Multiple sequence alignment - TraesCS3B01G226300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G226300 chr3B 100.000 8379 0 0 1 8379 314349607 314357985 0.000000e+00 15474.0
1 TraesCS3B01G226300 chr3B 84.211 228 31 3 8133 8359 753955235 753955012 5.090000e-52 217.0
2 TraesCS3B01G226300 chr3B 97.321 112 3 0 8072 8183 314357793 314357904 3.090000e-44 191.0
3 TraesCS3B01G226300 chr3B 97.368 38 1 0 7859 7896 2140163 2140126 1.950000e-06 65.8
4 TraesCS3B01G226300 chr3A 95.330 5075 153 33 1 5009 334174764 334179820 0.000000e+00 7982.0
5 TraesCS3B01G226300 chr3A 95.706 2911 62 26 5007 7863 334179981 334182882 0.000000e+00 4625.0
6 TraesCS3B01G226300 chr3A 88.571 210 23 1 3429 3638 169855786 169855578 3.880000e-63 254.0
7 TraesCS3B01G226300 chr3A 90.055 181 16 2 8192 8370 585605634 585605814 5.060000e-57 233.0
8 TraesCS3B01G226300 chr3A 92.308 39 2 1 7853 7890 44426116 44426154 4.000000e-03 54.7
9 TraesCS3B01G226300 chr3D 96.117 3554 83 18 1283 4803 250048056 250044525 0.000000e+00 5747.0
10 TraesCS3B01G226300 chr3D 95.982 2912 59 25 5007 7863 250044000 250041092 0.000000e+00 4676.0
11 TraesCS3B01G226300 chr3D 95.609 1298 35 4 1 1284 250049506 250048217 0.000000e+00 2061.0
12 TraesCS3B01G226300 chr3D 92.925 212 7 2 4800 5009 250044366 250044161 1.370000e-77 302.0
13 TraesCS3B01G226300 chr3D 91.477 176 13 2 8195 8368 135374575 135374750 3.020000e-59 241.0
14 TraesCS3B01G226300 chr3D 85.321 218 32 0 3425 3642 535391005 535391222 8.460000e-55 226.0
15 TraesCS3B01G226300 chr3D 82.036 167 20 5 2019 2184 380858171 380858014 5.280000e-27 134.0
16 TraesCS3B01G226300 chr3D 100.000 61 0 0 1781 1841 757949 757889 6.870000e-21 113.0
17 TraesCS3B01G226300 chr3D 100.000 61 0 0 1781 1841 440984310 440984370 6.870000e-21 113.0
18 TraesCS3B01G226300 chr3D 89.773 88 7 2 1781 1867 5854551 5854465 2.470000e-20 111.0
19 TraesCS3B01G226300 chr3D 98.361 61 1 0 1781 1841 496780347 496780407 3.200000e-19 108.0
20 TraesCS3B01G226300 chr3D 80.153 131 24 2 2055 2184 349953183 349953312 6.920000e-16 97.1
21 TraesCS3B01G226300 chr3D 95.000 60 3 0 7888 7947 535407375 535407434 2.490000e-15 95.3
22 TraesCS3B01G226300 chr3D 100.000 28 0 0 2159 2186 383521391 383521418 1.500000e-02 52.8
23 TraesCS3B01G226300 chr4A 81.167 377 45 14 3365 3724 631385305 631384938 6.400000e-71 279.0
24 TraesCS3B01G226300 chr4A 87.560 209 25 1 3432 3639 358852477 358852685 3.020000e-59 241.0
25 TraesCS3B01G226300 chr4A 100.000 32 0 0 7860 7891 738499671 738499640 9.080000e-05 60.2
26 TraesCS3B01G226300 chr5A 83.274 281 40 5 8080 8359 8807626 8807900 1.400000e-62 252.0
27 TraesCS3B01G226300 chr5A 100.000 31 0 0 7861 7891 10206042 10206012 3.270000e-04 58.4
28 TraesCS3B01G226300 chr6D 92.941 170 11 1 5799 5968 445038631 445038799 6.500000e-61 246.0
29 TraesCS3B01G226300 chr6D 85.443 158 17 4 8072 8227 454801534 454801381 8.710000e-35 159.0
30 TraesCS3B01G226300 chr6D 100.000 59 0 0 1781 1839 111664985 111665043 8.890000e-20 110.0
31 TraesCS3B01G226300 chr6D 95.522 67 3 0 1781 1847 48673994 48673928 3.200000e-19 108.0
32 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 77937722 77937782 3.200000e-19 108.0
33 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 85800064 85800004 3.200000e-19 108.0
34 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 94623006 94622946 3.200000e-19 108.0
35 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 94662739 94662679 3.200000e-19 108.0
36 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 113507342 113507402 3.200000e-19 108.0
37 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 115323643 115323583 3.200000e-19 108.0
38 TraesCS3B01G226300 chr6D 98.361 61 1 0 1781 1841 126434269 126434209 3.200000e-19 108.0
39 TraesCS3B01G226300 chr6D 94.366 71 3 1 1781 1850 467434076 467434146 3.200000e-19 108.0
40 TraesCS3B01G226300 chr6D 96.491 57 2 0 7892 7948 296563557 296563613 2.490000e-15 95.3
41 TraesCS3B01G226300 chr6D 95.000 60 3 0 7888 7947 355866389 355866448 2.490000e-15 95.3
42 TraesCS3B01G226300 chr6D 93.333 60 4 0 7888 7947 293677795 293677854 1.160000e-13 89.8
43 TraesCS3B01G226300 chr6D 94.643 56 3 0 7892 7947 304117923 304117868 4.170000e-13 87.9
44 TraesCS3B01G226300 chr6D 93.103 58 4 0 7890 7947 95795833 95795776 1.500000e-12 86.1
45 TraesCS3B01G226300 chr6D 91.667 60 5 0 7888 7947 459231009 459230950 5.390000e-12 84.2
46 TraesCS3B01G226300 chr6D 96.000 50 2 0 7892 7941 266799878 266799927 1.940000e-11 82.4
47 TraesCS3B01G226300 chr6D 93.182 44 2 1 7912 7954 299189405 299189448 7.020000e-06 63.9
48 TraesCS3B01G226300 chr6D 100.000 34 0 0 7858 7891 329858474 329858441 7.020000e-06 63.9
49 TraesCS3B01G226300 chr6D 92.683 41 3 0 7905 7945 342830027 342830067 9.080000e-05 60.2
50 TraesCS3B01G226300 chr6D 86.792 53 7 0 7895 7947 424324081 424324029 9.080000e-05 60.2
51 TraesCS3B01G226300 chr6D 100.000 30 0 0 7862 7891 80266080 80266051 1.000000e-03 56.5
52 TraesCS3B01G226300 chr6D 96.970 33 0 1 7858 7890 50647410 50647379 4.000000e-03 54.7
53 TraesCS3B01G226300 chr6D 100.000 28 0 0 7861 7888 27403543 27403570 1.500000e-02 52.8
54 TraesCS3B01G226300 chr6D 100.000 28 0 0 7861 7888 85585035 85585062 1.500000e-02 52.8
55 TraesCS3B01G226300 chr1A 92.308 169 13 0 8193 8361 247344792 247344624 3.020000e-59 241.0
56 TraesCS3B01G226300 chr1A 94.340 106 6 0 8078 8183 247344792 247344687 6.730000e-36 163.0
57 TraesCS3B01G226300 chr1A 93.506 77 3 2 1765 1841 85835109 85835035 6.870000e-21 113.0
58 TraesCS3B01G226300 chr1A 93.243 74 5 0 1781 1854 447117668 447117741 8.890000e-20 110.0
59 TraesCS3B01G226300 chr1A 95.161 62 3 0 7890 7951 118503753 118503692 1.920000e-16 99.0
60 TraesCS3B01G226300 chr1A 92.424 66 4 1 7890 7955 272983478 272983542 8.960000e-15 93.5
61 TraesCS3B01G226300 chr1A 94.595 37 0 1 7859 7895 524028269 524028235 1.000000e-03 56.5
62 TraesCS3B01G226300 chr7B 90.270 185 15 2 8177 8361 22830073 22830254 1.090000e-58 239.0
63 TraesCS3B01G226300 chr7B 89.730 185 16 2 8177 8361 22889860 22890041 5.060000e-57 233.0
64 TraesCS3B01G226300 chr7B 98.529 68 1 0 1773 1840 131744031 131743964 4.110000e-23 121.0
65 TraesCS3B01G226300 chr7B 97.101 69 2 0 1773 1841 131743428 131743360 5.310000e-22 117.0
66 TraesCS3B01G226300 chr7B 98.361 61 1 0 7890 7950 371774261 371774201 3.200000e-19 108.0
67 TraesCS3B01G226300 chr7B 98.305 59 1 0 7892 7950 638164650 638164592 4.140000e-18 104.0
68 TraesCS3B01G226300 chr7B 87.640 89 8 1 7859 7947 243909097 243909012 5.350000e-17 100.0
69 TraesCS3B01G226300 chr7B 88.506 87 5 1 7861 7947 531615314 531615395 5.350000e-17 100.0
70 TraesCS3B01G226300 chr2B 86.283 226 23 6 8135 8359 248103763 248103545 1.090000e-58 239.0
71 TraesCS3B01G226300 chr2B 84.932 219 29 4 3425 3642 520929678 520929893 1.420000e-52 219.0
72 TraesCS3B01G226300 chr2B 83.436 163 25 2 2023 2184 413081264 413081103 5.240000e-32 150.0
73 TraesCS3B01G226300 chr2B 83.871 155 22 1 8080 8234 75846672 75846521 2.440000e-30 145.0
74 TraesCS3B01G226300 chr2B 98.507 67 1 0 1781 1847 406876253 406876187 1.480000e-22 119.0
75 TraesCS3B01G226300 chr2B 92.453 53 3 1 3662 3714 607539852 607539801 3.240000e-09 75.0
76 TraesCS3B01G226300 chr1B 82.270 282 40 6 8080 8359 546861836 546861563 1.410000e-57 235.0
77 TraesCS3B01G226300 chr5B 86.385 213 29 0 3424 3636 112184750 112184962 5.060000e-57 233.0
78 TraesCS3B01G226300 chr5B 87.500 208 18 6 3433 3636 567782189 567781986 5.060000e-57 233.0
79 TraesCS3B01G226300 chr5B 78.696 230 21 12 3971 4182 314306329 314306548 2.450000e-25 128.0
80 TraesCS3B01G226300 chr5B 93.333 75 4 1 1781 1855 221801007 221801080 8.890000e-20 110.0
81 TraesCS3B01G226300 chr5B 95.588 68 3 0 1781 1848 498839772 498839839 8.890000e-20 110.0
82 TraesCS3B01G226300 chr5B 91.358 81 3 2 1781 1857 357912890 357912810 3.200000e-19 108.0
83 TraesCS3B01G226300 chr5B 96.721 61 2 0 7890 7950 671328776 671328716 1.490000e-17 102.0
84 TraesCS3B01G226300 chr5B 94.030 67 3 1 7890 7956 132500983 132500918 5.350000e-17 100.0
85 TraesCS3B01G226300 chr5B 96.610 59 2 0 7892 7950 711422704 711422646 1.920000e-16 99.0
86 TraesCS3B01G226300 chr5B 92.424 66 5 0 7892 7957 479387387 479387322 2.490000e-15 95.3
87 TraesCS3B01G226300 chr5B 90.278 72 5 2 7890 7961 633667182 633667251 8.960000e-15 93.5
88 TraesCS3B01G226300 chr5B 85.227 88 8 3 7860 7947 114930152 114930070 1.500000e-12 86.1
89 TraesCS3B01G226300 chr5B 91.111 45 1 3 7848 7891 454871597 454871555 3.270000e-04 58.4
90 TraesCS3B01G226300 chr5B 97.059 34 1 0 7858 7891 620762662 620762695 3.270000e-04 58.4
91 TraesCS3B01G226300 chr5B 97.059 34 1 0 7858 7891 620763886 620763919 3.270000e-04 58.4
92 TraesCS3B01G226300 chr5B 97.059 34 1 0 7858 7891 620765109 620765142 3.270000e-04 58.4
93 TraesCS3B01G226300 chr5B 97.059 34 1 0 7858 7891 708354994 708354961 3.270000e-04 58.4
94 TraesCS3B01G226300 chr5B 89.130 46 4 1 7855 7900 608626411 608626367 1.000000e-03 56.5
95 TraesCS3B01G226300 chr7A 89.209 139 11 3 3254 3390 137769072 137769208 4.020000e-38 171.0
96 TraesCS3B01G226300 chr7A 95.775 71 2 1 1781 1850 156870517 156870447 6.870000e-21 113.0
97 TraesCS3B01G226300 chr7A 84.848 99 11 4 2091 2187 101274884 101274788 6.920000e-16 97.1
98 TraesCS3B01G226300 chr2D 94.340 106 6 0 8076 8181 585858281 585858176 6.730000e-36 163.0
99 TraesCS3B01G226300 chr2D 92.593 54 3 1 3662 3715 516329477 516329425 9.020000e-10 76.8
100 TraesCS3B01G226300 chr6A 90.678 118 9 2 8067 8183 109488503 109488619 1.130000e-33 156.0
101 TraesCS3B01G226300 chr6A 95.238 63 2 1 7893 7955 74995568 74995507 1.920000e-16 99.0
102 TraesCS3B01G226300 chr6A 94.737 38 1 1 7855 7891 214939681 214939718 3.270000e-04 58.4
103 TraesCS3B01G226300 chr1D 88.462 130 10 3 8080 8208 364623096 364622971 1.460000e-32 152.0
104 TraesCS3B01G226300 chr1D 100.000 61 0 0 1781 1841 494172226 494172166 6.870000e-21 113.0
105 TraesCS3B01G226300 chr1D 96.923 65 1 1 1778 1841 402828986 402829050 3.200000e-19 108.0
106 TraesCS3B01G226300 chr1D 92.105 76 5 1 1777 1852 165548369 165548295 1.150000e-18 106.0
107 TraesCS3B01G226300 chr1D 92.857 70 5 0 1781 1850 467242871 467242802 1.490000e-17 102.0
108 TraesCS3B01G226300 chr1D 95.238 63 3 0 7888 7950 96486357 96486419 5.350000e-17 100.0
109 TraesCS3B01G226300 chr1D 96.610 59 2 0 7890 7948 443556617 443556675 1.920000e-16 99.0
110 TraesCS3B01G226300 chr1D 96.552 58 2 0 7890 7947 17613635 17613692 6.920000e-16 97.1
111 TraesCS3B01G226300 chr1D 95.000 60 3 0 7888 7947 4309104 4309045 2.490000e-15 95.3
112 TraesCS3B01G226300 chr1D 95.000 60 3 0 7888 7947 7179629 7179688 2.490000e-15 95.3
113 TraesCS3B01G226300 chr1D 96.491 57 2 0 7892 7948 217371040 217371096 2.490000e-15 95.3
114 TraesCS3B01G226300 chr1D 96.491 57 2 0 7892 7948 455413906 455413850 2.490000e-15 95.3
115 TraesCS3B01G226300 chr1D 92.424 66 4 1 7890 7955 51571167 51571103 8.960000e-15 93.5
116 TraesCS3B01G226300 chr1D 100.000 34 0 0 7858 7891 116234915 116234948 7.020000e-06 63.9
117 TraesCS3B01G226300 chr1D 100.000 34 0 0 7858 7891 141715471 141715504 7.020000e-06 63.9
118 TraesCS3B01G226300 chr1D 100.000 33 0 0 7859 7891 460251174 460251142 2.530000e-05 62.1
119 TraesCS3B01G226300 chr1D 100.000 31 0 0 7861 7891 294126135 294126165 3.270000e-04 58.4
120 TraesCS3B01G226300 chr1D 100.000 31 0 0 7861 7891 453793079 453793049 3.270000e-04 58.4
121 TraesCS3B01G226300 chr1D 100.000 30 0 0 7862 7891 17873610 17873639 1.000000e-03 56.5
122 TraesCS3B01G226300 chr1D 96.970 33 1 0 2151 2183 22890143 22890111 1.000000e-03 56.5
123 TraesCS3B01G226300 chr7D 80.000 165 30 3 2022 2184 162029491 162029654 1.480000e-22 119.0
124 TraesCS3B01G226300 chr7D 80.864 162 18 4 2024 2184 13358556 13358407 1.910000e-21 115.0
125 TraesCS3B01G226300 chr7D 92.308 78 6 0 1776 1853 429482657 429482580 2.470000e-20 111.0
126 TraesCS3B01G226300 chr7D 96.552 58 2 0 7890 7947 87983420 87983477 6.920000e-16 97.1
127 TraesCS3B01G226300 chr7D 95.082 61 3 0 7890 7950 628561307 628561367 6.920000e-16 97.1
128 TraesCS3B01G226300 chr7D 82.653 98 13 4 2091 2187 99181308 99181214 5.390000e-12 84.2
129 TraesCS3B01G226300 chr7D 94.286 35 2 0 2151 2185 473617567 473617533 4.000000e-03 54.7
130 TraesCS3B01G226300 chr6B 94.521 73 4 0 1781 1853 457875476 457875548 6.870000e-21 113.0
131 TraesCS3B01G226300 chr6B 93.846 65 3 1 7890 7954 234690629 234690566 6.920000e-16 97.1
132 TraesCS3B01G226300 chr5D 77.729 229 22 17 3971 4182 276942316 276942532 6.870000e-21 113.0
133 TraesCS3B01G226300 chr5D 98.413 63 1 0 1781 1843 550008960 550008898 2.470000e-20 111.0
134 TraesCS3B01G226300 chr5D 93.333 75 2 2 1781 1852 414625843 414625917 3.200000e-19 108.0
135 TraesCS3B01G226300 chr5D 95.522 67 3 0 1775 1841 474217056 474217122 3.200000e-19 108.0
136 TraesCS3B01G226300 chr5D 100.000 33 0 0 7859 7891 76023933 76023901 2.530000e-05 62.1
137 TraesCS3B01G226300 chr5D 100.000 32 0 0 7860 7891 263443469 263443500 9.080000e-05 60.2
138 TraesCS3B01G226300 chr4D 93.421 76 5 0 1781 1856 57872918 57872993 6.870000e-21 113.0
139 TraesCS3B01G226300 chr4D 98.387 62 1 0 1781 1842 224439494 224439433 8.890000e-20 110.0
140 TraesCS3B01G226300 chr4D 94.366 71 4 0 1781 1851 297226513 297226583 8.890000e-20 110.0
141 TraesCS3B01G226300 chr4D 96.774 62 2 0 1781 1842 278710908 278710969 4.140000e-18 104.0
142 TraesCS3B01G226300 chr4D 96.552 58 1 1 7890 7947 52676264 52676208 2.490000e-15 95.3
143 TraesCS3B01G226300 chr4D 90.278 72 5 2 7888 7959 23352665 23352734 8.960000e-15 93.5
144 TraesCS3B01G226300 chr4D 97.222 36 1 0 7855 7890 137728720 137728685 2.530000e-05 62.1
145 TraesCS3B01G226300 chr4D 100.000 30 0 0 7862 7891 461513260 461513231 1.000000e-03 56.5
146 TraesCS3B01G226300 chr2A 89.773 88 4 4 1759 1841 375920647 375920734 3.200000e-19 108.0
147 TraesCS3B01G226300 chr2A 91.781 73 5 1 7888 7960 579719293 579719364 5.350000e-17 100.0
148 TraesCS3B01G226300 chr4B 98.333 60 1 0 7892 7951 507249564 507249623 1.150000e-18 106.0
149 TraesCS3B01G226300 chr4B 96.774 62 2 0 7888 7949 139590413 139590474 4.140000e-18 104.0
150 TraesCS3B01G226300 chr4B 98.305 59 1 0 7890 7948 573387282 573387224 4.140000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G226300 chr3B 314349607 314357985 8378 False 7832.5 15474 98.66050 1 8379 2 chr3B.!!$F1 8378
1 TraesCS3B01G226300 chr3A 334174764 334182882 8118 False 6303.5 7982 95.51800 1 7863 2 chr3A.!!$F3 7862
2 TraesCS3B01G226300 chr3D 250041092 250049506 8414 True 3196.5 5747 95.15825 1 7863 4 chr3D.!!$R4 7862

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
665 673 0.179000 CCTGATGGCAGTAGGGTCAC 59.821 60.0 11.01 0.0 40.63 3.67 F
2285 2484 0.038744 CTTGTGACTTCCAGGGGCAT 59.961 55.0 0.00 0.0 0.00 4.40 F
3788 4021 0.116143 AGAACCAGCAGAGGGAGACT 59.884 55.0 0.00 0.0 0.00 3.24 F
4966 5367 0.034059 CGCTTCTGGTCACTCCAAGT 59.966 55.0 0.00 0.0 46.59 3.16 F
6226 6827 0.251354 ACTGCAATGCGAGATCCTGT 59.749 50.0 10.68 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2611 2810 1.277557 AGATGTGAGGGCAGAACTGAC 59.722 52.381 5.97 2.19 38.06 3.51 R
3918 4151 0.112995 AAGGAGCATTGCAACCCTCA 59.887 50.000 22.43 0.00 0.00 3.86 R
5505 6074 3.243737 ACGTCTGCTTGTGAGATGTTGTA 60.244 43.478 0.00 0.00 36.47 2.41 R
6918 7529 4.076394 GGCAACTTAGTCACCATTGGTAA 58.924 43.478 8.31 0.00 32.11 2.85 R
8041 8666 0.032813 CCTTGTCCTCCTACCCGGTA 60.033 60.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.335711 GCCAAGGGCCAGTATCCT 58.664 61.111 6.18 0.00 44.06 3.24
37 38 5.163152 CCAGTATCCTGCCCTTTATTTCTCT 60.163 44.000 0.00 0.00 37.38 3.10
127 134 0.661020 CGAACCGACAAAGCAACCTT 59.339 50.000 0.00 0.00 0.00 3.50
148 155 7.408543 ACCTTAACCTATACAGACTAGACACA 58.591 38.462 0.00 0.00 0.00 3.72
229 236 6.295349 CCGGACTAGTAATTTCCTAGCATGAT 60.295 42.308 0.00 0.00 36.23 2.45
296 303 2.030363 TGTCCAAGCCAATTAGCAAACG 60.030 45.455 0.00 0.00 34.23 3.60
367 375 5.003804 ACCACAAGATTACCTAACAAGCTG 58.996 41.667 0.00 0.00 0.00 4.24
376 384 7.928706 AGATTACCTAACAAGCTGTATGATGTC 59.071 37.037 0.00 0.00 0.00 3.06
480 488 1.696336 ACAACTGAGCTCCATCTGTGT 59.304 47.619 12.15 4.14 32.42 3.72
621 629 8.331742 GTTTCTACTATGCAGCTTTGTATTCTC 58.668 37.037 0.00 0.00 0.00 2.87
665 673 0.179000 CCTGATGGCAGTAGGGTCAC 59.821 60.000 11.01 0.00 40.63 3.67
674 682 0.250166 AGTAGGGTCACACGGTTTGC 60.250 55.000 0.00 0.00 0.00 3.68
731 739 4.885413 TGGCTTCCAATTTTCATCTTGTG 58.115 39.130 0.00 0.00 0.00 3.33
1044 1052 1.911766 ACTGACTGGTGTACCCCCG 60.912 63.158 0.00 0.00 34.29 5.73
1199 1217 0.668535 TCCGTACGATGCAGGATGAG 59.331 55.000 18.76 0.00 39.69 2.90
1248 1266 7.992754 AAAGATGTGAGAAGCTCAACTTATT 57.007 32.000 0.00 0.00 42.46 1.40
1271 1289 7.715265 TTTTCCATGCGCAGTTTTATTTTAA 57.285 28.000 18.32 0.00 0.00 1.52
1303 1483 9.798994 CCTACTAGTTTATTACATTCAACGACT 57.201 33.333 0.00 0.00 0.00 4.18
1401 1581 0.844221 AAGCTCCAGAGAAAGGCCCT 60.844 55.000 0.00 0.00 0.00 5.19
1696 1876 1.126488 TTCCTGCTAGCCATGGAGAG 58.874 55.000 18.40 12.54 0.00 3.20
1847 2039 6.426327 GCTTTGTTGTTGTTGTTGAACTTTT 58.574 32.000 0.00 0.00 32.79 2.27
1964 2156 7.770801 TGAACCAATATAATCAGTCTCAACG 57.229 36.000 0.00 0.00 0.00 4.10
1968 2160 5.454755 CCAATATAATCAGTCTCAACGGGGT 60.455 44.000 0.00 0.00 0.00 4.95
1969 2161 6.239487 CCAATATAATCAGTCTCAACGGGGTA 60.239 42.308 0.00 0.00 0.00 3.69
1970 2162 4.667519 ATAATCAGTCTCAACGGGGTAC 57.332 45.455 0.00 0.00 0.00 3.34
1971 2163 2.233305 ATCAGTCTCAACGGGGTACT 57.767 50.000 0.00 0.00 0.00 2.73
1972 2164 2.885135 TCAGTCTCAACGGGGTACTA 57.115 50.000 0.00 0.00 0.00 1.82
1977 2169 3.573110 AGTCTCAACGGGGTACTATATGC 59.427 47.826 0.00 0.00 0.00 3.14
1978 2170 3.319972 GTCTCAACGGGGTACTATATGCA 59.680 47.826 0.00 0.00 0.00 3.96
1979 2171 3.572682 TCTCAACGGGGTACTATATGCAG 59.427 47.826 0.00 0.00 0.00 4.41
2131 2329 1.610522 CTTGCCAGGTTCACAAGAAGG 59.389 52.381 0.00 0.00 42.71 3.46
2148 2346 6.881602 ACAAGAAGGTGCCAAATTTTTACAAA 59.118 30.769 0.00 0.00 0.00 2.83
2285 2484 0.038744 CTTGTGACTTCCAGGGGCAT 59.961 55.000 0.00 0.00 0.00 4.40
2287 2486 0.618458 TGTGACTTCCAGGGGCATAC 59.382 55.000 0.00 0.00 0.00 2.39
2336 2535 9.466497 AATACATGTTACATGAATTCCACTCTT 57.534 29.630 29.17 7.06 0.00 2.85
2489 2688 6.609237 TGCTCATGCAGTTATTCAGATAAC 57.391 37.500 0.00 1.96 45.31 1.89
2591 2790 0.468226 TTCGACCAGTTGCACCTCTT 59.532 50.000 0.00 0.00 0.00 2.85
2611 2810 3.917329 TCACTTCTTACAGGTCAGACG 57.083 47.619 0.00 0.00 0.00 4.18
2882 3084 4.365899 AGACCGGAAAACTTCAAACAAC 57.634 40.909 9.46 0.00 0.00 3.32
2976 3178 9.624373 ATGAGATGAAAAATGCAGTATAGAACT 57.376 29.630 0.00 0.00 39.81 3.01
3011 3214 7.830940 TCCAATACAAAATTTGCTGCTTATG 57.169 32.000 5.52 0.00 0.00 1.90
3015 3218 5.347012 ACAAAATTTGCTGCTTATGTTGC 57.653 34.783 5.52 0.00 0.00 4.17
3016 3219 4.084433 ACAAAATTTGCTGCTTATGTTGCG 60.084 37.500 5.52 0.00 0.00 4.85
3056 3272 2.700371 TCATGATCCGAGTGCATAAGGT 59.300 45.455 0.00 0.00 0.00 3.50
3285 3508 1.084370 CCGACGAGTCATTCCAAGGC 61.084 60.000 0.00 0.00 0.00 4.35
3528 3751 3.483954 CAGGATGCTTCGGTGGATT 57.516 52.632 0.00 0.00 0.00 3.01
3544 3767 2.221169 GGATTGTAATGCTCATCGGCA 58.779 47.619 0.00 0.00 46.63 5.69
3590 3813 5.068329 CACACTACTTGAGATATCTCTGGCA 59.932 44.000 28.51 10.50 43.25 4.92
3638 3861 8.579863 CCTAAGGATCTTGAAATTGAAACAAGT 58.420 33.333 0.00 0.00 40.89 3.16
3675 3898 0.625849 GAGGGCAGGGGAGAAAATGA 59.374 55.000 0.00 0.00 0.00 2.57
3788 4021 0.116143 AGAACCAGCAGAGGGAGACT 59.884 55.000 0.00 0.00 0.00 3.24
3795 4028 1.700368 CAGAGGGAGACTGGAGGGA 59.300 63.158 0.00 0.00 0.00 4.20
3868 4101 1.194781 GGGGAGAGCAGAACCAGTGA 61.195 60.000 0.00 0.00 0.00 3.41
3885 4118 1.990614 GAAGGGAGAGCGGAAGGGT 60.991 63.158 0.00 0.00 0.00 4.34
3918 4151 4.021925 GCAGAACCAGCGGAGGGT 62.022 66.667 1.50 0.00 41.41 4.34
3988 4221 0.739112 GTCTGGAGCGAGCCTGAAAG 60.739 60.000 5.39 0.00 37.59 2.62
4000 4233 1.140652 GCCTGAAAGCTAGCTCTCCAT 59.859 52.381 19.65 0.00 0.00 3.41
4001 4234 2.421248 GCCTGAAAGCTAGCTCTCCATT 60.421 50.000 19.65 8.14 0.00 3.16
4104 4337 7.673180 AGCACGACTAGTCTAGACTATTCTAT 58.327 38.462 31.50 22.75 42.44 1.98
4226 4462 5.116882 ACTCGTAATCATTGCCCTAAAGTC 58.883 41.667 0.00 0.00 0.00 3.01
4231 4467 5.975693 AATCATTGCCCTAAAGTCGAAAA 57.024 34.783 0.00 0.00 0.00 2.29
4312 4548 5.409826 ACACTAAGAGTTCTAATTGTGCAGC 59.590 40.000 0.00 0.00 0.00 5.25
4377 4614 6.782494 ACTTTCATGGTTTCCCTAACTGATTT 59.218 34.615 0.00 0.00 36.93 2.17
4605 4844 8.758633 ATATGCGTACTACTTTATGAATGGAC 57.241 34.615 0.00 0.00 0.00 4.02
4963 5364 0.539669 TCTCGCTTCTGGTCACTCCA 60.540 55.000 0.00 0.00 45.01 3.86
4964 5365 0.318441 CTCGCTTCTGGTCACTCCAA 59.682 55.000 0.00 0.00 46.59 3.53
4965 5366 0.318441 TCGCTTCTGGTCACTCCAAG 59.682 55.000 0.00 0.00 46.59 3.61
4966 5367 0.034059 CGCTTCTGGTCACTCCAAGT 59.966 55.000 0.00 0.00 46.59 3.16
4967 5368 1.802069 GCTTCTGGTCACTCCAAGTC 58.198 55.000 0.00 0.00 46.59 3.01
4968 5369 1.609320 GCTTCTGGTCACTCCAAGTCC 60.609 57.143 0.00 0.00 46.59 3.85
4991 5392 7.113124 GTCCTAACACTTGTCGTATTATCATCG 59.887 40.741 0.00 0.00 0.00 3.84
5068 5634 6.793518 ATATTCATTCCATCTTCCCTTCCT 57.206 37.500 0.00 0.00 0.00 3.36
5281 5850 6.837992 TGCCTCTATATGTTCGTTTTGTTTC 58.162 36.000 0.00 0.00 0.00 2.78
5409 5978 6.316140 TGGCTATTGCTGATAACACTAGTTTG 59.684 38.462 0.00 0.00 38.00 2.93
5505 6074 5.127682 GCAGTCCCCTGTAAAAATTGATGAT 59.872 40.000 0.00 0.00 41.02 2.45
5637 6220 5.371526 AGGCAGGTATTTGTGTATGATGAG 58.628 41.667 0.00 0.00 0.00 2.90
6143 6744 6.301108 GCGAAGATTTTACGTGTATGTTTGA 58.699 36.000 0.00 0.00 0.00 2.69
6186 6787 3.525268 AACAAACTTGCCTTTGTGGAG 57.475 42.857 5.33 0.00 42.36 3.86
6226 6827 0.251354 ACTGCAATGCGAGATCCTGT 59.749 50.000 10.68 0.00 0.00 4.00
6235 6836 1.685224 GAGATCCTGTGCCCAACCA 59.315 57.895 0.00 0.00 0.00 3.67
6326 6932 1.550327 TGACTTCTGCTCGGATGAGT 58.450 50.000 0.00 0.00 44.48 3.41
6358 6964 2.224066 ACTTCAAACTCCTCGACAGGTG 60.224 50.000 0.00 0.00 41.28 4.00
6371 6977 1.070758 GACAGGTGGCTCTCTGTTCAA 59.929 52.381 10.53 0.00 43.41 2.69
6677 7284 6.782494 TCAGTCCCTGCTATAACTATTGATGA 59.218 38.462 0.00 0.00 0.00 2.92
6763 7370 3.642848 ACAAAGGCAAGTGATTGGTTCAT 59.357 39.130 0.00 0.00 36.54 2.57
6824 7431 6.599638 AGTGGTGCTTTGTTCTCTAATTATCC 59.400 38.462 0.00 0.00 0.00 2.59
6918 7529 5.026121 TCCTACCAGTGAGATCAAACTCAT 58.974 41.667 0.00 0.00 46.36 2.90
7098 7709 2.614057 GGGTTAAGCAAGATGATGGTCG 59.386 50.000 7.03 0.00 0.00 4.79
7333 7946 5.758784 AGGCTAATATTTCTTAACAGGCGAC 59.241 40.000 0.00 0.00 32.85 5.19
7396 8009 8.874816 GTTATCTGAACCTGAGTTGATAAGTTC 58.125 37.037 0.00 0.00 34.26 3.01
7421 8034 6.503524 TCAGCCGAATTTGCTTTATATTTCC 58.496 36.000 1.02 0.00 36.81 3.13
7422 8035 6.096141 TCAGCCGAATTTGCTTTATATTTCCA 59.904 34.615 1.02 0.00 36.81 3.53
7436 8049 9.206870 CTTTATATTTCCAAAGTTGTGTGCATT 57.793 29.630 0.00 0.00 0.00 3.56
7540 8153 4.155462 CAGTGTCCATTCTGATGTTCCTTG 59.845 45.833 0.00 0.00 34.02 3.61
7658 8276 6.668718 TGATATATTATGTTGCAATGGGGCAT 59.331 34.615 0.59 3.40 44.48 4.40
7660 8278 0.464870 TATGTTGCAATGGGGCATGC 59.535 50.000 9.90 9.90 44.48 4.06
7680 8298 1.333791 CGGCTTTTGTTTCTCCGTGAC 60.334 52.381 0.00 0.00 35.75 3.67
7771 8394 4.219725 GCTTAGGAAGGTGCCAAAAATACA 59.780 41.667 0.00 0.00 0.00 2.29
7791 8414 8.519799 AATACATTGTCCTATTTTGAATCGGT 57.480 30.769 0.00 0.00 0.00 4.69
7867 8492 9.993454 AAAAATATAACGGAAGATAGTACTCCC 57.007 33.333 0.00 0.00 0.00 4.30
7868 8493 8.953223 AAATATAACGGAAGATAGTACTCCCT 57.047 34.615 0.00 0.00 0.00 4.20
7869 8494 8.953223 AATATAACGGAAGATAGTACTCCCTT 57.047 34.615 0.00 3.87 0.00 3.95
7870 8495 6.897706 ATAACGGAAGATAGTACTCCCTTC 57.102 41.667 20.48 20.48 35.52 3.46
7871 8496 3.212685 ACGGAAGATAGTACTCCCTTCG 58.787 50.000 21.22 19.00 36.72 3.79
7872 8497 3.212685 CGGAAGATAGTACTCCCTTCGT 58.787 50.000 21.22 6.98 36.72 3.85
7873 8498 3.250521 CGGAAGATAGTACTCCCTTCGTC 59.749 52.174 21.22 12.98 36.72 4.20
7874 8499 3.569277 GGAAGATAGTACTCCCTTCGTCC 59.431 52.174 21.22 16.43 36.72 4.79
7875 8500 2.848691 AGATAGTACTCCCTTCGTCCG 58.151 52.381 0.00 0.00 0.00 4.79
7876 8501 1.878734 GATAGTACTCCCTTCGTCCGG 59.121 57.143 0.00 0.00 0.00 5.14
7877 8502 0.911769 TAGTACTCCCTTCGTCCGGA 59.088 55.000 0.00 0.00 0.00 5.14
7878 8503 0.038744 AGTACTCCCTTCGTCCGGAA 59.961 55.000 5.23 0.00 0.00 4.30
7879 8504 0.890683 GTACTCCCTTCGTCCGGAAA 59.109 55.000 5.23 0.00 33.34 3.13
7880 8505 1.479730 GTACTCCCTTCGTCCGGAAAT 59.520 52.381 5.23 0.00 33.34 2.17
7881 8506 1.856629 ACTCCCTTCGTCCGGAAATA 58.143 50.000 5.23 0.00 33.34 1.40
7882 8507 1.479730 ACTCCCTTCGTCCGGAAATAC 59.520 52.381 5.23 0.00 33.34 1.89
7883 8508 1.755380 CTCCCTTCGTCCGGAAATACT 59.245 52.381 5.23 0.00 33.34 2.12
7884 8509 2.167900 CTCCCTTCGTCCGGAAATACTT 59.832 50.000 5.23 0.00 33.34 2.24
7885 8510 2.093869 TCCCTTCGTCCGGAAATACTTG 60.094 50.000 5.23 0.00 33.34 3.16
7886 8511 2.354403 CCCTTCGTCCGGAAATACTTGT 60.354 50.000 5.23 0.00 33.34 3.16
7887 8512 2.928116 CCTTCGTCCGGAAATACTTGTC 59.072 50.000 5.23 0.00 33.34 3.18
7888 8513 3.581755 CTTCGTCCGGAAATACTTGTCA 58.418 45.455 5.23 0.00 33.34 3.58
7889 8514 3.880047 TCGTCCGGAAATACTTGTCAT 57.120 42.857 5.23 0.00 0.00 3.06
7890 8515 3.777478 TCGTCCGGAAATACTTGTCATC 58.223 45.455 5.23 0.00 0.00 2.92
7891 8516 3.446161 TCGTCCGGAAATACTTGTCATCT 59.554 43.478 5.23 0.00 0.00 2.90
7892 8517 4.641541 TCGTCCGGAAATACTTGTCATCTA 59.358 41.667 5.23 0.00 0.00 1.98
7893 8518 4.976731 CGTCCGGAAATACTTGTCATCTAG 59.023 45.833 5.23 0.00 0.00 2.43
7894 8519 5.220989 CGTCCGGAAATACTTGTCATCTAGA 60.221 44.000 5.23 0.00 0.00 2.43
7895 8520 6.515200 CGTCCGGAAATACTTGTCATCTAGAT 60.515 42.308 5.23 0.00 0.00 1.98
7896 8521 7.308408 CGTCCGGAAATACTTGTCATCTAGATA 60.308 40.741 5.23 0.00 0.00 1.98
7897 8522 7.808856 GTCCGGAAATACTTGTCATCTAGATAC 59.191 40.741 5.23 5.31 0.00 2.24
7898 8523 7.504574 TCCGGAAATACTTGTCATCTAGATACA 59.495 37.037 0.00 7.76 0.00 2.29
7899 8524 8.307483 CCGGAAATACTTGTCATCTAGATACAT 58.693 37.037 4.54 0.54 0.00 2.29
7900 8525 9.347934 CGGAAATACTTGTCATCTAGATACATC 57.652 37.037 4.54 4.50 0.00 3.06
7934 8559 8.741101 TTCATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
7935 8560 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
7936 8561 8.739039 TCATTTTGATGACAAGTATTTTCGGAT 58.261 29.630 0.00 0.00 37.32 4.18
7937 8562 8.800972 CATTTTGATGACAAGTATTTTCGGATG 58.199 33.333 0.00 0.00 37.32 3.51
7938 8563 6.435430 TTGATGACAAGTATTTTCGGATGG 57.565 37.500 0.00 0.00 0.00 3.51
7939 8564 5.739959 TGATGACAAGTATTTTCGGATGGA 58.260 37.500 0.00 0.00 0.00 3.41
7940 8565 5.817296 TGATGACAAGTATTTTCGGATGGAG 59.183 40.000 0.00 0.00 0.00 3.86
7941 8566 4.513442 TGACAAGTATTTTCGGATGGAGG 58.487 43.478 0.00 0.00 0.00 4.30
7942 8567 3.877508 GACAAGTATTTTCGGATGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
7943 8568 3.521937 ACAAGTATTTTCGGATGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
7944 8569 4.130118 CAAGTATTTTCGGATGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
7945 8570 3.385115 AGTATTTTCGGATGGAGGGAGT 58.615 45.455 0.00 0.00 0.00 3.85
7946 8571 4.553678 AGTATTTTCGGATGGAGGGAGTA 58.446 43.478 0.00 0.00 0.00 2.59
7947 8572 4.589374 AGTATTTTCGGATGGAGGGAGTAG 59.411 45.833 0.00 0.00 0.00 2.57
7948 8573 2.544844 TTTCGGATGGAGGGAGTAGT 57.455 50.000 0.00 0.00 0.00 2.73
7949 8574 3.675348 TTTCGGATGGAGGGAGTAGTA 57.325 47.619 0.00 0.00 0.00 1.82
7950 8575 2.953284 TCGGATGGAGGGAGTAGTAG 57.047 55.000 0.00 0.00 0.00 2.57
7951 8576 1.424302 TCGGATGGAGGGAGTAGTAGG 59.576 57.143 0.00 0.00 0.00 3.18
7952 8577 1.145325 CGGATGGAGGGAGTAGTAGGT 59.855 57.143 0.00 0.00 0.00 3.08
7953 8578 2.424523 CGGATGGAGGGAGTAGTAGGTT 60.425 54.545 0.00 0.00 0.00 3.50
7954 8579 3.181436 CGGATGGAGGGAGTAGTAGGTTA 60.181 52.174 0.00 0.00 0.00 2.85
7955 8580 4.508763 CGGATGGAGGGAGTAGTAGGTTAT 60.509 50.000 0.00 0.00 0.00 1.89
7956 8581 5.404395 GGATGGAGGGAGTAGTAGGTTATT 58.596 45.833 0.00 0.00 0.00 1.40
7957 8582 5.481122 GGATGGAGGGAGTAGTAGGTTATTC 59.519 48.000 0.00 0.00 0.00 1.75
7958 8583 5.745988 TGGAGGGAGTAGTAGGTTATTCT 57.254 43.478 0.00 0.00 0.00 2.40
7959 8584 5.703310 TGGAGGGAGTAGTAGGTTATTCTC 58.297 45.833 0.00 0.00 0.00 2.87
7960 8585 5.195146 TGGAGGGAGTAGTAGGTTATTCTCA 59.805 44.000 0.00 0.00 0.00 3.27
7961 8586 6.134754 GGAGGGAGTAGTAGGTTATTCTCAA 58.865 44.000 0.00 0.00 0.00 3.02
7962 8587 6.265876 GGAGGGAGTAGTAGGTTATTCTCAAG 59.734 46.154 0.00 0.00 0.00 3.02
7963 8588 6.982899 AGGGAGTAGTAGGTTATTCTCAAGA 58.017 40.000 0.00 0.00 0.00 3.02
7964 8589 6.834969 AGGGAGTAGTAGGTTATTCTCAAGAC 59.165 42.308 0.00 0.00 0.00 3.01
7965 8590 6.606395 GGGAGTAGTAGGTTATTCTCAAGACA 59.394 42.308 0.00 0.00 0.00 3.41
7966 8591 7.416551 GGGAGTAGTAGGTTATTCTCAAGACAC 60.417 44.444 0.00 0.00 0.00 3.67
7967 8592 7.339976 GGAGTAGTAGGTTATTCTCAAGACACT 59.660 40.741 0.00 0.00 0.00 3.55
7968 8593 9.393512 GAGTAGTAGGTTATTCTCAAGACACTA 57.606 37.037 0.00 0.00 0.00 2.74
7969 8594 9.176460 AGTAGTAGGTTATTCTCAAGACACTAC 57.824 37.037 0.00 0.00 36.49 2.73
7970 8595 7.407393 AGTAGGTTATTCTCAAGACACTACC 57.593 40.000 0.00 0.00 31.21 3.18
7971 8596 7.183460 AGTAGGTTATTCTCAAGACACTACCT 58.817 38.462 0.00 0.00 37.29 3.08
7972 8597 6.936968 AGGTTATTCTCAAGACACTACCTT 57.063 37.500 0.00 0.00 29.56 3.50
7973 8598 7.317722 AGGTTATTCTCAAGACACTACCTTT 57.682 36.000 0.00 0.00 29.56 3.11
7974 8599 7.746703 AGGTTATTCTCAAGACACTACCTTTT 58.253 34.615 0.00 0.00 29.56 2.27
7975 8600 7.661847 AGGTTATTCTCAAGACACTACCTTTTG 59.338 37.037 0.00 0.00 29.56 2.44
7976 8601 7.660208 GGTTATTCTCAAGACACTACCTTTTGA 59.340 37.037 0.00 0.00 0.00 2.69
7977 8602 9.052759 GTTATTCTCAAGACACTACCTTTTGAA 57.947 33.333 0.00 0.00 0.00 2.69
7978 8603 9.793259 TTATTCTCAAGACACTACCTTTTGAAT 57.207 29.630 0.00 0.00 32.69 2.57
7979 8604 7.496529 TTCTCAAGACACTACCTTTTGAATG 57.503 36.000 0.00 0.00 0.00 2.67
7980 8605 6.591935 TCTCAAGACACTACCTTTTGAATGT 58.408 36.000 0.00 0.00 0.00 2.71
7981 8606 7.054124 TCTCAAGACACTACCTTTTGAATGTT 58.946 34.615 0.00 0.00 0.00 2.71
7982 8607 7.012327 TCTCAAGACACTACCTTTTGAATGTTG 59.988 37.037 0.00 0.00 0.00 3.33
7983 8608 6.826231 TCAAGACACTACCTTTTGAATGTTGA 59.174 34.615 0.00 0.00 0.00 3.18
7984 8609 7.338196 TCAAGACACTACCTTTTGAATGTTGAA 59.662 33.333 0.00 0.00 0.00 2.69
7985 8610 7.639113 AGACACTACCTTTTGAATGTTGAAA 57.361 32.000 0.00 0.00 0.00 2.69
7986 8611 8.237811 AGACACTACCTTTTGAATGTTGAAAT 57.762 30.769 0.00 0.00 0.00 2.17
7987 8612 9.349713 AGACACTACCTTTTGAATGTTGAAATA 57.650 29.630 0.00 0.00 0.00 1.40
8004 8629 9.905713 TGTTGAAATATACTCTAATCAAGGCTT 57.094 29.630 0.00 0.00 0.00 4.35
8006 8631 8.908786 TGAAATATACTCTAATCAAGGCTTGG 57.091 34.615 25.92 11.83 0.00 3.61
8007 8632 8.494433 TGAAATATACTCTAATCAAGGCTTGGT 58.506 33.333 25.92 17.88 0.00 3.67
8008 8633 9.343539 GAAATATACTCTAATCAAGGCTTGGTT 57.656 33.333 27.23 27.23 37.77 3.67
8011 8636 9.950496 ATATACTCTAATCAAGGCTTGGTTATG 57.050 33.333 28.02 24.24 35.81 1.90
8012 8637 6.067217 ACTCTAATCAAGGCTTGGTTATGT 57.933 37.500 28.02 24.76 35.81 2.29
8013 8638 6.485171 ACTCTAATCAAGGCTTGGTTATGTT 58.515 36.000 28.02 14.93 35.81 2.71
8014 8639 6.948309 ACTCTAATCAAGGCTTGGTTATGTTT 59.052 34.615 28.02 13.45 35.81 2.83
8015 8640 7.451566 ACTCTAATCAAGGCTTGGTTATGTTTT 59.548 33.333 28.02 11.99 35.81 2.43
8016 8641 8.189119 TCTAATCAAGGCTTGGTTATGTTTTT 57.811 30.769 28.02 7.72 35.81 1.94
8032 8657 2.826979 TTTTTGTAAGTTGACGCGCA 57.173 40.000 5.73 1.71 0.00 6.09
8033 8658 2.826979 TTTTGTAAGTTGACGCGCAA 57.173 40.000 5.73 9.15 0.00 4.85
8034 8659 2.376915 TTTGTAAGTTGACGCGCAAG 57.623 45.000 5.73 0.00 37.12 4.01
8035 8660 0.584396 TTGTAAGTTGACGCGCAAGG 59.416 50.000 5.73 0.00 37.12 3.61
8036 8661 0.531090 TGTAAGTTGACGCGCAAGGT 60.531 50.000 5.73 0.00 37.12 3.50
8037 8662 0.163146 GTAAGTTGACGCGCAAGGTC 59.837 55.000 5.73 7.67 37.12 3.85
8038 8663 1.279527 TAAGTTGACGCGCAAGGTCG 61.280 55.000 5.73 0.00 39.44 4.79
8039 8664 3.335534 GTTGACGCGCAAGGTCGT 61.336 61.111 5.73 0.00 42.09 4.34
8040 8665 3.334751 TTGACGCGCAAGGTCGTG 61.335 61.111 5.73 0.00 44.61 4.35
8052 8677 1.378514 GGTCGTGTACCGGGTAGGA 60.379 63.158 7.25 2.87 45.00 2.94
8053 8678 1.379642 GGTCGTGTACCGGGTAGGAG 61.380 65.000 7.25 1.90 45.00 3.69
8054 8679 1.077501 TCGTGTACCGGGTAGGAGG 60.078 63.158 7.25 3.54 45.00 4.30
8055 8680 1.077501 CGTGTACCGGGTAGGAGGA 60.078 63.158 7.25 0.00 45.00 3.71
8056 8681 1.379642 CGTGTACCGGGTAGGAGGAC 61.380 65.000 7.25 0.00 45.00 3.85
8057 8682 0.323725 GTGTACCGGGTAGGAGGACA 60.324 60.000 7.25 0.04 45.00 4.02
8058 8683 0.409092 TGTACCGGGTAGGAGGACAA 59.591 55.000 7.25 0.00 45.00 3.18
8059 8684 1.109609 GTACCGGGTAGGAGGACAAG 58.890 60.000 7.25 0.00 45.00 3.16
8060 8685 0.032813 TACCGGGTAGGAGGACAAGG 60.033 60.000 6.32 0.00 45.00 3.61
8061 8686 1.305887 CCGGGTAGGAGGACAAGGT 60.306 63.158 0.00 0.00 45.00 3.50
8062 8687 1.328430 CCGGGTAGGAGGACAAGGTC 61.328 65.000 0.00 0.00 45.00 3.85
8063 8688 0.324460 CGGGTAGGAGGACAAGGTCT 60.324 60.000 0.00 0.00 32.47 3.85
8064 8689 1.196012 GGGTAGGAGGACAAGGTCTG 58.804 60.000 0.00 0.00 32.47 3.51
8065 8690 1.552719 GGGTAGGAGGACAAGGTCTGT 60.553 57.143 0.00 0.00 42.61 3.41
8066 8691 1.550976 GGTAGGAGGACAAGGTCTGTG 59.449 57.143 0.00 0.00 38.84 3.66
8067 8692 1.550976 GTAGGAGGACAAGGTCTGTGG 59.449 57.143 0.00 0.00 38.84 4.17
8068 8693 0.104934 AGGAGGACAAGGTCTGTGGT 60.105 55.000 0.00 0.00 38.84 4.16
8069 8694 1.149288 AGGAGGACAAGGTCTGTGGTA 59.851 52.381 0.00 0.00 38.84 3.25
8070 8695 1.550976 GGAGGACAAGGTCTGTGGTAG 59.449 57.143 0.00 0.00 38.84 3.18
8071 8696 0.977395 AGGACAAGGTCTGTGGTAGC 59.023 55.000 0.00 0.00 38.84 3.58
8072 8697 0.977395 GGACAAGGTCTGTGGTAGCT 59.023 55.000 0.00 0.00 38.84 3.32
8073 8698 1.348036 GGACAAGGTCTGTGGTAGCTT 59.652 52.381 0.00 0.00 38.84 3.74
8074 8699 2.224548 GGACAAGGTCTGTGGTAGCTTT 60.225 50.000 0.00 0.00 38.84 3.51
8075 8700 2.808543 GACAAGGTCTGTGGTAGCTTTG 59.191 50.000 0.00 0.00 38.84 2.77
8076 8701 2.438021 ACAAGGTCTGTGGTAGCTTTGA 59.562 45.455 0.00 0.00 36.69 2.69
8077 8702 3.118038 ACAAGGTCTGTGGTAGCTTTGAA 60.118 43.478 0.00 0.00 36.69 2.69
8078 8703 4.074970 CAAGGTCTGTGGTAGCTTTGAAT 58.925 43.478 0.00 0.00 32.58 2.57
8079 8704 4.373156 AGGTCTGTGGTAGCTTTGAATT 57.627 40.909 0.00 0.00 0.00 2.17
8080 8705 5.499004 AGGTCTGTGGTAGCTTTGAATTA 57.501 39.130 0.00 0.00 0.00 1.40
8081 8706 5.246307 AGGTCTGTGGTAGCTTTGAATTAC 58.754 41.667 0.00 0.00 0.00 1.89
8082 8707 5.013183 AGGTCTGTGGTAGCTTTGAATTACT 59.987 40.000 0.00 0.00 0.00 2.24
8083 8708 5.351740 GGTCTGTGGTAGCTTTGAATTACTC 59.648 44.000 0.00 0.00 0.00 2.59
8084 8709 5.351740 GTCTGTGGTAGCTTTGAATTACTCC 59.648 44.000 0.00 0.00 0.00 3.85
8085 8710 4.585879 TGTGGTAGCTTTGAATTACTCCC 58.414 43.478 0.00 0.00 0.00 4.30
8086 8711 4.042311 TGTGGTAGCTTTGAATTACTCCCA 59.958 41.667 0.00 0.00 0.00 4.37
8087 8712 4.395231 GTGGTAGCTTTGAATTACTCCCAC 59.605 45.833 0.00 0.00 32.73 4.61
8088 8713 3.945921 GGTAGCTTTGAATTACTCCCACC 59.054 47.826 0.00 0.00 0.00 4.61
8089 8714 2.711542 AGCTTTGAATTACTCCCACCG 58.288 47.619 0.00 0.00 0.00 4.94
8090 8715 2.039879 AGCTTTGAATTACTCCCACCGT 59.960 45.455 0.00 0.00 0.00 4.83
8091 8716 2.817844 GCTTTGAATTACTCCCACCGTT 59.182 45.455 0.00 0.00 0.00 4.44
8092 8717 3.254903 GCTTTGAATTACTCCCACCGTTT 59.745 43.478 0.00 0.00 0.00 3.60
8093 8718 4.615223 GCTTTGAATTACTCCCACCGTTTC 60.615 45.833 0.00 0.00 0.00 2.78
8094 8719 4.360951 TTGAATTACTCCCACCGTTTCT 57.639 40.909 0.00 0.00 0.00 2.52
8095 8720 5.486735 TTGAATTACTCCCACCGTTTCTA 57.513 39.130 0.00 0.00 0.00 2.10
8096 8721 5.486735 TGAATTACTCCCACCGTTTCTAA 57.513 39.130 0.00 0.00 0.00 2.10
8097 8722 5.867330 TGAATTACTCCCACCGTTTCTAAA 58.133 37.500 0.00 0.00 0.00 1.85
8098 8723 6.478129 TGAATTACTCCCACCGTTTCTAAAT 58.522 36.000 0.00 0.00 0.00 1.40
8099 8724 7.622713 TGAATTACTCCCACCGTTTCTAAATA 58.377 34.615 0.00 0.00 0.00 1.40
8100 8725 8.269317 TGAATTACTCCCACCGTTTCTAAATAT 58.731 33.333 0.00 0.00 0.00 1.28
8101 8726 9.117183 GAATTACTCCCACCGTTTCTAAATATT 57.883 33.333 0.00 0.00 0.00 1.28
8102 8727 9.470399 AATTACTCCCACCGTTTCTAAATATTT 57.530 29.630 5.89 5.89 0.00 1.40
8103 8728 6.753107 ACTCCCACCGTTTCTAAATATTTG 57.247 37.500 11.05 1.65 0.00 2.32
8104 8729 6.243148 ACTCCCACCGTTTCTAAATATTTGT 58.757 36.000 11.05 0.00 0.00 2.83
8105 8730 6.373495 ACTCCCACCGTTTCTAAATATTTGTC 59.627 38.462 11.05 0.00 0.00 3.18
8106 8731 6.478129 TCCCACCGTTTCTAAATATTTGTCT 58.522 36.000 11.05 0.00 0.00 3.41
8107 8732 6.943718 TCCCACCGTTTCTAAATATTTGTCTT 59.056 34.615 11.05 0.00 0.00 3.01
8108 8733 7.449086 TCCCACCGTTTCTAAATATTTGTCTTT 59.551 33.333 11.05 0.00 0.00 2.52
8109 8734 8.085909 CCCACCGTTTCTAAATATTTGTCTTTT 58.914 33.333 11.05 0.00 0.00 2.27
8110 8735 9.471084 CCACCGTTTCTAAATATTTGTCTTTTT 57.529 29.630 11.05 0.00 0.00 1.94
8183 8808 7.093322 AGAGTGTAGATTCATTCATTTTGCC 57.907 36.000 0.00 0.00 0.00 4.52
8184 8809 6.096001 AGAGTGTAGATTCATTCATTTTGCCC 59.904 38.462 0.00 0.00 0.00 5.36
8185 8810 5.954150 AGTGTAGATTCATTCATTTTGCCCT 59.046 36.000 0.00 0.00 0.00 5.19
8186 8811 6.096001 AGTGTAGATTCATTCATTTTGCCCTC 59.904 38.462 0.00 0.00 0.00 4.30
8187 8812 6.096001 GTGTAGATTCATTCATTTTGCCCTCT 59.904 38.462 0.00 0.00 0.00 3.69
8188 8813 6.664816 TGTAGATTCATTCATTTTGCCCTCTT 59.335 34.615 0.00 0.00 0.00 2.85
8189 8814 6.616237 AGATTCATTCATTTTGCCCTCTTT 57.384 33.333 0.00 0.00 0.00 2.52
8190 8815 6.403878 AGATTCATTCATTTTGCCCTCTTTG 58.596 36.000 0.00 0.00 0.00 2.77
8191 8816 5.804944 TTCATTCATTTTGCCCTCTTTGA 57.195 34.783 0.00 0.00 0.00 2.69
8192 8817 5.804944 TCATTCATTTTGCCCTCTTTGAA 57.195 34.783 0.00 0.00 0.00 2.69
8193 8818 6.363167 TCATTCATTTTGCCCTCTTTGAAT 57.637 33.333 0.00 0.00 34.94 2.57
8194 8819 6.771573 TCATTCATTTTGCCCTCTTTGAATT 58.228 32.000 0.00 0.00 32.94 2.17
8195 8820 7.905265 TCATTCATTTTGCCCTCTTTGAATTA 58.095 30.769 0.00 0.00 32.94 1.40
8196 8821 7.818930 TCATTCATTTTGCCCTCTTTGAATTAC 59.181 33.333 0.00 0.00 32.94 1.89
8197 8822 6.916360 TCATTTTGCCCTCTTTGAATTACT 57.084 33.333 0.00 0.00 0.00 2.24
8198 8823 6.924111 TCATTTTGCCCTCTTTGAATTACTC 58.076 36.000 0.00 0.00 0.00 2.59
8199 8824 6.721208 TCATTTTGCCCTCTTTGAATTACTCT 59.279 34.615 0.00 0.00 0.00 3.24
8200 8825 6.575162 TTTTGCCCTCTTTGAATTACTCTC 57.425 37.500 0.00 0.00 0.00 3.20
8201 8826 5.505181 TTGCCCTCTTTGAATTACTCTCT 57.495 39.130 0.00 0.00 0.00 3.10
8202 8827 5.091261 TGCCCTCTTTGAATTACTCTCTC 57.909 43.478 0.00 0.00 0.00 3.20
8203 8828 4.080863 TGCCCTCTTTGAATTACTCTCTCC 60.081 45.833 0.00 0.00 0.00 3.71
8204 8829 4.688021 CCCTCTTTGAATTACTCTCTCCG 58.312 47.826 0.00 0.00 0.00 4.63
8205 8830 4.160626 CCCTCTTTGAATTACTCTCTCCGT 59.839 45.833 0.00 0.00 0.00 4.69
8206 8831 5.337652 CCCTCTTTGAATTACTCTCTCCGTT 60.338 44.000 0.00 0.00 0.00 4.44
8207 8832 6.166982 CCTCTTTGAATTACTCTCTCCGTTT 58.833 40.000 0.00 0.00 0.00 3.60
8208 8833 6.651225 CCTCTTTGAATTACTCTCTCCGTTTT 59.349 38.462 0.00 0.00 0.00 2.43
8209 8834 7.173390 CCTCTTTGAATTACTCTCTCCGTTTTT 59.827 37.037 0.00 0.00 0.00 1.94
8210 8835 9.204570 CTCTTTGAATTACTCTCTCCGTTTTTA 57.795 33.333 0.00 0.00 0.00 1.52
8211 8836 9.550406 TCTTTGAATTACTCTCTCCGTTTTTAA 57.450 29.630 0.00 0.00 0.00 1.52
8221 8846 9.503399 ACTCTCTCCGTTTTTAAATATTTGTCT 57.497 29.630 11.05 0.00 0.00 3.41
8298 8923 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
8299 8924 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
8300 8925 7.828223 AGAGTGTAGATTCATTCATTTTGCTCT 59.172 33.333 0.00 0.00 0.00 4.09
8301 8926 7.759465 AGTGTAGATTCATTCATTTTGCTCTG 58.241 34.615 0.00 0.00 0.00 3.35
8302 8927 7.392673 AGTGTAGATTCATTCATTTTGCTCTGT 59.607 33.333 0.00 0.00 0.00 3.41
8303 8928 8.668353 GTGTAGATTCATTCATTTTGCTCTGTA 58.332 33.333 0.00 0.00 0.00 2.74
8304 8929 9.399797 TGTAGATTCATTCATTTTGCTCTGTAT 57.600 29.630 0.00 0.00 0.00 2.29
8305 8930 9.661187 GTAGATTCATTCATTTTGCTCTGTATG 57.339 33.333 0.00 0.00 0.00 2.39
8306 8931 8.289939 AGATTCATTCATTTTGCTCTGTATGT 57.710 30.769 0.00 0.00 0.00 2.29
8307 8932 9.399797 AGATTCATTCATTTTGCTCTGTATGTA 57.600 29.630 0.00 0.00 0.00 2.29
8308 8933 9.661187 GATTCATTCATTTTGCTCTGTATGTAG 57.339 33.333 0.00 0.00 0.00 2.74
8309 8934 8.565896 TTCATTCATTTTGCTCTGTATGTAGT 57.434 30.769 0.00 0.00 0.00 2.73
8310 8935 8.201554 TCATTCATTTTGCTCTGTATGTAGTC 57.798 34.615 0.00 0.00 0.00 2.59
8311 8936 7.823799 TCATTCATTTTGCTCTGTATGTAGTCA 59.176 33.333 0.00 0.00 0.00 3.41
8312 8937 6.968131 TCATTTTGCTCTGTATGTAGTCAC 57.032 37.500 0.00 0.00 0.00 3.67
8313 8938 6.701340 TCATTTTGCTCTGTATGTAGTCACT 58.299 36.000 0.00 0.00 0.00 3.41
8314 8939 7.161404 TCATTTTGCTCTGTATGTAGTCACTT 58.839 34.615 0.00 0.00 0.00 3.16
8315 8940 6.785488 TTTTGCTCTGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 0.00 3.16
8316 8941 5.468540 TTGCTCTGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 0.00 3.16
8317 8942 5.468540 TGCTCTGTATGTAGTCACTTGTT 57.531 39.130 0.00 0.00 0.00 2.83
8318 8943 5.230182 TGCTCTGTATGTAGTCACTTGTTG 58.770 41.667 0.00 0.00 0.00 3.33
8319 8944 5.010617 TGCTCTGTATGTAGTCACTTGTTGA 59.989 40.000 0.00 0.00 0.00 3.18
8320 8945 5.926542 GCTCTGTATGTAGTCACTTGTTGAA 59.073 40.000 0.00 0.00 35.39 2.69
8321 8946 6.423905 GCTCTGTATGTAGTCACTTGTTGAAA 59.576 38.462 0.00 0.00 35.39 2.69
8322 8947 7.118390 GCTCTGTATGTAGTCACTTGTTGAAAT 59.882 37.037 0.00 0.00 35.39 2.17
8323 8948 8.534333 TCTGTATGTAGTCACTTGTTGAAATC 57.466 34.615 0.00 0.00 35.39 2.17
8324 8949 8.367911 TCTGTATGTAGTCACTTGTTGAAATCT 58.632 33.333 0.00 0.00 35.39 2.40
8325 8950 8.902540 TGTATGTAGTCACTTGTTGAAATCTT 57.097 30.769 0.00 0.00 35.39 2.40
8326 8951 9.337396 TGTATGTAGTCACTTGTTGAAATCTTT 57.663 29.630 0.00 0.00 35.39 2.52
8335 8960 9.581099 TCACTTGTTGAAATCTTTAAAAAGACC 57.419 29.630 7.29 1.91 46.80 3.85
8336 8961 9.364989 CACTTGTTGAAATCTTTAAAAAGACCA 57.635 29.630 7.29 4.19 46.80 4.02
8337 8962 9.936759 ACTTGTTGAAATCTTTAAAAAGACCAA 57.063 25.926 7.29 9.13 46.80 3.67
8353 8978 7.625828 AAAGACCAATATTTAGAAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
8354 8979 5.681639 AGACCAATATTTAGAAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
8355 8980 5.427481 AGACCAATATTTAGAAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
8356 8981 5.681639 ACCAATATTTAGAAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
8357 8982 5.191124 ACCAATATTTAGAAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
8358 8983 6.384886 ACCAATATTTAGAAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
8359 8984 6.704937 CCAATATTTAGAAACGGAGGGAGTAC 59.295 42.308 0.00 0.00 0.00 2.73
8360 8985 7.270047 CAATATTTAGAAACGGAGGGAGTACA 58.730 38.462 0.00 0.00 0.00 2.90
8361 8986 5.750352 ATTTAGAAACGGAGGGAGTACAA 57.250 39.130 0.00 0.00 0.00 2.41
8362 8987 5.750352 TTTAGAAACGGAGGGAGTACAAT 57.250 39.130 0.00 0.00 0.00 2.71
8363 8988 5.750352 TTAGAAACGGAGGGAGTACAATT 57.250 39.130 0.00 0.00 0.00 2.32
8364 8989 4.635699 AGAAACGGAGGGAGTACAATTT 57.364 40.909 0.00 0.00 0.00 1.82
8365 8990 4.324267 AGAAACGGAGGGAGTACAATTTG 58.676 43.478 0.00 0.00 0.00 2.32
8366 8991 3.782656 AACGGAGGGAGTACAATTTGT 57.217 42.857 7.30 7.30 0.00 2.83
8367 8992 3.782656 ACGGAGGGAGTACAATTTGTT 57.217 42.857 7.45 0.00 0.00 2.83
8368 8993 3.671716 ACGGAGGGAGTACAATTTGTTC 58.328 45.455 7.45 2.53 0.00 3.18
8369 8994 3.071892 ACGGAGGGAGTACAATTTGTTCA 59.928 43.478 7.45 0.00 0.00 3.18
8370 8995 3.435671 CGGAGGGAGTACAATTTGTTCAC 59.564 47.826 7.45 1.32 0.00 3.18
8371 8996 3.756963 GGAGGGAGTACAATTTGTTCACC 59.243 47.826 7.45 10.31 30.10 4.02
8372 8997 3.756963 GAGGGAGTACAATTTGTTCACCC 59.243 47.826 24.50 24.50 44.62 4.61
8373 8998 3.763057 GGGAGTACAATTTGTTCACCCT 58.237 45.455 24.57 8.81 42.34 4.34
8374 8999 3.756963 GGGAGTACAATTTGTTCACCCTC 59.243 47.826 24.57 14.64 42.34 4.30
8375 9000 4.506802 GGGAGTACAATTTGTTCACCCTCT 60.507 45.833 24.57 7.99 42.34 3.69
8376 9001 5.070685 GGAGTACAATTTGTTCACCCTCTT 58.929 41.667 7.45 0.00 0.00 2.85
8377 9002 5.048713 GGAGTACAATTTGTTCACCCTCTTG 60.049 44.000 7.45 0.00 0.00 3.02
8378 9003 4.827284 AGTACAATTTGTTCACCCTCTTGG 59.173 41.667 7.45 0.00 41.37 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.121009 GCCGCACAAAATTGTAACGTT 58.879 42.857 5.88 5.88 39.91 3.99
99 106 2.280592 GTCGGTTCGTGGCCTTGT 60.281 61.111 3.32 0.00 0.00 3.16
127 134 6.660800 AGCTGTGTCTAGTCTGTATAGGTTA 58.339 40.000 0.00 0.00 0.00 2.85
148 155 8.063770 TCCTATTACTAGTAGGTTTGGTTAGCT 58.936 37.037 9.53 0.00 39.76 3.32
229 236 2.963548 TGAGTTGGACACGTGTTGTA 57.036 45.000 24.26 9.47 39.17 2.41
296 303 6.106673 TGAGTCTAAGCAGGTTAATTAGTGC 58.893 40.000 7.96 7.96 36.10 4.40
367 375 4.835615 ACATCCACCCTCTAGACATCATAC 59.164 45.833 0.00 0.00 0.00 2.39
376 384 5.015391 ACCCTATACTACATCCACCCTCTAG 59.985 48.000 0.00 0.00 0.00 2.43
452 460 2.225467 GGAGCTCAGTTGTCTGCTTTT 58.775 47.619 17.19 0.00 41.10 2.27
480 488 4.989797 CAGTGTGCCATTATGCAAGAAAAA 59.010 37.500 0.00 0.00 44.11 1.94
674 682 2.096335 TCATGCACGCTGCTCAATTAAG 59.904 45.455 10.54 0.00 45.31 1.85
688 696 0.607489 AAGCTGAGGTGGTCATGCAC 60.607 55.000 0.00 0.00 33.51 4.57
805 813 6.048509 ACTTTGAAGTACAATTGCCAAAAGG 58.951 36.000 5.05 0.00 37.52 3.11
808 816 6.634805 TGAACTTTGAAGTACAATTGCCAAA 58.365 32.000 5.05 7.64 38.57 3.28
1199 1217 4.020128 AGTCCCAAAGTAGACCAATCTGTC 60.020 45.833 0.00 0.00 36.29 3.51
1248 1266 7.148507 CCATTAAAATAAAACTGCGCATGGAAA 60.149 33.333 12.24 0.00 30.83 3.13
1271 1289 9.220906 TGAATGTAATAAACTAGTAGGGTCCAT 57.779 33.333 0.00 0.00 0.00 3.41
1303 1483 8.677300 GCATTTTGATACTCCAATGTAAAGAGA 58.323 33.333 0.00 0.00 0.00 3.10
1401 1581 7.338196 TCTTCTGGTAAATCTTCAACAAACACA 59.662 33.333 0.00 0.00 0.00 3.72
1651 1831 8.748380 ACGTAACAGTATTTACTAAACTCCAC 57.252 34.615 0.00 0.00 34.13 4.02
1652 1832 9.762933 AAACGTAACAGTATTTACTAAACTCCA 57.237 29.630 0.00 0.00 34.13 3.86
1655 1835 9.987272 AGGAAACGTAACAGTATTTACTAAACT 57.013 29.630 0.00 0.00 34.13 2.66
1696 1876 4.142600 GGAGCATGTGTTCCAACTAATGTC 60.143 45.833 10.56 4.43 43.82 3.06
1814 1994 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
1847 2039 9.742144 TTAGTTACATTAAACAGGCTATCCAAA 57.258 29.630 0.00 0.00 33.74 3.28
1964 2156 3.771577 ACTTGCTGCATATAGTACCCC 57.228 47.619 1.84 0.00 0.00 4.95
2188 2387 7.255801 GCTGGAGCTAAAGTCAAGAGATACTAT 60.256 40.741 0.00 0.00 38.21 2.12
2285 2484 4.649674 CCCAAGTTATAGAGACCAGCAGTA 59.350 45.833 0.00 0.00 0.00 2.74
2287 2486 3.181461 CCCCAAGTTATAGAGACCAGCAG 60.181 52.174 0.00 0.00 0.00 4.24
2336 2535 2.104622 TGGAACAGAATGCAGACACTGA 59.895 45.455 15.47 0.00 42.53 3.41
2443 2642 6.349944 GCAAAAGACAATGAGATCACCAAGAT 60.350 38.462 0.00 0.00 40.48 2.40
2489 2688 4.047125 ACCCCATTGCCCCTCACG 62.047 66.667 0.00 0.00 0.00 4.35
2591 2790 3.220110 ACGTCTGACCTGTAAGAAGTGA 58.780 45.455 1.55 0.00 32.60 3.41
2611 2810 1.277557 AGATGTGAGGGCAGAACTGAC 59.722 52.381 5.97 2.19 38.06 3.51
2826 3025 7.985184 AGACTTTGACATAACACTGTAAAGTCA 59.015 33.333 22.99 15.69 42.66 3.41
3011 3214 8.702438 TGAACACTTAAACTATACTTACGCAAC 58.298 33.333 0.00 0.00 0.00 4.17
3056 3272 9.899661 AATGCAACTAGACCTACAATTACATTA 57.100 29.630 0.00 0.00 0.00 1.90
3209 3427 1.407979 CTGCAAAGCAATGGGATCCTC 59.592 52.381 12.58 2.25 38.41 3.71
3285 3508 7.995289 AGTCACAATTAGTCTATGAGTCTCAG 58.005 38.462 8.82 0.00 0.00 3.35
3485 3708 3.714144 AGAAGCTAACTAGGAGCAAGGA 58.286 45.455 18.09 0.00 42.69 3.36
3590 3813 3.702045 GTCTGAGCTACAATGTCTACCCT 59.298 47.826 0.00 0.00 0.00 4.34
3638 3861 4.457949 GCCCTCTTTCTGATTTCCGTTTTA 59.542 41.667 0.00 0.00 0.00 1.52
3675 3898 6.157820 CCTTCTCTCCTTCCCTTCTTAGATTT 59.842 42.308 0.00 0.00 0.00 2.17
3745 3978 3.785859 GGATCTGCACCTCCGCCA 61.786 66.667 0.00 0.00 0.00 5.69
3788 4021 2.041922 CCTGGATCCGTCCCTCCA 60.042 66.667 7.39 0.00 44.41 3.86
3795 4028 0.631753 TTCTCCTCTCCTGGATCCGT 59.368 55.000 7.39 0.00 35.30 4.69
3868 4101 2.122954 ACCCTTCCGCTCTCCCTT 59.877 61.111 0.00 0.00 0.00 3.95
3885 4118 4.843331 GCCCCTCCCCTGGATCCA 62.843 72.222 15.27 15.27 0.00 3.41
3918 4151 0.112995 AAGGAGCATTGCAACCCTCA 59.887 50.000 22.43 0.00 0.00 3.86
4104 4337 1.467734 GAGCGGTCGAGAAACTAGTCA 59.532 52.381 0.00 0.00 0.00 3.41
4465 4702 7.476667 CAACCTAATTTATGTGCGGTTAATCA 58.523 34.615 0.00 0.00 33.73 2.57
4580 4819 7.541091 CGTCCATTCATAAAGTAGTACGCATAT 59.459 37.037 0.00 0.00 0.00 1.78
4605 4844 6.092092 TGCATTCAATTTGTCAAATACTCCG 58.908 36.000 11.18 2.67 0.00 4.63
4812 5213 9.552114 GTGATATCAGCATATAAATTCAACAGC 57.448 33.333 5.42 0.00 0.00 4.40
4928 5329 3.573967 AGCGAGATTTTGGACAAAACCAT 59.426 39.130 11.94 2.26 42.32 3.55
4963 5364 7.833786 TGATAATACGACAAGTGTTAGGACTT 58.166 34.615 0.00 0.00 39.28 3.01
4964 5365 7.400599 TGATAATACGACAAGTGTTAGGACT 57.599 36.000 0.00 0.00 39.28 3.85
4965 5366 7.113124 CGATGATAATACGACAAGTGTTAGGAC 59.887 40.741 0.00 0.00 39.28 3.85
4966 5367 7.136772 CGATGATAATACGACAAGTGTTAGGA 58.863 38.462 0.00 0.00 39.28 2.94
4967 5368 6.916387 ACGATGATAATACGACAAGTGTTAGG 59.084 38.462 0.00 0.00 39.28 2.69
4968 5369 7.909777 ACGATGATAATACGACAAGTGTTAG 57.090 36.000 0.00 0.00 39.28 2.34
4998 5399 8.143835 GCATGCCTATCCAAAATACAAAACTAT 58.856 33.333 6.36 0.00 0.00 2.12
5001 5402 6.035975 GTGCATGCCTATCCAAAATACAAAAC 59.964 38.462 16.68 0.00 0.00 2.43
5002 5403 6.105333 GTGCATGCCTATCCAAAATACAAAA 58.895 36.000 16.68 0.00 0.00 2.44
5003 5404 5.186603 TGTGCATGCCTATCCAAAATACAAA 59.813 36.000 16.68 0.00 0.00 2.83
5505 6074 3.243737 ACGTCTGCTTGTGAGATGTTGTA 60.244 43.478 0.00 0.00 36.47 2.41
5637 6220 3.506067 ACAGTGTACCCTGCAAATAAAGC 59.494 43.478 5.15 0.00 35.83 3.51
6147 6748 9.990360 AGTTTGTTAAGGAAAAGAGAACAAAAA 57.010 25.926 11.54 0.00 46.05 1.94
6186 6787 6.197842 GCAGTATCAAAATGCACTCTTAATGC 59.802 38.462 0.00 0.00 43.68 3.56
6326 6932 7.334921 TCGAGGAGTTTGAAGTTTTAGTTTCAA 59.665 33.333 0.00 0.00 40.46 2.69
6358 6964 4.836125 TTTGAACATTGAACAGAGAGCC 57.164 40.909 0.00 0.00 0.00 4.70
6462 7068 4.885325 TCACCTCTACTTTCAAACCAAACC 59.115 41.667 0.00 0.00 0.00 3.27
6677 7284 7.893302 TGACCCCTGAAATGAAATGTACTAAAT 59.107 33.333 0.00 0.00 0.00 1.40
6824 7431 6.014840 TGGACACTAGAACCCTACTTAAGTTG 60.015 42.308 14.49 11.84 0.00 3.16
6878 7487 7.092354 ACTGGTAGGAGAGTATTCTGAGAGTTA 60.092 40.741 0.00 0.00 32.53 2.24
6918 7529 4.076394 GGCAACTTAGTCACCATTGGTAA 58.924 43.478 8.31 0.00 32.11 2.85
7333 7946 2.422479 GCAGATATATGCCATGTGCCAG 59.578 50.000 11.34 0.00 40.43 4.85
7396 8009 6.638468 GGAAATATAAAGCAAATTCGGCTGAG 59.362 38.462 5.44 0.00 41.66 3.35
7436 8049 1.134848 GCACACAAAAACAGGCAAGGA 60.135 47.619 0.00 0.00 0.00 3.36
7658 8276 1.098712 ACGGAGAAACAAAAGCCGCA 61.099 50.000 0.00 0.00 45.45 5.69
7660 8278 0.941542 TCACGGAGAAACAAAAGCCG 59.058 50.000 0.00 0.00 46.83 5.52
7680 8298 1.382522 TACGCTACTCAAGTACCCCG 58.617 55.000 0.00 0.00 0.00 5.73
7736 8359 1.192146 TCCTAAGCCAGCGACCAACT 61.192 55.000 0.00 0.00 0.00 3.16
7771 8394 8.265055 TCTTCTACCGATTCAAAATAGGACAAT 58.735 33.333 5.92 0.00 0.00 2.71
7863 8488 1.755380 AGTATTTCCGGACGAAGGGAG 59.245 52.381 1.83 0.00 33.01 4.30
7864 8489 1.856629 AGTATTTCCGGACGAAGGGA 58.143 50.000 1.83 0.00 0.00 4.20
7865 8490 2.277084 CAAGTATTTCCGGACGAAGGG 58.723 52.381 1.83 0.00 0.00 3.95
7866 8491 2.928116 GACAAGTATTTCCGGACGAAGG 59.072 50.000 1.83 0.00 0.00 3.46
7867 8492 3.581755 TGACAAGTATTTCCGGACGAAG 58.418 45.455 1.83 0.00 0.00 3.79
7868 8493 3.663995 TGACAAGTATTTCCGGACGAA 57.336 42.857 1.83 0.00 0.00 3.85
7869 8494 3.446161 AGATGACAAGTATTTCCGGACGA 59.554 43.478 1.83 0.00 0.00 4.20
7870 8495 3.782046 AGATGACAAGTATTTCCGGACG 58.218 45.455 1.83 0.00 0.00 4.79
7871 8496 6.145338 TCTAGATGACAAGTATTTCCGGAC 57.855 41.667 1.83 0.00 0.00 4.79
7872 8497 6.978674 ATCTAGATGACAAGTATTTCCGGA 57.021 37.500 3.89 0.00 0.00 5.14
7873 8498 7.658261 TGTATCTAGATGACAAGTATTTCCGG 58.342 38.462 15.79 0.00 0.00 5.14
7874 8499 9.347934 GATGTATCTAGATGACAAGTATTTCCG 57.652 37.037 15.79 0.00 0.00 4.30
7908 8533 9.357652 CCGAAAATACTTGTCATCAAAATGAAT 57.642 29.630 0.00 0.00 43.42 2.57
7909 8534 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
7910 8535 8.105097 TCCGAAAATACTTGTCATCAAAATGA 57.895 30.769 0.00 0.00 39.63 2.57
7911 8536 8.800972 CATCCGAAAATACTTGTCATCAAAATG 58.199 33.333 0.00 0.00 32.87 2.32
7912 8537 7.975616 CCATCCGAAAATACTTGTCATCAAAAT 59.024 33.333 0.00 0.00 32.87 1.82
7913 8538 7.175816 TCCATCCGAAAATACTTGTCATCAAAA 59.824 33.333 0.00 0.00 32.87 2.44
7914 8539 6.657117 TCCATCCGAAAATACTTGTCATCAAA 59.343 34.615 0.00 0.00 32.87 2.69
7915 8540 6.176896 TCCATCCGAAAATACTTGTCATCAA 58.823 36.000 0.00 0.00 0.00 2.57
7916 8541 5.739959 TCCATCCGAAAATACTTGTCATCA 58.260 37.500 0.00 0.00 0.00 3.07
7917 8542 5.237344 CCTCCATCCGAAAATACTTGTCATC 59.763 44.000 0.00 0.00 0.00 2.92
7918 8543 5.126067 CCTCCATCCGAAAATACTTGTCAT 58.874 41.667 0.00 0.00 0.00 3.06
7919 8544 4.513442 CCTCCATCCGAAAATACTTGTCA 58.487 43.478 0.00 0.00 0.00 3.58
7920 8545 3.877508 CCCTCCATCCGAAAATACTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
7921 8546 3.521937 TCCCTCCATCCGAAAATACTTGT 59.478 43.478 0.00 0.00 0.00 3.16
7922 8547 4.130118 CTCCCTCCATCCGAAAATACTTG 58.870 47.826 0.00 0.00 0.00 3.16
7923 8548 3.780850 ACTCCCTCCATCCGAAAATACTT 59.219 43.478 0.00 0.00 0.00 2.24
7924 8549 3.385115 ACTCCCTCCATCCGAAAATACT 58.615 45.455 0.00 0.00 0.00 2.12
7925 8550 3.840124 ACTCCCTCCATCCGAAAATAC 57.160 47.619 0.00 0.00 0.00 1.89
7926 8551 4.553678 ACTACTCCCTCCATCCGAAAATA 58.446 43.478 0.00 0.00 0.00 1.40
7927 8552 3.385115 ACTACTCCCTCCATCCGAAAAT 58.615 45.455 0.00 0.00 0.00 1.82
7928 8553 2.829023 ACTACTCCCTCCATCCGAAAA 58.171 47.619 0.00 0.00 0.00 2.29
7929 8554 2.544844 ACTACTCCCTCCATCCGAAA 57.455 50.000 0.00 0.00 0.00 3.46
7930 8555 2.158505 CCTACTACTCCCTCCATCCGAA 60.159 54.545 0.00 0.00 0.00 4.30
7931 8556 1.424302 CCTACTACTCCCTCCATCCGA 59.576 57.143 0.00 0.00 0.00 4.55
7932 8557 1.145325 ACCTACTACTCCCTCCATCCG 59.855 57.143 0.00 0.00 0.00 4.18
7933 8558 3.331718 AACCTACTACTCCCTCCATCC 57.668 52.381 0.00 0.00 0.00 3.51
7934 8559 6.316513 AGAATAACCTACTACTCCCTCCATC 58.683 44.000 0.00 0.00 0.00 3.51
7935 8560 6.125860 TGAGAATAACCTACTACTCCCTCCAT 60.126 42.308 0.00 0.00 0.00 3.41
7936 8561 5.195146 TGAGAATAACCTACTACTCCCTCCA 59.805 44.000 0.00 0.00 0.00 3.86
7937 8562 5.703310 TGAGAATAACCTACTACTCCCTCC 58.297 45.833 0.00 0.00 0.00 4.30
7938 8563 7.013559 GTCTTGAGAATAACCTACTACTCCCTC 59.986 44.444 0.00 0.00 0.00 4.30
7939 8564 6.834969 GTCTTGAGAATAACCTACTACTCCCT 59.165 42.308 0.00 0.00 0.00 4.20
7940 8565 6.606395 TGTCTTGAGAATAACCTACTACTCCC 59.394 42.308 0.00 0.00 0.00 4.30
7941 8566 7.339976 AGTGTCTTGAGAATAACCTACTACTCC 59.660 40.741 0.00 0.00 0.00 3.85
7942 8567 8.283699 AGTGTCTTGAGAATAACCTACTACTC 57.716 38.462 0.00 0.00 0.00 2.59
7943 8568 9.176460 GTAGTGTCTTGAGAATAACCTACTACT 57.824 37.037 0.00 0.00 35.90 2.57
7944 8569 8.404765 GGTAGTGTCTTGAGAATAACCTACTAC 58.595 40.741 0.00 0.00 37.25 2.73
7945 8570 8.334734 AGGTAGTGTCTTGAGAATAACCTACTA 58.665 37.037 0.00 0.00 0.00 1.82
7946 8571 7.183460 AGGTAGTGTCTTGAGAATAACCTACT 58.817 38.462 0.00 0.00 0.00 2.57
7947 8572 7.407393 AGGTAGTGTCTTGAGAATAACCTAC 57.593 40.000 0.00 0.00 0.00 3.18
7948 8573 8.431910 AAAGGTAGTGTCTTGAGAATAACCTA 57.568 34.615 0.00 0.00 0.00 3.08
7949 8574 6.936968 AAGGTAGTGTCTTGAGAATAACCT 57.063 37.500 0.00 0.00 0.00 3.50
7950 8575 7.660208 TCAAAAGGTAGTGTCTTGAGAATAACC 59.340 37.037 0.00 0.00 0.00 2.85
7951 8576 8.603242 TCAAAAGGTAGTGTCTTGAGAATAAC 57.397 34.615 0.00 0.00 0.00 1.89
7952 8577 9.793259 ATTCAAAAGGTAGTGTCTTGAGAATAA 57.207 29.630 0.00 0.00 32.17 1.40
7953 8578 9.219603 CATTCAAAAGGTAGTGTCTTGAGAATA 57.780 33.333 0.00 0.00 32.43 1.75
7954 8579 7.721399 ACATTCAAAAGGTAGTGTCTTGAGAAT 59.279 33.333 0.00 0.00 33.15 2.40
7955 8580 7.054124 ACATTCAAAAGGTAGTGTCTTGAGAA 58.946 34.615 0.00 0.00 0.00 2.87
7956 8581 6.591935 ACATTCAAAAGGTAGTGTCTTGAGA 58.408 36.000 0.00 0.00 0.00 3.27
7957 8582 6.867662 ACATTCAAAAGGTAGTGTCTTGAG 57.132 37.500 0.00 0.00 0.00 3.02
7958 8583 6.826231 TCAACATTCAAAAGGTAGTGTCTTGA 59.174 34.615 0.00 0.00 0.00 3.02
7959 8584 7.026631 TCAACATTCAAAAGGTAGTGTCTTG 57.973 36.000 0.00 0.00 0.00 3.02
7960 8585 7.639113 TTCAACATTCAAAAGGTAGTGTCTT 57.361 32.000 0.00 0.00 0.00 3.01
7961 8586 7.639113 TTTCAACATTCAAAAGGTAGTGTCT 57.361 32.000 0.00 0.00 0.00 3.41
7978 8603 9.905713 AAGCCTTGATTAGAGTATATTTCAACA 57.094 29.630 0.00 0.00 0.00 3.33
7980 8605 9.342308 CCAAGCCTTGATTAGAGTATATTTCAA 57.658 33.333 5.89 0.00 0.00 2.69
7981 8606 8.494433 ACCAAGCCTTGATTAGAGTATATTTCA 58.506 33.333 5.89 0.00 0.00 2.69
7982 8607 8.910351 ACCAAGCCTTGATTAGAGTATATTTC 57.090 34.615 5.89 0.00 0.00 2.17
7985 8610 9.950496 CATAACCAAGCCTTGATTAGAGTATAT 57.050 33.333 5.89 0.00 0.00 0.86
7986 8611 8.934697 ACATAACCAAGCCTTGATTAGAGTATA 58.065 33.333 5.89 0.00 0.00 1.47
7987 8612 7.806180 ACATAACCAAGCCTTGATTAGAGTAT 58.194 34.615 5.89 0.00 0.00 2.12
7988 8613 7.195374 ACATAACCAAGCCTTGATTAGAGTA 57.805 36.000 5.89 0.00 0.00 2.59
7989 8614 6.067217 ACATAACCAAGCCTTGATTAGAGT 57.933 37.500 5.89 0.00 0.00 3.24
7990 8615 7.396540 AAACATAACCAAGCCTTGATTAGAG 57.603 36.000 5.89 0.00 0.00 2.43
7991 8616 7.775053 AAAACATAACCAAGCCTTGATTAGA 57.225 32.000 5.89 0.00 0.00 2.10
8013 8638 2.826979 TGCGCGTCAACTTACAAAAA 57.173 40.000 8.43 0.00 0.00 1.94
8014 8639 2.539953 CCTTGCGCGTCAACTTACAAAA 60.540 45.455 8.43 0.00 0.00 2.44
8015 8640 1.003331 CCTTGCGCGTCAACTTACAAA 60.003 47.619 8.43 0.00 0.00 2.83
8016 8641 0.584396 CCTTGCGCGTCAACTTACAA 59.416 50.000 8.43 0.00 0.00 2.41
8017 8642 0.531090 ACCTTGCGCGTCAACTTACA 60.531 50.000 8.43 0.00 0.00 2.41
8018 8643 0.163146 GACCTTGCGCGTCAACTTAC 59.837 55.000 8.43 0.00 0.00 2.34
8019 8644 1.279527 CGACCTTGCGCGTCAACTTA 61.280 55.000 8.43 0.00 0.00 2.24
8020 8645 2.594962 CGACCTTGCGCGTCAACTT 61.595 57.895 8.43 0.00 0.00 2.66
8021 8646 3.036084 CGACCTTGCGCGTCAACT 61.036 61.111 8.43 0.00 0.00 3.16
8022 8647 3.335534 ACGACCTTGCGCGTCAAC 61.336 61.111 8.43 0.49 35.59 3.18
8023 8648 2.680693 TACACGACCTTGCGCGTCAA 62.681 55.000 8.43 11.80 38.92 3.18
8024 8649 3.196913 TACACGACCTTGCGCGTCA 62.197 57.895 8.43 3.08 38.92 4.35
8025 8650 2.429571 TACACGACCTTGCGCGTC 60.430 61.111 8.43 3.03 38.92 5.19
8026 8651 2.732094 GTACACGACCTTGCGCGT 60.732 61.111 8.43 0.00 42.11 6.01
8027 8652 3.475774 GGTACACGACCTTGCGCG 61.476 66.667 0.00 0.00 45.89 6.86
8037 8662 1.077501 TCCTCCTACCCGGTACACG 60.078 63.158 0.00 0.00 43.80 4.49
8038 8663 0.323725 TGTCCTCCTACCCGGTACAC 60.324 60.000 0.00 0.00 0.00 2.90
8039 8664 0.409092 TTGTCCTCCTACCCGGTACA 59.591 55.000 0.00 0.00 0.00 2.90
8040 8665 1.109609 CTTGTCCTCCTACCCGGTAC 58.890 60.000 0.00 0.00 0.00 3.34
8041 8666 0.032813 CCTTGTCCTCCTACCCGGTA 60.033 60.000 0.00 0.00 0.00 4.02
8042 8667 1.305887 CCTTGTCCTCCTACCCGGT 60.306 63.158 0.00 0.00 0.00 5.28
8043 8668 1.305887 ACCTTGTCCTCCTACCCGG 60.306 63.158 0.00 0.00 0.00 5.73
8044 8669 0.324460 AGACCTTGTCCTCCTACCCG 60.324 60.000 0.00 0.00 32.18 5.28
8045 8670 1.196012 CAGACCTTGTCCTCCTACCC 58.804 60.000 0.00 0.00 32.18 3.69
8046 8671 1.550976 CACAGACCTTGTCCTCCTACC 59.449 57.143 0.00 0.00 38.16 3.18
8047 8672 1.550976 CCACAGACCTTGTCCTCCTAC 59.449 57.143 0.00 0.00 38.16 3.18
8048 8673 1.149288 ACCACAGACCTTGTCCTCCTA 59.851 52.381 0.00 0.00 38.16 2.94
8049 8674 0.104934 ACCACAGACCTTGTCCTCCT 60.105 55.000 0.00 0.00 38.16 3.69
8050 8675 1.550976 CTACCACAGACCTTGTCCTCC 59.449 57.143 0.00 0.00 38.16 4.30
8051 8676 1.066787 GCTACCACAGACCTTGTCCTC 60.067 57.143 0.00 0.00 38.16 3.71
8052 8677 0.977395 GCTACCACAGACCTTGTCCT 59.023 55.000 0.00 0.00 38.16 3.85
8053 8678 0.977395 AGCTACCACAGACCTTGTCC 59.023 55.000 0.00 0.00 38.16 4.02
8054 8679 2.808543 CAAAGCTACCACAGACCTTGTC 59.191 50.000 0.00 0.00 38.16 3.18
8055 8680 2.438021 TCAAAGCTACCACAGACCTTGT 59.562 45.455 0.00 0.00 41.94 3.16
8056 8681 3.126001 TCAAAGCTACCACAGACCTTG 57.874 47.619 0.00 0.00 0.00 3.61
8057 8682 3.857157 TTCAAAGCTACCACAGACCTT 57.143 42.857 0.00 0.00 0.00 3.50
8058 8683 4.373156 AATTCAAAGCTACCACAGACCT 57.627 40.909 0.00 0.00 0.00 3.85
8059 8684 5.246307 AGTAATTCAAAGCTACCACAGACC 58.754 41.667 0.00 0.00 0.00 3.85
8060 8685 5.351740 GGAGTAATTCAAAGCTACCACAGAC 59.648 44.000 0.00 0.00 0.00 3.51
8061 8686 5.488341 GGAGTAATTCAAAGCTACCACAGA 58.512 41.667 0.00 0.00 0.00 3.41
8062 8687 4.636206 GGGAGTAATTCAAAGCTACCACAG 59.364 45.833 0.00 0.00 32.31 3.66
8063 8688 4.042311 TGGGAGTAATTCAAAGCTACCACA 59.958 41.667 0.00 0.00 37.06 4.17
8064 8689 4.585879 TGGGAGTAATTCAAAGCTACCAC 58.414 43.478 0.00 0.00 37.06 4.16
8065 8690 4.566907 GGTGGGAGTAATTCAAAGCTACCA 60.567 45.833 0.00 0.00 39.47 3.25
8066 8691 3.945921 GGTGGGAGTAATTCAAAGCTACC 59.054 47.826 0.00 0.00 32.65 3.18
8067 8692 3.621715 CGGTGGGAGTAATTCAAAGCTAC 59.378 47.826 0.00 0.00 0.00 3.58
8068 8693 3.262405 ACGGTGGGAGTAATTCAAAGCTA 59.738 43.478 0.00 0.00 0.00 3.32
8069 8694 2.039879 ACGGTGGGAGTAATTCAAAGCT 59.960 45.455 0.00 0.00 0.00 3.74
8070 8695 2.433436 ACGGTGGGAGTAATTCAAAGC 58.567 47.619 0.00 0.00 0.00 3.51
8071 8696 4.760204 AGAAACGGTGGGAGTAATTCAAAG 59.240 41.667 0.00 0.00 0.00 2.77
8072 8697 4.721132 AGAAACGGTGGGAGTAATTCAAA 58.279 39.130 0.00 0.00 0.00 2.69
8073 8698 4.360951 AGAAACGGTGGGAGTAATTCAA 57.639 40.909 0.00 0.00 0.00 2.69
8074 8699 5.486735 TTAGAAACGGTGGGAGTAATTCA 57.513 39.130 0.00 0.00 0.00 2.57
8075 8700 6.997239 ATTTAGAAACGGTGGGAGTAATTC 57.003 37.500 0.00 0.00 0.00 2.17
8076 8701 9.470399 AAATATTTAGAAACGGTGGGAGTAATT 57.530 29.630 0.00 0.00 0.00 1.40
8077 8702 8.899771 CAAATATTTAGAAACGGTGGGAGTAAT 58.100 33.333 0.00 0.00 0.00 1.89
8078 8703 7.884354 ACAAATATTTAGAAACGGTGGGAGTAA 59.116 33.333 0.00 0.00 0.00 2.24
8079 8704 7.396418 ACAAATATTTAGAAACGGTGGGAGTA 58.604 34.615 0.00 0.00 0.00 2.59
8080 8705 6.243148 ACAAATATTTAGAAACGGTGGGAGT 58.757 36.000 0.00 0.00 0.00 3.85
8081 8706 6.598064 AGACAAATATTTAGAAACGGTGGGAG 59.402 38.462 0.00 0.00 0.00 4.30
8082 8707 6.478129 AGACAAATATTTAGAAACGGTGGGA 58.522 36.000 0.00 0.00 0.00 4.37
8083 8708 6.753107 AGACAAATATTTAGAAACGGTGGG 57.247 37.500 0.00 0.00 0.00 4.61
8084 8709 9.471084 AAAAAGACAAATATTTAGAAACGGTGG 57.529 29.630 0.00 0.00 0.00 4.61
8126 8751 9.990868 TGTCTATATACATCCATATGTGGTAGT 57.009 33.333 8.51 10.44 45.99 2.73
8157 8782 8.677300 GGCAAAATGAATGAATCTACACTCTAA 58.323 33.333 0.00 0.00 0.00 2.10
8158 8783 7.283127 GGGCAAAATGAATGAATCTACACTCTA 59.717 37.037 0.00 0.00 0.00 2.43
8159 8784 6.096001 GGGCAAAATGAATGAATCTACACTCT 59.904 38.462 0.00 0.00 0.00 3.24
8160 8785 6.096001 AGGGCAAAATGAATGAATCTACACTC 59.904 38.462 0.00 0.00 0.00 3.51
8161 8786 5.954150 AGGGCAAAATGAATGAATCTACACT 59.046 36.000 0.00 0.00 0.00 3.55
8162 8787 6.096001 AGAGGGCAAAATGAATGAATCTACAC 59.904 38.462 0.00 0.00 0.00 2.90
8163 8788 6.189859 AGAGGGCAAAATGAATGAATCTACA 58.810 36.000 0.00 0.00 0.00 2.74
8164 8789 6.705863 AGAGGGCAAAATGAATGAATCTAC 57.294 37.500 0.00 0.00 0.00 2.59
8165 8790 7.396907 TCAAAGAGGGCAAAATGAATGAATCTA 59.603 33.333 0.00 0.00 0.00 1.98
8166 8791 6.211986 TCAAAGAGGGCAAAATGAATGAATCT 59.788 34.615 0.00 0.00 0.00 2.40
8167 8792 6.400568 TCAAAGAGGGCAAAATGAATGAATC 58.599 36.000 0.00 0.00 0.00 2.52
8168 8793 6.363167 TCAAAGAGGGCAAAATGAATGAAT 57.637 33.333 0.00 0.00 0.00 2.57
8169 8794 5.804944 TCAAAGAGGGCAAAATGAATGAA 57.195 34.783 0.00 0.00 0.00 2.57
8170 8795 5.804944 TTCAAAGAGGGCAAAATGAATGA 57.195 34.783 0.00 0.00 0.00 2.57
8171 8796 7.820872 AGTAATTCAAAGAGGGCAAAATGAATG 59.179 33.333 0.00 0.00 37.52 2.67
8172 8797 7.910584 AGTAATTCAAAGAGGGCAAAATGAAT 58.089 30.769 0.00 0.00 38.70 2.57
8173 8798 7.233348 AGAGTAATTCAAAGAGGGCAAAATGAA 59.767 33.333 0.00 0.00 0.00 2.57
8174 8799 6.721208 AGAGTAATTCAAAGAGGGCAAAATGA 59.279 34.615 0.00 0.00 0.00 2.57
8175 8800 6.928520 AGAGTAATTCAAAGAGGGCAAAATG 58.071 36.000 0.00 0.00 0.00 2.32
8176 8801 6.950619 AGAGAGTAATTCAAAGAGGGCAAAAT 59.049 34.615 0.00 0.00 0.00 1.82
8177 8802 6.306987 AGAGAGTAATTCAAAGAGGGCAAAA 58.693 36.000 0.00 0.00 0.00 2.44
8178 8803 5.880901 AGAGAGTAATTCAAAGAGGGCAAA 58.119 37.500 0.00 0.00 0.00 3.68
8179 8804 5.491982 GAGAGAGTAATTCAAAGAGGGCAA 58.508 41.667 0.00 0.00 0.00 4.52
8180 8805 4.080863 GGAGAGAGTAATTCAAAGAGGGCA 60.081 45.833 0.00 0.00 0.00 5.36
8181 8806 4.447290 GGAGAGAGTAATTCAAAGAGGGC 58.553 47.826 0.00 0.00 0.00 5.19
8182 8807 4.160626 ACGGAGAGAGTAATTCAAAGAGGG 59.839 45.833 0.00 0.00 0.00 4.30
8183 8808 5.331876 ACGGAGAGAGTAATTCAAAGAGG 57.668 43.478 0.00 0.00 0.00 3.69
8184 8809 7.659652 AAAACGGAGAGAGTAATTCAAAGAG 57.340 36.000 0.00 0.00 0.00 2.85
8185 8810 9.550406 TTAAAAACGGAGAGAGTAATTCAAAGA 57.450 29.630 0.00 0.00 0.00 2.52
8195 8820 9.503399 AGACAAATATTTAAAAACGGAGAGAGT 57.497 29.630 0.00 0.00 0.00 3.24
8241 8866 9.990868 TGTCTATATACATCCATATGTGGTAGT 57.009 33.333 8.51 10.44 45.99 2.73
8272 8897 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
8273 8898 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
8274 8899 7.828223 AGAGCAAAATGAATGAATCTACACTCT 59.172 33.333 0.00 0.00 0.00 3.24
8275 8900 7.909121 CAGAGCAAAATGAATGAATCTACACTC 59.091 37.037 0.00 0.00 0.00 3.51
8276 8901 7.392673 ACAGAGCAAAATGAATGAATCTACACT 59.607 33.333 0.00 0.00 0.00 3.55
8277 8902 7.533426 ACAGAGCAAAATGAATGAATCTACAC 58.467 34.615 0.00 0.00 0.00 2.90
8278 8903 7.692460 ACAGAGCAAAATGAATGAATCTACA 57.308 32.000 0.00 0.00 0.00 2.74
8279 8904 9.661187 CATACAGAGCAAAATGAATGAATCTAC 57.339 33.333 0.00 0.00 0.00 2.59
8280 8905 9.399797 ACATACAGAGCAAAATGAATGAATCTA 57.600 29.630 0.00 0.00 0.00 1.98
8281 8906 8.289939 ACATACAGAGCAAAATGAATGAATCT 57.710 30.769 0.00 0.00 0.00 2.40
8282 8907 9.661187 CTACATACAGAGCAAAATGAATGAATC 57.339 33.333 0.00 0.00 0.00 2.52
8283 8908 9.182214 ACTACATACAGAGCAAAATGAATGAAT 57.818 29.630 0.00 0.00 0.00 2.57
8284 8909 8.565896 ACTACATACAGAGCAAAATGAATGAA 57.434 30.769 0.00 0.00 0.00 2.57
8285 8910 7.823799 TGACTACATACAGAGCAAAATGAATGA 59.176 33.333 0.00 0.00 0.00 2.57
8286 8911 7.907045 GTGACTACATACAGAGCAAAATGAATG 59.093 37.037 0.00 0.00 0.00 2.67
8287 8912 7.826252 AGTGACTACATACAGAGCAAAATGAAT 59.174 33.333 0.00 0.00 0.00 2.57
8288 8913 7.161404 AGTGACTACATACAGAGCAAAATGAA 58.839 34.615 0.00 0.00 0.00 2.57
8289 8914 6.701340 AGTGACTACATACAGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
8290 8915 6.974932 AGTGACTACATACAGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
8291 8916 6.936900 ACAAGTGACTACATACAGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
8292 8917 6.288294 ACAAGTGACTACATACAGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
8293 8918 5.853936 ACAAGTGACTACATACAGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
8294 8919 5.468540 ACAAGTGACTACATACAGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
8295 8920 5.010617 TCAACAAGTGACTACATACAGAGCA 59.989 40.000 0.00 0.00 0.00 4.26
8296 8921 5.470368 TCAACAAGTGACTACATACAGAGC 58.530 41.667 0.00 0.00 0.00 4.09
8297 8922 7.946655 TTTCAACAAGTGACTACATACAGAG 57.053 36.000 0.00 0.00 35.39 3.35
8298 8923 8.367911 AGATTTCAACAAGTGACTACATACAGA 58.632 33.333 0.00 0.00 35.39 3.41
8299 8924 8.539770 AGATTTCAACAAGTGACTACATACAG 57.460 34.615 0.00 0.00 35.39 2.74
8300 8925 8.902540 AAGATTTCAACAAGTGACTACATACA 57.097 30.769 0.00 0.00 35.39 2.29
8309 8934 9.581099 GGTCTTTTTAAAGATTTCAACAAGTGA 57.419 29.630 8.07 0.00 45.83 3.41
8310 8935 9.364989 TGGTCTTTTTAAAGATTTCAACAAGTG 57.635 29.630 8.07 0.00 45.83 3.16
8311 8936 9.936759 TTGGTCTTTTTAAAGATTTCAACAAGT 57.063 25.926 8.07 0.00 45.83 3.16
8327 8952 8.520351 CCTCCGTTTCTAAATATTGGTCTTTTT 58.480 33.333 0.00 0.00 0.00 1.94
8328 8953 7.122204 CCCTCCGTTTCTAAATATTGGTCTTTT 59.878 37.037 0.00 0.00 0.00 2.27
8329 8954 6.602009 CCCTCCGTTTCTAAATATTGGTCTTT 59.398 38.462 0.00 0.00 0.00 2.52
8330 8955 6.069847 TCCCTCCGTTTCTAAATATTGGTCTT 60.070 38.462 0.00 0.00 0.00 3.01
8331 8956 5.427481 TCCCTCCGTTTCTAAATATTGGTCT 59.573 40.000 0.00 0.00 0.00 3.85
8332 8957 5.677567 TCCCTCCGTTTCTAAATATTGGTC 58.322 41.667 0.00 0.00 0.00 4.02
8333 8958 5.191124 ACTCCCTCCGTTTCTAAATATTGGT 59.809 40.000 0.00 0.00 0.00 3.67
8334 8959 5.681639 ACTCCCTCCGTTTCTAAATATTGG 58.318 41.667 0.00 0.00 0.00 3.16
8335 8960 7.270047 TGTACTCCCTCCGTTTCTAAATATTG 58.730 38.462 0.00 0.00 0.00 1.90
8336 8961 7.427989 TGTACTCCCTCCGTTTCTAAATATT 57.572 36.000 0.00 0.00 0.00 1.28
8337 8962 7.427989 TTGTACTCCCTCCGTTTCTAAATAT 57.572 36.000 0.00 0.00 0.00 1.28
8338 8963 6.855763 TTGTACTCCCTCCGTTTCTAAATA 57.144 37.500 0.00 0.00 0.00 1.40
8339 8964 5.750352 TTGTACTCCCTCCGTTTCTAAAT 57.250 39.130 0.00 0.00 0.00 1.40
8340 8965 5.750352 ATTGTACTCCCTCCGTTTCTAAA 57.250 39.130 0.00 0.00 0.00 1.85
8341 8966 5.750352 AATTGTACTCCCTCCGTTTCTAA 57.250 39.130 0.00 0.00 0.00 2.10
8342 8967 5.012354 ACAAATTGTACTCCCTCCGTTTCTA 59.988 40.000 0.00 0.00 0.00 2.10
8343 8968 4.202430 ACAAATTGTACTCCCTCCGTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
8344 8969 4.070009 ACAAATTGTACTCCCTCCGTTTC 58.930 43.478 0.00 0.00 0.00 2.78
8345 8970 4.094830 ACAAATTGTACTCCCTCCGTTT 57.905 40.909 0.00 0.00 0.00 3.60
8346 8971 3.782656 ACAAATTGTACTCCCTCCGTT 57.217 42.857 0.00 0.00 0.00 4.44
8347 8972 3.071892 TGAACAAATTGTACTCCCTCCGT 59.928 43.478 0.00 0.00 0.00 4.69
8348 8973 3.435671 GTGAACAAATTGTACTCCCTCCG 59.564 47.826 0.00 0.00 0.00 4.63
8349 8974 3.756963 GGTGAACAAATTGTACTCCCTCC 59.243 47.826 0.00 0.00 0.00 4.30
8350 8975 3.756963 GGGTGAACAAATTGTACTCCCTC 59.243 47.826 18.30 5.94 33.64 4.30
8351 8976 3.397955 AGGGTGAACAAATTGTACTCCCT 59.602 43.478 20.80 20.80 38.20 4.20
8352 8977 3.756963 GAGGGTGAACAAATTGTACTCCC 59.243 47.826 18.07 18.07 35.30 4.30
8353 8978 4.652822 AGAGGGTGAACAAATTGTACTCC 58.347 43.478 0.00 2.22 0.00 3.85
8354 8979 5.048713 CCAAGAGGGTGAACAAATTGTACTC 60.049 44.000 0.00 0.00 0.00 2.59
8355 8980 4.827284 CCAAGAGGGTGAACAAATTGTACT 59.173 41.667 0.00 0.00 0.00 2.73
8356 8981 5.121221 CCAAGAGGGTGAACAAATTGTAC 57.879 43.478 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.