.909 20.25 16.60 39.35 2.41
51 52 4.387559 TCATGTAGTGCACGTTCACATAAC 59.612 41.667 20.25 14.45 39.35 1.89
52 53 4.387559 GTCATGTAGTGCACGTTCACATAA 59.612 41.667 20.25 10.68 39.35 1.90
53 54 3.924073 GTCATGTAGTGCACGTTCACATA 59.076 43.478 20.25 7.17 39.35 2.29
54 55 2.736721 GTCATGTAGTGCACGTTCACAT 59.263 45.455 20.25 15.75 39.35 3.21
55 56 2.131972 GTCATGTAGTGCACGTTCACA 58.868 47.619 20.25 14.20 39.35 3.58
56 57 2.096909 GTGTCATGTAGTGCACGTTCAC 60.097 50.000 10.53 10.53 37.24 3.18
57 58 2.131972 GTGTCATGTAGTGCACGTTCA 58.868 47.619 12.01 12.20 0.00 3.18
58 59 2.404215 AGTGTCATGTAGTGCACGTTC 58.596 47.619 12.01 6.61 38.80 3.95
59 60 2.526304 AGTGTCATGTAGTGCACGTT 57.474 45.000 12.01 0.00 38.80 3.99
60 61 2.223947 TGAAGTGTCATGTAGTGCACGT 60.224 45.455 12.01 2.47 38.80 4.49
61 62 2.155732 GTGAAGTGTCATGTAGTGCACG 59.844 50.000 12.01 0.00 38.80 5.34
62 63 2.480419 GGTGAAGTGTCATGTAGTGCAC 59.520 50.000 9.40 9.40 35.80 4.57
63 64 2.103941 TGGTGAAGTGTCATGTAGTGCA 59.896 45.455 0.00 0.00 35.80 4.57
64 65 2.766313 TGGTGAAGTGTCATGTAGTGC 58.234 47.619 0.00 0.00 35.80 4.40
65 66 4.825422 AGATGGTGAAGTGTCATGTAGTG 58.175 43.478 0.00 0.00 35.80 2.74
66 67 5.489792 AAGATGGTGAAGTGTCATGTAGT 57.510 39.130 0.00 0.00 35.80 2.73
67 68 5.122869 CCAAAGATGGTGAAGTGTCATGTAG 59.877 44.000 0.00 0.00 42.18 2.74
68 69 5.003160 CCAAAGATGGTGAAGTGTCATGTA 58.997 41.667 0.00 0.00 42.18 2.29
69 70 3.822735 CCAAAGATGGTGAAGTGTCATGT 59.177 43.478 0.00 0.00 42.18 3.21
70 71 3.192001 CCCAAAGATGGTGAAGTGTCATG 59.808 47.826 0.00 0.00 46.01 3.07
71 72 3.424703 CCCAAAGATGGTGAAGTGTCAT 58.575 45.455 0.00 0.00 46.01 3.06
72 73 2.862541 CCCAAAGATGGTGAAGTGTCA 58.137 47.619 0.00 0.00 46.01 3.58
73 74 1.541588 GCCCAAAGATGGTGAAGTGTC 59.458 52.381 0.00 0.00 46.01 3.67
74 75 1.145738 AGCCCAAAGATGGTGAAGTGT 59.854 47.619 0.00 0.00 46.01 3.55
75 76 1.915141 AGCCCAAAGATGGTGAAGTG 58.085 50.000 0.00 0.00 46.01 3.16
76 77 3.562176 CCTTAGCCCAAAGATGGTGAAGT 60.562 47.826 0.00 0.00 46.01 3.01
77 78 3.019564 CCTTAGCCCAAAGATGGTGAAG 58.980 50.000 0.00 0.00 46.01 3.02
78 79 2.291540 CCCTTAGCCCAAAGATGGTGAA 60.292 50.000 0.00 0.00 46.01 3.18
79 80 1.284785 CCCTTAGCCCAAAGATGGTGA 59.715 52.381 0.00 0.00 46.01 4.02
80 81 1.284785 TCCCTTAGCCCAAAGATGGTG 59.715 52.381 0.00 0.00 46.01 4.17
81 82 1.681229 TCCCTTAGCCCAAAGATGGT 58.319 50.000 0.00 0.00 46.01 3.55
83 84 2.428530 GCTTTCCCTTAGCCCAAAGATG 59.571 50.000 0.00 0.00 32.45 2.90
84 85 2.042979 TGCTTTCCCTTAGCCCAAAGAT 59.957 45.455 0.00 0.00 37.85 2.40
85 86 1.427368 TGCTTTCCCTTAGCCCAAAGA 59.573 47.619 0.00 0.00 37.85 2.52
86 87 1.923356 TGCTTTCCCTTAGCCCAAAG 58.077 50.000 0.00 0.00 37.85 2.77
87 88 2.566724 CAATGCTTTCCCTTAGCCCAAA 59.433 45.455 0.00 0.00 37.85 3.28
88 89 2.178580 CAATGCTTTCCCTTAGCCCAA 58.821 47.619 0.00 0.00 37.85 4.12
89 90 1.851304 CAATGCTTTCCCTTAGCCCA 58.149 50.000 0.00 0.00 37.85 5.36
90 91 0.461548 GCAATGCTTTCCCTTAGCCC 59.538 55.000 0.00 0.00 37.85 5.19
91 92 1.135721 CTGCAATGCTTTCCCTTAGCC 59.864 52.381 6.82 0.00 37.85 3.93
92 93 2.094675 TCTGCAATGCTTTCCCTTAGC 58.905 47.619 6.82 0.00 39.10 3.09
93 94 3.350833 ACTCTGCAATGCTTTCCCTTAG 58.649 45.455 6.82 0.00 0.00 2.18
94 95 3.439857 ACTCTGCAATGCTTTCCCTTA 57.560 42.857 6.82 0.00 0.00 2.69
95 96 2.299326 ACTCTGCAATGCTTTCCCTT 57.701 45.000 6.82 0.00 0.00 3.95
96 97 3.659183 ATACTCTGCAATGCTTTCCCT 57.341 42.857 6.82 0.00 0.00 4.20
97 98 4.725790 AAATACTCTGCAATGCTTTCCC 57.274 40.909 6.82 0.00 0.00 3.97
98 99 8.840321 TCTAATAAATACTCTGCAATGCTTTCC 58.160 33.333 6.82 0.00 0.00 3.13
101 102 9.565090 TCATCTAATAAATACTCTGCAATGCTT 57.435 29.630 6.82 0.00 0.00 3.91
102 103 9.736414 ATCATCTAATAAATACTCTGCAATGCT 57.264 29.630 6.82 0.00 0.00 3.79
103 104 9.770503 CATCATCTAATAAATACTCTGCAATGC 57.229 33.333 0.00 0.00 0.00 3.56
105 106 9.458727 CCCATCATCTAATAAATACTCTGCAAT 57.541 33.333 0.00 0.00 0.00 3.56
106 107 8.439971 ACCCATCATCTAATAAATACTCTGCAA 58.560 33.333 0.00 0.00 0.00 4.08
107 108 7.977818 ACCCATCATCTAATAAATACTCTGCA 58.022 34.615 0.00 0.00 0.00 4.41
108 109 8.725148 CAACCCATCATCTAATAAATACTCTGC 58.275 37.037 0.00 0.00 0.00 4.26
109 110 8.725148 GCAACCCATCATCTAATAAATACTCTG 58.275 37.037 0.00 0.00 0.00 3.35
110 111 8.664079 AGCAACCCATCATCTAATAAATACTCT 58.336 33.333 0.00 0.00 0.00 3.24
111 112 8.854614 AGCAACCCATCATCTAATAAATACTC 57.145 34.615 0.00 0.00 0.00 2.59
112 113 9.950496 CTAGCAACCCATCATCTAATAAATACT 57.050 33.333 0.00 0.00 0.00 2.12
113 114 9.944376 TCTAGCAACCCATCATCTAATAAATAC 57.056 33.333 0.00 0.00 0.00 1.89
115 116 8.664079 ACTCTAGCAACCCATCATCTAATAAAT 58.336 33.333 0.00 0.00 0.00 1.40
116 117 7.933577 CACTCTAGCAACCCATCATCTAATAAA 59.066 37.037 0.00 0.00 0.00 1.40
117 118 7.290014 TCACTCTAGCAACCCATCATCTAATAA 59.710 37.037 0.00 0.00 0.00 1.40
118 119 6.782494 TCACTCTAGCAACCCATCATCTAATA 59.218 38.462 0.00 0.00 0.00 0.98
119 120 5.604231 TCACTCTAGCAACCCATCATCTAAT 59.396 40.000 0.00 0.00 0.00 1.73
120 121 4.962362 TCACTCTAGCAACCCATCATCTAA 59.038 41.667 0.00 0.00 0.00 2.10
121 122 4.342378 GTCACTCTAGCAACCCATCATCTA 59.658 45.833 0.00 0.00 0.00 1.98
122 123 3.133721 GTCACTCTAGCAACCCATCATCT 59.866 47.826 0.00 0.00 0.00 2.90
123 124 3.118629 TGTCACTCTAGCAACCCATCATC 60.119 47.826 0.00 0.00 0.00 2.92
124 125 2.840038 TGTCACTCTAGCAACCCATCAT 59.160 45.455 0.00 0.00 0.00 2.45
125 126 2.234661 CTGTCACTCTAGCAACCCATCA 59.765 50.000 0.00 0.00 0.00 3.07
126 127 2.497675 TCTGTCACTCTAGCAACCCATC 59.502 50.000 0.00 0.00 0.00 3.51
127 128 2.540383 TCTGTCACTCTAGCAACCCAT 58.460 47.619 0.00 0.00 0.00 4.00
128 129 2.009681 TCTGTCACTCTAGCAACCCA 57.990 50.000 0.00 0.00 0.00 4.51
129 130 2.933056 GCTTCTGTCACTCTAGCAACCC 60.933 54.545 0.00 0.00 0.00 4.11
130 131 2.028567 AGCTTCTGTCACTCTAGCAACC 60.029 50.000 0.00 0.00 34.37 3.77
131 132 3.311486 AGCTTCTGTCACTCTAGCAAC 57.689 47.619 0.00 0.00 34.37 4.17
132 133 5.468540 TTAAGCTTCTGTCACTCTAGCAA 57.531 39.130 0.00 0.00 34.37 3.91
133 134 5.230942 GTTTAAGCTTCTGTCACTCTAGCA 58.769 41.667 0.00 0.00 34.37 3.49
134 135 4.627900 GGTTTAAGCTTCTGTCACTCTAGC 59.372 45.833 0.00 0.00 0.00 3.42
135 136 5.046950 AGGGTTTAAGCTTCTGTCACTCTAG 60.047 44.000 0.00 0.00 0.00 2.43
136 137 4.838986 AGGGTTTAAGCTTCTGTCACTCTA 59.161 41.667 0.00 0.00 0.00 2.43
137 138 3.648545 AGGGTTTAAGCTTCTGTCACTCT 59.351 43.478 0.00 0.00 0.00 3.24
138 139 4.009370 AGGGTTTAAGCTTCTGTCACTC 57.991 45.455 0.00 0.00 0.00 3.51
139 140 4.593634 ACTAGGGTTTAAGCTTCTGTCACT 59.406 41.667 0.00 1.47 0.00 3.41
140 141 4.895961 ACTAGGGTTTAAGCTTCTGTCAC 58.104 43.478 0.00 0.00 0.00 3.67
141 142 5.562298 AACTAGGGTTTAAGCTTCTGTCA 57.438 39.130 0.00 0.00 30.55 3.58
142 143 7.975750 CATAAACTAGGGTTTAAGCTTCTGTC 58.024 38.462 0.00 0.00 46.64 3.51
143 144 7.923414 CATAAACTAGGGTTTAAGCTTCTGT 57.077 36.000 0.00 0.00 46.64 3.41
150 151 7.492352 AATAGCGCATAAACTAGGGTTTAAG 57.508 36.000 11.47 3.31 46.64 1.85
151 152 7.986320 TGTAATAGCGCATAAACTAGGGTTTAA 59.014 33.333 11.47 0.00 46.64 1.52
153 154 6.350906 TGTAATAGCGCATAAACTAGGGTTT 58.649 36.000 11.47 0.00 46.06 3.27
154 155 5.920903 TGTAATAGCGCATAAACTAGGGTT 58.079 37.500 11.47 0.00 37.24 4.11
155 156 5.540400 TGTAATAGCGCATAAACTAGGGT 57.460 39.130 11.47 0.00 0.00 4.34
156 157 7.277981 CCTTATGTAATAGCGCATAAACTAGGG 59.722 40.741 11.47 0.00 37.19 3.53
157 158 7.277981 CCCTTATGTAATAGCGCATAAACTAGG 59.722 40.741 11.47 10.31 37.19 3.02
158 159 7.817962 ACCCTTATGTAATAGCGCATAAACTAG 59.182 37.037 11.47 0.00 37.19 2.57
159 160 7.673180 ACCCTTATGTAATAGCGCATAAACTA 58.327 34.615 11.47 0.00 37.19 2.24
160 161 6.531021 ACCCTTATGTAATAGCGCATAAACT 58.469 36.000 11.47 0.00 37.19 2.66
161 162 6.796705 ACCCTTATGTAATAGCGCATAAAC 57.203 37.500 11.47 2.78 37.19 2.01
162 163 7.499563 TCAAACCCTTATGTAATAGCGCATAAA 59.500 33.333 11.47 0.00 37.19 1.40
163 164 6.993308 TCAAACCCTTATGTAATAGCGCATAA 59.007 34.615 11.47 2.59 36.50 1.90
164 165 6.425721 GTCAAACCCTTATGTAATAGCGCATA 59.574 38.462 11.47 0.00 0.00 3.14
165 166 5.238650 GTCAAACCCTTATGTAATAGCGCAT 59.761 40.000 11.47 0.00 0.00 4.73
166 167 4.573201 GTCAAACCCTTATGTAATAGCGCA 59.427 41.667 11.47 0.00 0.00 6.09
167 168 4.814771 AGTCAAACCCTTATGTAATAGCGC 59.185 41.667 0.00 0.00 0.00 5.92
168 169 6.238374 CCAAGTCAAACCCTTATGTAATAGCG 60.238 42.308 0.00 0.00 0.00 4.26
169 170 6.826741 TCCAAGTCAAACCCTTATGTAATAGC 59.173 38.462 0.00 0.00 0.00 2.97
170 171 8.980481 ATCCAAGTCAAACCCTTATGTAATAG 57.020 34.615 0.00 0.00 0.00 1.73
179 180 9.936329 AAACATATATATCCAAGTCAAACCCTT 57.064 29.630 0.00 0.00 0.00 3.95
180 181 9.574516 GAAACATATATATCCAAGTCAAACCCT 57.425 33.333 0.00 0.00 0.00 4.34
181 182 9.349713 TGAAACATATATATCCAAGTCAAACCC 57.650 33.333 0.00 0.00 0.00 4.11
223 224 9.647797 TCTGCAAGTACGAAATAAGAATTAAGA 57.352 29.630 0.00 0.00 30.86 2.10
226 227 8.335356 GCATCTGCAAGTACGAAATAAGAATTA 58.665 33.333 0.00 0.00 41.59 1.40
227 228 7.066284 AGCATCTGCAAGTACGAAATAAGAATT 59.934 33.333 4.79 0.00 45.16 2.17
228 229 6.540189 AGCATCTGCAAGTACGAAATAAGAAT 59.460 34.615 4.79 0.00 45.16 2.40
229 230 5.874810 AGCATCTGCAAGTACGAAATAAGAA 59.125 36.000 4.79 0.00 45.16 2.52
230 231 5.419542 AGCATCTGCAAGTACGAAATAAGA 58.580 37.500 4.79 0.00 45.16 2.10
231 232 5.725110 AGCATCTGCAAGTACGAAATAAG 57.275 39.130 4.79 0.00 45.16 1.73
232 233 5.673568 GCAAGCATCTGCAAGTACGAAATAA 60.674 40.000 4.79 0.00 45.16 1.40
233 234 4.201812 GCAAGCATCTGCAAGTACGAAATA 60.202 41.667 4.79 0.00 45.16 1.40
234 235 3.426695 GCAAGCATCTGCAAGTACGAAAT 60.427 43.478 4.79 0.00 45.16 2.17
235 236 2.095768 GCAAGCATCTGCAAGTACGAAA 60.096 45.455 4.79 0.00 45.16 3.46
236 237 1.464608 GCAAGCATCTGCAAGTACGAA 59.535 47.619 4.79 0.00 45.16 3.85
237 238 1.078709 GCAAGCATCTGCAAGTACGA 58.921 50.000 4.79 0.00 45.16 3.43
238 239 3.593247 GCAAGCATCTGCAAGTACG 57.407 52.632 4.79 0.00 45.16 3.67
245 246 1.664321 CCCCTCTTGCAAGCATCTGC 61.664 60.000 21.99 0.00 42.95 4.26
246 247 1.035932 CCCCCTCTTGCAAGCATCTG 61.036 60.000 21.99 8.46 0.00 2.90
247 248 1.305623 CCCCCTCTTGCAAGCATCT 59.694 57.895 21.99 0.00 0.00 2.90
248 249 0.255890 TACCCCCTCTTGCAAGCATC 59.744 55.000 21.99 0.00 0.00 3.91
249 250 0.704076 TTACCCCCTCTTGCAAGCAT 59.296 50.000 21.99 5.52 0.00 3.79
250 251 0.704076 ATTACCCCCTCTTGCAAGCA 59.296 50.000 21.99 9.71 0.00 3.91
251 252 1.340991 TGATTACCCCCTCTTGCAAGC 60.341 52.381 21.99 4.10 0.00 4.01
252 253 2.806945 TGATTACCCCCTCTTGCAAG 57.193 50.000 20.81 20.81 0.00 4.01
253 254 4.229582 ACTTATGATTACCCCCTCTTGCAA 59.770 41.667 0.00 0.00 0.00 4.08
254 255 3.785887 ACTTATGATTACCCCCTCTTGCA 59.214 43.478 0.00 0.00 0.00 4.08
255 256 4.137543 CACTTATGATTACCCCCTCTTGC 58.862 47.826 0.00 0.00 0.00 4.01
256 257 5.104527 TCACACTTATGATTACCCCCTCTTG 60.105 44.000 0.00 0.00 0.00 3.02
257 258 5.036916 TCACACTTATGATTACCCCCTCTT 58.963 41.667 0.00 0.00 0.00 2.85
258 259 4.631234 TCACACTTATGATTACCCCCTCT 58.369 43.478 0.00 0.00 0.00 3.69
259 260 4.202367 CCTCACACTTATGATTACCCCCTC 60.202 50.000 0.00 0.00 0.00 4.30
260 261 3.716872 CCTCACACTTATGATTACCCCCT 59.283 47.826 0.00 0.00 0.00 4.79
261 262 3.747708 GCCTCACACTTATGATTACCCCC 60.748 52.174 0.00 0.00 0.00 5.40
262 263 3.136626 AGCCTCACACTTATGATTACCCC 59.863 47.826 0.00 0.00 0.00 4.95
263 264 4.423625 AGCCTCACACTTATGATTACCC 57.576 45.455 0.00 0.00 0.00 3.69
264 265 5.186198 ACAAGCCTCACACTTATGATTACC 58.814 41.667 0.00 0.00 0.00 2.85
265 266 6.371548 TGAACAAGCCTCACACTTATGATTAC 59.628 38.462 0.00 0.00 0.00 1.89
266 267 6.472016 TGAACAAGCCTCACACTTATGATTA 58.528 36.000 0.00 0.00 0.00 1.75
267 268 5.316167 TGAACAAGCCTCACACTTATGATT 58.684 37.500 0.00 0.00 0.00 2.57
268 269 4.910195 TGAACAAGCCTCACACTTATGAT 58.090 39.130 0.00 0.00 0.00 2.45
269 270 4.350368 TGAACAAGCCTCACACTTATGA 57.650 40.909 0.00 0.00 0.00 2.15
270 271 4.516698 ACTTGAACAAGCCTCACACTTATG 59.483 41.667 13.50 0.00 41.99 1.90
271 272 4.718961 ACTTGAACAAGCCTCACACTTAT 58.281 39.130 13.50 0.00 41.99 1.73
272 273 4.150897 ACTTGAACAAGCCTCACACTTA 57.849 40.909 13.50 0.00 41.99 2.24
273 274 3.004752 ACTTGAACAAGCCTCACACTT 57.995 42.857 13.50 0.00 41.99 3.16
274 275 2.717639 ACTTGAACAAGCCTCACACT 57.282 45.000 13.50 0.00 41.99 3.55
275 276 4.127171 TCTTACTTGAACAAGCCTCACAC 58.873 43.478 13.50 0.00 41.99 3.82
276 277 4.415881 TCTTACTTGAACAAGCCTCACA 57.584 40.909 13.50 0.00 41.99 3.58
277 278 5.096954 GTTCTTACTTGAACAAGCCTCAC 57.903 43.478 13.50 2.68 44.00 3.51
286 287 5.355910 TCTTGGGTGTTGTTCTTACTTGAAC 59.644 40.000 0.00 0.00 44.60 3.18
287 288 5.502079 TCTTGGGTGTTGTTCTTACTTGAA 58.498 37.500 0.00 0.00 0.00 2.69
288 289 5.105567 TCTTGGGTGTTGTTCTTACTTGA 57.894 39.130 0.00 0.00 0.00 3.02
289 290 5.357032 AGTTCTTGGGTGTTGTTCTTACTTG 59.643 40.000 0.00 0.00 0.00 3.16
290 291 5.506708 AGTTCTTGGGTGTTGTTCTTACTT 58.493 37.500 0.00 0.00 0.00 2.24
291 292 5.112129 AGTTCTTGGGTGTTGTTCTTACT 57.888 39.130 0.00 0.00 0.00 2.24
292 293 6.053650 ACTAGTTCTTGGGTGTTGTTCTTAC 58.946 40.000 0.00 0.00 0.00 2.34
293 294 6.243216 ACTAGTTCTTGGGTGTTGTTCTTA 57.757 37.500 0.00 0.00 0.00 2.10
294 295 5.112129 ACTAGTTCTTGGGTGTTGTTCTT 57.888 39.130 0.00 0.00 0.00 2.52
295 296 4.444449 GGACTAGTTCTTGGGTGTTGTTCT 60.444 45.833 0.00 0.00 0.00 3.01
296 297 3.813724 GGACTAGTTCTTGGGTGTTGTTC 59.186 47.826 0.00 0.00 0.00 3.18
297 298 3.201266 TGGACTAGTTCTTGGGTGTTGTT 59.799 43.478 2.07 0.00 0.00 2.83
298 299 2.775384 TGGACTAGTTCTTGGGTGTTGT 59.225 45.455 2.07 0.00 0.00 3.32
299 300 3.139077 GTGGACTAGTTCTTGGGTGTTG 58.861 50.000 2.07 0.00 0.00 3.33
300 301 2.105993 GGTGGACTAGTTCTTGGGTGTT 59.894 50.000 2.07 0.00 0.00 3.32
301 302 1.697982 GGTGGACTAGTTCTTGGGTGT 59.302 52.381 2.07 0.00 0.00 4.16
302 303 1.003233 GGGTGGACTAGTTCTTGGGTG 59.997 57.143 2.07 0.00 0.00 4.61
303 304 1.359168 GGGTGGACTAGTTCTTGGGT 58.641 55.000 2.07 0.00 0.00 4.51
304 305 1.003233 GTGGGTGGACTAGTTCTTGGG 59.997 57.143 2.07 0.00 0.00 4.12
305 306 1.697432 TGTGGGTGGACTAGTTCTTGG 59.303 52.381 2.07 0.00 0.00 3.61
306 307 3.703001 ATGTGGGTGGACTAGTTCTTG 57.297 47.619 2.07 0.00 0.00 3.02
307 308 5.030147 TGATATGTGGGTGGACTAGTTCTT 58.970 41.667 2.07 0.00 0.00 2.52
308 309 4.620723 TGATATGTGGGTGGACTAGTTCT 58.379 43.478 2.07 0.00 0.00 3.01
309 310 5.353394 TTGATATGTGGGTGGACTAGTTC 57.647 43.478 0.00 0.00 0.00 3.01
310 311 5.772393 TTTGATATGTGGGTGGACTAGTT 57.228 39.130 0.00 0.00 0.00 2.24
311 312 5.975988 ATTTGATATGTGGGTGGACTAGT 57.024 39.130 0.00 0.00 0.00 2.57
312 313 8.156820 TGATAATTTGATATGTGGGTGGACTAG 58.843 37.037 0.00 0.00 0.00 2.57
313 314 8.040002 TGATAATTTGATATGTGGGTGGACTA 57.960 34.615 0.00 0.00 0.00 2.59
314 315 6.910191 TGATAATTTGATATGTGGGTGGACT 58.090 36.000 0.00 0.00 0.00 3.85
315 316 7.581213 TTGATAATTTGATATGTGGGTGGAC 57.419 36.000 0.00 0.00 0.00 4.02
316 317 7.838696 ACTTTGATAATTTGATATGTGGGTGGA 59.161 33.333 0.00 0.00 0.00 4.02
317 318 8.010733 ACTTTGATAATTTGATATGTGGGTGG 57.989 34.615 0.00 0.00 0.00 4.61
320 321 9.663904 CGTTACTTTGATAATTTGATATGTGGG 57.336 33.333 0.00 0.00 0.00 4.61
325 326 9.646336 GCGTTCGTTACTTTGATAATTTGATAT 57.354 29.630 0.00 0.00 0.00 1.63
326 327 7.842239 CGCGTTCGTTACTTTGATAATTTGATA 59.158 33.333 0.00 0.00 0.00 2.15
327 328 6.681178 CGCGTTCGTTACTTTGATAATTTGAT 59.319 34.615 0.00 0.00 0.00 2.57
328 329 6.010675 CGCGTTCGTTACTTTGATAATTTGA 58.989 36.000 0.00 0.00 0.00 2.69
329 330 6.010675 TCGCGTTCGTTACTTTGATAATTTG 58.989 36.000 5.77 0.00 36.96 2.32
330 331 6.155691 TCGCGTTCGTTACTTTGATAATTT 57.844 33.333 5.77 0.00 36.96 1.82
331 332 5.766702 TCGCGTTCGTTACTTTGATAATT 57.233 34.783 5.77 0.00 36.96 1.40
332 333 5.766702 TTCGCGTTCGTTACTTTGATAAT 57.233 34.783 5.77 0.00 36.96 1.28
333 334 5.345472 TGATTCGCGTTCGTTACTTTGATAA 59.655 36.000 5.77 0.00 36.96 1.75
334 335 4.858140 TGATTCGCGTTCGTTACTTTGATA 59.142 37.500 5.77 0.00 36.96 2.15
335 336 3.676172 TGATTCGCGTTCGTTACTTTGAT 59.324 39.130 5.77 0.00 36.96 2.57
336 337 3.051327 TGATTCGCGTTCGTTACTTTGA 58.949 40.909 5.77 0.00 36.96 2.69
337 338 3.427516 TGATTCGCGTTCGTTACTTTG 57.572 42.857 5.77 0.00 36.96 2.77
338 339 4.206088 GTTTGATTCGCGTTCGTTACTTT 58.794 39.130 5.77 0.00 36.96 2.66
339 340 3.245754 TGTTTGATTCGCGTTCGTTACTT 59.754 39.130 5.77 0.00 36.96 2.24
340 341 2.796031 TGTTTGATTCGCGTTCGTTACT 59.204 40.909 5.77 0.00 36.96 2.24
341 342 3.158103 TGTTTGATTCGCGTTCGTTAC 57.842 42.857 5.77 5.17 36.96 2.50
342 343 3.856104 TTGTTTGATTCGCGTTCGTTA 57.144 38.095 5.77 0.00 36.96 3.18
343 344 2.741122 TTGTTTGATTCGCGTTCGTT 57.259 40.000 5.77 0.00 36.96 3.85
344 345 2.741122 TTTGTTTGATTCGCGTTCGT 57.259 40.000 5.77 0.00 36.96 3.85
345 346 5.018869 TCATATTTGTTTGATTCGCGTTCG 58.981 37.500 5.77 0.00 0.00 3.95
346 347 6.686679 TCATCATATTTGTTTGATTCGCGTTC 59.313 34.615 5.77 5.37 30.24 3.95
347 348 6.550843 TCATCATATTTGTTTGATTCGCGTT 58.449 32.000 5.77 0.00 30.24 4.84
348 349 6.117911 TCATCATATTTGTTTGATTCGCGT 57.882 33.333 5.77 0.00 30.24 6.01
349 350 7.166307 ACATTCATCATATTTGTTTGATTCGCG 59.834 33.333 0.00 0.00 30.24 5.87
350 351 8.263950 CACATTCATCATATTTGTTTGATTCGC 58.736 33.333 0.00 0.00 30.24 4.70
351 352 9.505995 TCACATTCATCATATTTGTTTGATTCG 57.494 29.630 0.00 0.00 30.24 3.34
358 359 9.671279 TGTCTAGTCACATTCATCATATTTGTT 57.329 29.630 0.00 0.00 0.00 2.83
359 360 9.671279 TTGTCTAGTCACATTCATCATATTTGT 57.329 29.630 0.00 0.00 0.00 2.83
365 366 8.680903 GGAATTTTGTCTAGTCACATTCATCAT 58.319 33.333 16.35 0.00 0.00 2.45
366 367 7.121168 GGGAATTTTGTCTAGTCACATTCATCA 59.879 37.037 16.35 0.00 0.00 3.07
367 368 7.475840 GGGAATTTTGTCTAGTCACATTCATC 58.524 38.462 16.35 8.90 0.00 2.92
368 369 6.094048 CGGGAATTTTGTCTAGTCACATTCAT 59.906 38.462 16.35 0.00 0.00 2.57
369 370 5.411361 CGGGAATTTTGTCTAGTCACATTCA 59.589 40.000 16.35 0.00 0.00 2.57
370 371 5.411669 ACGGGAATTTTGTCTAGTCACATTC 59.588 40.000 10.35 10.35 0.00 2.67
371 372 5.181245 CACGGGAATTTTGTCTAGTCACATT 59.819 40.000 0.00 0.00 0.00 2.71
372 373 4.695455 CACGGGAATTTTGTCTAGTCACAT 59.305 41.667 0.00 0.00 0.00 3.21
373 374 4.062293 CACGGGAATTTTGTCTAGTCACA 58.938 43.478 0.00 0.00 0.00 3.58
374 375 4.062991 ACACGGGAATTTTGTCTAGTCAC 58.937 43.478 0.00 0.00 0.00 3.67
375 376 4.062293 CACACGGGAATTTTGTCTAGTCA 58.938 43.478 0.00 0.00 0.00 3.41
376 377 4.062991 ACACACGGGAATTTTGTCTAGTC 58.937 43.478 0.00 0.00 0.00 2.59
377 378 3.813166 CACACACGGGAATTTTGTCTAGT 59.187 43.478 0.00 0.00 0.00 2.57
378 379 3.813166 ACACACACGGGAATTTTGTCTAG 59.187 43.478 0.00 0.00 0.00 2.43
379 380 3.810941 GACACACACGGGAATTTTGTCTA 59.189 43.478 0.00 0.00 31.25 2.59
380 381 2.616842 GACACACACGGGAATTTTGTCT 59.383 45.455 0.00 0.00 31.25 3.41
381 382 2.287368 GGACACACACGGGAATTTTGTC 60.287 50.000 0.00 0.00 32.79 3.18
382 383 1.679153 GGACACACACGGGAATTTTGT 59.321 47.619 0.00 0.00 0.00 2.83
383 384 1.953686 AGGACACACACGGGAATTTTG 59.046 47.619 0.00 0.00 0.00 2.44
384 385 2.227194 GAGGACACACACGGGAATTTT 58.773 47.619 0.00 0.00 0.00 1.82
385 386 1.142060 TGAGGACACACACGGGAATTT 59.858 47.619 0.00 0.00 0.00 1.82
386 387 0.762418 TGAGGACACACACGGGAATT 59.238 50.000 0.00 0.00 0.00 2.17
387 388 0.762418 TTGAGGACACACACGGGAAT 59.238 50.000 0.00 0.00 0.00 3.01
388 389 0.105964 CTTGAGGACACACACGGGAA 59.894 55.000 0.00 0.00 0.00 3.97
389 390 0.757561 TCTTGAGGACACACACGGGA 60.758 55.000 0.00 0.00 0.00 5.14
390 391 0.105964 TTCTTGAGGACACACACGGG 59.894 55.000 0.00 0.00 0.00 5.28
391 392 1.800586 CATTCTTGAGGACACACACGG 59.199 52.381 0.00 0.00 0.00 4.94
392 393 1.195448 GCATTCTTGAGGACACACACG 59.805 52.381 0.00 0.00 0.00 4.49
393 394 1.195448 CGCATTCTTGAGGACACACAC 59.805 52.381 0.00 0.00 0.00 3.82
394 395 1.202639 ACGCATTCTTGAGGACACACA 60.203 47.619 0.00 0.00 0.00 3.72
395 396 1.512926 ACGCATTCTTGAGGACACAC 58.487 50.000 0.00 0.00 0.00 3.82
396 397 1.872952 CAACGCATTCTTGAGGACACA 59.127 47.619 0.00 0.00 0.00 3.72
397 398 1.400242 GCAACGCATTCTTGAGGACAC 60.400 52.381 0.00 0.00 0.00 3.67
398 399 0.874390 GCAACGCATTCTTGAGGACA 59.126 50.000 0.00 0.00 0.00 4.02
399 400 1.160137 AGCAACGCATTCTTGAGGAC 58.840 50.000 0.00 0.00 0.00 3.85
400 401 1.896220 AAGCAACGCATTCTTGAGGA 58.104 45.000 0.00 0.00 0.00 3.71
401 402 2.744202 AGTAAGCAACGCATTCTTGAGG 59.256 45.455 0.00 0.00 0.00 3.86
402 403 5.725110 ATAGTAAGCAACGCATTCTTGAG 57.275 39.130 0.00 0.00 0.00 3.02
403 404 7.039270 TCTTATAGTAAGCAACGCATTCTTGA 58.961 34.615 0.00 0.00 0.00 3.02
404 405 7.222805 TCTCTTATAGTAAGCAACGCATTCTTG 59.777 37.037 0.00 0.00 0.00 3.02
405 406 7.265673 TCTCTTATAGTAAGCAACGCATTCTT 58.734 34.615 0.00 0.00 0.00 2.52
406 407 6.806751 TCTCTTATAGTAAGCAACGCATTCT 58.193 36.000 0.00 0.00 0.00 2.40
407 408 7.409874 CGATCTCTTATAGTAAGCAACGCATTC 60.410 40.741 0.00 0.00 0.00 2.67
408 409 6.363626 CGATCTCTTATAGTAAGCAACGCATT 59.636 38.462 0.00 0.00 0.00 3.56
409 410 5.859114 CGATCTCTTATAGTAAGCAACGCAT 59.141 40.000 0.00 0.00 0.00 4.73
410 411 5.212934 CGATCTCTTATAGTAAGCAACGCA 58.787 41.667 0.00 0.00 0.00 5.24
411 412 5.213675 ACGATCTCTTATAGTAAGCAACGC 58.786 41.667 0.00 0.00 0.00 4.84
412 413 7.356557 CGAAACGATCTCTTATAGTAAGCAACG 60.357 40.741 0.00 0.00 0.00 4.10
413 414 7.096558 CCGAAACGATCTCTTATAGTAAGCAAC 60.097 40.741 0.00 0.00 0.00 4.17
414 415 6.916387 CCGAAACGATCTCTTATAGTAAGCAA 59.084 38.462 0.00 0.00 0.00 3.91
415 416 6.436261 CCGAAACGATCTCTTATAGTAAGCA 58.564 40.000 0.00 0.00 0.00 3.91
416 417 5.342791 GCCGAAACGATCTCTTATAGTAAGC 59.657 44.000 0.00 0.00 0.00 3.09
417 418 5.857517 GGCCGAAACGATCTCTTATAGTAAG 59.142 44.000 0.00 0.00 0.00 2.34
418 419 5.533903 AGGCCGAAACGATCTCTTATAGTAA 59.466 40.000 0.00 0.00 0.00 2.24
419 420 5.068636 AGGCCGAAACGATCTCTTATAGTA 58.931 41.667 0.00 0.00 0.00 1.82
420 421 3.890147 AGGCCGAAACGATCTCTTATAGT 59.110 43.478 0.00 0.00 0.00 2.12
421 422 4.506886 AGGCCGAAACGATCTCTTATAG 57.493 45.455 0.00 0.00 0.00 1.31
422 423 5.944599 AGATAGGCCGAAACGATCTCTTATA 59.055 40.000 0.00 0.00 0.00 0.98
423 424 4.767928 AGATAGGCCGAAACGATCTCTTAT 59.232 41.667 0.00 0.00 0.00 1.73
424 425 4.142790 AGATAGGCCGAAACGATCTCTTA 58.857 43.478 0.00 0.00 0.00 2.10
425 426 2.959707 AGATAGGCCGAAACGATCTCTT 59.040 45.455 0.00 0.00 0.00 2.85
426 427 2.588620 AGATAGGCCGAAACGATCTCT 58.411 47.619 0.00 0.00 0.00 3.10
427 428 3.372660 AAGATAGGCCGAAACGATCTC 57.627 47.619 0.00 0.00 30.55 2.75
428 429 3.458189 CAAAGATAGGCCGAAACGATCT 58.542 45.455 0.00 0.00 32.70 2.75
429 430 2.032808 GCAAAGATAGGCCGAAACGATC 60.033 50.000 0.00 0.00 0.00 3.69
430 431 1.940613 GCAAAGATAGGCCGAAACGAT 59.059 47.619 0.00 0.00 0.00 3.73
431 432 1.066430 AGCAAAGATAGGCCGAAACGA 60.066 47.619 0.00 0.00 0.00 3.85
432 433 1.369625 AGCAAAGATAGGCCGAAACG 58.630 50.000 0.00 0.00 0.00 3.60
433 434 4.957759 TTTAGCAAAGATAGGCCGAAAC 57.042 40.909 0.00 0.00 0.00 2.78
434 435 5.968528 TTTTTAGCAAAGATAGGCCGAAA 57.031 34.783 0.00 0.00 0.00 3.46
454 455 2.567169 GCAAGGTAGCCCAATCCTTTTT 59.433 45.455 0.00 0.00 39.22 1.94
455 456 2.179427 GCAAGGTAGCCCAATCCTTTT 58.821 47.619 0.00 0.00 39.22 2.27
456 457 1.359130 AGCAAGGTAGCCCAATCCTTT 59.641 47.619 0.00 0.00 39.22 3.11
457 458 1.002857 AGCAAGGTAGCCCAATCCTT 58.997 50.000 0.00 0.00 41.53 3.36
458 459 0.257039 CAGCAAGGTAGCCCAATCCT 59.743 55.000 0.00 0.00 34.23 3.24
459 460 1.387295 GCAGCAAGGTAGCCCAATCC 61.387 60.000 0.00 0.00 34.23 3.01
460 461 0.680921 TGCAGCAAGGTAGCCCAATC 60.681 55.000 0.00 0.00 34.23 2.67
461 462 0.967380 GTGCAGCAAGGTAGCCCAAT 60.967 55.000 0.00 0.00 34.23 3.16
462 463 1.603455 GTGCAGCAAGGTAGCCCAA 60.603 57.895 0.00 0.00 34.23 4.12
463 464 2.034066 GTGCAGCAAGGTAGCCCA 59.966 61.111 0.00 0.00 34.23 5.36
464 465 2.751837 GGTGCAGCAAGGTAGCCC 60.752 66.667 11.86 0.00 34.23 5.19
465 466 0.895559 AAAGGTGCAGCAAGGTAGCC 60.896 55.000 19.63 0.00 34.23 3.93
466 467 0.242017 CAAAGGTGCAGCAAGGTAGC 59.758 55.000 19.63 0.00 0.00 3.58
467 468 1.609208 ACAAAGGTGCAGCAAGGTAG 58.391 50.000 19.63 4.11 0.00 3.18
468 469 2.065899 AACAAAGGTGCAGCAAGGTA 57.934 45.000 19.63 0.00 0.00 3.08
469 470 1.194218 AAACAAAGGTGCAGCAAGGT 58.806 45.000 19.63 9.51 0.00 3.50
470 471 2.362077 AGTAAACAAAGGTGCAGCAAGG 59.638 45.455 19.63 8.84 0.00 3.61
471 472 3.715628 AGTAAACAAAGGTGCAGCAAG 57.284 42.857 19.63 9.58 0.00 4.01
472 473 3.430098 CCAAGTAAACAAAGGTGCAGCAA 60.430 43.478 19.63 0.00 0.00 3.91
473 474 2.100584 CCAAGTAAACAAAGGTGCAGCA 59.899 45.455 19.63 0.00 0.00 4.41
474 475 2.360801 TCCAAGTAAACAAAGGTGCAGC 59.639 45.455 8.11 8.11 0.00 5.25
475 476 3.882888 TCTCCAAGTAAACAAAGGTGCAG 59.117 43.478 0.00 0.00 0.00 4.41
476 477 3.630312 GTCTCCAAGTAAACAAAGGTGCA 59.370 43.478 0.00 0.00 0.00 4.57
477 478 3.630312 TGTCTCCAAGTAAACAAAGGTGC 59.370 43.478 0.00 0.00 0.00 5.01
478 479 5.578776 GTTGTCTCCAAGTAAACAAAGGTG 58.421 41.667 0.00 0.00 33.75 4.00
479 480 4.334481 CGTTGTCTCCAAGTAAACAAAGGT 59.666 41.667 0.00 0.00 33.75 3.50
480 481 4.334481 ACGTTGTCTCCAAGTAAACAAAGG 59.666 41.667 0.00 0.00 36.05 3.11
481 482 5.479716 ACGTTGTCTCCAAGTAAACAAAG 57.520 39.130 0.00 0.00 37.21 2.77
482 483 5.294060 GGTACGTTGTCTCCAAGTAAACAAA 59.706 40.000 0.00 0.00 33.75 2.83
483 484 4.810491 GGTACGTTGTCTCCAAGTAAACAA 59.190 41.667 0.00 0.00 0.00 2.83
484 485 4.370917 GGTACGTTGTCTCCAAGTAAACA 58.629 43.478 0.00 0.00 0.00 2.83
485 486 3.742882 GGGTACGTTGTCTCCAAGTAAAC 59.257 47.826 0.00 0.00 0.00 2.01
486 487 3.552684 CGGGTACGTTGTCTCCAAGTAAA 60.553 47.826 0.00 0.00 34.81 2.01
487 488 2.030007 CGGGTACGTTGTCTCCAAGTAA 60.030 50.000 0.00 0.00 34.81 2.24
488 489 1.541147 CGGGTACGTTGTCTCCAAGTA 59.459 52.381 0.00 0.00 34.81 2.24
489 490 0.316204 CGGGTACGTTGTCTCCAAGT 59.684 55.000 0.00 0.00 34.81 3.16
535 536 3.664107 ACACACATTCGCTCACTTACAT 58.336 40.909 0.00 0.00 0.00 2.29
536 537 3.106242 ACACACATTCGCTCACTTACA 57.894 42.857 0.00 0.00 0.00 2.41
593 594 2.039746 ACACCATTCGAAGGTTGATGGA 59.960 45.455 14.41 0.00 37.23 3.41
620 621 3.202906 CAAATCCGTTCATGGTCCGTAT 58.797 45.455 0.00 0.00 0.00 3.06
690 691 1.501741 CGATTTTGGCGGACTGTGG 59.498 57.895 0.00 0.00 0.00 4.17
760 761 2.561478 ATGTGCCCGTAACACTTTCT 57.439 45.000 0.00 0.00 38.86 2.52
781 782 4.597507 TGAGACTTCCTCTACCCACATTTT 59.402 41.667 0.00 0.00 42.44 1.82
783 784 3.791320 TGAGACTTCCTCTACCCACATT 58.209 45.455 0.00 0.00 42.44 2.71
831 832 1.748939 ACCTTTTCGGTGCATGTCACA 60.749 47.619 17.94 0.00 46.80 3.58
868 869 0.181114 TGATCCGCTTTGATCCAGGG 59.819 55.000 5.60 0.00 40.37 4.45
920 921 3.000041 CCACTTTCATTCGATGTTCCGA 59.000 45.455 0.00 0.00 36.70 4.55
977 978 1.373577 AGGGAGGTTAGGGGGAAAGAT 59.626 52.381 0.00 0.00 0.00 2.40
978 979 0.804255 AGGGAGGTTAGGGGGAAAGA 59.196 55.000 0.00 0.00 0.00 2.52
990 991 3.118371 CGCTCCTAAACATTAAGGGAGGT 60.118 47.826 8.99 0.00 42.54 3.85
993 994 2.171870 CCCGCTCCTAAACATTAAGGGA 59.828 50.000 0.00 0.00 38.62 4.20
997 998 4.703897 CAGATCCCGCTCCTAAACATTAA 58.296 43.478 0.00 0.00 0.00 1.40
999 1000 2.746472 GCAGATCCCGCTCCTAAACATT 60.746 50.000 0.00 0.00 0.00 2.71
1022 1023 4.482030 TGTACCACCACAGGTAGTTCTTA 58.518 43.478 0.00 0.00 44.43 2.10
1029 1030 2.253610 CCTTCTGTACCACCACAGGTA 58.746 52.381 3.61 0.00 44.98 3.08
1044 1045 1.758440 TTGCGGAGTCTGTGCCTTCT 61.758 55.000 0.00 0.00 0.00 2.85
1071 1072 4.166144 AGGAGTTTCTTTCTCAAAGGGTGA 59.834 41.667 0.00 0.00 39.01 4.02
1078 1079 5.110814 TGGTTGAGGAGTTTCTTTCTCAA 57.889 39.130 0.00 0.00 41.96 3.02
1112 1113 2.820197 AGACACAGAGCGTCATACTTCA 59.180 45.455 0.00 0.00 35.77 3.02
1134 1135 6.101150 AGCCAGGAAATATGACCAATAGTGTA 59.899 38.462 0.00 0.00 0.00 2.90
1137 1138 5.103940 ACAGCCAGGAAATATGACCAATAGT 60.104 40.000 0.00 0.00 0.00 2.12
1150 1151 3.294493 GCCGCAACAGCCAGGAAA 61.294 61.111 0.00 0.00 0.00 3.13
1175 1176 3.865830 TTCACACGCGCGCAAACA 61.866 55.556 32.58 8.84 0.00 2.83
1258 1261 4.283212 CCCAAAACAAACTGTATGTGGGAT 59.717 41.667 13.38 0.00 43.26 3.85
1327 1332 5.061311 CACTTCACTTTTGCACTTTCACTTG 59.939 40.000 0.00 0.00 0.00 3.16
1372 1377 1.478654 GCGAATCCCAACATACCCCAT 60.479 52.381 0.00 0.00 0.00 4.00
1382 1387 0.740868 CTGCTCTTCGCGAATCCCAA 60.741 55.000 23.67 6.61 43.27 4.12
1648 1656 2.163818 TTCGCGTTGATTCTTCCACT 57.836 45.000 5.77 0.00 0.00 4.00
1650 1658 1.193650 CGTTTCGCGTTGATTCTTCCA 59.806 47.619 5.77 0.00 35.54 3.53
1751 1766 3.001533 GCGGTAAAAGAAGAACGTCAACA 59.998 43.478 0.00 0.00 0.00 3.33
1759 1774 4.578928 AGCTTTCTTGCGGTAAAAGAAGAA 59.421 37.500 0.00 0.00 42.82 2.52
1769 1784 4.453136 TCGTAAAATTAGCTTTCTTGCGGT 59.547 37.500 0.00 0.00 38.13 5.68
2104 2124 0.995675 ATGGGGGAAGGTGATGGAGG 60.996 60.000 0.00 0.00 0.00 4.30
2155 2175 5.250774 ACCATGTTCAAGTAGAGGGTACAAT 59.749 40.000 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.