Multiple sequence alignment - TraesCS3B01G221700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G221700 chr3B 100.000 5035 0 0 1 5035 276848133 276853167 0.000000e+00 9299.0
1 TraesCS3B01G221700 chr3B 88.587 184 16 5 304 486 628879460 628879281 8.490000e-53 219.0
2 TraesCS3B01G221700 chr3B 93.182 132 9 0 1061 1192 237648051 237647920 1.430000e-45 195.0
3 TraesCS3B01G221700 chr3B 90.714 140 13 0 1270 1409 237647787 237647648 2.390000e-43 187.0
4 TraesCS3B01G221700 chr3D 94.167 4046 141 34 483 4468 193598667 193594657 0.000000e+00 6076.0
5 TraesCS3B01G221700 chr3D 88.571 210 20 3 116 323 193598871 193598664 8.370000e-63 252.0
6 TraesCS3B01G221700 chr3D 93.182 132 9 0 1061 1192 160912165 160912034 1.430000e-45 195.0
7 TraesCS3B01G221700 chr3D 87.151 179 9 2 4464 4642 193565634 193565470 1.850000e-44 191.0
8 TraesCS3B01G221700 chr3D 90.714 140 13 0 1270 1409 160911901 160911762 2.390000e-43 187.0
9 TraesCS3B01G221700 chr3D 93.333 120 4 4 1 118 193599017 193598900 1.860000e-39 174.0
10 TraesCS3B01G221700 chr3D 77.130 223 32 10 9 221 193599129 193598916 1.480000e-20 111.0
11 TraesCS3B01G221700 chr3A 93.703 2128 72 27 483 2594 266450623 266452704 0.000000e+00 3131.0
12 TraesCS3B01G221700 chr3A 95.762 1227 42 8 3214 4436 266453558 266454778 0.000000e+00 1969.0
13 TraesCS3B01G221700 chr3A 93.293 656 17 2 2581 3215 266452805 266453454 0.000000e+00 942.0
14 TraesCS3B01G221700 chr3A 94.022 184 9 2 4460 4642 266455153 266455335 1.380000e-70 278.0
15 TraesCS3B01G221700 chr3A 88.835 206 16 5 1 203 266444089 266444290 3.890000e-61 246.0
16 TraesCS3B01G221700 chr3A 93.182 132 9 0 1061 1192 189276073 189276204 1.430000e-45 195.0
17 TraesCS3B01G221700 chr3A 91.429 140 12 0 1270 1409 189276337 189276476 5.140000e-45 193.0
18 TraesCS3B01G221700 chr3A 89.764 127 13 0 197 323 266450497 266450623 4.030000e-36 163.0
19 TraesCS3B01G221700 chr3A 80.357 168 17 9 9 169 266443978 266444136 4.120000e-21 113.0
20 TraesCS3B01G221700 chr4B 91.414 396 29 3 4644 5035 12254248 12254642 5.740000e-149 538.0
21 TraesCS3B01G221700 chr4B 90.439 387 36 1 4642 5027 362740590 362740976 4.500000e-140 508.0
22 TraesCS3B01G221700 chr4B 89.286 392 35 6 4641 5027 114953016 114953405 7.580000e-133 484.0
23 TraesCS3B01G221700 chr4B 90.217 184 13 5 304 486 172884724 172884545 8.430000e-58 235.0
24 TraesCS3B01G221700 chr5B 90.418 407 28 4 4638 5035 78440912 78441316 4.470000e-145 525.0
25 TraesCS3B01G221700 chr5B 89.169 397 38 3 4643 5035 234173345 234172950 1.630000e-134 490.0
26 TraesCS3B01G221700 chr5B 93.233 133 7 2 1061 1192 125228504 125228635 1.430000e-45 195.0
27 TraesCS3B01G221700 chr2D 89.175 388 37 5 4642 5027 543457804 543458188 3.530000e-131 479.0
28 TraesCS3B01G221700 chr2D 88.308 402 36 7 4644 5035 324863267 324863667 5.900000e-129 472.0
29 TraesCS3B01G221700 chr2D 90.000 180 16 2 316 495 115400905 115400728 1.090000e-56 231.0
30 TraesCS3B01G221700 chr6B 88.101 395 43 2 4645 5035 105961417 105961811 2.750000e-127 466.0
31 TraesCS3B01G221700 chr6B 93.373 166 9 1 328 491 12739995 12739830 1.400000e-60 244.0
32 TraesCS3B01G221700 chr6B 92.353 170 12 1 321 489 545182747 545182578 1.810000e-59 241.0
33 TraesCS3B01G221700 chr6B 95.652 46 2 0 1713 1758 63517210 63517255 1.940000e-09 75.0
34 TraesCS3B01G221700 chr5D 87.940 398 41 4 4643 5035 438192515 438192910 3.550000e-126 462.0
35 TraesCS3B01G221700 chr5D 96.104 154 6 0 333 486 449670427 449670274 8.370000e-63 252.0
36 TraesCS3B01G221700 chr5D 93.373 166 10 1 327 491 321902073 321901908 1.400000e-60 244.0
37 TraesCS3B01G221700 chr5D 93.750 160 9 1 327 486 206590217 206590059 6.510000e-59 239.0
38 TraesCS3B01G221700 chr5D 90.960 177 12 3 310 486 455740473 455740301 8.430000e-58 235.0
39 TraesCS3B01G221700 chr5D 93.985 133 6 2 1061 1192 114349335 114349466 3.070000e-47 200.0
40 TraesCS3B01G221700 chr4D 93.333 165 11 0 322 486 416867840 416867676 1.400000e-60 244.0
41 TraesCS3B01G221700 chr2B 90.230 174 13 4 315 486 90002240 90002069 1.820000e-54 224.0
42 TraesCS3B01G221700 chr2B 91.875 160 13 0 327 486 93694740 93694581 1.820000e-54 224.0
43 TraesCS3B01G221700 chr2B 90.476 168 16 0 328 495 39787879 39787712 6.560000e-54 222.0
44 TraesCS3B01G221700 chr2B 89.326 178 17 2 310 486 160899555 160899731 6.560000e-54 222.0
45 TraesCS3B01G221700 chr2B 92.453 53 3 1 1706 1758 28009924 28009975 1.940000e-09 75.0
46 TraesCS3B01G221700 chr2B 94.000 50 2 1 1709 1758 28085382 28085334 1.940000e-09 75.0
47 TraesCS3B01G221700 chr2B 95.652 46 2 0 1713 1758 759350607 759350562 1.940000e-09 75.0
48 TraesCS3B01G221700 chr2A 89.266 177 15 3 310 486 180709250 180709078 8.490000e-53 219.0
49 TraesCS3B01G221700 chr5A 93.284 134 7 2 1061 1193 119439117 119439249 3.980000e-46 196.0
50 TraesCS3B01G221700 chr5A 78.102 137 15 7 19 141 364971904 364971769 6.990000e-09 73.1
51 TraesCS3B01G221700 chr7D 91.228 57 3 2 1702 1758 622995967 622996021 5.410000e-10 76.8
52 TraesCS3B01G221700 chr7D 95.556 45 1 1 1708 1752 436463825 436463868 2.510000e-08 71.3
53 TraesCS3B01G221700 chr7D 100.000 35 0 0 107 141 224481894 224481860 1.170000e-06 65.8
54 TraesCS3B01G221700 chr6D 94.000 50 2 1 1709 1758 108777441 108777393 1.940000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G221700 chr3B 276848133 276853167 5034 False 9299.00 9299 100.00000 1 5035 1 chr3B.!!$F1 5034
1 TraesCS3B01G221700 chr3D 193594657 193599129 4472 True 1653.25 6076 88.30025 1 4468 4 chr3D.!!$R3 4467
2 TraesCS3B01G221700 chr3A 266450497 266455335 4838 False 1296.60 3131 93.30880 197 4642 5 chr3A.!!$F3 4445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
266 412 0.026803 GCTGCGGAAATAAGCTGTCG 59.973 55.0 0.00 0.00 35.24 4.35 F
827 974 0.322456 CCCCTTGAATTCTCACGCCA 60.322 55.0 7.05 0.00 0.00 5.69 F
1764 1947 0.107508 ATCCTGTCCGTTGCATCTGG 60.108 55.0 0.00 0.00 0.00 3.86 F
2225 2418 0.170561 GAGAGTAAGAGTCGCCGCAA 59.829 55.0 0.00 0.00 0.00 4.85 F
3459 3892 0.035725 TTCCATCTGCTGCTCTGTGG 60.036 55.0 0.00 4.52 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1242 1391 1.295792 GAAACACACAGAAGCACGGA 58.704 50.000 0.00 0.0 0.00 4.69 R
2796 3103 0.179078 CCAGGCTCAGATGCTCTCAC 60.179 60.000 0.00 0.0 0.00 3.51 R
2925 3232 3.085533 AGTAGCAGAAGTGTCGTGAGAT 58.914 45.455 0.00 0.0 45.19 2.75 R
3990 4427 1.476085 CATGGCGCCCAATGTTAAGAA 59.524 47.619 26.77 0.0 36.95 2.52 R
4840 5634 0.033109 AATGGGGTTAGAAGGCAGGC 60.033 55.000 0.00 0.0 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 205 4.053295 GACTTGCATGCATGACTTGTTTT 58.947 39.130 33.07 13.33 0.00 2.43
91 206 4.444536 ACTTGCATGCATGACTTGTTTTT 58.555 34.783 33.07 10.41 0.00 1.94
101 216 4.305989 TGACTTGTTTTTCTGACATGGC 57.694 40.909 0.00 0.00 32.45 4.40
104 219 5.239306 TGACTTGTTTTTCTGACATGGCTAG 59.761 40.000 0.00 0.00 32.89 3.42
164 308 1.195448 GTGCTACCGATGCATGCATAC 59.805 52.381 32.27 20.55 42.69 2.39
171 315 3.499537 ACCGATGCATGCATACAATAGTG 59.500 43.478 32.27 15.95 36.70 2.74
173 317 4.393990 CCGATGCATGCATACAATAGTGAT 59.606 41.667 32.27 7.50 36.70 3.06
174 318 5.106436 CCGATGCATGCATACAATAGTGATT 60.106 40.000 32.27 7.27 36.70 2.57
175 319 6.376177 CGATGCATGCATACAATAGTGATTT 58.624 36.000 32.27 6.78 36.70 2.17
176 320 6.859508 CGATGCATGCATACAATAGTGATTTT 59.140 34.615 32.27 6.05 36.70 1.82
177 321 7.380333 CGATGCATGCATACAATAGTGATTTTT 59.620 33.333 32.27 5.62 36.70 1.94
226 372 3.070476 TGCTTATGTGACATGAGCCAA 57.930 42.857 31.03 16.53 32.53 4.52
235 381 4.341806 TGTGACATGAGCCAATTCTTTTGT 59.658 37.500 0.00 0.00 0.00 2.83
236 382 5.534278 TGTGACATGAGCCAATTCTTTTGTA 59.466 36.000 0.00 0.00 0.00 2.41
248 394 9.237846 GCCAATTCTTTTGTACTTATATTCAGC 57.762 33.333 0.00 0.00 0.00 4.26
261 407 4.756084 ATATTCAGCTGCGGAAATAAGC 57.244 40.909 18.52 0.00 37.20 3.09
266 412 0.026803 GCTGCGGAAATAAGCTGTCG 59.973 55.000 0.00 0.00 35.24 4.35
330 476 9.794719 AGGCTTTTTATAAATAGTACCATCTCC 57.205 33.333 14.62 6.92 0.00 3.71
331 477 8.718734 GGCTTTTTATAAATAGTACCATCTCCG 58.281 37.037 14.62 0.00 0.00 4.63
332 478 9.269453 GCTTTTTATAAATAGTACCATCTCCGT 57.731 33.333 14.62 0.00 0.00 4.69
345 491 9.326413 AGTACCATCTCCGTTCTTAAATATTTG 57.674 33.333 11.05 0.00 0.00 2.32
346 492 9.106070 GTACCATCTCCGTTCTTAAATATTTGT 57.894 33.333 11.05 0.00 0.00 2.83
347 493 8.209917 ACCATCTCCGTTCTTAAATATTTGTC 57.790 34.615 11.05 0.00 0.00 3.18
348 494 8.047310 ACCATCTCCGTTCTTAAATATTTGTCT 58.953 33.333 11.05 0.00 0.00 3.41
349 495 8.893727 CCATCTCCGTTCTTAAATATTTGTCTT 58.106 33.333 11.05 0.00 0.00 3.01
368 514 9.651913 TTTGTCTTTTTAAAGATTTCAGCAAGT 57.348 25.926 8.07 0.00 45.83 3.16
369 515 8.633075 TGTCTTTTTAAAGATTTCAGCAAGTG 57.367 30.769 8.07 0.00 45.83 3.16
370 516 8.465999 TGTCTTTTTAAAGATTTCAGCAAGTGA 58.534 29.630 8.07 0.00 45.83 3.41
371 517 8.746751 GTCTTTTTAAAGATTTCAGCAAGTGAC 58.253 33.333 8.07 0.00 45.83 3.67
372 518 8.686334 TCTTTTTAAAGATTTCAGCAAGTGACT 58.314 29.630 0.89 0.00 39.95 3.41
373 519 9.950680 CTTTTTAAAGATTTCAGCAAGTGACTA 57.049 29.630 0.00 0.00 38.28 2.59
374 520 9.730420 TTTTTAAAGATTTCAGCAAGTGACTAC 57.270 29.630 0.00 0.00 33.71 2.73
375 521 8.445275 TTTAAAGATTTCAGCAAGTGACTACA 57.555 30.769 0.00 0.00 33.71 2.74
376 522 8.621532 TTAAAGATTTCAGCAAGTGACTACAT 57.378 30.769 0.00 0.00 33.71 2.29
377 523 9.719355 TTAAAGATTTCAGCAAGTGACTACATA 57.281 29.630 0.00 0.00 33.71 2.29
378 524 7.602517 AAGATTTCAGCAAGTGACTACATAC 57.397 36.000 0.00 0.00 33.71 2.39
379 525 5.807520 AGATTTCAGCAAGTGACTACATACG 59.192 40.000 0.00 0.00 33.71 3.06
380 526 4.776795 TTCAGCAAGTGACTACATACGA 57.223 40.909 0.00 0.00 33.71 3.43
381 527 4.776795 TCAGCAAGTGACTACATACGAA 57.223 40.909 0.00 0.00 0.00 3.85
382 528 4.733850 TCAGCAAGTGACTACATACGAAG 58.266 43.478 0.00 0.00 0.00 3.79
383 529 3.304559 CAGCAAGTGACTACATACGAAGC 59.695 47.826 0.00 0.00 0.00 3.86
384 530 3.056821 AGCAAGTGACTACATACGAAGCA 60.057 43.478 0.00 0.00 0.00 3.91
385 531 3.678072 GCAAGTGACTACATACGAAGCAA 59.322 43.478 0.00 0.00 0.00 3.91
386 532 4.151689 GCAAGTGACTACATACGAAGCAAA 59.848 41.667 0.00 0.00 0.00 3.68
387 533 5.333798 GCAAGTGACTACATACGAAGCAAAA 60.334 40.000 0.00 0.00 0.00 2.44
388 534 6.620733 GCAAGTGACTACATACGAAGCAAAAT 60.621 38.462 0.00 0.00 0.00 1.82
389 535 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
390 536 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
391 537 6.649141 AGTGACTACATACGAAGCAAAATGAA 59.351 34.615 0.00 0.00 0.00 2.57
392 538 7.334421 AGTGACTACATACGAAGCAAAATGAAT 59.666 33.333 0.00 0.00 0.00 2.57
393 539 7.426456 GTGACTACATACGAAGCAAAATGAATG 59.574 37.037 0.00 0.00 0.00 2.67
394 540 7.333174 TGACTACATACGAAGCAAAATGAATGA 59.667 33.333 0.00 0.00 0.00 2.57
395 541 8.039603 ACTACATACGAAGCAAAATGAATGAA 57.960 30.769 0.00 0.00 0.00 2.57
396 542 8.677300 ACTACATACGAAGCAAAATGAATGAAT 58.323 29.630 0.00 0.00 0.00 2.57
397 543 7.975866 ACATACGAAGCAAAATGAATGAATC 57.024 32.000 0.00 0.00 0.00 2.52
398 544 7.765307 ACATACGAAGCAAAATGAATGAATCT 58.235 30.769 0.00 0.00 0.00 2.40
399 545 8.892723 ACATACGAAGCAAAATGAATGAATCTA 58.107 29.630 0.00 0.00 0.00 1.98
400 546 9.162793 CATACGAAGCAAAATGAATGAATCTAC 57.837 33.333 0.00 0.00 0.00 2.59
401 547 7.144722 ACGAAGCAAAATGAATGAATCTACA 57.855 32.000 0.00 0.00 0.00 2.74
402 548 7.023575 ACGAAGCAAAATGAATGAATCTACAC 58.976 34.615 0.00 0.00 0.00 2.90
403 549 7.094634 ACGAAGCAAAATGAATGAATCTACACT 60.095 33.333 0.00 0.00 0.00 3.55
404 550 7.752239 CGAAGCAAAATGAATGAATCTACACTT 59.248 33.333 0.00 0.00 0.00 3.16
405 551 9.415544 GAAGCAAAATGAATGAATCTACACTTT 57.584 29.630 0.00 0.00 0.00 2.66
481 627 9.908152 AAAAGACAAATATTTAGAAACGAAGGG 57.092 29.630 0.00 0.00 0.00 3.95
482 628 8.857694 AAGACAAATATTTAGAAACGAAGGGA 57.142 30.769 0.00 0.00 0.00 4.20
519 665 9.268282 AGATTAGACTTGTAGAATAAGTTGGGA 57.732 33.333 0.00 0.00 38.42 4.37
539 685 3.119137 GGAAGGCGCCAACTTATTTTCAT 60.119 43.478 31.54 0.00 0.00 2.57
621 767 9.843334 AGTAGCTTATATAAAATCTAGACACGC 57.157 33.333 0.00 0.00 0.00 5.34
622 768 7.798486 AGCTTATATAAAATCTAGACACGCG 57.202 36.000 3.53 3.53 0.00 6.01
623 769 6.308282 AGCTTATATAAAATCTAGACACGCGC 59.692 38.462 5.73 0.00 0.00 6.86
624 770 6.089016 GCTTATATAAAATCTAGACACGCGCA 59.911 38.462 5.73 0.00 0.00 6.09
625 771 7.358931 GCTTATATAAAATCTAGACACGCGCAA 60.359 37.037 5.73 0.00 0.00 4.85
626 772 6.838198 ATATAAAATCTAGACACGCGCAAA 57.162 33.333 5.73 0.00 0.00 3.68
627 773 3.889196 AAAATCTAGACACGCGCAAAA 57.111 38.095 5.73 0.00 0.00 2.44
628 774 3.889196 AAATCTAGACACGCGCAAAAA 57.111 38.095 5.73 0.00 0.00 1.94
827 974 0.322456 CCCCTTGAATTCTCACGCCA 60.322 55.000 7.05 0.00 0.00 5.69
894 1041 4.205287 GCAGGCAGCAAGAGAGAG 57.795 61.111 0.00 0.00 44.79 3.20
895 1042 1.595882 GCAGGCAGCAAGAGAGAGA 59.404 57.895 0.00 0.00 44.79 3.10
896 1043 0.460635 GCAGGCAGCAAGAGAGAGAG 60.461 60.000 0.00 0.00 44.79 3.20
964 1113 2.693864 CCCACCAGCCCCAGATCT 60.694 66.667 0.00 0.00 0.00 2.75
1046 1195 1.668101 GGGGTGTGCGAGTAGGAGAG 61.668 65.000 0.00 0.00 0.00 3.20
1059 1208 0.762461 AGGAGAGGGCCAGCAGATAC 60.762 60.000 6.18 0.00 0.00 2.24
1075 1224 3.070159 CAGATACGATGTTCCTGTGGGAT 59.930 47.826 0.00 0.00 41.87 3.85
1425 1574 5.251601 AGGTTAGCGTCAATCTCTTCTAC 57.748 43.478 0.00 0.00 0.00 2.59
1447 1596 6.783708 ACTATATCTGTATTAGGCTGCCTC 57.216 41.667 27.16 11.55 34.61 4.70
1511 1660 3.003793 TCTCGTCATTTCTATCCTCTGCG 59.996 47.826 0.00 0.00 0.00 5.18
1549 1698 8.597662 AAAGAGCGACTGTTGTTACTTTAATA 57.402 30.769 11.43 0.00 0.00 0.98
1589 1768 1.879380 TCAAGGAACACTGAATTGCCG 59.121 47.619 0.00 0.00 0.00 5.69
1590 1769 1.879380 CAAGGAACACTGAATTGCCGA 59.121 47.619 0.00 0.00 0.00 5.54
1591 1770 2.270352 AGGAACACTGAATTGCCGAA 57.730 45.000 0.00 0.00 0.00 4.30
1592 1771 2.795329 AGGAACACTGAATTGCCGAAT 58.205 42.857 0.00 0.00 0.00 3.34
1593 1772 3.157087 AGGAACACTGAATTGCCGAATT 58.843 40.909 0.00 0.00 34.29 2.17
1594 1773 3.057315 AGGAACACTGAATTGCCGAATTG 60.057 43.478 0.00 0.00 31.58 2.32
1595 1774 3.244976 GAACACTGAATTGCCGAATTGG 58.755 45.455 0.00 0.00 42.50 3.16
1618 1797 5.965922 GCAATTGCCAACCTTTCTAAGTAT 58.034 37.500 20.06 0.00 34.31 2.12
1764 1947 0.107508 ATCCTGTCCGTTGCATCTGG 60.108 55.000 0.00 0.00 0.00 3.86
1767 1950 1.338674 CCTGTCCGTTGCATCTGGTAA 60.339 52.381 0.00 0.00 0.00 2.85
1768 1951 2.422597 CTGTCCGTTGCATCTGGTAAA 58.577 47.619 0.00 0.00 0.00 2.01
1769 1952 3.009723 CTGTCCGTTGCATCTGGTAAAT 58.990 45.455 0.00 0.00 0.00 1.40
1838 2031 2.493035 CTGTGTGAACAGGTGCATACA 58.507 47.619 9.30 9.30 35.36 2.29
1850 2043 3.819564 GTGCATACAGTGGACCTATCA 57.180 47.619 0.00 0.00 42.75 2.15
1853 2046 2.743938 CATACAGTGGACCTATCACGC 58.256 52.381 0.00 0.00 39.86 5.34
1861 2054 3.536917 CCTATCACGCAGCCCGGA 61.537 66.667 0.73 0.00 42.52 5.14
1947 2140 1.631405 CCATGTTGGTGGGTGTTGAT 58.369 50.000 0.00 0.00 35.55 2.57
2000 2193 0.944386 GCACACGAGTGGTTGAACAT 59.056 50.000 14.90 0.00 45.98 2.71
2036 2229 4.725556 TGCGACTACACTGAACAAATTC 57.274 40.909 0.00 0.00 35.18 2.17
2098 2291 1.945387 ATGTCATGTCGGATGCACTC 58.055 50.000 0.00 0.00 0.00 3.51
2130 2323 0.542333 TTCCCTCGTTGTTGTCCACA 59.458 50.000 0.00 0.00 0.00 4.17
2202 2395 3.146066 GTTCCATCACACCTTTACTGCA 58.854 45.455 0.00 0.00 0.00 4.41
2225 2418 0.170561 GAGAGTAAGAGTCGCCGCAA 59.829 55.000 0.00 0.00 0.00 4.85
2229 2422 1.076332 GTAAGAGTCGCCGCAACATT 58.924 50.000 0.00 0.00 0.00 2.71
2264 2457 1.655372 TGGTGACATGATGACCTCCA 58.345 50.000 0.00 4.53 33.40 3.86
2265 2458 1.556451 TGGTGACATGATGACCTCCAG 59.444 52.381 0.00 0.00 33.40 3.86
2266 2459 1.833630 GGTGACATGATGACCTCCAGA 59.166 52.381 0.00 0.00 0.00 3.86
2267 2460 2.419297 GGTGACATGATGACCTCCAGAC 60.419 54.545 0.00 0.00 0.00 3.51
2268 2461 2.234661 GTGACATGATGACCTCCAGACA 59.765 50.000 0.00 0.00 0.00 3.41
2269 2462 2.234661 TGACATGATGACCTCCAGACAC 59.765 50.000 0.00 0.00 0.00 3.67
2270 2463 1.556911 ACATGATGACCTCCAGACACC 59.443 52.381 0.00 0.00 0.00 4.16
2271 2464 1.836166 CATGATGACCTCCAGACACCT 59.164 52.381 0.00 0.00 0.00 4.00
2272 2465 1.561643 TGATGACCTCCAGACACCTC 58.438 55.000 0.00 0.00 0.00 3.85
2273 2466 0.827368 GATGACCTCCAGACACCTCC 59.173 60.000 0.00 0.00 0.00 4.30
2321 2514 0.251832 ACTGAGGTCATCGTGGGACT 60.252 55.000 0.00 0.00 35.61 3.85
2344 2537 2.351276 GTTGGGCCTCATGGTCGT 59.649 61.111 4.53 0.00 39.29 4.34
2435 2628 1.134965 CGAGGTTGGTCTGGATCTGTC 60.135 57.143 0.00 0.00 0.00 3.51
2453 2646 2.225041 TGTCCGGAGAAGAGGAGAGAAA 60.225 50.000 3.06 0.00 37.18 2.52
2502 2695 3.832175 AGGCTGACATGGAAGGCT 58.168 55.556 17.06 17.06 43.87 4.58
2556 2749 4.166725 TGGAATAGCCTGGATCAGAAATGT 59.833 41.667 0.00 0.00 37.63 2.71
2574 2767 7.067859 CAGAAATGTTATGTGAGAATGGGATGT 59.932 37.037 0.00 0.00 0.00 3.06
2796 3103 5.220739 CGATAAGACTTGAAGGCCTTGATTG 60.221 44.000 26.25 13.18 0.00 2.67
2883 3190 4.208047 GCTATTCTCGTGTTCTATGTGCAG 59.792 45.833 0.00 0.00 0.00 4.41
3018 3325 9.851686 ATGTAACAGAATTATCTATGCTTTCCA 57.148 29.630 0.00 0.00 33.50 3.53
3075 3382 8.138074 TGAGAATTCTACAGAAATCATCTACGG 58.862 37.037 8.25 0.00 36.64 4.02
3176 3504 6.094048 AGTCATCATACAACACATAAACCTGC 59.906 38.462 0.00 0.00 0.00 4.85
3177 3505 5.942826 TCATCATACAACACATAAACCTGCA 59.057 36.000 0.00 0.00 0.00 4.41
3180 3508 5.942826 TCATACAACACATAAACCTGCATGA 59.057 36.000 0.00 0.00 0.00 3.07
3259 3692 9.781834 TGATTATTTGGTTATCACAATTCGTTC 57.218 29.630 0.00 0.00 0.00 3.95
3281 3714 2.969821 TGTGTGGTTTAAGCTCCCAT 57.030 45.000 0.00 0.00 0.00 4.00
3284 3717 3.073209 TGTGTGGTTTAAGCTCCCATGTA 59.927 43.478 0.00 0.00 0.00 2.29
3290 3723 5.123936 GGTTTAAGCTCCCATGTACCTTAG 58.876 45.833 0.00 0.00 0.00 2.18
3410 3843 7.492344 GCTTACAATTGTAGCAAGGCATTATTT 59.508 33.333 23.56 0.00 0.00 1.40
3426 3859 7.563188 AGGCATTATTTGGTGTGGACATTTATA 59.437 33.333 0.00 0.00 0.00 0.98
3459 3892 0.035725 TTCCATCTGCTGCTCTGTGG 60.036 55.000 0.00 4.52 0.00 4.17
3573 4010 7.965107 CACTTCATATTCCTGCTAACTTTGTTC 59.035 37.037 0.00 0.00 0.00 3.18
3801 4238 0.895559 CTGGGAAGGGCAAGGTGAAC 60.896 60.000 0.00 0.00 0.00 3.18
3990 4427 9.887629 GATATCATGATGGTATCAGAGAAACAT 57.112 33.333 18.34 0.00 43.53 2.71
4008 4445 1.476085 CATTCTTAACATTGGGCGCCA 59.524 47.619 30.85 9.36 0.00 5.69
4085 4524 5.045869 CCATAGGACTTTACCAAGGACTTCA 60.046 44.000 0.00 0.00 33.82 3.02
4153 4592 2.810274 TGCTTTCTGACATCTCTGCAAC 59.190 45.455 0.00 0.00 0.00 4.17
4170 4609 4.257731 TGCAACTAAACATTCGGCTCATA 58.742 39.130 0.00 0.00 0.00 2.15
4270 4712 4.141620 CCACAAGTTGTCTAGGGATATGCT 60.142 45.833 5.27 0.00 0.00 3.79
4304 4746 3.056536 ACTTCTTGAGCGCTAGATTCACA 60.057 43.478 11.50 0.00 0.00 3.58
4431 4873 0.175760 CTACTGGACCATGACCACCG 59.824 60.000 0.00 3.11 33.57 4.94
4436 5200 1.324383 GGACCATGACCACCGTTTTT 58.676 50.000 0.00 0.00 0.00 1.94
4437 5201 2.158652 TGGACCATGACCACCGTTTTTA 60.159 45.455 7.36 0.00 32.03 1.52
4438 5202 3.086282 GGACCATGACCACCGTTTTTAT 58.914 45.455 0.00 0.00 0.00 1.40
4441 5205 2.165437 CCATGACCACCGTTTTTATGGG 59.835 50.000 0.00 0.00 32.09 4.00
4442 5206 1.249407 TGACCACCGTTTTTATGGGC 58.751 50.000 0.00 0.00 0.00 5.36
4444 5208 1.201414 GACCACCGTTTTTATGGGCTG 59.799 52.381 0.00 0.00 0.00 4.85
4445 5209 1.253100 CCACCGTTTTTATGGGCTGT 58.747 50.000 0.00 0.00 0.00 4.40
4447 5211 1.201414 CACCGTTTTTATGGGCTGTCC 59.799 52.381 0.00 0.00 0.00 4.02
4503 5296 3.790437 CAGGTCCGGAGCATGCCT 61.790 66.667 33.52 19.86 0.00 4.75
4504 5297 3.011517 AGGTCCGGAGCATGCCTT 61.012 61.111 33.52 10.77 0.00 4.35
4521 5314 1.734465 CCTTGCTTCATTCTCGTCACC 59.266 52.381 0.00 0.00 0.00 4.02
4523 5316 1.014044 TGCTTCATTCTCGTCACCGC 61.014 55.000 0.00 0.00 0.00 5.68
4524 5317 1.696832 GCTTCATTCTCGTCACCGCC 61.697 60.000 0.00 0.00 0.00 6.13
4592 5386 1.803366 AATCCGGACGAGTATCCCGC 61.803 60.000 6.12 0.00 38.40 6.13
4636 5430 5.929415 TCCCGGCAAACTTTTGATTTATTTC 59.071 36.000 5.87 0.00 40.55 2.17
4647 5441 8.398665 ACTTTTGATTTATTTCATCTAGGACGC 58.601 33.333 0.00 0.00 0.00 5.19
4648 5442 6.861065 TTGATTTATTTCATCTAGGACGCC 57.139 37.500 0.00 0.00 0.00 5.68
4649 5443 4.988540 TGATTTATTTCATCTAGGACGCCG 59.011 41.667 0.00 0.00 0.00 6.46
4650 5444 4.659111 TTTATTTCATCTAGGACGCCGA 57.341 40.909 0.00 0.00 0.00 5.54
4651 5445 4.866508 TTATTTCATCTAGGACGCCGAT 57.133 40.909 0.00 0.00 0.00 4.18
4652 5446 5.970317 TTATTTCATCTAGGACGCCGATA 57.030 39.130 0.00 0.00 0.00 2.92
4653 5447 4.866508 ATTTCATCTAGGACGCCGATAA 57.133 40.909 0.00 0.00 0.00 1.75
4654 5448 3.637998 TTCATCTAGGACGCCGATAAC 57.362 47.619 0.00 0.00 0.00 1.89
4655 5449 2.860009 TCATCTAGGACGCCGATAACT 58.140 47.619 0.00 0.00 0.00 2.24
4656 5450 2.552743 TCATCTAGGACGCCGATAACTG 59.447 50.000 0.00 0.00 0.00 3.16
4657 5451 0.666913 TCTAGGACGCCGATAACTGC 59.333 55.000 0.00 0.00 0.00 4.40
4658 5452 0.318784 CTAGGACGCCGATAACTGCC 60.319 60.000 0.00 0.00 0.00 4.85
4659 5453 1.038681 TAGGACGCCGATAACTGCCA 61.039 55.000 0.00 0.00 0.00 4.92
4660 5454 2.171725 GGACGCCGATAACTGCCAC 61.172 63.158 0.00 0.00 0.00 5.01
4661 5455 1.447140 GACGCCGATAACTGCCACA 60.447 57.895 0.00 0.00 0.00 4.17
4662 5456 1.693083 GACGCCGATAACTGCCACAC 61.693 60.000 0.00 0.00 0.00 3.82
4663 5457 2.798501 CGCCGATAACTGCCACACG 61.799 63.158 0.00 0.00 0.00 4.49
4664 5458 1.447140 GCCGATAACTGCCACACGA 60.447 57.895 0.00 0.00 0.00 4.35
4665 5459 1.421410 GCCGATAACTGCCACACGAG 61.421 60.000 0.00 0.00 0.00 4.18
4666 5460 0.108804 CCGATAACTGCCACACGAGT 60.109 55.000 0.00 0.00 0.00 4.18
4667 5461 0.992072 CGATAACTGCCACACGAGTG 59.008 55.000 5.96 5.96 45.47 3.51
4678 5472 1.935873 CACACGAGTGGCATCTAATGG 59.064 52.381 4.94 0.00 42.13 3.16
4679 5473 1.134401 ACACGAGTGGCATCTAATGGG 60.134 52.381 8.19 0.00 34.19 4.00
4680 5474 1.134401 CACGAGTGGCATCTAATGGGT 60.134 52.381 0.00 0.00 0.00 4.51
4681 5475 1.559682 ACGAGTGGCATCTAATGGGTT 59.440 47.619 0.00 0.00 0.00 4.11
4682 5476 1.942657 CGAGTGGCATCTAATGGGTTG 59.057 52.381 0.00 0.00 0.00 3.77
4683 5477 2.680805 CGAGTGGCATCTAATGGGTTGT 60.681 50.000 0.00 0.00 0.00 3.32
4684 5478 2.684881 GAGTGGCATCTAATGGGTTGTG 59.315 50.000 0.00 0.00 0.00 3.33
4685 5479 1.134946 GTGGCATCTAATGGGTTGTGC 59.865 52.381 0.00 0.00 0.00 4.57
4686 5480 0.746659 GGCATCTAATGGGTTGTGCC 59.253 55.000 0.00 0.00 44.37 5.01
4687 5481 0.381801 GCATCTAATGGGTTGTGCCG 59.618 55.000 0.00 0.00 38.44 5.69
4688 5482 0.381801 CATCTAATGGGTTGTGCCGC 59.618 55.000 0.00 0.00 38.44 6.53
4689 5483 0.034574 ATCTAATGGGTTGTGCCGCA 60.035 50.000 0.00 0.00 38.44 5.69
4690 5484 0.958382 TCTAATGGGTTGTGCCGCAC 60.958 55.000 16.93 16.93 38.44 5.34
4691 5485 2.252127 CTAATGGGTTGTGCCGCACG 62.252 60.000 18.41 0.00 37.14 5.34
4696 5490 4.374702 GTTGTGCCGCACGCTCTG 62.375 66.667 18.41 0.00 37.14 3.35
4697 5491 4.908687 TTGTGCCGCACGCTCTGT 62.909 61.111 18.41 0.00 37.14 3.41
4705 5499 3.705638 CACGCTCTGTGTGGCACG 61.706 66.667 13.77 1.10 43.88 5.34
4706 5500 4.969196 ACGCTCTGTGTGGCACGG 62.969 66.667 13.77 5.96 41.65 4.94
4707 5501 4.662961 CGCTCTGTGTGGCACGGA 62.663 66.667 13.77 10.00 45.99 4.69
4710 5504 2.734591 TCTGTGTGGCACGGAGAC 59.265 61.111 13.77 6.00 43.73 3.36
4754 5548 3.360340 GCGCATCCAGCCATAGCC 61.360 66.667 0.30 0.00 41.25 3.93
4755 5549 2.670934 CGCATCCAGCCATAGCCC 60.671 66.667 0.00 0.00 41.25 5.19
4756 5550 2.670934 GCATCCAGCCATAGCCCG 60.671 66.667 0.00 0.00 41.25 6.13
4757 5551 2.670934 CATCCAGCCATAGCCCGC 60.671 66.667 0.00 0.00 41.25 6.13
4758 5552 3.170672 ATCCAGCCATAGCCCGCA 61.171 61.111 0.00 0.00 41.25 5.69
4759 5553 3.482232 ATCCAGCCATAGCCCGCAC 62.482 63.158 0.00 0.00 41.25 5.34
4761 5555 4.838152 CAGCCATAGCCCGCACGT 62.838 66.667 0.00 0.00 41.25 4.49
4762 5556 4.530857 AGCCATAGCCCGCACGTC 62.531 66.667 0.00 0.00 41.25 4.34
4774 5568 4.901123 CACGTCCGGTGTGTGGCA 62.901 66.667 17.74 0.00 41.89 4.92
4775 5569 4.903010 ACGTCCGGTGTGTGGCAC 62.903 66.667 11.55 11.55 46.97 5.01
4789 5583 3.353836 GCACAATCGCCCACACGT 61.354 61.111 0.00 0.00 0.00 4.49
4790 5584 2.860293 CACAATCGCCCACACGTC 59.140 61.111 0.00 0.00 0.00 4.34
4791 5585 1.667830 CACAATCGCCCACACGTCT 60.668 57.895 0.00 0.00 0.00 4.18
4792 5586 1.667830 ACAATCGCCCACACGTCTG 60.668 57.895 0.00 0.00 0.00 3.51
4793 5587 2.047274 AATCGCCCACACGTCTGG 60.047 61.111 2.34 2.34 0.00 3.86
4798 5592 4.082523 CCCACACGTCTGGGCGAT 62.083 66.667 16.53 0.00 44.85 4.58
4799 5593 2.509336 CCACACGTCTGGGCGATC 60.509 66.667 1.21 0.00 35.59 3.69
4800 5594 2.880879 CACACGTCTGGGCGATCG 60.881 66.667 11.69 11.69 35.59 3.69
4801 5595 3.060000 ACACGTCTGGGCGATCGA 61.060 61.111 21.57 0.00 35.59 3.59
4802 5596 2.278206 CACGTCTGGGCGATCGAG 60.278 66.667 21.57 7.71 35.59 4.04
4803 5597 4.194720 ACGTCTGGGCGATCGAGC 62.195 66.667 21.57 0.79 35.59 5.03
4851 5645 3.081409 GTCCCGGCCTGCCTTCTA 61.081 66.667 6.60 0.00 0.00 2.10
4852 5646 2.285069 TCCCGGCCTGCCTTCTAA 60.285 61.111 6.60 0.00 0.00 2.10
4853 5647 2.124695 CCCGGCCTGCCTTCTAAC 60.125 66.667 6.60 0.00 0.00 2.34
4854 5648 2.124695 CCGGCCTGCCTTCTAACC 60.125 66.667 6.60 0.00 0.00 2.85
4855 5649 2.124695 CGGCCTGCCTTCTAACCC 60.125 66.667 6.60 0.00 0.00 4.11
4856 5650 2.275748 GGCCTGCCTTCTAACCCC 59.724 66.667 0.00 0.00 0.00 4.95
4857 5651 2.612493 GGCCTGCCTTCTAACCCCA 61.612 63.158 0.00 0.00 0.00 4.96
4858 5652 1.615262 GCCTGCCTTCTAACCCCAT 59.385 57.895 0.00 0.00 0.00 4.00
4859 5653 0.033109 GCCTGCCTTCTAACCCCATT 60.033 55.000 0.00 0.00 0.00 3.16
4860 5654 2.024306 GCCTGCCTTCTAACCCCATTC 61.024 57.143 0.00 0.00 0.00 2.67
4861 5655 1.410224 CCTGCCTTCTAACCCCATTCC 60.410 57.143 0.00 0.00 0.00 3.01
4862 5656 0.254747 TGCCTTCTAACCCCATTCCG 59.745 55.000 0.00 0.00 0.00 4.30
4863 5657 1.101635 GCCTTCTAACCCCATTCCGC 61.102 60.000 0.00 0.00 0.00 5.54
4864 5658 0.465642 CCTTCTAACCCCATTCCGCC 60.466 60.000 0.00 0.00 0.00 6.13
4865 5659 0.465642 CTTCTAACCCCATTCCGCCC 60.466 60.000 0.00 0.00 0.00 6.13
4866 5660 0.917333 TTCTAACCCCATTCCGCCCT 60.917 55.000 0.00 0.00 0.00 5.19
4867 5661 1.152963 CTAACCCCATTCCGCCCTG 60.153 63.158 0.00 0.00 0.00 4.45
4868 5662 1.921869 CTAACCCCATTCCGCCCTGT 61.922 60.000 0.00 0.00 0.00 4.00
4869 5663 1.917336 TAACCCCATTCCGCCCTGTC 61.917 60.000 0.00 0.00 0.00 3.51
4870 5664 4.856801 CCCCATTCCGCCCTGTCG 62.857 72.222 0.00 0.00 0.00 4.35
4880 5674 4.477975 CCCTGTCGCCGTCGTCTC 62.478 72.222 0.00 0.00 36.96 3.36
4881 5675 4.477975 CCTGTCGCCGTCGTCTCC 62.478 72.222 0.00 0.00 36.96 3.71
4882 5676 3.432588 CTGTCGCCGTCGTCTCCT 61.433 66.667 0.00 0.00 36.96 3.69
4883 5677 2.046988 TGTCGCCGTCGTCTCCTA 60.047 61.111 0.00 0.00 36.96 2.94
4884 5678 2.307137 CTGTCGCCGTCGTCTCCTAC 62.307 65.000 0.00 0.00 36.96 3.18
4885 5679 2.821366 TCGCCGTCGTCTCCTACC 60.821 66.667 0.00 0.00 36.96 3.18
4886 5680 2.823147 CGCCGTCGTCTCCTACCT 60.823 66.667 0.00 0.00 0.00 3.08
4887 5681 2.821688 CGCCGTCGTCTCCTACCTC 61.822 68.421 0.00 0.00 0.00 3.85
4888 5682 1.451747 GCCGTCGTCTCCTACCTCT 60.452 63.158 0.00 0.00 0.00 3.69
4889 5683 1.438562 GCCGTCGTCTCCTACCTCTC 61.439 65.000 0.00 0.00 0.00 3.20
4890 5684 1.152989 CCGTCGTCTCCTACCTCTCG 61.153 65.000 0.00 0.00 0.00 4.04
4891 5685 0.179116 CGTCGTCTCCTACCTCTCGA 60.179 60.000 0.00 0.00 0.00 4.04
4892 5686 1.538634 CGTCGTCTCCTACCTCTCGAT 60.539 57.143 0.00 0.00 0.00 3.59
4893 5687 2.137523 GTCGTCTCCTACCTCTCGATC 58.862 57.143 0.00 0.00 0.00 3.69
4894 5688 2.040939 TCGTCTCCTACCTCTCGATCT 58.959 52.381 0.00 0.00 0.00 2.75
4895 5689 2.036217 TCGTCTCCTACCTCTCGATCTC 59.964 54.545 0.00 0.00 0.00 2.75
4896 5690 2.774687 GTCTCCTACCTCTCGATCTCC 58.225 57.143 0.00 0.00 0.00 3.71
4897 5691 2.370849 GTCTCCTACCTCTCGATCTCCT 59.629 54.545 0.00 0.00 0.00 3.69
4898 5692 3.579586 GTCTCCTACCTCTCGATCTCCTA 59.420 52.174 0.00 0.00 0.00 2.94
4899 5693 3.579586 TCTCCTACCTCTCGATCTCCTAC 59.420 52.174 0.00 0.00 0.00 3.18
4900 5694 2.638855 TCCTACCTCTCGATCTCCTACC 59.361 54.545 0.00 0.00 0.00 3.18
4901 5695 2.640826 CCTACCTCTCGATCTCCTACCT 59.359 54.545 0.00 0.00 0.00 3.08
4902 5696 3.073356 CCTACCTCTCGATCTCCTACCTT 59.927 52.174 0.00 0.00 0.00 3.50
4903 5697 3.217681 ACCTCTCGATCTCCTACCTTC 57.782 52.381 0.00 0.00 0.00 3.46
4904 5698 2.510382 ACCTCTCGATCTCCTACCTTCA 59.490 50.000 0.00 0.00 0.00 3.02
4905 5699 3.139397 ACCTCTCGATCTCCTACCTTCAT 59.861 47.826 0.00 0.00 0.00 2.57
4906 5700 3.756434 CCTCTCGATCTCCTACCTTCATC 59.244 52.174 0.00 0.00 0.00 2.92
4907 5701 3.403968 TCTCGATCTCCTACCTTCATCG 58.596 50.000 0.00 0.00 38.14 3.84
4908 5702 3.142951 CTCGATCTCCTACCTTCATCGT 58.857 50.000 0.00 0.00 38.02 3.73
4909 5703 3.139850 TCGATCTCCTACCTTCATCGTC 58.860 50.000 0.00 0.00 38.02 4.20
4910 5704 3.142951 CGATCTCCTACCTTCATCGTCT 58.857 50.000 0.00 0.00 33.29 4.18
4911 5705 3.566322 CGATCTCCTACCTTCATCGTCTT 59.434 47.826 0.00 0.00 33.29 3.01
4912 5706 4.036971 CGATCTCCTACCTTCATCGTCTTT 59.963 45.833 0.00 0.00 33.29 2.52
4913 5707 4.985538 TCTCCTACCTTCATCGTCTTTC 57.014 45.455 0.00 0.00 0.00 2.62
4914 5708 4.601084 TCTCCTACCTTCATCGTCTTTCT 58.399 43.478 0.00 0.00 0.00 2.52
4915 5709 5.017490 TCTCCTACCTTCATCGTCTTTCTT 58.983 41.667 0.00 0.00 0.00 2.52
4916 5710 5.125739 TCTCCTACCTTCATCGTCTTTCTTC 59.874 44.000 0.00 0.00 0.00 2.87
4917 5711 5.017490 TCCTACCTTCATCGTCTTTCTTCT 58.983 41.667 0.00 0.00 0.00 2.85
4918 5712 5.125739 TCCTACCTTCATCGTCTTTCTTCTC 59.874 44.000 0.00 0.00 0.00 2.87
4919 5713 5.126384 CCTACCTTCATCGTCTTTCTTCTCT 59.874 44.000 0.00 0.00 0.00 3.10
4920 5714 4.815269 ACCTTCATCGTCTTTCTTCTCTG 58.185 43.478 0.00 0.00 0.00 3.35
4921 5715 4.180057 CCTTCATCGTCTTTCTTCTCTGG 58.820 47.826 0.00 0.00 0.00 3.86
4922 5716 4.322349 CCTTCATCGTCTTTCTTCTCTGGT 60.322 45.833 0.00 0.00 0.00 4.00
4923 5717 4.873746 TCATCGTCTTTCTTCTCTGGTT 57.126 40.909 0.00 0.00 0.00 3.67
4924 5718 4.560128 TCATCGTCTTTCTTCTCTGGTTG 58.440 43.478 0.00 0.00 0.00 3.77
4925 5719 2.755650 TCGTCTTTCTTCTCTGGTTGC 58.244 47.619 0.00 0.00 0.00 4.17
4926 5720 1.801178 CGTCTTTCTTCTCTGGTTGCC 59.199 52.381 0.00 0.00 0.00 4.52
4927 5721 2.806745 CGTCTTTCTTCTCTGGTTGCCA 60.807 50.000 0.00 0.00 0.00 4.92
4928 5722 3.416156 GTCTTTCTTCTCTGGTTGCCAT 58.584 45.455 0.00 0.00 30.82 4.40
4929 5723 3.190118 GTCTTTCTTCTCTGGTTGCCATG 59.810 47.826 0.00 0.00 30.82 3.66
4930 5724 2.205022 TTCTTCTCTGGTTGCCATGG 57.795 50.000 7.63 7.63 30.82 3.66
4931 5725 0.322816 TCTTCTCTGGTTGCCATGGC 60.323 55.000 30.54 30.54 42.35 4.40
4941 5735 2.283101 GCCATGGCAACCAGACCA 60.283 61.111 32.08 0.00 36.75 4.02
4942 5736 2.345760 GCCATGGCAACCAGACCAG 61.346 63.158 32.08 0.00 39.88 4.00
4943 5737 1.379916 CCATGGCAACCAGACCAGA 59.620 57.895 0.00 0.00 39.88 3.86
4944 5738 0.033796 CCATGGCAACCAGACCAGAT 60.034 55.000 0.00 0.00 39.88 2.90
4945 5739 1.386533 CATGGCAACCAGACCAGATC 58.613 55.000 0.00 0.00 39.88 2.75
4946 5740 1.064906 CATGGCAACCAGACCAGATCT 60.065 52.381 0.00 0.00 39.88 2.75
4947 5741 0.615331 TGGCAACCAGACCAGATCTC 59.385 55.000 0.00 0.00 34.41 2.75
4948 5742 0.908198 GGCAACCAGACCAGATCTCT 59.092 55.000 0.00 0.00 34.41 3.10
4949 5743 2.111384 GGCAACCAGACCAGATCTCTA 58.889 52.381 0.00 0.00 34.41 2.43
4950 5744 2.102252 GGCAACCAGACCAGATCTCTAG 59.898 54.545 0.00 0.00 34.41 2.43
4951 5745 2.482839 GCAACCAGACCAGATCTCTAGC 60.483 54.545 0.00 0.00 34.41 3.42
4952 5746 1.686355 ACCAGACCAGATCTCTAGCG 58.314 55.000 0.00 0.00 34.41 4.26
4953 5747 0.313672 CCAGACCAGATCTCTAGCGC 59.686 60.000 0.00 0.00 34.41 5.92
4954 5748 0.313672 CAGACCAGATCTCTAGCGCC 59.686 60.000 2.29 0.00 34.41 6.53
4955 5749 0.184933 AGACCAGATCTCTAGCGCCT 59.815 55.000 2.29 0.00 28.16 5.52
4956 5750 0.596082 GACCAGATCTCTAGCGCCTC 59.404 60.000 2.29 0.00 0.00 4.70
4957 5751 0.825840 ACCAGATCTCTAGCGCCTCC 60.826 60.000 2.29 0.00 0.00 4.30
4958 5752 1.531739 CCAGATCTCTAGCGCCTCCC 61.532 65.000 2.29 0.00 0.00 4.30
4959 5753 1.228737 AGATCTCTAGCGCCTCCCC 60.229 63.158 2.29 0.00 0.00 4.81
4960 5754 1.531840 GATCTCTAGCGCCTCCCCA 60.532 63.158 2.29 0.00 0.00 4.96
4961 5755 0.902516 GATCTCTAGCGCCTCCCCAT 60.903 60.000 2.29 0.00 0.00 4.00
4962 5756 0.902516 ATCTCTAGCGCCTCCCCATC 60.903 60.000 2.29 0.00 0.00 3.51
4963 5757 2.524394 TCTAGCGCCTCCCCATCC 60.524 66.667 2.29 0.00 0.00 3.51
4964 5758 3.631046 CTAGCGCCTCCCCATCCC 61.631 72.222 2.29 0.00 0.00 3.85
4969 5763 3.584403 GCCTCCCCATCCCCCATC 61.584 72.222 0.00 0.00 0.00 3.51
4970 5764 2.860971 CCTCCCCATCCCCCATCC 60.861 72.222 0.00 0.00 0.00 3.51
4971 5765 2.860971 CTCCCCATCCCCCATCCC 60.861 72.222 0.00 0.00 0.00 3.85
4972 5766 4.549741 TCCCCATCCCCCATCCCC 62.550 72.222 0.00 0.00 0.00 4.81
4973 5767 4.881381 CCCCATCCCCCATCCCCA 62.881 72.222 0.00 0.00 0.00 4.96
4974 5768 3.511610 CCCATCCCCCATCCCCAC 61.512 72.222 0.00 0.00 0.00 4.61
4975 5769 3.511610 CCATCCCCCATCCCCACC 61.512 72.222 0.00 0.00 0.00 4.61
4976 5770 3.889692 CATCCCCCATCCCCACCG 61.890 72.222 0.00 0.00 0.00 4.94
4999 5793 4.467084 CCCACCCCCACGACGATG 62.467 72.222 0.00 0.00 0.00 3.84
5000 5794 3.387091 CCACCCCCACGACGATGA 61.387 66.667 0.00 0.00 0.00 2.92
5001 5795 2.184322 CACCCCCACGACGATGAG 59.816 66.667 0.00 0.00 0.00 2.90
5002 5796 3.771160 ACCCCCACGACGATGAGC 61.771 66.667 0.00 0.00 0.00 4.26
5003 5797 3.461773 CCCCCACGACGATGAGCT 61.462 66.667 0.00 0.00 0.00 4.09
5004 5798 2.125326 CCCCCACGACGATGAGCTA 61.125 63.158 0.00 0.00 0.00 3.32
5005 5799 1.672854 CCCCCACGACGATGAGCTAA 61.673 60.000 0.00 0.00 0.00 3.09
5006 5800 0.527817 CCCCACGACGATGAGCTAAC 60.528 60.000 0.00 0.00 0.00 2.34
5007 5801 0.172578 CCCACGACGATGAGCTAACA 59.827 55.000 0.00 0.00 0.00 2.41
5008 5802 1.550065 CCACGACGATGAGCTAACAG 58.450 55.000 0.00 0.00 0.00 3.16
5009 5803 1.550065 CACGACGATGAGCTAACAGG 58.450 55.000 0.00 0.00 0.00 4.00
5010 5804 1.135373 CACGACGATGAGCTAACAGGT 60.135 52.381 0.00 0.00 0.00 4.00
5011 5805 1.132643 ACGACGATGAGCTAACAGGTC 59.867 52.381 0.00 0.00 42.72 3.85
5012 5806 1.828832 GACGATGAGCTAACAGGTCG 58.171 55.000 0.00 0.00 45.17 4.79
5013 5807 1.400846 GACGATGAGCTAACAGGTCGA 59.599 52.381 0.00 0.00 45.17 4.20
5014 5808 2.025155 ACGATGAGCTAACAGGTCGAT 58.975 47.619 0.00 0.00 45.17 3.59
5015 5809 2.033550 ACGATGAGCTAACAGGTCGATC 59.966 50.000 0.00 0.00 45.17 3.69
5016 5810 2.292016 CGATGAGCTAACAGGTCGATCT 59.708 50.000 0.00 0.00 45.17 2.75
5017 5811 3.243234 CGATGAGCTAACAGGTCGATCTT 60.243 47.826 0.00 0.00 45.17 2.40
5018 5812 3.784701 TGAGCTAACAGGTCGATCTTC 57.215 47.619 0.00 0.00 45.17 2.87
5019 5813 2.097629 TGAGCTAACAGGTCGATCTTCG 59.902 50.000 0.00 0.00 45.17 3.79
5031 5825 4.294416 TCGATCTTCGATCTCCTGTTTC 57.706 45.455 0.00 0.00 44.82 2.78
5032 5826 3.948473 TCGATCTTCGATCTCCTGTTTCT 59.052 43.478 0.00 0.00 44.82 2.52
5033 5827 4.035792 TCGATCTTCGATCTCCTGTTTCTC 59.964 45.833 0.00 0.00 44.82 2.87
5034 5828 3.766676 TCTTCGATCTCCTGTTTCTCG 57.233 47.619 0.00 0.00 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.806146 AGCACATCATTGTTCCTAAAAATAGTT 58.194 29.630 0.00 0.00 32.34 2.24
2 3 8.353423 AGCACATCATTGTTCCTAAAAATAGT 57.647 30.769 0.00 0.00 32.34 2.12
3 4 9.941664 CTAGCACATCATTGTTCCTAAAAATAG 57.058 33.333 0.00 0.00 32.34 1.73
4 5 8.405531 GCTAGCACATCATTGTTCCTAAAAATA 58.594 33.333 10.63 0.00 32.34 1.40
5 6 7.260603 GCTAGCACATCATTGTTCCTAAAAAT 58.739 34.615 10.63 0.00 32.34 1.82
60 174 6.636705 AGTCATGCATGCAAGTCATAAATTT 58.363 32.000 26.68 0.00 33.19 1.82
152 296 8.583810 AAAAATCACTATTGTATGCATGCATC 57.416 30.769 35.35 25.09 37.82 3.91
226 372 8.338259 CGCAGCTGAATATAAGTACAAAAGAAT 58.662 33.333 20.43 0.00 0.00 2.40
235 381 7.117812 GCTTATTTCCGCAGCTGAATATAAGTA 59.882 37.037 20.43 2.25 32.62 2.24
236 382 6.073003 GCTTATTTCCGCAGCTGAATATAAGT 60.073 38.462 20.43 3.20 32.62 2.24
248 394 0.026803 GCGACAGCTTATTTCCGCAG 59.973 55.000 0.00 0.00 41.89 5.18
323 469 8.438676 AGACAAATATTTAAGAACGGAGATGG 57.561 34.615 0.00 0.00 0.00 3.51
342 488 9.651913 ACTTGCTGAAATCTTTAAAAAGACAAA 57.348 25.926 7.29 0.00 46.80 2.83
343 489 9.086336 CACTTGCTGAAATCTTTAAAAAGACAA 57.914 29.630 7.29 5.76 46.80 3.18
344 490 8.465999 TCACTTGCTGAAATCTTTAAAAAGACA 58.534 29.630 7.29 1.57 46.80 3.41
345 491 8.746751 GTCACTTGCTGAAATCTTTAAAAAGAC 58.253 33.333 7.29 0.00 46.80 3.01
347 493 8.862550 AGTCACTTGCTGAAATCTTTAAAAAG 57.137 30.769 0.00 0.00 37.36 2.27
348 494 9.730420 GTAGTCACTTGCTGAAATCTTTAAAAA 57.270 29.630 0.00 0.00 0.00 1.94
349 495 8.898761 TGTAGTCACTTGCTGAAATCTTTAAAA 58.101 29.630 0.00 0.00 0.00 1.52
350 496 8.445275 TGTAGTCACTTGCTGAAATCTTTAAA 57.555 30.769 0.00 0.00 0.00 1.52
351 497 8.621532 ATGTAGTCACTTGCTGAAATCTTTAA 57.378 30.769 0.00 0.00 0.00 1.52
352 498 9.151471 GTATGTAGTCACTTGCTGAAATCTTTA 57.849 33.333 0.00 0.00 0.00 1.85
353 499 7.148573 CGTATGTAGTCACTTGCTGAAATCTTT 60.149 37.037 0.00 0.00 0.00 2.52
354 500 6.311445 CGTATGTAGTCACTTGCTGAAATCTT 59.689 38.462 0.00 0.00 0.00 2.40
355 501 5.807520 CGTATGTAGTCACTTGCTGAAATCT 59.192 40.000 0.00 0.00 0.00 2.40
356 502 5.805486 TCGTATGTAGTCACTTGCTGAAATC 59.195 40.000 0.00 0.00 0.00 2.17
357 503 5.720202 TCGTATGTAGTCACTTGCTGAAAT 58.280 37.500 0.00 0.00 0.00 2.17
358 504 5.128992 TCGTATGTAGTCACTTGCTGAAA 57.871 39.130 0.00 0.00 0.00 2.69
359 505 4.776795 TCGTATGTAGTCACTTGCTGAA 57.223 40.909 0.00 0.00 0.00 3.02
360 506 4.733850 CTTCGTATGTAGTCACTTGCTGA 58.266 43.478 0.00 0.00 0.00 4.26
361 507 3.304559 GCTTCGTATGTAGTCACTTGCTG 59.695 47.826 0.00 0.00 0.00 4.41
362 508 3.056821 TGCTTCGTATGTAGTCACTTGCT 60.057 43.478 0.00 0.00 0.00 3.91
363 509 3.250744 TGCTTCGTATGTAGTCACTTGC 58.749 45.455 0.00 0.00 0.00 4.01
364 510 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
365 511 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
366 512 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
367 513 6.403333 TCATTTTGCTTCGTATGTAGTCAC 57.597 37.500 0.00 0.00 0.00 3.67
368 514 7.333174 TCATTCATTTTGCTTCGTATGTAGTCA 59.667 33.333 0.00 0.00 0.00 3.41
369 515 7.684670 TCATTCATTTTGCTTCGTATGTAGTC 58.315 34.615 0.00 0.00 0.00 2.59
370 516 7.609760 TCATTCATTTTGCTTCGTATGTAGT 57.390 32.000 0.00 0.00 0.00 2.73
371 517 9.162793 GATTCATTCATTTTGCTTCGTATGTAG 57.837 33.333 0.00 0.00 0.00 2.74
372 518 8.892723 AGATTCATTCATTTTGCTTCGTATGTA 58.107 29.630 0.00 0.00 0.00 2.29
373 519 7.765307 AGATTCATTCATTTTGCTTCGTATGT 58.235 30.769 0.00 0.00 0.00 2.29
374 520 9.162793 GTAGATTCATTCATTTTGCTTCGTATG 57.837 33.333 0.00 0.00 0.00 2.39
375 521 8.892723 TGTAGATTCATTCATTTTGCTTCGTAT 58.107 29.630 0.00 0.00 0.00 3.06
376 522 8.175069 GTGTAGATTCATTCATTTTGCTTCGTA 58.825 33.333 0.00 0.00 0.00 3.43
377 523 7.023575 GTGTAGATTCATTCATTTTGCTTCGT 58.976 34.615 0.00 0.00 0.00 3.85
378 524 7.246311 AGTGTAGATTCATTCATTTTGCTTCG 58.754 34.615 0.00 0.00 0.00 3.79
379 525 8.976986 AAGTGTAGATTCATTCATTTTGCTTC 57.023 30.769 0.00 0.00 0.00 3.86
455 601 9.908152 CCCTTCGTTTCTAAATATTTGTCTTTT 57.092 29.630 11.05 0.00 0.00 2.27
456 602 9.292195 TCCCTTCGTTTCTAAATATTTGTCTTT 57.708 29.630 11.05 0.00 0.00 2.52
457 603 8.857694 TCCCTTCGTTTCTAAATATTTGTCTT 57.142 30.769 11.05 0.00 0.00 3.01
458 604 8.101419 ACTCCCTTCGTTTCTAAATATTTGTCT 58.899 33.333 11.05 0.00 0.00 3.41
459 605 8.265165 ACTCCCTTCGTTTCTAAATATTTGTC 57.735 34.615 11.05 0.00 0.00 3.18
460 606 9.729281 TTACTCCCTTCGTTTCTAAATATTTGT 57.271 29.630 11.05 0.00 0.00 2.83
470 616 8.913487 TCTAAAATTTTACTCCCTTCGTTTCT 57.087 30.769 6.54 0.00 0.00 2.52
514 660 0.039035 ATAAGTTGGCGCCTTCCCAA 59.961 50.000 29.70 10.44 39.91 4.12
519 665 4.142249 GGTATGAAAATAAGTTGGCGCCTT 60.142 41.667 29.70 16.60 0.00 4.35
539 685 4.773674 TCTTTCAGAGTTTATGGTCGGGTA 59.226 41.667 0.00 0.00 0.00 3.69
596 742 8.786955 CGCGTGTCTAGATTTTATATAAGCTAC 58.213 37.037 0.00 0.00 0.00 3.58
597 743 7.484007 GCGCGTGTCTAGATTTTATATAAGCTA 59.516 37.037 8.43 1.76 0.00 3.32
598 744 6.308282 GCGCGTGTCTAGATTTTATATAAGCT 59.692 38.462 8.43 0.00 0.00 3.74
600 746 7.562640 TGCGCGTGTCTAGATTTTATATAAG 57.437 36.000 8.43 0.00 0.00 1.73
601 747 7.933728 TTGCGCGTGTCTAGATTTTATATAA 57.066 32.000 8.43 0.00 0.00 0.98
603 749 6.838198 TTTGCGCGTGTCTAGATTTTATAT 57.162 33.333 8.43 0.00 0.00 0.86
604 750 6.650239 TTTTGCGCGTGTCTAGATTTTATA 57.350 33.333 8.43 0.00 0.00 0.98
605 751 5.539582 TTTTGCGCGTGTCTAGATTTTAT 57.460 34.783 8.43 0.00 0.00 1.40
606 752 4.994220 TTTTGCGCGTGTCTAGATTTTA 57.006 36.364 8.43 0.00 0.00 1.52
607 753 3.889196 TTTTGCGCGTGTCTAGATTTT 57.111 38.095 8.43 0.00 0.00 1.82
608 754 3.889196 TTTTTGCGCGTGTCTAGATTT 57.111 38.095 8.43 0.00 0.00 2.17
628 774 9.835389 CAATTCTTTGAGGATCTCTAGATTCTT 57.165 33.333 2.27 0.00 40.39 2.52
629 775 9.211410 TCAATTCTTTGAGGATCTCTAGATTCT 57.789 33.333 0.09 0.09 42.92 2.40
630 776 9.829507 TTCAATTCTTTGAGGATCTCTAGATTC 57.170 33.333 0.00 0.00 42.60 2.52
696 843 4.495844 CGTCCCATTTCCGCTATCTTTTTC 60.496 45.833 0.00 0.00 0.00 2.29
827 974 0.905357 ACATTAACTGCTCGGCCTCT 59.095 50.000 0.00 0.00 0.00 3.69
893 1040 5.327732 GAGGATGGATCTGAATCTCTCTCT 58.672 45.833 0.00 0.00 32.12 3.10
894 1041 4.156556 CGAGGATGGATCTGAATCTCTCTC 59.843 50.000 0.00 0.00 32.12 3.20
895 1042 4.081406 CGAGGATGGATCTGAATCTCTCT 58.919 47.826 0.00 0.00 32.12 3.10
896 1043 3.367292 GCGAGGATGGATCTGAATCTCTC 60.367 52.174 0.00 3.33 32.12 3.20
964 1113 2.244946 CGACAGAGATCGCCGGATA 58.755 57.895 5.05 0.00 34.90 2.59
1046 1195 0.179045 AACATCGTATCTGCTGGCCC 60.179 55.000 0.00 0.00 0.00 5.80
1075 1224 1.373435 CAGCACCCCGTAGAACCAA 59.627 57.895 0.00 0.00 0.00 3.67
1242 1391 1.295792 GAAACACACAGAAGCACGGA 58.704 50.000 0.00 0.00 0.00 4.69
1425 1574 6.682611 GCAGAGGCAGCCTAATACAGATATAG 60.683 46.154 16.16 0.00 40.72 1.31
1475 1624 7.659390 AGAAATGACGAGAAGGAATCATATTCC 59.341 37.037 10.15 10.15 38.86 3.01
1476 1625 8.600449 AGAAATGACGAGAAGGAATCATATTC 57.400 34.615 0.00 0.00 31.56 1.75
1478 1627 9.868277 GATAGAAATGACGAGAAGGAATCATAT 57.132 33.333 0.00 0.00 31.56 1.78
1479 1628 8.307483 GGATAGAAATGACGAGAAGGAATCATA 58.693 37.037 0.00 0.00 31.56 2.15
1511 1660 6.691388 ACAGTCGCTCTTTTCAACAATTAAAC 59.309 34.615 0.00 0.00 0.00 2.01
1549 1698 8.822805 TCCTTGAGTACTATTACAAAGGACAAT 58.177 33.333 16.83 0.00 42.64 2.71
1595 1774 4.257267 ACTTAGAAAGGTTGGCAATTGC 57.743 40.909 22.47 22.47 41.14 3.56
1596 1775 8.306761 AGAAATACTTAGAAAGGTTGGCAATTG 58.693 33.333 1.92 0.00 0.00 2.32
1597 1776 8.306761 CAGAAATACTTAGAAAGGTTGGCAATT 58.693 33.333 1.92 0.00 0.00 2.32
1598 1777 7.451566 ACAGAAATACTTAGAAAGGTTGGCAAT 59.548 33.333 1.92 0.00 0.00 3.56
1599 1778 6.775629 ACAGAAATACTTAGAAAGGTTGGCAA 59.224 34.615 0.00 0.00 0.00 4.52
1600 1779 6.303839 ACAGAAATACTTAGAAAGGTTGGCA 58.696 36.000 0.00 0.00 0.00 4.92
1601 1780 6.819397 ACAGAAATACTTAGAAAGGTTGGC 57.181 37.500 0.00 0.00 0.00 4.52
1602 1781 9.280174 TGTTACAGAAATACTTAGAAAGGTTGG 57.720 33.333 0.00 0.00 0.00 3.77
1618 1797 6.971527 TCGAGTTCAAACTTGTTACAGAAA 57.028 33.333 9.42 0.00 39.88 2.52
1675 1858 8.166061 AGCATACATACATGAAATCTATTGGGT 58.834 33.333 0.00 0.00 0.00 4.51
1764 1947 7.601886 CCTGTGACCTCAGATATCATCATTTAC 59.398 40.741 5.32 0.00 37.61 2.01
1767 1950 5.842874 TCCTGTGACCTCAGATATCATCATT 59.157 40.000 5.32 0.00 37.61 2.57
1768 1951 5.400870 TCCTGTGACCTCAGATATCATCAT 58.599 41.667 5.32 0.00 37.61 2.45
1769 1952 4.808042 TCCTGTGACCTCAGATATCATCA 58.192 43.478 5.32 0.00 37.61 3.07
1838 2031 1.517832 GCTGCGTGATAGGTCCACT 59.482 57.895 0.00 0.00 32.64 4.00
1861 2054 5.401531 TCATCTAAACTCTAAACAGCCGT 57.598 39.130 0.00 0.00 0.00 5.68
1893 2086 4.292186 ACATGTTTCTGCTCCATGTACT 57.708 40.909 2.88 0.00 45.36 2.73
1947 2140 6.061022 TCCAAGATGTTTATGCCACTAGAA 57.939 37.500 0.00 0.00 0.00 2.10
2000 2193 2.553602 AGTCGCATTGTGCTTTTCATCA 59.446 40.909 0.10 0.00 42.25 3.07
2036 2229 8.768957 TGTTACTTGATTCTCTTCAGATTCAG 57.231 34.615 0.00 0.00 39.23 3.02
2098 2291 2.165845 ACGAGGGAACAAGGATTCTACG 59.834 50.000 0.00 0.00 0.00 3.51
2202 2395 1.473278 CGGCGACTCTTACTCTCCTTT 59.527 52.381 0.00 0.00 0.00 3.11
2253 2446 1.561643 GAGGTGTCTGGAGGTCATCA 58.438 55.000 0.00 0.00 0.00 3.07
2264 2457 2.114616 GTCATGGATCTGGAGGTGTCT 58.885 52.381 0.00 0.00 0.00 3.41
2265 2458 1.833630 TGTCATGGATCTGGAGGTGTC 59.166 52.381 0.00 0.00 0.00 3.67
2266 2459 1.556911 GTGTCATGGATCTGGAGGTGT 59.443 52.381 0.00 0.00 0.00 4.16
2267 2460 1.556451 TGTGTCATGGATCTGGAGGTG 59.444 52.381 0.00 0.00 0.00 4.00
2268 2461 1.836166 CTGTGTCATGGATCTGGAGGT 59.164 52.381 0.00 0.00 0.00 3.85
2269 2462 1.140452 CCTGTGTCATGGATCTGGAGG 59.860 57.143 0.00 0.00 0.00 4.30
2270 2463 1.140452 CCCTGTGTCATGGATCTGGAG 59.860 57.143 0.00 0.00 0.00 3.86
2271 2464 1.206878 CCCTGTGTCATGGATCTGGA 58.793 55.000 0.00 0.00 0.00 3.86
2272 2465 0.182061 CCCCTGTGTCATGGATCTGG 59.818 60.000 0.00 0.00 0.00 3.86
2273 2466 1.206878 TCCCCTGTGTCATGGATCTG 58.793 55.000 0.00 0.00 0.00 2.90
2321 2514 1.078497 CATGAGGCCCAACACGCTA 60.078 57.895 0.00 0.00 0.00 4.26
2435 2628 1.136110 GCTTTCTCTCCTCTTCTCCGG 59.864 57.143 0.00 0.00 0.00 5.14
2502 2695 3.688126 GCTTCATTCCCCACATCCACATA 60.688 47.826 0.00 0.00 0.00 2.29
2556 2749 6.514012 ACCATACATCCCATTCTCACATAA 57.486 37.500 0.00 0.00 0.00 1.90
2574 2767 2.291282 CCCAAACAGCCACCTAACCATA 60.291 50.000 0.00 0.00 0.00 2.74
2705 3012 5.798125 TGGTCACTGCAAATAAAATTGGA 57.202 34.783 0.00 0.00 0.00 3.53
2796 3103 0.179078 CCAGGCTCAGATGCTCTCAC 60.179 60.000 0.00 0.00 0.00 3.51
2883 3190 6.861065 TGGAACACACAAAGAGAAGAATAC 57.139 37.500 0.00 0.00 0.00 1.89
2925 3232 3.085533 AGTAGCAGAAGTGTCGTGAGAT 58.914 45.455 0.00 0.00 45.19 2.75
3018 3325 5.697082 ATGGGGCACAACAAATTGATTAT 57.303 34.783 0.00 0.00 39.30 1.28
3176 3504 7.538678 GCATTGTAGAAAACTACCAACTTCATG 59.461 37.037 0.00 0.00 0.00 3.07
3177 3505 7.230510 TGCATTGTAGAAAACTACCAACTTCAT 59.769 33.333 0.00 0.00 0.00 2.57
3180 3508 6.952773 TGCATTGTAGAAAACTACCAACTT 57.047 33.333 0.00 0.00 0.00 2.66
3257 3690 4.042311 TGGGAGCTTAAACCACACATAGAA 59.958 41.667 0.00 0.00 0.00 2.10
3259 3692 3.950397 TGGGAGCTTAAACCACACATAG 58.050 45.455 0.00 0.00 0.00 2.23
3281 3714 8.612486 TGACCCTCATATTAAACTAAGGTACA 57.388 34.615 0.00 0.00 0.00 2.90
3284 3717 6.387220 AGCTGACCCTCATATTAAACTAAGGT 59.613 38.462 0.00 0.00 0.00 3.50
3290 3723 4.455606 AGCAGCTGACCCTCATATTAAAC 58.544 43.478 20.43 0.00 0.00 2.01
3410 3843 8.247562 GCAAATTTACTATAAATGTCCACACCA 58.752 33.333 0.00 0.00 0.00 4.17
3560 3997 3.892284 TGGGACAAGAACAAAGTTAGCA 58.108 40.909 0.00 0.00 31.92 3.49
3801 4238 1.806542 CGGACATTGGAGTCAACAAGG 59.193 52.381 0.00 0.00 40.29 3.61
3990 4427 1.476085 CATGGCGCCCAATGTTAAGAA 59.524 47.619 26.77 0.00 36.95 2.52
4008 4445 6.105397 ACAAATGGTTTGAAGATTCAGCAT 57.895 33.333 9.21 0.00 43.26 3.79
4037 4474 6.813152 GGAAAAGCAATAATTTTAGCAGCTCA 59.187 34.615 0.00 0.00 30.22 4.26
4113 4552 5.431420 AGCAAACACGACATAAACATCAA 57.569 34.783 0.00 0.00 0.00 2.57
4125 4564 3.466836 AGATGTCAGAAAGCAAACACGA 58.533 40.909 0.00 0.00 0.00 4.35
4127 4566 4.781071 CAGAGATGTCAGAAAGCAAACAC 58.219 43.478 0.00 0.00 0.00 3.32
4153 4592 8.905702 GCATTAAAATATGAGCCGAATGTTTAG 58.094 33.333 0.00 0.00 0.00 1.85
4270 4712 6.712998 AGCGCTCAAGAAGTATAATCTCTAGA 59.287 38.462 2.64 0.00 0.00 2.43
4283 4725 3.515630 TGTGAATCTAGCGCTCAAGAAG 58.484 45.455 16.34 5.23 0.00 2.85
4304 4746 8.641498 ATTCACAGTATTCCACTTCAATCTTT 57.359 30.769 0.00 0.00 34.26 2.52
4497 5290 1.741706 ACGAGAATGAAGCAAGGCATG 59.258 47.619 0.00 0.00 0.00 4.06
4592 5386 1.262417 AAAAATGGGTTAGGTGCCGG 58.738 50.000 0.00 0.00 0.00 6.13
4636 5430 2.922758 GCAGTTATCGGCGTCCTAGATG 60.923 54.545 6.85 0.00 0.00 2.90
4642 5436 2.171725 GTGGCAGTTATCGGCGTCC 61.172 63.158 6.85 0.00 35.70 4.79
4643 5437 1.447140 TGTGGCAGTTATCGGCGTC 60.447 57.895 6.85 0.00 35.70 5.19
4644 5438 1.740296 GTGTGGCAGTTATCGGCGT 60.740 57.895 6.85 0.00 35.70 5.68
4645 5439 2.798501 CGTGTGGCAGTTATCGGCG 61.799 63.158 0.00 0.00 35.70 6.46
4646 5440 1.421410 CTCGTGTGGCAGTTATCGGC 61.421 60.000 0.00 0.00 0.00 5.54
4647 5441 0.108804 ACTCGTGTGGCAGTTATCGG 60.109 55.000 0.00 0.00 0.00 4.18
4648 5442 0.992072 CACTCGTGTGGCAGTTATCG 59.008 55.000 9.74 0.00 40.33 2.92
4658 5452 1.935873 CCATTAGATGCCACTCGTGTG 59.064 52.381 10.61 10.61 43.45 3.82
4659 5453 1.134401 CCCATTAGATGCCACTCGTGT 60.134 52.381 0.00 0.00 0.00 4.49
4660 5454 1.134401 ACCCATTAGATGCCACTCGTG 60.134 52.381 0.00 0.00 0.00 4.35
4661 5455 1.204146 ACCCATTAGATGCCACTCGT 58.796 50.000 0.00 0.00 0.00 4.18
4662 5456 1.942657 CAACCCATTAGATGCCACTCG 59.057 52.381 0.00 0.00 0.00 4.18
4663 5457 2.684881 CACAACCCATTAGATGCCACTC 59.315 50.000 0.00 0.00 0.00 3.51
4664 5458 2.726821 CACAACCCATTAGATGCCACT 58.273 47.619 0.00 0.00 0.00 4.00
4665 5459 1.134946 GCACAACCCATTAGATGCCAC 59.865 52.381 0.00 0.00 0.00 5.01
4666 5460 1.473258 GCACAACCCATTAGATGCCA 58.527 50.000 0.00 0.00 0.00 4.92
4667 5461 0.746659 GGCACAACCCATTAGATGCC 59.253 55.000 0.00 0.00 45.26 4.40
4668 5462 0.381801 CGGCACAACCCATTAGATGC 59.618 55.000 0.00 0.00 33.26 3.91
4669 5463 0.381801 GCGGCACAACCCATTAGATG 59.618 55.000 0.00 0.00 33.26 2.90
4670 5464 0.034574 TGCGGCACAACCCATTAGAT 60.035 50.000 0.00 0.00 33.26 1.98
4671 5465 0.958382 GTGCGGCACAACCCATTAGA 60.958 55.000 27.10 0.00 34.08 2.10
4672 5466 1.506262 GTGCGGCACAACCCATTAG 59.494 57.895 27.10 0.00 34.08 1.73
4673 5467 2.328856 CGTGCGGCACAACCCATTA 61.329 57.895 30.23 0.00 33.40 1.90
4674 5468 3.669344 CGTGCGGCACAACCCATT 61.669 61.111 30.23 0.00 33.40 3.16
4689 5483 4.969196 CCGTGCCACACAGAGCGT 62.969 66.667 0.00 0.00 33.40 5.07
4690 5484 4.662961 TCCGTGCCACACAGAGCG 62.663 66.667 0.00 0.00 33.40 5.03
4691 5485 2.740055 CTCCGTGCCACACAGAGC 60.740 66.667 0.00 0.00 33.13 4.09
4692 5486 1.373497 GTCTCCGTGCCACACAGAG 60.373 63.158 4.87 4.87 39.46 3.35
4693 5487 2.734591 GTCTCCGTGCCACACAGA 59.265 61.111 0.00 0.00 33.40 3.41
4694 5488 2.734723 CGTCTCCGTGCCACACAG 60.735 66.667 0.00 0.00 33.40 3.66
4695 5489 3.220658 TCGTCTCCGTGCCACACA 61.221 61.111 0.00 0.00 33.40 3.72
4696 5490 2.733593 GTCGTCTCCGTGCCACAC 60.734 66.667 0.00 0.00 35.01 3.82
4697 5491 3.986006 GGTCGTCTCCGTGCCACA 61.986 66.667 0.00 0.00 35.01 4.17
4698 5492 4.736896 GGGTCGTCTCCGTGCCAC 62.737 72.222 0.00 0.00 33.92 5.01
4737 5531 3.360340 GGCTATGGCTGGATGCGC 61.360 66.667 0.00 0.00 44.05 6.09
4738 5532 2.670934 GGGCTATGGCTGGATGCG 60.671 66.667 0.00 0.00 44.05 4.73
4739 5533 2.670934 CGGGCTATGGCTGGATGC 60.671 66.667 0.00 0.00 41.94 3.91
4740 5534 2.670934 GCGGGCTATGGCTGGATG 60.671 66.667 0.00 0.00 38.73 3.51
4741 5535 3.170672 TGCGGGCTATGGCTGGAT 61.171 61.111 0.00 0.00 38.73 3.41
4742 5536 4.175337 GTGCGGGCTATGGCTGGA 62.175 66.667 0.00 0.00 38.73 3.86
4744 5538 4.838152 ACGTGCGGGCTATGGCTG 62.838 66.667 0.00 0.00 38.73 4.85
4745 5539 4.530857 GACGTGCGGGCTATGGCT 62.531 66.667 0.00 0.00 38.73 4.75
4758 5552 4.903010 GTGCCACACACCGGACGT 62.903 66.667 9.46 0.78 44.02 4.34
4772 5566 3.308878 GACGTGTGGGCGATTGTGC 62.309 63.158 0.00 0.00 35.59 4.57
4773 5567 1.667830 AGACGTGTGGGCGATTGTG 60.668 57.895 0.00 0.00 35.59 3.33
4774 5568 1.667830 CAGACGTGTGGGCGATTGT 60.668 57.895 4.46 0.00 35.59 2.71
4775 5569 2.390599 CCAGACGTGTGGGCGATTG 61.391 63.158 23.61 0.00 33.46 2.67
4776 5570 2.047274 CCAGACGTGTGGGCGATT 60.047 61.111 23.61 0.00 33.46 3.34
4782 5576 2.509336 GATCGCCCAGACGTGTGG 60.509 66.667 24.31 24.31 37.34 4.17
4783 5577 2.880879 CGATCGCCCAGACGTGTG 60.881 66.667 5.57 5.57 0.00 3.82
4784 5578 3.052620 CTCGATCGCCCAGACGTGT 62.053 63.158 11.09 0.00 0.00 4.49
4785 5579 2.278206 CTCGATCGCCCAGACGTG 60.278 66.667 11.09 0.00 0.00 4.49
4786 5580 4.194720 GCTCGATCGCCCAGACGT 62.195 66.667 11.09 0.00 0.00 4.34
4834 5628 2.666098 TTAGAAGGCAGGCCGGGAC 61.666 63.158 2.18 0.00 41.95 4.46
4835 5629 2.285069 TTAGAAGGCAGGCCGGGA 60.285 61.111 2.18 0.00 41.95 5.14
4836 5630 2.124695 GTTAGAAGGCAGGCCGGG 60.125 66.667 2.18 0.00 41.95 5.73
4837 5631 2.124695 GGTTAGAAGGCAGGCCGG 60.125 66.667 4.37 0.00 41.95 6.13
4838 5632 2.124695 GGGTTAGAAGGCAGGCCG 60.125 66.667 4.37 0.00 41.95 6.13
4839 5633 1.937924 ATGGGGTTAGAAGGCAGGCC 61.938 60.000 0.97 0.97 0.00 5.19
4840 5634 0.033109 AATGGGGTTAGAAGGCAGGC 60.033 55.000 0.00 0.00 0.00 4.85
4841 5635 1.410224 GGAATGGGGTTAGAAGGCAGG 60.410 57.143 0.00 0.00 0.00 4.85
4842 5636 1.747206 CGGAATGGGGTTAGAAGGCAG 60.747 57.143 0.00 0.00 0.00 4.85
4843 5637 0.254747 CGGAATGGGGTTAGAAGGCA 59.745 55.000 0.00 0.00 0.00 4.75
4844 5638 1.101635 GCGGAATGGGGTTAGAAGGC 61.102 60.000 0.00 0.00 0.00 4.35
4845 5639 0.465642 GGCGGAATGGGGTTAGAAGG 60.466 60.000 0.00 0.00 0.00 3.46
4846 5640 0.465642 GGGCGGAATGGGGTTAGAAG 60.466 60.000 0.00 0.00 0.00 2.85
4847 5641 0.917333 AGGGCGGAATGGGGTTAGAA 60.917 55.000 0.00 0.00 0.00 2.10
4848 5642 1.307517 AGGGCGGAATGGGGTTAGA 60.308 57.895 0.00 0.00 0.00 2.10
4849 5643 1.152963 CAGGGCGGAATGGGGTTAG 60.153 63.158 0.00 0.00 0.00 2.34
4850 5644 1.917336 GACAGGGCGGAATGGGGTTA 61.917 60.000 0.00 0.00 0.00 2.85
4851 5645 3.264845 ACAGGGCGGAATGGGGTT 61.265 61.111 0.00 0.00 0.00 4.11
4852 5646 3.728373 GACAGGGCGGAATGGGGT 61.728 66.667 0.00 0.00 0.00 4.95
4853 5647 4.856801 CGACAGGGCGGAATGGGG 62.857 72.222 0.00 0.00 0.00 4.96
4863 5657 4.477975 GAGACGACGGCGACAGGG 62.478 72.222 22.49 0.00 41.64 4.45
4864 5658 4.477975 GGAGACGACGGCGACAGG 62.478 72.222 22.49 1.37 41.64 4.00
4865 5659 2.104859 TAGGAGACGACGGCGACAG 61.105 63.158 22.49 6.69 41.64 3.51
4866 5660 2.046988 TAGGAGACGACGGCGACA 60.047 61.111 22.49 0.00 41.64 4.35
4867 5661 2.402787 GTAGGAGACGACGGCGAC 59.597 66.667 22.49 13.05 41.64 5.19
4868 5662 2.821366 GGTAGGAGACGACGGCGA 60.821 66.667 22.49 0.00 41.64 5.54
4869 5663 2.821688 GAGGTAGGAGACGACGGCG 61.822 68.421 10.39 10.39 44.79 6.46
4870 5664 1.438562 GAGAGGTAGGAGACGACGGC 61.439 65.000 0.00 0.00 36.74 5.68
4871 5665 1.152989 CGAGAGGTAGGAGACGACGG 61.153 65.000 0.00 0.00 36.74 4.79
4872 5666 0.179116 TCGAGAGGTAGGAGACGACG 60.179 60.000 0.00 0.00 36.74 5.12
4873 5667 2.137523 GATCGAGAGGTAGGAGACGAC 58.862 57.143 0.00 0.00 34.90 4.34
4874 5668 2.036217 GAGATCGAGAGGTAGGAGACGA 59.964 54.545 0.00 0.00 0.00 4.20
4875 5669 2.409975 GAGATCGAGAGGTAGGAGACG 58.590 57.143 0.00 0.00 0.00 4.18
4876 5670 2.370849 AGGAGATCGAGAGGTAGGAGAC 59.629 54.545 0.00 0.00 0.00 3.36
4877 5671 2.696775 AGGAGATCGAGAGGTAGGAGA 58.303 52.381 0.00 0.00 0.00 3.71
4878 5672 3.307199 GGTAGGAGATCGAGAGGTAGGAG 60.307 56.522 0.00 0.00 0.00 3.69
4879 5673 2.638855 GGTAGGAGATCGAGAGGTAGGA 59.361 54.545 0.00 0.00 0.00 2.94
4880 5674 2.640826 AGGTAGGAGATCGAGAGGTAGG 59.359 54.545 0.00 0.00 0.00 3.18
4881 5675 4.202377 TGAAGGTAGGAGATCGAGAGGTAG 60.202 50.000 0.00 0.00 0.00 3.18
4882 5676 3.715315 TGAAGGTAGGAGATCGAGAGGTA 59.285 47.826 0.00 0.00 0.00 3.08
4883 5677 2.510382 TGAAGGTAGGAGATCGAGAGGT 59.490 50.000 0.00 0.00 0.00 3.85
4884 5678 3.216187 TGAAGGTAGGAGATCGAGAGG 57.784 52.381 0.00 0.00 0.00 3.69
4885 5679 3.435327 CGATGAAGGTAGGAGATCGAGAG 59.565 52.174 0.00 0.00 38.53 3.20
4886 5680 3.181453 ACGATGAAGGTAGGAGATCGAGA 60.181 47.826 0.00 0.00 38.53 4.04
4887 5681 3.142951 ACGATGAAGGTAGGAGATCGAG 58.857 50.000 0.00 0.00 38.53 4.04
4888 5682 3.139850 GACGATGAAGGTAGGAGATCGA 58.860 50.000 0.00 0.00 38.53 3.59
4889 5683 3.142951 AGACGATGAAGGTAGGAGATCG 58.857 50.000 0.00 0.00 41.29 3.69
4890 5684 5.300792 AGAAAGACGATGAAGGTAGGAGATC 59.699 44.000 0.00 0.00 0.00 2.75
4891 5685 5.205056 AGAAAGACGATGAAGGTAGGAGAT 58.795 41.667 0.00 0.00 0.00 2.75
4892 5686 4.601084 AGAAAGACGATGAAGGTAGGAGA 58.399 43.478 0.00 0.00 0.00 3.71
4893 5687 4.993029 AGAAAGACGATGAAGGTAGGAG 57.007 45.455 0.00 0.00 0.00 3.69
4894 5688 5.017490 AGAAGAAAGACGATGAAGGTAGGA 58.983 41.667 0.00 0.00 0.00 2.94
4895 5689 5.126384 AGAGAAGAAAGACGATGAAGGTAGG 59.874 44.000 0.00 0.00 0.00 3.18
4896 5690 6.033341 CAGAGAAGAAAGACGATGAAGGTAG 58.967 44.000 0.00 0.00 0.00 3.18
4897 5691 5.105716 CCAGAGAAGAAAGACGATGAAGGTA 60.106 44.000 0.00 0.00 0.00 3.08
4898 5692 4.322349 CCAGAGAAGAAAGACGATGAAGGT 60.322 45.833 0.00 0.00 0.00 3.50
4899 5693 4.180057 CCAGAGAAGAAAGACGATGAAGG 58.820 47.826 0.00 0.00 0.00 3.46
4900 5694 4.815269 ACCAGAGAAGAAAGACGATGAAG 58.185 43.478 0.00 0.00 0.00 3.02
4901 5695 4.873746 ACCAGAGAAGAAAGACGATGAA 57.126 40.909 0.00 0.00 0.00 2.57
4902 5696 4.560128 CAACCAGAGAAGAAAGACGATGA 58.440 43.478 0.00 0.00 0.00 2.92
4903 5697 3.124297 GCAACCAGAGAAGAAAGACGATG 59.876 47.826 0.00 0.00 0.00 3.84
4904 5698 3.330267 GCAACCAGAGAAGAAAGACGAT 58.670 45.455 0.00 0.00 0.00 3.73
4905 5699 2.548067 GGCAACCAGAGAAGAAAGACGA 60.548 50.000 0.00 0.00 0.00 4.20
4906 5700 1.801178 GGCAACCAGAGAAGAAAGACG 59.199 52.381 0.00 0.00 0.00 4.18
4907 5701 2.851195 TGGCAACCAGAGAAGAAAGAC 58.149 47.619 0.00 0.00 0.00 3.01
4908 5702 3.415212 CATGGCAACCAGAGAAGAAAGA 58.585 45.455 0.00 0.00 36.75 2.52
4909 5703 2.490903 CCATGGCAACCAGAGAAGAAAG 59.509 50.000 0.00 0.00 36.75 2.62
4910 5704 2.517959 CCATGGCAACCAGAGAAGAAA 58.482 47.619 0.00 0.00 36.75 2.52
4911 5705 1.887956 GCCATGGCAACCAGAGAAGAA 60.888 52.381 32.08 0.00 36.75 2.52
4912 5706 0.322816 GCCATGGCAACCAGAGAAGA 60.323 55.000 32.08 0.00 36.75 2.87
4913 5707 2.187073 GCCATGGCAACCAGAGAAG 58.813 57.895 32.08 0.00 36.75 2.85
4914 5708 4.421365 GCCATGGCAACCAGAGAA 57.579 55.556 32.08 0.00 36.75 2.87
4924 5718 2.283101 TGGTCTGGTTGCCATGGC 60.283 61.111 30.54 30.54 42.35 4.40
4925 5719 0.033796 ATCTGGTCTGGTTGCCATGG 60.034 55.000 7.63 7.63 33.84 3.66
4926 5720 1.064906 AGATCTGGTCTGGTTGCCATG 60.065 52.381 0.00 0.00 35.31 3.66
4927 5721 1.211457 GAGATCTGGTCTGGTTGCCAT 59.789 52.381 0.00 0.00 37.29 4.40
4928 5722 0.615331 GAGATCTGGTCTGGTTGCCA 59.385 55.000 0.00 0.00 37.29 4.92
4929 5723 0.908198 AGAGATCTGGTCTGGTTGCC 59.092 55.000 0.00 0.00 37.29 4.52
4930 5724 2.482839 GCTAGAGATCTGGTCTGGTTGC 60.483 54.545 0.00 0.00 37.29 4.17
4931 5725 2.223688 CGCTAGAGATCTGGTCTGGTTG 60.224 54.545 0.00 0.00 37.29 3.77
4932 5726 2.028130 CGCTAGAGATCTGGTCTGGTT 58.972 52.381 0.00 0.00 37.29 3.67
4933 5727 1.686355 CGCTAGAGATCTGGTCTGGT 58.314 55.000 0.00 0.00 37.29 4.00
4934 5728 0.313672 GCGCTAGAGATCTGGTCTGG 59.686 60.000 0.00 0.00 37.29 3.86
4935 5729 0.313672 GGCGCTAGAGATCTGGTCTG 59.686 60.000 7.64 0.00 37.29 3.51
4936 5730 0.184933 AGGCGCTAGAGATCTGGTCT 59.815 55.000 7.64 0.00 40.81 3.85
4937 5731 0.596082 GAGGCGCTAGAGATCTGGTC 59.404 60.000 7.64 0.00 0.00 4.02
4938 5732 0.825840 GGAGGCGCTAGAGATCTGGT 60.826 60.000 7.64 0.00 0.00 4.00
4939 5733 1.531739 GGGAGGCGCTAGAGATCTGG 61.532 65.000 7.64 0.00 0.00 3.86
4940 5734 1.531739 GGGGAGGCGCTAGAGATCTG 61.532 65.000 7.64 0.00 0.00 2.90
4941 5735 1.228737 GGGGAGGCGCTAGAGATCT 60.229 63.158 7.64 0.00 0.00 2.75
4942 5736 0.902516 ATGGGGAGGCGCTAGAGATC 60.903 60.000 7.64 0.00 0.00 2.75
4943 5737 0.902516 GATGGGGAGGCGCTAGAGAT 60.903 60.000 7.64 0.00 0.00 2.75
4944 5738 1.531840 GATGGGGAGGCGCTAGAGA 60.532 63.158 7.64 0.00 0.00 3.10
4945 5739 2.578714 GGATGGGGAGGCGCTAGAG 61.579 68.421 7.64 0.00 0.00 2.43
4946 5740 2.524394 GGATGGGGAGGCGCTAGA 60.524 66.667 7.64 0.00 0.00 2.43
4947 5741 3.631046 GGGATGGGGAGGCGCTAG 61.631 72.222 7.64 0.00 0.00 3.42
4952 5746 3.584403 GATGGGGGATGGGGAGGC 61.584 72.222 0.00 0.00 0.00 4.70
4953 5747 2.860971 GGATGGGGGATGGGGAGG 60.861 72.222 0.00 0.00 0.00 4.30
4954 5748 2.860971 GGGATGGGGGATGGGGAG 60.861 72.222 0.00 0.00 0.00 4.30
4955 5749 4.549741 GGGGATGGGGGATGGGGA 62.550 72.222 0.00 0.00 0.00 4.81
4956 5750 4.881381 TGGGGATGGGGGATGGGG 62.881 72.222 0.00 0.00 0.00 4.96
4957 5751 3.511610 GTGGGGATGGGGGATGGG 61.512 72.222 0.00 0.00 0.00 4.00
4958 5752 3.511610 GGTGGGGATGGGGGATGG 61.512 72.222 0.00 0.00 0.00 3.51
4959 5753 3.889692 CGGTGGGGATGGGGGATG 61.890 72.222 0.00 0.00 0.00 3.51
4982 5776 4.467084 CATCGTCGTGGGGGTGGG 62.467 72.222 0.00 0.00 0.00 4.61
4983 5777 3.371097 CTCATCGTCGTGGGGGTGG 62.371 68.421 0.00 0.00 0.00 4.61
4984 5778 2.184322 CTCATCGTCGTGGGGGTG 59.816 66.667 0.00 0.00 0.00 4.61
4985 5779 2.849096 TAGCTCATCGTCGTGGGGGT 62.849 60.000 0.00 0.00 0.00 4.95
4986 5780 1.672854 TTAGCTCATCGTCGTGGGGG 61.673 60.000 0.00 0.00 0.00 5.40
4987 5781 0.527817 GTTAGCTCATCGTCGTGGGG 60.528 60.000 0.00 0.00 0.00 4.96
4988 5782 0.172578 TGTTAGCTCATCGTCGTGGG 59.827 55.000 0.00 0.00 0.00 4.61
4989 5783 1.550065 CTGTTAGCTCATCGTCGTGG 58.450 55.000 0.00 0.00 0.00 4.94
4990 5784 1.135373 ACCTGTTAGCTCATCGTCGTG 60.135 52.381 0.00 0.00 0.00 4.35
4991 5785 1.132643 GACCTGTTAGCTCATCGTCGT 59.867 52.381 0.00 0.00 0.00 4.34
4992 5786 1.828832 GACCTGTTAGCTCATCGTCG 58.171 55.000 0.00 0.00 0.00 5.12
4993 5787 1.400846 TCGACCTGTTAGCTCATCGTC 59.599 52.381 0.00 0.00 0.00 4.20
4994 5788 1.460504 TCGACCTGTTAGCTCATCGT 58.539 50.000 0.00 0.00 0.00 3.73
4995 5789 2.292016 AGATCGACCTGTTAGCTCATCG 59.708 50.000 0.00 0.00 0.00 3.84
4996 5790 4.295051 GAAGATCGACCTGTTAGCTCATC 58.705 47.826 0.00 0.00 0.00 2.92
4997 5791 3.243234 CGAAGATCGACCTGTTAGCTCAT 60.243 47.826 0.00 0.00 43.74 2.90
4998 5792 2.097629 CGAAGATCGACCTGTTAGCTCA 59.902 50.000 0.00 0.00 43.74 4.26
4999 5793 2.355132 TCGAAGATCGACCTGTTAGCTC 59.645 50.000 0.00 0.00 44.82 4.09
5000 5794 2.366533 TCGAAGATCGACCTGTTAGCT 58.633 47.619 0.00 0.00 44.82 3.32
5001 5795 2.846039 TCGAAGATCGACCTGTTAGC 57.154 50.000 0.00 0.00 44.82 3.09
5011 5805 4.286910 GAGAAACAGGAGATCGAAGATCG 58.713 47.826 4.60 0.00 45.12 3.69
5012 5806 4.286910 CGAGAAACAGGAGATCGAAGATC 58.713 47.826 2.02 2.02 45.12 2.75
5013 5807 4.300189 CGAGAAACAGGAGATCGAAGAT 57.700 45.455 0.00 0.00 45.12 2.40
5014 5808 3.766676 CGAGAAACAGGAGATCGAAGA 57.233 47.619 0.00 0.00 45.75 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.