Multiple sequence alignment - TraesCS3B01G220600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G220600 chr3B 100.000 4858 0 0 1 4858 270886021 270890878 0.000000e+00 8972.0
1 TraesCS3B01G220600 chr3B 89.925 268 23 4 459 723 367490682 367490948 4.660000e-90 342.0
2 TraesCS3B01G220600 chr3A 94.156 3525 109 36 1234 4676 241927045 241923536 0.000000e+00 5278.0
3 TraesCS3B01G220600 chr3A 95.793 523 21 1 726 1247 241927585 241927063 0.000000e+00 843.0
4 TraesCS3B01G220600 chr3A 82.840 169 20 7 288 453 241927784 241927622 5.070000e-30 143.0
5 TraesCS3B01G220600 chr3A 79.545 88 13 4 4320 4404 12842332 12842417 1.890000e-04 58.4
6 TraesCS3B01G220600 chr3D 95.780 3199 84 21 1234 4404 188354768 188357943 0.000000e+00 5112.0
7 TraesCS3B01G220600 chr3D 94.877 527 22 4 725 1247 188354225 188354750 0.000000e+00 819.0
8 TraesCS3B01G220600 chr3D 94.158 291 16 1 1 291 188351938 188352227 4.460000e-120 442.0
9 TraesCS3B01G220600 chr3D 90.189 265 21 5 461 722 18703267 18703005 1.670000e-89 340.0
10 TraesCS3B01G220600 chr3D 93.000 200 12 2 1 200 197105072 197104875 1.710000e-74 291.0
11 TraesCS3B01G220600 chr3D 93.264 193 12 1 1 193 91634352 91634543 2.860000e-72 283.0
12 TraesCS3B01G220600 chr3D 92.347 196 14 1 1 196 200320148 200319954 1.330000e-70 278.0
13 TraesCS3B01G220600 chr3D 92.746 193 13 1 1 193 326280320 326280129 1.330000e-70 278.0
14 TraesCS3B01G220600 chr3D 92.517 147 9 2 288 433 188352316 188352461 4.930000e-50 209.0
15 TraesCS3B01G220600 chr3D 91.228 57 5 0 4684 4740 543933596 543933652 1.450000e-10 78.7
16 TraesCS3B01G220600 chr7B 91.045 268 17 7 459 721 663837898 663837633 5.980000e-94 355.0
17 TraesCS3B01G220600 chr7B 90.226 266 20 6 459 720 387641617 387641880 4.660000e-90 342.0
18 TraesCS3B01G220600 chr7B 96.429 84 3 0 4775 4858 536260640 536260557 6.560000e-29 139.0
19 TraesCS3B01G220600 chr2B 90.146 274 22 5 461 731 627873457 627873728 7.740000e-93 351.0
20 TraesCS3B01G220600 chr5B 90.566 265 19 6 459 718 618270122 618269859 3.600000e-91 346.0
21 TraesCS3B01G220600 chr5B 98.810 84 0 1 4773 4856 13718698 13718616 1.090000e-31 148.0
22 TraesCS3B01G220600 chr1D 90.602 266 18 7 459 720 454151604 454151866 3.600000e-91 346.0
23 TraesCS3B01G220600 chr1D 98.701 77 1 0 4782 4858 192809918 192809994 2.360000e-28 137.0
24 TraesCS3B01G220600 chr1D 97.468 79 2 0 4780 4858 47310446 47310368 8.480000e-28 135.0
25 TraesCS3B01G220600 chr1D 87.302 63 8 0 4673 4735 297389856 297389794 6.740000e-09 73.1
26 TraesCS3B01G220600 chr1D 92.000 50 4 0 4684 4733 174151220 174151171 2.430000e-08 71.3
27 TraesCS3B01G220600 chr1D 88.525 61 4 2 4673 4730 201373414 201373354 2.430000e-08 71.3
28 TraesCS3B01G220600 chr1D 88.710 62 2 5 4673 4730 398734112 398734052 2.430000e-08 71.3
29 TraesCS3B01G220600 chr5A 90.262 267 21 5 459 721 64980775 64980510 1.290000e-90 344.0
30 TraesCS3B01G220600 chr5A 98.750 80 1 0 4779 4858 512022297 512022376 5.070000e-30 143.0
31 TraesCS3B01G220600 chr5A 97.590 83 2 0 4776 4858 546827616 546827534 5.070000e-30 143.0
32 TraesCS3B01G220600 chr2D 90.189 265 22 4 459 720 618294514 618294777 4.660000e-90 342.0
33 TraesCS3B01G220600 chr2D 92.746 193 13 1 1 193 239791651 239791460 1.330000e-70 278.0
34 TraesCS3B01G220600 chr2D 92.347 196 14 1 1 196 289110675 289110481 1.330000e-70 278.0
35 TraesCS3B01G220600 chr2D 90.164 61 3 2 4673 4730 216720369 216720429 5.210000e-10 76.8
36 TraesCS3B01G220600 chr2D 92.453 53 4 0 4685 4737 613097062 613097114 5.210000e-10 76.8
37 TraesCS3B01G220600 chr2D 88.710 62 4 2 4673 4731 262479702 262479763 6.740000e-09 73.1
38 TraesCS3B01G220600 chr2D 100.000 31 0 0 4374 4404 560858941 560858911 1.890000e-04 58.4
39 TraesCS3B01G220600 chr6A 92.857 196 13 1 1 196 168146538 168146732 2.860000e-72 283.0
40 TraesCS3B01G220600 chr6A 90.164 61 4 1 4672 4730 614385619 614385559 1.450000e-10 78.7
41 TraesCS3B01G220600 chr6A 91.071 56 3 2 4684 4738 12423624 12423678 1.880000e-09 75.0
42 TraesCS3B01G220600 chr6A 100.000 31 0 0 4374 4404 81122104 81122074 1.890000e-04 58.4
43 TraesCS3B01G220600 chr4D 91.878 197 15 1 1 197 293495630 293495435 1.720000e-69 274.0
44 TraesCS3B01G220600 chr4D 96.429 84 2 1 4776 4858 164649548 164649465 2.360000e-28 137.0
45 TraesCS3B01G220600 chr4D 96.000 75 3 0 4782 4856 207559559 207559485 6.600000e-24 122.0
46 TraesCS3B01G220600 chr4D 88.710 62 6 1 4670 4730 509129526 509129587 1.880000e-09 75.0
47 TraesCS3B01G220600 chr4D 88.525 61 4 2 4673 4730 363958061 363958121 2.430000e-08 71.3
48 TraesCS3B01G220600 chr4D 87.097 62 5 2 4673 4731 89229961 89230022 3.140000e-07 67.6
49 TraesCS3B01G220600 chr7D 98.750 80 1 0 4779 4858 264138458 264138537 5.070000e-30 143.0
50 TraesCS3B01G220600 chr7D 96.552 87 2 1 4772 4858 542092362 542092277 5.070000e-30 143.0
51 TraesCS3B01G220600 chr7D 97.531 81 2 0 4778 4858 2524326 2524406 6.560000e-29 139.0
52 TraesCS3B01G220600 chr7D 98.718 78 1 0 4781 4858 234804179 234804102 6.560000e-29 139.0
53 TraesCS3B01G220600 chr7D 91.379 58 3 2 4684 4740 416240151 416240207 1.450000e-10 78.7
54 TraesCS3B01G220600 chr7D 94.118 51 2 1 4684 4733 7471619 7471669 5.210000e-10 76.8
55 TraesCS3B01G220600 chr7D 89.474 57 6 0 4684 4740 27819518 27819574 6.740000e-09 73.1
56 TraesCS3B01G220600 chr7D 85.915 71 7 3 4664 4731 220975715 220975785 6.740000e-09 73.1
57 TraesCS3B01G220600 chr4B 98.750 80 1 0 4779 4858 50445591 50445512 5.070000e-30 143.0
58 TraesCS3B01G220600 chr4B 96.429 84 3 0 4775 4858 140924647 140924564 6.560000e-29 139.0
59 TraesCS3B01G220600 chr2A 96.512 86 2 1 4773 4858 98882824 98882740 1.820000e-29 141.0
60 TraesCS3B01G220600 chr2A 91.379 58 5 0 4684 4741 596428970 596429027 4.030000e-11 80.5
61 TraesCS3B01G220600 chr2A 88.889 63 5 1 4673 4735 352991983 352992043 5.210000e-10 76.8
62 TraesCS3B01G220600 chr2A 79.439 107 18 2 4300 4404 42481301 42481197 6.740000e-09 73.1
63 TraesCS3B01G220600 chr2A 79.630 108 17 3 4300 4404 735377899 735378004 6.740000e-09 73.1
64 TraesCS3B01G220600 chrUn 98.701 77 1 0 4782 4858 37289250 37289174 2.360000e-28 137.0
65 TraesCS3B01G220600 chrUn 98.701 77 1 0 4782 4858 37292426 37292350 2.360000e-28 137.0
66 TraesCS3B01G220600 chrUn 97.531 81 1 1 4779 4858 279936304 279936224 2.360000e-28 137.0
67 TraesCS3B01G220600 chrUn 97.531 81 1 1 4779 4858 395541691 395541611 2.360000e-28 137.0
68 TraesCS3B01G220600 chrUn 96.250 80 3 0 4779 4858 278447615 278447694 1.100000e-26 132.0
69 TraesCS3B01G220600 chrUn 96.250 80 3 0 4779 4858 281845689 281845768 1.100000e-26 132.0
70 TraesCS3B01G220600 chrUn 97.403 77 2 0 4782 4858 289138431 289138355 1.100000e-26 132.0
71 TraesCS3B01G220600 chrUn 97.403 77 2 0 4782 4858 332242460 332242536 1.100000e-26 132.0
72 TraesCS3B01G220600 chrUn 95.122 82 4 0 4777 4858 42362359 42362440 3.950000e-26 130.0
73 TraesCS3B01G220600 chrUn 93.023 86 6 0 4773 4858 17014230 17014145 5.100000e-25 126.0
74 TraesCS3B01G220600 chrUn 93.976 83 5 0 4771 4853 40599746 40599828 5.100000e-25 126.0
75 TraesCS3B01G220600 chrUn 91.071 56 3 2 4684 4738 319987257 319987311 1.880000e-09 75.0
76 TraesCS3B01G220600 chrUn 92.308 52 2 2 4684 4734 84099583 84099533 6.740000e-09 73.1
77 TraesCS3B01G220600 chrUn 93.617 47 3 0 4684 4730 1181972 1181926 2.430000e-08 71.3
78 TraesCS3B01G220600 chrUn 89.091 55 6 0 4684 4738 37289211 37289157 8.720000e-08 69.4
79 TraesCS3B01G220600 chrUn 89.091 55 6 0 4684 4738 37292387 37292333 8.720000e-08 69.4
80 TraesCS3B01G220600 chrUn 91.667 48 4 0 4684 4731 35713295 35713342 3.140000e-07 67.6
81 TraesCS3B01G220600 chrUn 91.837 49 2 2 4684 4731 48472348 48472395 3.140000e-07 67.6
82 TraesCS3B01G220600 chrUn 91.837 49 2 2 4684 4731 235114449 235114496 3.140000e-07 67.6
83 TraesCS3B01G220600 chrUn 91.667 48 4 0 4684 4731 305213178 305213131 3.140000e-07 67.6
84 TraesCS3B01G220600 chrUn 91.667 48 4 0 4684 4731 320245644 320245691 3.140000e-07 67.6
85 TraesCS3B01G220600 chr6D 98.701 77 1 0 4782 4858 350223147 350223071 2.360000e-28 137.0
86 TraesCS3B01G220600 chr6D 93.182 88 4 2 4773 4858 155146769 155146856 1.420000e-25 128.0
87 TraesCS3B01G220600 chr6D 94.118 85 4 1 4774 4858 417684758 417684841 1.420000e-25 128.0
88 TraesCS3B01G220600 chr6D 89.831 59 6 0 4684 4742 372879485 372879543 5.210000e-10 76.8
89 TraesCS3B01G220600 chr6D 88.889 63 5 2 4684 4746 377870859 377870919 5.210000e-10 76.8
90 TraesCS3B01G220600 chr6D 89.091 55 4 2 4684 4736 160314831 160314777 3.140000e-07 67.6
91 TraesCS3B01G220600 chr6D 91.667 48 4 0 4684 4731 411828843 411828890 3.140000e-07 67.6
92 TraesCS3B01G220600 chr6D 86.885 61 5 2 4673 4730 135152492 135152432 1.130000e-06 65.8
93 TraesCS3B01G220600 chr6B 95.402 87 3 1 4772 4858 145574143 145574228 2.360000e-28 137.0
94 TraesCS3B01G220600 chr6B 84.416 77 10 2 4684 4758 609097579 609097655 1.880000e-09 75.0
95 TraesCS3B01G220600 chr5D 98.701 77 1 0 4782 4858 491871671 491871595 2.360000e-28 137.0
96 TraesCS3B01G220600 chr5D 94.318 88 4 1 4771 4858 218760937 218761023 3.050000e-27 134.0
97 TraesCS3B01G220600 chr5D 88.525 61 4 2 4673 4730 340640339 340640279 2.430000e-08 71.3
98 TraesCS3B01G220600 chr5D 88.333 60 6 1 4684 4742 547431589 547431530 2.430000e-08 71.3
99 TraesCS3B01G220600 chr1B 96.429 84 2 1 4775 4858 149606575 149606493 2.360000e-28 137.0
100 TraesCS3B01G220600 chr4A 82.222 90 9 5 4319 4404 151317941 151317855 2.430000e-08 71.3
101 TraesCS3B01G220600 chr7A 100.000 31 0 0 4374 4404 115794910 115794880 1.890000e-04 58.4
102 TraesCS3B01G220600 chr7A 100.000 31 0 0 4374 4404 487261804 487261774 1.890000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G220600 chr3B 270886021 270890878 4857 False 8972.0 8972 100.000000 1 4858 1 chr3B.!!$F1 4857
1 TraesCS3B01G220600 chr3A 241923536 241927784 4248 True 2088.0 5278 90.929667 288 4676 3 chr3A.!!$R1 4388
2 TraesCS3B01G220600 chr3D 188351938 188357943 6005 False 1645.5 5112 94.333000 1 4404 4 chr3D.!!$F3 4403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
495 2305 0.034186 TTCAAATCCTGGGCTCGCAT 60.034 50.000 0.00 0.00 0.00 4.73 F
496 2306 0.034186 TCAAATCCTGGGCTCGCATT 60.034 50.000 0.00 0.00 0.00 3.56 F
648 2458 0.101219 TCATCGAGATGAGGTGTGCG 59.899 55.000 11.37 0.00 42.42 5.34 F
649 2459 0.179127 CATCGAGATGAGGTGTGCGT 60.179 55.000 7.26 0.00 41.20 5.24 F
706 2516 0.319555 TGAGCGCTTGTGTCTGTACC 60.320 55.000 13.26 0.00 0.00 3.34 F
710 2520 0.596600 CGCTTGTGTCTGTACCGTGT 60.597 55.000 0.00 0.00 0.00 4.49 F
854 2665 0.620700 TAGGTTTCCCTCTCCCAGCC 60.621 60.000 0.00 0.00 41.45 4.85 F
1679 3532 1.461127 GCAAGCCTTGACGTACTTCTG 59.539 52.381 9.04 0.00 0.00 3.02 F
3110 4970 1.094785 ACATATTTGCTGGTCACCGC 58.905 50.000 3.94 3.94 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1524 3377 0.610174 TAGTCCTGAGCAAGGCAGTG 59.390 55.000 0.57 0.00 46.92 3.66 R
1721 3574 0.877071 AGCAACACGATTTCTGGCAG 59.123 50.000 8.58 8.58 0.00 4.85 R
1823 3676 0.950836 TGTCACCAGAATTTGCACCG 59.049 50.000 0.00 0.00 0.00 4.94 R
1983 3836 1.064017 TGGCTCCTTGTCAGGTTTTGT 60.064 47.619 0.00 0.00 41.69 2.83 R
2592 4452 2.350522 CAGGAGCTGCGTAAAAGTGAT 58.649 47.619 0.00 0.00 0.00 3.06 R
2645 4505 3.448686 CGAAGCATAATCACGTTCTCCT 58.551 45.455 0.00 0.00 0.00 3.69 R
2927 4787 5.602145 TGGTTTCACATTCTCCTTTTCCATT 59.398 36.000 0.00 0.00 0.00 3.16 R
3716 5576 0.167470 CAGGAGTCTTTGCATGCACG 59.833 55.000 22.58 14.84 0.00 5.34 R
4751 6697 0.324614 GGAATTTTGCCTTGGGGGTG 59.675 55.000 0.00 0.00 37.43 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.880054 ACCTTAACCATCTTTGATGAACG 57.120 39.130 8.91 0.00 0.00 3.95
59 60 0.745468 GAGGCTTACTAGGGGACACG 59.255 60.000 0.00 0.00 0.00 4.49
62 63 1.686115 GGCTTACTAGGGGACACGGTA 60.686 57.143 0.00 0.00 0.00 4.02
70 71 4.889995 ACTAGGGGACACGGTATAGTTTAC 59.110 45.833 0.00 0.00 0.00 2.01
80 81 6.747280 ACACGGTATAGTTTACGTATTCACAC 59.253 38.462 0.00 0.00 37.85 3.82
194 195 3.403038 CTCTAGGGCATATTTCCAACCG 58.597 50.000 0.00 0.00 0.00 4.44
212 213 2.643801 ACCGTTGGTTGGTTAGGGATTA 59.356 45.455 0.00 0.00 35.82 1.75
236 237 1.065709 AGAGAGAGAGACGAGGGTGAC 60.066 57.143 0.00 0.00 0.00 3.67
255 256 2.835895 GAGACGAGGAGGGAGGCC 60.836 72.222 0.00 0.00 0.00 5.19
264 265 4.974438 AGGGAGGCCACGGGACAA 62.974 66.667 5.01 0.00 29.21 3.18
308 401 4.555709 TGCCAAACCGGAGCACGT 62.556 61.111 9.46 0.00 42.24 4.49
346 440 2.137425 GAGGGGGTTTCCGCAAAACG 62.137 60.000 5.30 0.00 46.85 3.60
350 444 3.391631 GTTTCCGCAAAACGCCGC 61.392 61.111 0.00 0.00 41.76 6.53
372 467 0.663269 CACGTTGCGACACTAGAGCA 60.663 55.000 4.64 0.00 39.33 4.26
470 2280 5.079643 GTGTTTATGAATATCCCAGCCCAT 58.920 41.667 0.00 0.00 0.00 4.00
471 2281 5.183904 GTGTTTATGAATATCCCAGCCCATC 59.816 44.000 0.00 0.00 0.00 3.51
472 2282 5.163001 TGTTTATGAATATCCCAGCCCATCA 60.163 40.000 0.00 0.00 0.00 3.07
473 2283 5.597430 TTATGAATATCCCAGCCCATCAA 57.403 39.130 0.00 0.00 0.00 2.57
475 2285 2.108776 TGAATATCCCAGCCCATCAAGG 59.891 50.000 0.00 0.00 37.03 3.61
477 2287 1.607225 TATCCCAGCCCATCAAGGTT 58.393 50.000 0.00 0.00 34.66 3.50
480 2290 0.251742 CCCAGCCCATCAAGGTTCAA 60.252 55.000 0.00 0.00 34.66 2.69
483 2293 2.167075 CCAGCCCATCAAGGTTCAAATC 59.833 50.000 0.00 0.00 34.66 2.17
484 2294 2.167075 CAGCCCATCAAGGTTCAAATCC 59.833 50.000 0.00 0.00 34.66 3.01
485 2295 2.043526 AGCCCATCAAGGTTCAAATCCT 59.956 45.455 0.00 0.00 36.81 3.24
488 2298 2.762327 CCATCAAGGTTCAAATCCTGGG 59.238 50.000 0.00 0.00 35.27 4.45
489 2299 1.923356 TCAAGGTTCAAATCCTGGGC 58.077 50.000 0.00 0.00 35.27 5.36
490 2300 1.428912 TCAAGGTTCAAATCCTGGGCT 59.571 47.619 0.00 0.00 35.27 5.19
491 2301 1.821136 CAAGGTTCAAATCCTGGGCTC 59.179 52.381 0.00 0.00 35.27 4.70
492 2302 0.035056 AGGTTCAAATCCTGGGCTCG 60.035 55.000 0.00 0.00 33.62 5.03
493 2303 1.657751 GGTTCAAATCCTGGGCTCGC 61.658 60.000 0.00 0.00 0.00 5.03
494 2304 0.960364 GTTCAAATCCTGGGCTCGCA 60.960 55.000 0.00 0.00 0.00 5.10
495 2305 0.034186 TTCAAATCCTGGGCTCGCAT 60.034 50.000 0.00 0.00 0.00 4.73
496 2306 0.034186 TCAAATCCTGGGCTCGCATT 60.034 50.000 0.00 0.00 0.00 3.56
497 2307 0.819582 CAAATCCTGGGCTCGCATTT 59.180 50.000 0.00 0.00 0.00 2.32
498 2308 2.023673 CAAATCCTGGGCTCGCATTTA 58.976 47.619 0.00 0.00 0.00 1.40
499 2309 2.624838 CAAATCCTGGGCTCGCATTTAT 59.375 45.455 0.00 0.00 0.00 1.40
500 2310 2.664402 ATCCTGGGCTCGCATTTATT 57.336 45.000 0.00 0.00 0.00 1.40
501 2311 2.435372 TCCTGGGCTCGCATTTATTT 57.565 45.000 0.00 0.00 0.00 1.40
502 2312 2.297701 TCCTGGGCTCGCATTTATTTC 58.702 47.619 0.00 0.00 0.00 2.17
503 2313 2.092429 TCCTGGGCTCGCATTTATTTCT 60.092 45.455 0.00 0.00 0.00 2.52
504 2314 3.135712 TCCTGGGCTCGCATTTATTTCTA 59.864 43.478 0.00 0.00 0.00 2.10
505 2315 3.499918 CCTGGGCTCGCATTTATTTCTAG 59.500 47.826 0.00 0.00 0.00 2.43
506 2316 4.380531 CTGGGCTCGCATTTATTTCTAGA 58.619 43.478 0.00 0.00 0.00 2.43
507 2317 4.973168 TGGGCTCGCATTTATTTCTAGAT 58.027 39.130 0.00 0.00 0.00 1.98
508 2318 5.376625 TGGGCTCGCATTTATTTCTAGATT 58.623 37.500 0.00 0.00 0.00 2.40
509 2319 5.827797 TGGGCTCGCATTTATTTCTAGATTT 59.172 36.000 0.00 0.00 0.00 2.17
510 2320 6.995686 TGGGCTCGCATTTATTTCTAGATTTA 59.004 34.615 0.00 0.00 0.00 1.40
511 2321 7.665559 TGGGCTCGCATTTATTTCTAGATTTAT 59.334 33.333 0.00 0.00 0.00 1.40
512 2322 8.515414 GGGCTCGCATTTATTTCTAGATTTATT 58.485 33.333 0.00 0.00 0.00 1.40
513 2323 9.899226 GGCTCGCATTTATTTCTAGATTTATTT 57.101 29.630 0.00 0.00 0.00 1.40
527 2337 9.555727 TCTAGATTTATTTTAGGATTTCCGGTG 57.444 33.333 0.00 0.00 42.08 4.94
528 2338 9.555727 CTAGATTTATTTTAGGATTTCCGGTGA 57.444 33.333 0.00 0.00 42.08 4.02
529 2339 8.996651 AGATTTATTTTAGGATTTCCGGTGAT 57.003 30.769 0.00 0.00 42.08 3.06
530 2340 8.850156 AGATTTATTTTAGGATTTCCGGTGATG 58.150 33.333 0.00 0.00 42.08 3.07
531 2341 4.918810 ATTTTAGGATTTCCGGTGATGC 57.081 40.909 0.00 2.01 42.08 3.91
532 2342 3.358111 TTTAGGATTTCCGGTGATGCA 57.642 42.857 0.00 0.00 42.08 3.96
533 2343 2.325583 TAGGATTTCCGGTGATGCAC 57.674 50.000 0.00 0.00 42.08 4.57
534 2344 0.327924 AGGATTTCCGGTGATGCACA 59.672 50.000 0.00 0.00 42.08 4.57
535 2345 1.064463 AGGATTTCCGGTGATGCACAT 60.064 47.619 0.00 0.00 42.08 3.21
536 2346 1.750778 GGATTTCCGGTGATGCACATT 59.249 47.619 0.00 0.00 35.86 2.71
537 2347 2.223572 GGATTTCCGGTGATGCACATTC 60.224 50.000 0.00 0.00 35.86 2.67
538 2348 1.902938 TTTCCGGTGATGCACATTCA 58.097 45.000 0.00 0.00 35.86 2.57
539 2349 1.452110 TTCCGGTGATGCACATTCAG 58.548 50.000 0.00 0.00 35.86 3.02
540 2350 0.324614 TCCGGTGATGCACATTCAGT 59.675 50.000 0.00 0.00 35.86 3.41
549 2359 3.869623 CACATTCAGTGGGAGGAGG 57.130 57.895 0.00 0.00 44.69 4.30
550 2360 1.279496 CACATTCAGTGGGAGGAGGA 58.721 55.000 0.00 0.00 44.69 3.71
551 2361 1.209019 CACATTCAGTGGGAGGAGGAG 59.791 57.143 0.00 0.00 44.69 3.69
552 2362 1.203364 ACATTCAGTGGGAGGAGGAGT 60.203 52.381 0.00 0.00 0.00 3.85
553 2363 1.912043 CATTCAGTGGGAGGAGGAGTT 59.088 52.381 0.00 0.00 0.00 3.01
554 2364 1.645710 TTCAGTGGGAGGAGGAGTTC 58.354 55.000 0.00 0.00 0.00 3.01
562 2372 2.883621 GGAGGAGTTCCCGTCGAC 59.116 66.667 5.18 5.18 40.37 4.20
563 2373 2.484203 GAGGAGTTCCCGTCGACG 59.516 66.667 30.33 30.33 40.87 5.12
564 2374 2.033141 AGGAGTTCCCGTCGACGA 59.967 61.111 37.65 17.67 43.02 4.20
565 2375 2.177778 GGAGTTCCCGTCGACGAC 59.822 66.667 37.65 26.88 43.02 4.34
575 2385 2.046988 TCGACGACGAGGTGCCTA 60.047 61.111 5.75 0.00 43.81 3.93
576 2386 2.099831 CGACGACGAGGTGCCTAC 59.900 66.667 0.00 0.00 42.66 3.18
577 2387 2.099831 GACGACGAGGTGCCTACG 59.900 66.667 0.00 9.22 0.00 3.51
578 2388 3.392595 GACGACGAGGTGCCTACGG 62.393 68.421 0.00 1.18 0.00 4.02
579 2389 3.437795 CGACGAGGTGCCTACGGT 61.438 66.667 12.22 3.01 0.00 4.83
580 2390 2.181021 GACGAGGTGCCTACGGTG 59.819 66.667 12.22 0.00 0.00 4.94
581 2391 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
582 2392 2.181021 CGAGGTGCCTACGGTGAC 59.819 66.667 0.00 0.00 0.00 3.67
583 2393 2.341101 CGAGGTGCCTACGGTGACT 61.341 63.158 0.00 0.00 0.00 3.41
584 2394 1.874345 CGAGGTGCCTACGGTGACTT 61.874 60.000 0.00 0.00 0.00 3.01
585 2395 0.108756 GAGGTGCCTACGGTGACTTC 60.109 60.000 0.00 0.00 0.00 3.01
586 2396 1.445582 GGTGCCTACGGTGACTTCG 60.446 63.158 0.00 0.00 0.00 3.79
587 2397 1.288127 GTGCCTACGGTGACTTCGT 59.712 57.895 0.00 0.00 43.64 3.85
588 2398 0.523072 GTGCCTACGGTGACTTCGTA 59.477 55.000 0.00 0.00 41.38 3.43
589 2399 1.068333 GTGCCTACGGTGACTTCGTAA 60.068 52.381 0.00 0.00 41.62 3.18
590 2400 1.612950 TGCCTACGGTGACTTCGTAAA 59.387 47.619 0.00 0.00 41.62 2.01
591 2401 2.231964 TGCCTACGGTGACTTCGTAAAT 59.768 45.455 0.00 0.00 41.62 1.40
592 2402 3.256558 GCCTACGGTGACTTCGTAAATT 58.743 45.455 0.00 0.00 41.62 1.82
593 2403 3.681417 GCCTACGGTGACTTCGTAAATTT 59.319 43.478 0.00 0.00 41.62 1.82
594 2404 4.201656 GCCTACGGTGACTTCGTAAATTTC 60.202 45.833 0.00 0.00 41.62 2.17
595 2405 4.925054 CCTACGGTGACTTCGTAAATTTCA 59.075 41.667 0.00 0.00 41.62 2.69
596 2406 5.406175 CCTACGGTGACTTCGTAAATTTCAA 59.594 40.000 0.00 0.00 41.62 2.69
597 2407 5.338614 ACGGTGACTTCGTAAATTTCAAG 57.661 39.130 0.00 0.00 39.22 3.02
598 2408 5.051816 ACGGTGACTTCGTAAATTTCAAGA 58.948 37.500 0.00 0.00 39.22 3.02
599 2409 5.699458 ACGGTGACTTCGTAAATTTCAAGAT 59.301 36.000 0.00 0.00 39.22 2.40
600 2410 6.015504 CGGTGACTTCGTAAATTTCAAGATG 58.984 40.000 0.00 0.00 0.00 2.90
601 2411 6.128661 CGGTGACTTCGTAAATTTCAAGATGA 60.129 38.462 0.00 0.00 0.00 2.92
602 2412 7.570507 CGGTGACTTCGTAAATTTCAAGATGAA 60.571 37.037 0.00 0.00 34.03 2.57
603 2413 8.237267 GGTGACTTCGTAAATTTCAAGATGAAT 58.763 33.333 0.00 0.00 36.11 2.57
607 2417 9.722056 ACTTCGTAAATTTCAAGATGAATATGC 57.278 29.630 0.00 0.00 36.11 3.14
608 2418 9.173939 CTTCGTAAATTTCAAGATGAATATGCC 57.826 33.333 0.00 0.00 36.11 4.40
609 2419 7.351981 TCGTAAATTTCAAGATGAATATGCCG 58.648 34.615 0.00 0.00 36.11 5.69
610 2420 6.578545 CGTAAATTTCAAGATGAATATGCCGG 59.421 38.462 0.00 0.00 36.11 6.13
611 2421 3.988379 TTTCAAGATGAATATGCCGGC 57.012 42.857 22.73 22.73 36.11 6.13
612 2422 2.936919 TCAAGATGAATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
613 2423 2.771089 TCAAGATGAATATGCCGGCTC 58.229 47.619 29.70 17.48 0.00 4.70
614 2424 2.104622 TCAAGATGAATATGCCGGCTCA 59.895 45.455 29.70 22.95 0.00 4.26
615 2425 2.469274 AGATGAATATGCCGGCTCAG 57.531 50.000 29.70 0.00 0.00 3.35
616 2426 1.696336 AGATGAATATGCCGGCTCAGT 59.304 47.619 29.70 14.63 0.00 3.41
617 2427 2.105477 AGATGAATATGCCGGCTCAGTT 59.895 45.455 29.70 16.71 0.00 3.16
618 2428 2.418368 TGAATATGCCGGCTCAGTTT 57.582 45.000 29.70 13.80 0.00 2.66
619 2429 2.722094 TGAATATGCCGGCTCAGTTTT 58.278 42.857 29.70 12.32 0.00 2.43
620 2430 2.682856 TGAATATGCCGGCTCAGTTTTC 59.317 45.455 29.70 19.92 0.00 2.29
621 2431 1.299541 ATATGCCGGCTCAGTTTTCG 58.700 50.000 29.70 0.00 0.00 3.46
622 2432 0.742990 TATGCCGGCTCAGTTTTCGG 60.743 55.000 29.70 0.00 44.70 4.30
623 2433 2.358247 GCCGGCTCAGTTTTCGGA 60.358 61.111 22.15 0.00 44.69 4.55
624 2434 2.391389 GCCGGCTCAGTTTTCGGAG 61.391 63.158 22.15 0.00 44.69 4.63
625 2435 1.741770 CCGGCTCAGTTTTCGGAGG 60.742 63.158 0.00 0.00 44.69 4.30
626 2436 1.004918 CGGCTCAGTTTTCGGAGGT 60.005 57.895 0.00 0.00 41.28 3.85
627 2437 1.291877 CGGCTCAGTTTTCGGAGGTG 61.292 60.000 0.00 0.00 41.28 4.00
628 2438 1.578206 GGCTCAGTTTTCGGAGGTGC 61.578 60.000 0.00 0.00 41.28 5.01
629 2439 0.603975 GCTCAGTTTTCGGAGGTGCT 60.604 55.000 0.00 0.00 41.28 4.40
630 2440 1.433534 CTCAGTTTTCGGAGGTGCTC 58.566 55.000 0.00 0.00 38.22 4.26
631 2441 0.756294 TCAGTTTTCGGAGGTGCTCA 59.244 50.000 0.00 0.00 31.08 4.26
632 2442 1.347707 TCAGTTTTCGGAGGTGCTCAT 59.652 47.619 0.00 0.00 31.08 2.90
633 2443 1.734465 CAGTTTTCGGAGGTGCTCATC 59.266 52.381 0.00 0.00 31.08 2.92
634 2444 0.721718 GTTTTCGGAGGTGCTCATCG 59.278 55.000 0.00 0.00 31.08 3.84
635 2445 0.606096 TTTTCGGAGGTGCTCATCGA 59.394 50.000 0.00 0.00 31.08 3.59
636 2446 0.173481 TTTCGGAGGTGCTCATCGAG 59.827 55.000 0.00 0.00 29.32 4.04
637 2447 0.679960 TTCGGAGGTGCTCATCGAGA 60.680 55.000 0.00 0.00 29.32 4.04
638 2448 0.466372 TCGGAGGTGCTCATCGAGAT 60.466 55.000 0.00 0.00 31.08 2.75
639 2449 0.318529 CGGAGGTGCTCATCGAGATG 60.319 60.000 6.74 6.74 40.09 2.90
640 2450 1.035923 GGAGGTGCTCATCGAGATGA 58.964 55.000 14.26 14.26 44.83 2.92
648 2458 0.101219 TCATCGAGATGAGGTGTGCG 59.899 55.000 11.37 0.00 42.42 5.34
649 2459 0.179127 CATCGAGATGAGGTGTGCGT 60.179 55.000 7.26 0.00 41.20 5.24
650 2460 0.179127 ATCGAGATGAGGTGTGCGTG 60.179 55.000 0.00 0.00 0.00 5.34
651 2461 1.080501 CGAGATGAGGTGTGCGTGT 60.081 57.895 0.00 0.00 0.00 4.49
652 2462 1.347097 CGAGATGAGGTGTGCGTGTG 61.347 60.000 0.00 0.00 0.00 3.82
653 2463 0.319900 GAGATGAGGTGTGCGTGTGT 60.320 55.000 0.00 0.00 0.00 3.72
654 2464 0.966179 AGATGAGGTGTGCGTGTGTA 59.034 50.000 0.00 0.00 0.00 2.90
655 2465 1.068474 GATGAGGTGTGCGTGTGTAC 58.932 55.000 0.00 0.00 0.00 2.90
666 2476 1.917273 CGTGTGTACGTTCATAGGGG 58.083 55.000 0.00 0.00 44.99 4.79
667 2477 1.203052 CGTGTGTACGTTCATAGGGGT 59.797 52.381 0.00 0.00 44.99 4.95
668 2478 2.613691 GTGTGTACGTTCATAGGGGTG 58.386 52.381 0.00 0.00 0.00 4.61
669 2479 2.231964 GTGTGTACGTTCATAGGGGTGA 59.768 50.000 0.00 0.00 0.00 4.02
670 2480 2.494471 TGTGTACGTTCATAGGGGTGAG 59.506 50.000 0.00 0.00 0.00 3.51
671 2481 2.494870 GTGTACGTTCATAGGGGTGAGT 59.505 50.000 0.00 0.00 0.00 3.41
672 2482 2.494471 TGTACGTTCATAGGGGTGAGTG 59.506 50.000 0.00 0.00 0.00 3.51
673 2483 1.640917 ACGTTCATAGGGGTGAGTGT 58.359 50.000 0.00 0.00 0.00 3.55
674 2484 2.811410 ACGTTCATAGGGGTGAGTGTA 58.189 47.619 0.00 0.00 0.00 2.90
675 2485 3.371965 ACGTTCATAGGGGTGAGTGTAT 58.628 45.455 0.00 0.00 0.00 2.29
676 2486 3.132289 ACGTTCATAGGGGTGAGTGTATG 59.868 47.826 0.00 0.00 0.00 2.39
677 2487 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
678 2488 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
679 2489 1.412710 CATAGGGGTGAGTGTATGCGT 59.587 52.381 0.00 0.00 0.00 5.24
680 2490 2.440517 TAGGGGTGAGTGTATGCGTA 57.559 50.000 0.00 0.00 0.00 4.42
681 2491 1.789523 AGGGGTGAGTGTATGCGTAT 58.210 50.000 0.00 0.00 0.00 3.06
682 2492 1.412710 AGGGGTGAGTGTATGCGTATG 59.587 52.381 0.00 0.00 0.00 2.39
683 2493 1.138266 GGGGTGAGTGTATGCGTATGT 59.862 52.381 0.00 0.00 0.00 2.29
684 2494 2.363038 GGGGTGAGTGTATGCGTATGTA 59.637 50.000 0.00 0.00 0.00 2.29
685 2495 3.006537 GGGGTGAGTGTATGCGTATGTAT 59.993 47.826 0.00 0.00 0.00 2.29
686 2496 4.219070 GGGGTGAGTGTATGCGTATGTATA 59.781 45.833 0.00 0.00 0.00 1.47
687 2497 5.105473 GGGGTGAGTGTATGCGTATGTATAT 60.105 44.000 0.00 0.00 0.00 0.86
688 2498 5.805486 GGGTGAGTGTATGCGTATGTATATG 59.195 44.000 0.00 0.00 0.00 1.78
689 2499 6.349860 GGGTGAGTGTATGCGTATGTATATGA 60.350 42.308 0.00 0.00 0.00 2.15
690 2500 6.747739 GGTGAGTGTATGCGTATGTATATGAG 59.252 42.308 0.00 0.00 0.00 2.90
691 2501 6.251589 GTGAGTGTATGCGTATGTATATGAGC 59.748 42.308 0.00 0.00 0.00 4.26
692 2502 5.332707 AGTGTATGCGTATGTATATGAGCG 58.667 41.667 0.00 0.00 0.00 5.03
693 2503 4.027621 GTGTATGCGTATGTATATGAGCGC 60.028 45.833 0.00 0.00 44.29 5.92
694 2504 3.510388 ATGCGTATGTATATGAGCGCT 57.490 42.857 11.27 11.27 44.34 5.92
695 2505 3.297830 TGCGTATGTATATGAGCGCTT 57.702 42.857 13.26 0.00 44.34 4.68
696 2506 2.986479 TGCGTATGTATATGAGCGCTTG 59.014 45.455 13.26 0.00 44.34 4.01
697 2507 2.987149 GCGTATGTATATGAGCGCTTGT 59.013 45.455 13.26 5.98 41.37 3.16
698 2508 3.181540 GCGTATGTATATGAGCGCTTGTG 60.182 47.826 13.26 0.00 41.37 3.33
699 2509 3.981416 CGTATGTATATGAGCGCTTGTGT 59.019 43.478 13.26 4.27 0.00 3.72
700 2510 4.088638 CGTATGTATATGAGCGCTTGTGTC 59.911 45.833 13.26 0.00 0.00 3.67
701 2511 3.801114 TGTATATGAGCGCTTGTGTCT 57.199 42.857 13.26 0.00 0.00 3.41
702 2512 3.447742 TGTATATGAGCGCTTGTGTCTG 58.552 45.455 13.26 0.00 0.00 3.51
703 2513 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
704 2514 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
705 2515 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
706 2516 0.319555 TGAGCGCTTGTGTCTGTACC 60.320 55.000 13.26 0.00 0.00 3.34
707 2517 1.344942 GAGCGCTTGTGTCTGTACCG 61.345 60.000 13.26 0.00 0.00 4.02
708 2518 1.663702 GCGCTTGTGTCTGTACCGT 60.664 57.895 0.00 0.00 0.00 4.83
709 2519 1.886861 GCGCTTGTGTCTGTACCGTG 61.887 60.000 0.00 0.00 0.00 4.94
710 2520 0.596600 CGCTTGTGTCTGTACCGTGT 60.597 55.000 0.00 0.00 0.00 4.49
711 2521 1.578583 GCTTGTGTCTGTACCGTGTT 58.421 50.000 0.00 0.00 0.00 3.32
712 2522 1.937899 GCTTGTGTCTGTACCGTGTTT 59.062 47.619 0.00 0.00 0.00 2.83
713 2523 3.125316 GCTTGTGTCTGTACCGTGTTTA 58.875 45.455 0.00 0.00 0.00 2.01
714 2524 3.556775 GCTTGTGTCTGTACCGTGTTTAA 59.443 43.478 0.00 0.00 0.00 1.52
715 2525 4.034279 GCTTGTGTCTGTACCGTGTTTAAA 59.966 41.667 0.00 0.00 0.00 1.52
716 2526 5.447548 GCTTGTGTCTGTACCGTGTTTAAAA 60.448 40.000 0.00 0.00 0.00 1.52
717 2527 6.492007 TTGTGTCTGTACCGTGTTTAAAAA 57.508 33.333 0.00 0.00 0.00 1.94
823 2634 3.899545 TTCCCCTCTTCTCGCGGGT 62.900 63.158 5.57 0.00 35.78 5.28
841 2652 2.225192 GGGTGGCTAGGGTTTTAGGTTT 60.225 50.000 0.00 0.00 0.00 3.27
851 2662 2.377531 GGTTTTAGGTTTCCCTCTCCCA 59.622 50.000 0.00 0.00 41.45 4.37
854 2665 0.620700 TAGGTTTCCCTCTCCCAGCC 60.621 60.000 0.00 0.00 41.45 4.85
1039 2850 2.987125 CCAACCCCCTCAGGTACG 59.013 66.667 0.00 0.00 40.05 3.67
1158 2972 4.335874 AGCTCAGTATATTTCGTCGTGTCT 59.664 41.667 0.00 0.00 0.00 3.41
1159 2973 5.035443 GCTCAGTATATTTCGTCGTGTCTT 58.965 41.667 0.00 0.00 0.00 3.01
1251 3095 4.640771 TCCCCAGTTGATAATAGCATCC 57.359 45.455 0.00 0.00 0.00 3.51
1356 3201 2.227036 CCCTGACACCCTGCTTCCT 61.227 63.158 0.00 0.00 0.00 3.36
1365 3210 1.817099 CCTGCTTCCTCACGATGCC 60.817 63.158 0.00 0.00 40.18 4.40
1407 3260 2.805671 GCATTTCCCCGTTTCCTTTTTG 59.194 45.455 0.00 0.00 0.00 2.44
1408 3261 3.742954 GCATTTCCCCGTTTCCTTTTTGT 60.743 43.478 0.00 0.00 0.00 2.83
1409 3262 3.804786 TTTCCCCGTTTCCTTTTTGTC 57.195 42.857 0.00 0.00 0.00 3.18
1431 3284 5.413833 GTCCTTTCTGATGCTTGATTGAAGA 59.586 40.000 0.00 0.00 32.82 2.87
1439 3292 5.357878 TGATGCTTGATTGAAGAACCATACC 59.642 40.000 0.00 0.00 32.82 2.73
1484 3337 2.578480 TGTCCAATTATGTGCCCACCTA 59.422 45.455 0.00 0.00 0.00 3.08
1489 3342 4.834496 CCAATTATGTGCCCACCTATCATT 59.166 41.667 0.00 0.00 0.00 2.57
1496 3349 5.514169 TGTGCCCACCTATCATTAAATGAA 58.486 37.500 0.00 0.00 43.50 2.57
1499 3352 4.023193 GCCCACCTATCATTAAATGAACCG 60.023 45.833 0.00 0.00 43.50 4.44
1500 3353 4.023193 CCCACCTATCATTAAATGAACCGC 60.023 45.833 0.00 0.00 43.50 5.68
1511 3364 9.431887 TCATTAAATGAACCGCTTATACCTATC 57.568 33.333 0.00 0.00 36.11 2.08
1524 3377 7.262048 GCTTATACCTATCTTATCTGCCTGTC 58.738 42.308 0.00 0.00 0.00 3.51
1525 3378 7.093727 GCTTATACCTATCTTATCTGCCTGTCA 60.094 40.741 0.00 0.00 0.00 3.58
1529 3382 2.680312 TCTTATCTGCCTGTCACTGC 57.320 50.000 0.00 0.00 0.00 4.40
1679 3532 1.461127 GCAAGCCTTGACGTACTTCTG 59.539 52.381 9.04 0.00 0.00 3.02
1766 3619 3.688159 CCAAAGCCACCAGCCTGC 61.688 66.667 0.00 0.00 45.47 4.85
1823 3676 5.014202 AGTAGGAGTTTCTCTTCTCAGACC 58.986 45.833 0.00 0.00 33.40 3.85
1847 3700 2.361757 TGCAAATTCTGGTGACAAGGTG 59.638 45.455 0.00 0.00 42.06 4.00
1983 3836 4.711399 CTTGTTGGGAGATGATGCTGATA 58.289 43.478 0.00 0.00 0.00 2.15
2213 4066 5.734720 TGCCCTGTATAACTTTTCTCTCTG 58.265 41.667 0.00 0.00 0.00 3.35
2550 4410 6.398918 ACTGTTCTCATTGTAGTCGCTTATT 58.601 36.000 0.00 0.00 0.00 1.40
2927 4787 1.507562 TTGCTGATGTTCTCGCGAAA 58.492 45.000 11.33 4.88 0.00 3.46
3110 4970 1.094785 ACATATTTGCTGGTCACCGC 58.905 50.000 3.94 3.94 0.00 5.68
3590 5450 3.963374 TGAAGCCTCAGTACAGCTCATAT 59.037 43.478 0.00 0.00 35.30 1.78
3704 5564 2.552373 GGTTAGGCAGTACCAGTTGCTT 60.552 50.000 4.99 0.41 43.14 3.91
3716 5576 5.567138 ACCAGTTGCTTCTAAATGCATAC 57.433 39.130 0.00 0.00 39.07 2.39
3845 5705 9.730705 TTCAACAAGAAGAAGACATTATCTGAT 57.269 29.630 0.00 0.00 37.88 2.90
4059 5929 9.732130 GCCCTAGATTCTTATTTATGTTGATCT 57.268 33.333 0.00 0.00 0.00 2.75
4143 6017 1.668826 AGGACTGATGGGTGCCTTAA 58.331 50.000 0.00 0.00 0.00 1.85
4165 6039 6.622833 AAATTGCTTTTTGTGGGAATTCTG 57.377 33.333 5.23 0.00 33.58 3.02
4350 6228 9.125026 GATTCTAAAGGATAGGAATTTTGCAGA 57.875 33.333 0.00 0.00 0.00 4.26
4353 6231 8.739972 TCTAAAGGATAGGAATTTTGCAGAAAC 58.260 33.333 0.00 0.00 0.00 2.78
4354 6232 7.544804 AAAGGATAGGAATTTTGCAGAAACT 57.455 32.000 0.00 0.00 0.00 2.66
4374 6252 5.582689 ACTTTTTCTTTGCAGCACTAAGT 57.417 34.783 0.00 0.00 33.44 2.24
4391 6269 6.599638 GCACTAAGTTTGTAGGAATGGATTCT 59.400 38.462 0.00 0.00 37.00 2.40
4392 6270 7.121315 GCACTAAGTTTGTAGGAATGGATTCTT 59.879 37.037 0.00 0.00 37.00 2.52
4393 6271 9.667107 CACTAAGTTTGTAGGAATGGATTCTTA 57.333 33.333 0.00 0.00 37.00 2.10
4580 6525 3.247442 ACTCGCAAATTGCATTGTCATG 58.753 40.909 18.65 0.00 45.36 3.07
4588 6533 1.216178 GCATTGTCATGTGTGCCCC 59.784 57.895 0.00 0.00 32.28 5.80
4631 6576 5.425539 CAGGTCTTTAGAGATAAACCCTCCA 59.574 44.000 0.00 0.00 33.70 3.86
4632 6577 6.100424 CAGGTCTTTAGAGATAAACCCTCCAT 59.900 42.308 0.00 0.00 33.70 3.41
4676 6622 9.224058 CTTATCACGAGCTTAAAAGTACTACTC 57.776 37.037 0.00 0.00 0.00 2.59
4677 6623 5.947443 TCACGAGCTTAAAAGTACTACTCC 58.053 41.667 0.00 0.00 0.00 3.85
4678 6624 5.100943 CACGAGCTTAAAAGTACTACTCCC 58.899 45.833 0.00 0.00 0.00 4.30
4679 6625 5.015515 ACGAGCTTAAAAGTACTACTCCCT 58.984 41.667 0.00 0.00 0.00 4.20
4680 6626 5.125257 ACGAGCTTAAAAGTACTACTCCCTC 59.875 44.000 0.00 0.00 0.00 4.30
4681 6627 5.450274 CGAGCTTAAAAGTACTACTCCCTCC 60.450 48.000 0.00 0.00 0.00 4.30
4682 6628 4.401837 AGCTTAAAAGTACTACTCCCTCCG 59.598 45.833 0.00 0.00 0.00 4.63
4683 6629 4.159321 GCTTAAAAGTACTACTCCCTCCGT 59.841 45.833 0.00 0.00 0.00 4.69
4684 6630 5.358160 GCTTAAAAGTACTACTCCCTCCGTA 59.642 44.000 0.00 0.00 0.00 4.02
4685 6631 6.127619 GCTTAAAAGTACTACTCCCTCCGTAA 60.128 42.308 0.00 0.00 0.00 3.18
4686 6632 7.577616 GCTTAAAAGTACTACTCCCTCCGTAAA 60.578 40.741 0.00 0.00 0.00 2.01
4687 6633 5.911378 AAAGTACTACTCCCTCCGTAAAG 57.089 43.478 0.00 0.00 0.00 1.85
4688 6634 4.582973 AGTACTACTCCCTCCGTAAAGT 57.417 45.455 0.00 0.00 0.00 2.66
4689 6635 4.928263 AGTACTACTCCCTCCGTAAAGTT 58.072 43.478 0.00 0.00 0.00 2.66
4690 6636 6.067217 AGTACTACTCCCTCCGTAAAGTTA 57.933 41.667 0.00 0.00 0.00 2.24
4691 6637 6.118852 AGTACTACTCCCTCCGTAAAGTTAG 58.881 44.000 0.00 0.00 0.00 2.34
4692 6638 4.928263 ACTACTCCCTCCGTAAAGTTAGT 58.072 43.478 0.00 0.00 0.00 2.24
4693 6639 6.067217 ACTACTCCCTCCGTAAAGTTAGTA 57.933 41.667 0.00 0.00 0.00 1.82
4694 6640 5.883115 ACTACTCCCTCCGTAAAGTTAGTAC 59.117 44.000 0.00 0.00 0.00 2.73
4695 6641 4.666512 ACTCCCTCCGTAAAGTTAGTACA 58.333 43.478 0.00 0.00 0.00 2.90
4696 6642 5.079643 ACTCCCTCCGTAAAGTTAGTACAA 58.920 41.667 0.00 0.00 0.00 2.41
4697 6643 5.539955 ACTCCCTCCGTAAAGTTAGTACAAA 59.460 40.000 0.00 0.00 0.00 2.83
4698 6644 6.029346 TCCCTCCGTAAAGTTAGTACAAAG 57.971 41.667 0.00 0.00 0.00 2.77
4699 6645 5.539955 TCCCTCCGTAAAGTTAGTACAAAGT 59.460 40.000 0.00 0.00 0.00 2.66
4700 6646 6.041979 TCCCTCCGTAAAGTTAGTACAAAGTT 59.958 38.462 0.00 0.00 0.00 2.66
4701 6647 6.146673 CCCTCCGTAAAGTTAGTACAAAGTTG 59.853 42.308 0.00 0.00 0.00 3.16
4702 6648 6.925165 CCTCCGTAAAGTTAGTACAAAGTTGA 59.075 38.462 0.00 0.00 0.00 3.18
4703 6649 7.115947 CCTCCGTAAAGTTAGTACAAAGTTGAG 59.884 40.741 0.00 0.00 0.00 3.02
4704 6650 7.491682 TCCGTAAAGTTAGTACAAAGTTGAGT 58.508 34.615 0.00 0.00 0.00 3.41
4705 6651 7.649306 TCCGTAAAGTTAGTACAAAGTTGAGTC 59.351 37.037 0.00 0.00 0.00 3.36
4706 6652 7.436080 CCGTAAAGTTAGTACAAAGTTGAGTCA 59.564 37.037 0.00 0.00 0.00 3.41
4707 6653 8.975439 CGTAAAGTTAGTACAAAGTTGAGTCAT 58.025 33.333 0.00 0.00 0.00 3.06
4716 6662 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
4719 6665 8.078596 ACAAAGTTGAGTCATCTATTTTGAAGC 58.921 33.333 15.99 0.00 38.91 3.86
4720 6666 6.414408 AGTTGAGTCATCTATTTTGAAGCG 57.586 37.500 1.70 0.00 0.00 4.68
4721 6667 5.352569 AGTTGAGTCATCTATTTTGAAGCGG 59.647 40.000 1.70 0.00 0.00 5.52
4722 6668 5.084818 TGAGTCATCTATTTTGAAGCGGA 57.915 39.130 0.00 0.00 0.00 5.54
4723 6669 5.487433 TGAGTCATCTATTTTGAAGCGGAA 58.513 37.500 0.00 0.00 0.00 4.30
4724 6670 5.582269 TGAGTCATCTATTTTGAAGCGGAAG 59.418 40.000 0.00 0.00 0.00 3.46
4725 6671 5.734720 AGTCATCTATTTTGAAGCGGAAGA 58.265 37.500 0.00 0.00 0.00 2.87
4726 6672 6.173339 AGTCATCTATTTTGAAGCGGAAGAA 58.827 36.000 0.00 0.00 0.00 2.52
4727 6673 6.314896 AGTCATCTATTTTGAAGCGGAAGAAG 59.685 38.462 0.00 0.00 0.00 2.85
4728 6674 6.092807 GTCATCTATTTTGAAGCGGAAGAAGT 59.907 38.462 0.00 0.00 0.00 3.01
4729 6675 7.277981 GTCATCTATTTTGAAGCGGAAGAAGTA 59.722 37.037 0.00 0.00 0.00 2.24
4730 6676 7.987458 TCATCTATTTTGAAGCGGAAGAAGTAT 59.013 33.333 0.00 0.00 0.00 2.12
4731 6677 8.616076 CATCTATTTTGAAGCGGAAGAAGTATT 58.384 33.333 0.00 0.00 0.00 1.89
4732 6678 8.561738 TCTATTTTGAAGCGGAAGAAGTATTT 57.438 30.769 0.00 0.00 0.00 1.40
4733 6679 8.665685 TCTATTTTGAAGCGGAAGAAGTATTTC 58.334 33.333 0.00 0.00 0.00 2.17
4734 6680 6.627395 TTTTGAAGCGGAAGAAGTATTTCA 57.373 33.333 0.44 0.00 35.70 2.69
4735 6681 5.607119 TTGAAGCGGAAGAAGTATTTCAC 57.393 39.130 0.44 0.00 35.70 3.18
4736 6682 4.637276 TGAAGCGGAAGAAGTATTTCACA 58.363 39.130 0.44 0.00 35.70 3.58
4737 6683 5.060506 TGAAGCGGAAGAAGTATTTCACAA 58.939 37.500 0.44 0.00 35.70 3.33
4738 6684 5.705441 TGAAGCGGAAGAAGTATTTCACAAT 59.295 36.000 0.44 0.00 35.70 2.71
4739 6685 6.876789 TGAAGCGGAAGAAGTATTTCACAATA 59.123 34.615 0.44 0.00 35.70 1.90
4740 6686 7.552687 TGAAGCGGAAGAAGTATTTCACAATAT 59.447 33.333 0.44 0.00 35.70 1.28
4741 6687 7.865706 AGCGGAAGAAGTATTTCACAATATT 57.134 32.000 0.44 0.00 35.70 1.28
4742 6688 7.920738 AGCGGAAGAAGTATTTCACAATATTC 58.079 34.615 0.44 0.00 35.70 1.75
4743 6689 7.552687 AGCGGAAGAAGTATTTCACAATATTCA 59.447 33.333 0.44 0.00 35.70 2.57
4744 6690 8.345565 GCGGAAGAAGTATTTCACAATATTCAT 58.654 33.333 0.44 0.00 35.70 2.57
4745 6691 9.655769 CGGAAGAAGTATTTCACAATATTCATG 57.344 33.333 0.44 0.00 35.70 3.07
4746 6692 9.956720 GGAAGAAGTATTTCACAATATTCATGG 57.043 33.333 0.44 0.00 35.70 3.66
4747 6693 9.455847 GAAGAAGTATTTCACAATATTCATGGC 57.544 33.333 0.44 0.00 35.70 4.40
4748 6694 8.757982 AGAAGTATTTCACAATATTCATGGCT 57.242 30.769 0.44 0.00 35.70 4.75
4749 6695 9.851686 AGAAGTATTTCACAATATTCATGGCTA 57.148 29.630 0.44 0.00 35.70 3.93
4752 6698 9.407380 AGTATTTCACAATATTCATGGCTAACA 57.593 29.630 0.00 0.00 0.00 2.41
4753 6699 9.450807 GTATTTCACAATATTCATGGCTAACAC 57.549 33.333 0.00 0.00 0.00 3.32
4754 6700 6.449635 TTCACAATATTCATGGCTAACACC 57.550 37.500 0.00 0.00 0.00 4.16
4755 6701 4.887071 TCACAATATTCATGGCTAACACCC 59.113 41.667 0.00 0.00 0.00 4.61
4756 6702 4.037923 CACAATATTCATGGCTAACACCCC 59.962 45.833 0.00 0.00 0.00 4.95
4757 6703 3.525800 ATATTCATGGCTAACACCCCC 57.474 47.619 0.00 0.00 0.00 5.40
4758 6704 1.006813 ATTCATGGCTAACACCCCCA 58.993 50.000 0.00 0.00 0.00 4.96
4759 6705 0.780637 TTCATGGCTAACACCCCCAA 59.219 50.000 0.00 0.00 31.43 4.12
4760 6706 0.331278 TCATGGCTAACACCCCCAAG 59.669 55.000 0.00 0.00 31.43 3.61
4761 6707 0.684153 CATGGCTAACACCCCCAAGG 60.684 60.000 0.00 0.00 43.78 3.61
4762 6708 2.362503 GGCTAACACCCCCAAGGC 60.363 66.667 0.00 0.00 40.58 4.35
4763 6709 2.438795 GCTAACACCCCCAAGGCA 59.561 61.111 0.00 0.00 40.58 4.75
4764 6710 1.228737 GCTAACACCCCCAAGGCAA 60.229 57.895 0.00 0.00 40.58 4.52
4765 6711 0.830023 GCTAACACCCCCAAGGCAAA 60.830 55.000 0.00 0.00 40.58 3.68
4766 6712 1.710816 CTAACACCCCCAAGGCAAAA 58.289 50.000 0.00 0.00 40.58 2.44
4767 6713 2.256306 CTAACACCCCCAAGGCAAAAT 58.744 47.619 0.00 0.00 40.58 1.82
4768 6714 1.517238 AACACCCCCAAGGCAAAATT 58.483 45.000 0.00 0.00 40.58 1.82
4769 6715 1.055849 ACACCCCCAAGGCAAAATTC 58.944 50.000 0.00 0.00 40.58 2.17
4770 6716 0.324614 CACCCCCAAGGCAAAATTCC 59.675 55.000 0.00 0.00 40.58 3.01
4771 6717 0.840288 ACCCCCAAGGCAAAATTCCC 60.840 55.000 0.00 0.00 40.58 3.97
4772 6718 1.561769 CCCCCAAGGCAAAATTCCCC 61.562 60.000 0.00 0.00 0.00 4.81
4773 6719 0.547471 CCCCAAGGCAAAATTCCCCT 60.547 55.000 0.00 0.00 0.00 4.79
4774 6720 1.273552 CCCCAAGGCAAAATTCCCCTA 60.274 52.381 0.00 0.00 0.00 3.53
4775 6721 2.545810 CCCAAGGCAAAATTCCCCTAA 58.454 47.619 0.00 0.00 0.00 2.69
4776 6722 2.909662 CCCAAGGCAAAATTCCCCTAAA 59.090 45.455 0.00 0.00 0.00 1.85
4777 6723 3.329225 CCCAAGGCAAAATTCCCCTAAAA 59.671 43.478 0.00 0.00 0.00 1.52
4778 6724 4.202514 CCCAAGGCAAAATTCCCCTAAAAA 60.203 41.667 0.00 0.00 0.00 1.94
4795 6741 3.413846 AAAAAGTACTCCCTCCGTTCC 57.586 47.619 0.00 0.00 0.00 3.62
4796 6742 2.019807 AAAGTACTCCCTCCGTTCCA 57.980 50.000 0.00 0.00 0.00 3.53
4797 6743 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
4798 6744 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
4799 6745 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
4800 6746 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
4801 6747 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
4802 6748 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4803 6749 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
4804 6750 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4805 6751 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
4806 6752 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
4807 6753 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4808 6754 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
4809 6755 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
4810 6756 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
4811 6757 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
4812 6758 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
4813 6759 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
4814 6760 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
4815 6761 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
4816 6762 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
4817 6763 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
4818 6764 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
4819 6765 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
4820 6766 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
4853 6799 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
4856 6802 9.736023 ACAAAGTTGAGTCATCTATTTTGAAAC 57.264 29.630 15.99 0.00 38.91 2.78
4857 6803 8.895845 CAAAGTTGAGTCATCTATTTTGAAACG 58.104 33.333 4.14 0.00 38.91 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 5.447818 GCTCGTTCATCAAAGATGGTTAAGG 60.448 44.000 7.11 1.54 0.00 2.69
26 27 5.861727 AGTAAGCCTCTACTAGACTAGCTC 58.138 45.833 9.52 0.00 30.13 4.09
59 60 8.638685 ACATGTGTGAATACGTAAACTATACC 57.361 34.615 0.00 0.00 0.00 2.73
154 155 8.793592 CCCTAGAGGCAATAATAAAATGGTTAC 58.206 37.037 0.00 0.00 0.00 2.50
194 195 5.189145 TCTCTCTAATCCCTAACCAACCAAC 59.811 44.000 0.00 0.00 0.00 3.77
212 213 1.762957 CCCTCGTCTCTCTCTCTCTCT 59.237 57.143 0.00 0.00 0.00 3.10
236 237 2.124693 GCCTCCCTCCTCGTCTCTG 61.125 68.421 0.00 0.00 0.00 3.35
255 256 2.372690 CGTCGCTCTTTGTCCCGTG 61.373 63.158 0.00 0.00 0.00 4.94
264 265 0.250793 TCCTCTCTCTCGTCGCTCTT 59.749 55.000 0.00 0.00 0.00 2.85
305 398 3.929610 CACATTTTTGGAAACCAACACGT 59.070 39.130 2.53 0.00 43.82 4.49
308 401 4.383552 CCCTCACATTTTTGGAAACCAACA 60.384 41.667 2.53 0.00 43.82 3.33
351 445 1.344942 CTCTAGTGTCGCAACGTGGC 61.345 60.000 4.32 4.32 0.00 5.01
352 446 1.344942 GCTCTAGTGTCGCAACGTGG 61.345 60.000 0.00 0.00 0.00 4.94
354 448 0.031585 TTGCTCTAGTGTCGCAACGT 59.968 50.000 7.18 0.00 38.59 3.99
355 449 2.809181 TTGCTCTAGTGTCGCAACG 58.191 52.632 7.18 0.00 38.59 4.10
357 451 0.666274 CGGTTGCTCTAGTGTCGCAA 60.666 55.000 7.18 7.18 40.93 4.85
358 452 1.080772 CGGTTGCTCTAGTGTCGCA 60.081 57.895 0.00 0.00 0.00 5.10
453 2263 3.245514 CCTTGATGGGCTGGGATATTCAT 60.246 47.826 0.00 0.00 0.00 2.57
455 2265 2.108952 ACCTTGATGGGCTGGGATATTC 59.891 50.000 0.00 0.00 41.11 1.75
458 2268 1.494721 GAACCTTGATGGGCTGGGATA 59.505 52.381 0.00 0.00 41.11 2.59
459 2269 0.259938 GAACCTTGATGGGCTGGGAT 59.740 55.000 0.00 0.00 41.11 3.85
461 2271 0.251742 TTGAACCTTGATGGGCTGGG 60.252 55.000 0.00 0.00 41.11 4.45
463 2273 2.167075 GGATTTGAACCTTGATGGGCTG 59.833 50.000 0.00 0.00 41.11 4.85
464 2274 2.043526 AGGATTTGAACCTTGATGGGCT 59.956 45.455 0.00 0.00 41.11 5.19
465 2275 2.167075 CAGGATTTGAACCTTGATGGGC 59.833 50.000 0.00 0.00 41.11 5.36
466 2276 2.762327 CCAGGATTTGAACCTTGATGGG 59.238 50.000 0.00 0.00 41.11 4.00
470 2280 1.428912 AGCCCAGGATTTGAACCTTGA 59.571 47.619 0.00 0.00 35.35 3.02
471 2281 1.821136 GAGCCCAGGATTTGAACCTTG 59.179 52.381 0.00 0.00 35.35 3.61
472 2282 1.614317 CGAGCCCAGGATTTGAACCTT 60.614 52.381 0.00 0.00 35.35 3.50
473 2283 0.035056 CGAGCCCAGGATTTGAACCT 60.035 55.000 0.00 0.00 38.40 3.50
475 2285 0.960364 TGCGAGCCCAGGATTTGAAC 60.960 55.000 0.00 0.00 0.00 3.18
477 2287 0.034186 AATGCGAGCCCAGGATTTGA 60.034 50.000 0.00 0.00 0.00 2.69
480 2290 2.664402 ATAAATGCGAGCCCAGGATT 57.336 45.000 0.00 0.00 0.00 3.01
483 2293 2.301346 AGAAATAAATGCGAGCCCAGG 58.699 47.619 0.00 0.00 0.00 4.45
484 2294 4.380531 TCTAGAAATAAATGCGAGCCCAG 58.619 43.478 0.00 0.00 0.00 4.45
485 2295 4.415881 TCTAGAAATAAATGCGAGCCCA 57.584 40.909 0.00 0.00 0.00 5.36
501 2311 9.555727 CACCGGAAATCCTAAAATAAATCTAGA 57.444 33.333 9.46 0.00 0.00 2.43
502 2312 9.555727 TCACCGGAAATCCTAAAATAAATCTAG 57.444 33.333 9.46 0.00 0.00 2.43
504 2314 8.850156 CATCACCGGAAATCCTAAAATAAATCT 58.150 33.333 9.46 0.00 0.00 2.40
505 2315 7.595130 GCATCACCGGAAATCCTAAAATAAATC 59.405 37.037 9.46 0.00 0.00 2.17
506 2316 7.069331 TGCATCACCGGAAATCCTAAAATAAAT 59.931 33.333 9.46 0.00 0.00 1.40
507 2317 6.378564 TGCATCACCGGAAATCCTAAAATAAA 59.621 34.615 9.46 0.00 0.00 1.40
508 2318 5.888724 TGCATCACCGGAAATCCTAAAATAA 59.111 36.000 9.46 0.00 0.00 1.40
509 2319 5.298276 GTGCATCACCGGAAATCCTAAAATA 59.702 40.000 9.46 0.00 0.00 1.40
510 2320 4.097892 GTGCATCACCGGAAATCCTAAAAT 59.902 41.667 9.46 0.00 0.00 1.82
511 2321 3.442273 GTGCATCACCGGAAATCCTAAAA 59.558 43.478 9.46 0.00 0.00 1.52
512 2322 3.013921 GTGCATCACCGGAAATCCTAAA 58.986 45.455 9.46 0.00 0.00 1.85
513 2323 2.026729 TGTGCATCACCGGAAATCCTAA 60.027 45.455 9.46 0.00 32.73 2.69
514 2324 1.557371 TGTGCATCACCGGAAATCCTA 59.443 47.619 9.46 0.00 32.73 2.94
515 2325 0.327924 TGTGCATCACCGGAAATCCT 59.672 50.000 9.46 0.00 32.73 3.24
516 2326 1.392589 ATGTGCATCACCGGAAATCC 58.607 50.000 9.46 0.00 32.73 3.01
517 2327 2.423185 TGAATGTGCATCACCGGAAATC 59.577 45.455 9.46 0.00 32.73 2.17
518 2328 2.424601 CTGAATGTGCATCACCGGAAAT 59.575 45.455 9.46 0.00 32.73 2.17
519 2329 1.811965 CTGAATGTGCATCACCGGAAA 59.188 47.619 9.46 0.00 32.73 3.13
520 2330 1.271325 ACTGAATGTGCATCACCGGAA 60.271 47.619 9.46 0.00 32.73 4.30
521 2331 0.324614 ACTGAATGTGCATCACCGGA 59.675 50.000 9.46 0.00 32.73 5.14
522 2332 0.448990 CACTGAATGTGCATCACCGG 59.551 55.000 0.00 0.00 40.06 5.28
523 2333 0.448990 CCACTGAATGTGCATCACCG 59.551 55.000 0.00 0.00 44.92 4.94
524 2334 0.813184 CCCACTGAATGTGCATCACC 59.187 55.000 0.00 0.00 44.92 4.02
525 2335 1.741706 CTCCCACTGAATGTGCATCAC 59.258 52.381 0.00 0.00 44.92 3.06
526 2336 1.340308 CCTCCCACTGAATGTGCATCA 60.340 52.381 0.00 0.00 44.92 3.07
527 2337 1.065199 TCCTCCCACTGAATGTGCATC 60.065 52.381 0.00 0.00 44.92 3.91
528 2338 0.994247 TCCTCCCACTGAATGTGCAT 59.006 50.000 0.00 0.00 44.92 3.96
529 2339 0.325933 CTCCTCCCACTGAATGTGCA 59.674 55.000 0.00 0.00 44.92 4.57
530 2340 0.393537 CCTCCTCCCACTGAATGTGC 60.394 60.000 0.00 0.00 44.92 4.57
531 2341 1.209019 CTCCTCCTCCCACTGAATGTG 59.791 57.143 0.00 0.00 45.80 3.21
532 2342 1.203364 ACTCCTCCTCCCACTGAATGT 60.203 52.381 0.00 0.00 0.00 2.71
533 2343 1.577736 ACTCCTCCTCCCACTGAATG 58.422 55.000 0.00 0.00 0.00 2.67
534 2344 2.192263 GAACTCCTCCTCCCACTGAAT 58.808 52.381 0.00 0.00 0.00 2.57
535 2345 1.645710 GAACTCCTCCTCCCACTGAA 58.354 55.000 0.00 0.00 0.00 3.02
536 2346 0.252284 GGAACTCCTCCTCCCACTGA 60.252 60.000 0.00 0.00 41.61 3.41
537 2347 2.291856 GGAACTCCTCCTCCCACTG 58.708 63.158 0.00 0.00 41.61 3.66
538 2348 4.899243 GGAACTCCTCCTCCCACT 57.101 61.111 0.00 0.00 41.61 4.00
541 2351 2.039137 ACGGGAACTCCTCCTCCC 59.961 66.667 0.00 0.00 46.97 4.30
542 2352 2.416432 CGACGGGAACTCCTCCTCC 61.416 68.421 0.00 0.00 44.68 4.30
543 2353 1.378250 TCGACGGGAACTCCTCCTC 60.378 63.158 0.00 0.00 44.68 3.71
544 2354 1.678300 GTCGACGGGAACTCCTCCT 60.678 63.158 0.00 0.00 44.68 3.69
545 2355 2.883621 GTCGACGGGAACTCCTCC 59.116 66.667 0.00 0.00 44.54 4.30
546 2356 2.037136 TCGTCGACGGGAACTCCTC 61.037 63.158 35.05 0.00 40.29 3.71
547 2357 2.033141 TCGTCGACGGGAACTCCT 59.967 61.111 35.05 0.00 40.29 3.69
548 2358 2.177778 GTCGTCGACGGGAACTCC 59.822 66.667 35.05 12.40 40.29 3.85
557 2367 2.393768 TAGGCACCTCGTCGTCGAC 61.394 63.158 15.51 15.51 41.35 4.20
558 2368 2.046988 TAGGCACCTCGTCGTCGA 60.047 61.111 4.42 4.42 44.12 4.20
559 2369 2.099831 GTAGGCACCTCGTCGTCG 59.900 66.667 0.00 0.00 38.55 5.12
560 2370 2.099831 CGTAGGCACCTCGTCGTC 59.900 66.667 0.00 0.00 0.00 4.20
561 2371 3.437795 CCGTAGGCACCTCGTCGT 61.438 66.667 0.00 0.00 46.14 4.34
573 2383 6.364165 TCTTGAAATTTACGAAGTCACCGTAG 59.636 38.462 0.00 0.00 43.93 3.51
574 2384 6.215121 TCTTGAAATTTACGAAGTCACCGTA 58.785 36.000 0.00 0.00 43.93 4.02
575 2385 5.051816 TCTTGAAATTTACGAAGTCACCGT 58.948 37.500 0.00 0.00 43.93 4.83
576 2386 5.585500 TCTTGAAATTTACGAAGTCACCG 57.415 39.130 0.00 0.00 43.93 4.94
577 2387 7.129109 TCATCTTGAAATTTACGAAGTCACC 57.871 36.000 0.00 0.00 43.93 4.02
581 2391 9.722056 GCATATTCATCTTGAAATTTACGAAGT 57.278 29.630 0.00 0.00 42.06 3.01
582 2392 9.173939 GGCATATTCATCTTGAAATTTACGAAG 57.826 33.333 0.00 0.00 40.12 3.79
583 2393 7.855409 CGGCATATTCATCTTGAAATTTACGAA 59.145 33.333 0.00 0.00 40.12 3.85
584 2394 7.351981 CGGCATATTCATCTTGAAATTTACGA 58.648 34.615 0.00 0.00 40.12 3.43
585 2395 6.578545 CCGGCATATTCATCTTGAAATTTACG 59.421 38.462 0.00 0.00 40.12 3.18
586 2396 6.363357 GCCGGCATATTCATCTTGAAATTTAC 59.637 38.462 24.80 0.00 40.12 2.01
587 2397 6.265196 AGCCGGCATATTCATCTTGAAATTTA 59.735 34.615 31.54 0.00 40.12 1.40
588 2398 5.069516 AGCCGGCATATTCATCTTGAAATTT 59.930 36.000 31.54 0.00 40.12 1.82
589 2399 4.586001 AGCCGGCATATTCATCTTGAAATT 59.414 37.500 31.54 0.00 40.12 1.82
590 2400 4.147321 AGCCGGCATATTCATCTTGAAAT 58.853 39.130 31.54 0.00 40.12 2.17
591 2401 3.554934 AGCCGGCATATTCATCTTGAAA 58.445 40.909 31.54 0.00 40.12 2.69
592 2402 3.141398 GAGCCGGCATATTCATCTTGAA 58.859 45.455 31.54 0.00 41.09 2.69
593 2403 2.104622 TGAGCCGGCATATTCATCTTGA 59.895 45.455 31.54 0.00 0.00 3.02
594 2404 2.483106 CTGAGCCGGCATATTCATCTTG 59.517 50.000 31.54 7.58 0.00 3.02
595 2405 2.105477 ACTGAGCCGGCATATTCATCTT 59.895 45.455 31.54 2.38 0.00 2.40
596 2406 1.696336 ACTGAGCCGGCATATTCATCT 59.304 47.619 31.54 3.33 0.00 2.90
597 2407 2.175878 ACTGAGCCGGCATATTCATC 57.824 50.000 31.54 16.18 0.00 2.92
598 2408 2.645838 AACTGAGCCGGCATATTCAT 57.354 45.000 31.54 5.22 0.00 2.57
599 2409 2.418368 AAACTGAGCCGGCATATTCA 57.582 45.000 31.54 22.06 0.00 2.57
600 2410 2.286418 CGAAAACTGAGCCGGCATATTC 60.286 50.000 31.54 18.22 0.00 1.75
601 2411 1.670811 CGAAAACTGAGCCGGCATATT 59.329 47.619 31.54 14.37 0.00 1.28
602 2412 1.299541 CGAAAACTGAGCCGGCATAT 58.700 50.000 31.54 8.11 0.00 1.78
603 2413 0.742990 CCGAAAACTGAGCCGGCATA 60.743 55.000 31.54 16.21 35.29 3.14
604 2414 2.040544 CCGAAAACTGAGCCGGCAT 61.041 57.895 31.54 14.28 35.29 4.40
605 2415 2.668212 CCGAAAACTGAGCCGGCA 60.668 61.111 31.54 7.98 35.29 5.69
606 2416 2.358247 TCCGAAAACTGAGCCGGC 60.358 61.111 21.89 21.89 41.55 6.13
607 2417 1.741770 CCTCCGAAAACTGAGCCGG 60.742 63.158 0.00 0.00 43.02 6.13
608 2418 1.004918 ACCTCCGAAAACTGAGCCG 60.005 57.895 0.00 0.00 0.00 5.52
609 2419 1.578206 GCACCTCCGAAAACTGAGCC 61.578 60.000 0.00 0.00 0.00 4.70
610 2420 0.603975 AGCACCTCCGAAAACTGAGC 60.604 55.000 0.00 0.00 0.00 4.26
611 2421 1.270305 TGAGCACCTCCGAAAACTGAG 60.270 52.381 0.00 0.00 0.00 3.35
612 2422 0.756294 TGAGCACCTCCGAAAACTGA 59.244 50.000 0.00 0.00 0.00 3.41
613 2423 1.734465 GATGAGCACCTCCGAAAACTG 59.266 52.381 0.00 0.00 0.00 3.16
614 2424 1.673033 CGATGAGCACCTCCGAAAACT 60.673 52.381 0.00 0.00 0.00 2.66
615 2425 0.721718 CGATGAGCACCTCCGAAAAC 59.278 55.000 0.00 0.00 0.00 2.43
616 2426 0.606096 TCGATGAGCACCTCCGAAAA 59.394 50.000 0.00 0.00 0.00 2.29
617 2427 0.173481 CTCGATGAGCACCTCCGAAA 59.827 55.000 0.00 0.00 0.00 3.46
618 2428 0.679960 TCTCGATGAGCACCTCCGAA 60.680 55.000 0.00 0.00 0.00 4.30
619 2429 0.466372 ATCTCGATGAGCACCTCCGA 60.466 55.000 0.00 0.00 0.00 4.55
620 2430 0.318529 CATCTCGATGAGCACCTCCG 60.319 60.000 0.59 0.00 41.20 4.63
621 2431 1.035923 TCATCTCGATGAGCACCTCC 58.964 55.000 5.53 0.00 42.42 4.30
629 2439 0.101219 CGCACACCTCATCTCGATGA 59.899 55.000 9.09 9.09 44.83 2.92
630 2440 0.179127 ACGCACACCTCATCTCGATG 60.179 55.000 0.45 0.45 40.09 3.84
631 2441 0.179127 CACGCACACCTCATCTCGAT 60.179 55.000 0.00 0.00 0.00 3.59
632 2442 1.212751 CACGCACACCTCATCTCGA 59.787 57.895 0.00 0.00 0.00 4.04
633 2443 1.080501 ACACGCACACCTCATCTCG 60.081 57.895 0.00 0.00 0.00 4.04
634 2444 0.319900 ACACACGCACACCTCATCTC 60.320 55.000 0.00 0.00 0.00 2.75
635 2445 0.966179 TACACACGCACACCTCATCT 59.034 50.000 0.00 0.00 0.00 2.90
636 2446 1.068474 GTACACACGCACACCTCATC 58.932 55.000 0.00 0.00 0.00 2.92
637 2447 0.666274 CGTACACACGCACACCTCAT 60.666 55.000 0.00 0.00 42.05 2.90
638 2448 1.299544 CGTACACACGCACACCTCA 60.300 57.895 0.00 0.00 42.05 3.86
639 2449 3.534160 CGTACACACGCACACCTC 58.466 61.111 0.00 0.00 42.05 3.85
648 2458 2.231964 TCACCCCTATGAACGTACACAC 59.768 50.000 0.00 0.00 0.00 3.82
649 2459 2.494471 CTCACCCCTATGAACGTACACA 59.506 50.000 0.00 0.00 0.00 3.72
650 2460 2.494870 ACTCACCCCTATGAACGTACAC 59.505 50.000 0.00 0.00 0.00 2.90
651 2461 2.494471 CACTCACCCCTATGAACGTACA 59.506 50.000 0.00 0.00 0.00 2.90
652 2462 2.494870 ACACTCACCCCTATGAACGTAC 59.505 50.000 0.00 0.00 0.00 3.67
653 2463 2.811410 ACACTCACCCCTATGAACGTA 58.189 47.619 0.00 0.00 0.00 3.57
654 2464 1.640917 ACACTCACCCCTATGAACGT 58.359 50.000 0.00 0.00 0.00 3.99
655 2465 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
656 2466 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
657 2467 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
658 2468 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
659 2469 1.412710 ACGCATACACTCACCCCTATG 59.587 52.381 0.00 0.00 0.00 2.23
660 2470 1.789523 ACGCATACACTCACCCCTAT 58.210 50.000 0.00 0.00 0.00 2.57
661 2471 2.440517 TACGCATACACTCACCCCTA 57.559 50.000 0.00 0.00 0.00 3.53
662 2472 1.412710 CATACGCATACACTCACCCCT 59.587 52.381 0.00 0.00 0.00 4.79
663 2473 1.138266 ACATACGCATACACTCACCCC 59.862 52.381 0.00 0.00 0.00 4.95
664 2474 2.596904 ACATACGCATACACTCACCC 57.403 50.000 0.00 0.00 0.00 4.61
665 2475 6.617879 TCATATACATACGCATACACTCACC 58.382 40.000 0.00 0.00 0.00 4.02
666 2476 6.251589 GCTCATATACATACGCATACACTCAC 59.748 42.308 0.00 0.00 0.00 3.51
667 2477 6.322491 GCTCATATACATACGCATACACTCA 58.678 40.000 0.00 0.00 0.00 3.41
668 2478 5.452623 CGCTCATATACATACGCATACACTC 59.547 44.000 0.00 0.00 0.00 3.51
669 2479 5.332707 CGCTCATATACATACGCATACACT 58.667 41.667 0.00 0.00 0.00 3.55
670 2480 4.027621 GCGCTCATATACATACGCATACAC 60.028 45.833 0.00 0.00 45.25 2.90
671 2481 4.102649 GCGCTCATATACATACGCATACA 58.897 43.478 0.00 0.00 45.25 2.29
672 2482 4.677683 GCGCTCATATACATACGCATAC 57.322 45.455 0.00 0.00 45.25 2.39
676 2486 2.987149 ACAAGCGCTCATATACATACGC 59.013 45.455 12.06 0.00 46.20 4.42
677 2487 3.981416 ACACAAGCGCTCATATACATACG 59.019 43.478 12.06 0.00 0.00 3.06
678 2488 5.117745 CAGACACAAGCGCTCATATACATAC 59.882 44.000 12.06 0.00 0.00 2.39
679 2489 5.221244 ACAGACACAAGCGCTCATATACATA 60.221 40.000 12.06 0.00 0.00 2.29
680 2490 4.053983 CAGACACAAGCGCTCATATACAT 58.946 43.478 12.06 0.00 0.00 2.29
681 2491 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
682 2492 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
683 2493 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
684 2494 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
685 2495 2.416836 GGTACAGACACAAGCGCTCATA 60.417 50.000 12.06 0.00 0.00 2.15
686 2496 1.673033 GGTACAGACACAAGCGCTCAT 60.673 52.381 12.06 0.00 0.00 2.90
687 2497 0.319555 GGTACAGACACAAGCGCTCA 60.320 55.000 12.06 0.00 0.00 4.26
688 2498 1.344942 CGGTACAGACACAAGCGCTC 61.345 60.000 12.06 0.00 0.00 5.03
689 2499 1.372997 CGGTACAGACACAAGCGCT 60.373 57.895 2.64 2.64 0.00 5.92
690 2500 1.663702 ACGGTACAGACACAAGCGC 60.664 57.895 0.00 0.00 37.62 5.92
691 2501 0.596600 ACACGGTACAGACACAAGCG 60.597 55.000 0.00 0.00 39.81 4.68
692 2502 1.578583 AACACGGTACAGACACAAGC 58.421 50.000 0.00 0.00 0.00 4.01
693 2503 5.721876 TTTAAACACGGTACAGACACAAG 57.278 39.130 0.00 0.00 0.00 3.16
694 2504 6.492007 TTTTTAAACACGGTACAGACACAA 57.508 33.333 0.00 0.00 0.00 3.33
718 2528 7.435192 CGGAGAAATTACACTTTTCTGCTTTTT 59.565 33.333 13.34 0.00 44.56 1.94
719 2529 6.918022 CGGAGAAATTACACTTTTCTGCTTTT 59.082 34.615 13.34 0.00 44.56 2.27
720 2530 6.438763 CGGAGAAATTACACTTTTCTGCTTT 58.561 36.000 13.34 0.00 44.56 3.51
721 2531 5.048713 CCGGAGAAATTACACTTTTCTGCTT 60.049 40.000 0.00 0.00 44.56 3.91
722 2532 4.455877 CCGGAGAAATTACACTTTTCTGCT 59.544 41.667 0.00 0.00 44.56 4.24
723 2533 4.723248 CCGGAGAAATTACACTTTTCTGC 58.277 43.478 0.00 5.66 42.08 4.26
756 2566 6.203145 GGCGAGGAGAGTTTAGATATTTTTCC 59.797 42.308 0.00 0.00 0.00 3.13
823 2634 3.444792 GGAAACCTAAAACCCTAGCCA 57.555 47.619 0.00 0.00 0.00 4.75
854 2665 4.994756 ACGGGCTGCCTTTTGGGG 62.995 66.667 19.68 2.25 40.82 4.96
973 2784 4.115199 ACGGGAGATTGCTGGGCC 62.115 66.667 0.00 0.00 0.00 5.80
1407 3260 5.413833 TCTTCAATCAAGCATCAGAAAGGAC 59.586 40.000 0.00 0.00 31.26 3.85
1408 3261 5.563592 TCTTCAATCAAGCATCAGAAAGGA 58.436 37.500 0.00 0.00 31.26 3.36
1409 3262 5.892160 TCTTCAATCAAGCATCAGAAAGG 57.108 39.130 0.00 0.00 31.26 3.11
1431 3284 6.849151 AGTAAAAGAAAGGACAGGTATGGTT 58.151 36.000 0.00 0.00 0.00 3.67
1439 3292 8.571336 ACATCAATCAAGTAAAAGAAAGGACAG 58.429 33.333 0.00 0.00 0.00 3.51
1484 3337 9.959721 ATAGGTATAAGCGGTTCATTTAATGAT 57.040 29.630 8.56 0.00 39.39 2.45
1496 3349 5.127356 GGCAGATAAGATAGGTATAAGCGGT 59.873 44.000 0.00 0.00 0.00 5.68
1499 3352 7.093727 TGACAGGCAGATAAGATAGGTATAAGC 60.094 40.741 0.00 0.00 0.00 3.09
1500 3353 8.247562 GTGACAGGCAGATAAGATAGGTATAAG 58.752 40.741 0.00 0.00 0.00 1.73
1511 3364 1.209019 AGGCAGTGACAGGCAGATAAG 59.791 52.381 0.00 0.00 0.00 1.73
1524 3377 0.610174 TAGTCCTGAGCAAGGCAGTG 59.390 55.000 0.57 0.00 46.92 3.66
1525 3378 1.577736 ATAGTCCTGAGCAAGGCAGT 58.422 50.000 0.57 0.00 46.92 4.40
1529 3382 7.687837 ATACATGTTGTATAGTCCTGAGCAAGG 60.688 40.741 2.30 0.00 43.41 3.61
1573 3426 8.241367 CGGCTAAACCAGTTAACAGAATTAAAT 58.759 33.333 8.61 0.00 39.03 1.40
1679 3532 2.941064 TGCATTCTTAGCATCAGCACTC 59.059 45.455 0.00 0.00 45.49 3.51
1721 3574 0.877071 AGCAACACGATTTCTGGCAG 59.123 50.000 8.58 8.58 0.00 4.85
1823 3676 0.950836 TGTCACCAGAATTTGCACCG 59.049 50.000 0.00 0.00 0.00 4.94
1847 3700 1.265454 ACCCGTCCTCCAAGTCATCC 61.265 60.000 0.00 0.00 0.00 3.51
1983 3836 1.064017 TGGCTCCTTGTCAGGTTTTGT 60.064 47.619 0.00 0.00 41.69 2.83
2244 4097 5.208463 TCCATAATATGAGCAGCGTGTAA 57.792 39.130 1.10 0.00 0.00 2.41
2245 4098 4.864704 TCCATAATATGAGCAGCGTGTA 57.135 40.909 1.10 0.00 0.00 2.90
2550 4410 6.883756 TCATGTAATAAGACAAACATGCTGGA 59.116 34.615 8.96 0.00 45.59 3.86
2583 4443 7.189512 AGCTGCGTAAAAGTGATTGAATTATC 58.810 34.615 0.00 0.00 0.00 1.75
2584 4444 7.088589 AGCTGCGTAAAAGTGATTGAATTAT 57.911 32.000 0.00 0.00 0.00 1.28
2585 4445 6.403200 GGAGCTGCGTAAAAGTGATTGAATTA 60.403 38.462 0.00 0.00 0.00 1.40
2586 4446 5.376854 AGCTGCGTAAAAGTGATTGAATT 57.623 34.783 0.00 0.00 0.00 2.17
2587 4447 4.142600 GGAGCTGCGTAAAAGTGATTGAAT 60.143 41.667 0.00 0.00 0.00 2.57
2592 4452 2.350522 CAGGAGCTGCGTAAAAGTGAT 58.649 47.619 0.00 0.00 0.00 3.06
2645 4505 3.448686 CGAAGCATAATCACGTTCTCCT 58.551 45.455 0.00 0.00 0.00 3.69
2927 4787 5.602145 TGGTTTCACATTCTCCTTTTCCATT 59.398 36.000 0.00 0.00 0.00 3.16
3110 4970 3.671928 CCAAAATTGCTTCAGCTTTCTCG 59.328 43.478 0.00 0.00 42.66 4.04
3590 5450 8.791327 TTGAATAAGTATCAAGCAACATGAGA 57.209 30.769 0.00 0.00 33.15 3.27
3716 5576 0.167470 CAGGAGTCTTTGCATGCACG 59.833 55.000 22.58 14.84 0.00 5.34
3731 5591 7.132805 TCCTCTCTCTAAATCCATAAACAGGA 58.867 38.462 0.00 0.00 39.97 3.86
3845 5705 3.790089 TCCAGATCCTACTCGAGCATA 57.210 47.619 13.61 0.00 0.00 3.14
3903 5773 5.607477 TCATATACTTTAGCAGAAACCCGG 58.393 41.667 0.00 0.00 0.00 5.73
4003 5873 6.419484 TCGATATCTATTCCTGGCAGAAAA 57.581 37.500 17.94 10.40 0.00 2.29
4089 5959 9.702253 TGCTGGTAAAATAGGGAATATTTACAA 57.298 29.630 8.85 0.00 42.14 2.41
4143 6017 5.683681 ACAGAATTCCCACAAAAAGCAATT 58.316 33.333 0.65 0.00 0.00 2.32
4165 6039 4.505313 TCCATCATACGAGCATCAGTAC 57.495 45.455 0.00 0.00 33.17 2.73
4350 6228 6.398095 ACTTAGTGCTGCAAAGAAAAAGTTT 58.602 32.000 18.21 0.00 0.00 2.66
4353 6231 6.311200 ACAAACTTAGTGCTGCAAAGAAAAAG 59.689 34.615 18.21 11.40 0.00 2.27
4354 6232 6.162777 ACAAACTTAGTGCTGCAAAGAAAAA 58.837 32.000 18.21 1.47 0.00 1.94
4403 6281 9.440761 ACTCCTATCCTACACAGAAATAGAAAT 57.559 33.333 0.00 0.00 0.00 2.17
4404 6282 8.840200 ACTCCTATCCTACACAGAAATAGAAA 57.160 34.615 0.00 0.00 0.00 2.52
4405 6283 8.059461 TGACTCCTATCCTACACAGAAATAGAA 58.941 37.037 0.00 0.00 0.00 2.10
4406 6284 7.583625 TGACTCCTATCCTACACAGAAATAGA 58.416 38.462 0.00 0.00 0.00 1.98
4412 6290 5.141182 GGATTGACTCCTATCCTACACAGA 58.859 45.833 0.00 0.00 40.21 3.41
4426 6304 6.758886 AGATACGAAATGTGAAGGATTGACTC 59.241 38.462 0.00 0.00 31.74 3.36
4428 6306 6.910536 AGATACGAAATGTGAAGGATTGAC 57.089 37.500 0.00 0.00 30.83 3.18
4440 6318 9.855361 GTCACTTGATTCATAAGATACGAAATG 57.145 33.333 0.00 0.00 0.00 2.32
4514 6432 4.785346 AAGGCCTCTTGATATGACATGT 57.215 40.909 5.23 0.00 0.00 3.21
4547 6483 3.746045 TTTGCGAGTCCTACAGTTCTT 57.254 42.857 0.00 0.00 0.00 2.52
4580 6525 2.908688 AACAAAAATGAGGGGCACAC 57.091 45.000 0.00 0.00 0.00 3.82
4615 6560 4.348168 GCAAGGATGGAGGGTTTATCTCTA 59.652 45.833 0.00 0.00 0.00 2.43
4631 6576 7.550906 GTGATAAGACTTTCAAGTAGCAAGGAT 59.449 37.037 0.00 0.00 39.88 3.24
4632 6577 6.874134 GTGATAAGACTTTCAAGTAGCAAGGA 59.126 38.462 0.00 0.00 39.88 3.36
4676 6622 5.787380 ACTTTGTACTAACTTTACGGAGGG 58.213 41.667 0.00 0.00 0.00 4.30
4677 6623 6.925165 TCAACTTTGTACTAACTTTACGGAGG 59.075 38.462 0.00 0.00 0.00 4.30
4678 6624 7.650903 ACTCAACTTTGTACTAACTTTACGGAG 59.349 37.037 0.00 0.00 0.00 4.63
4679 6625 7.491682 ACTCAACTTTGTACTAACTTTACGGA 58.508 34.615 0.00 0.00 0.00 4.69
4680 6626 7.436080 TGACTCAACTTTGTACTAACTTTACGG 59.564 37.037 0.00 0.00 0.00 4.02
4681 6627 8.343974 TGACTCAACTTTGTACTAACTTTACG 57.656 34.615 0.00 0.00 0.00 3.18
4690 6636 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
4693 6639 8.078596 GCTTCAAAATAGATGACTCAACTTTGT 58.921 33.333 0.00 0.00 0.00 2.83
4694 6640 7.269937 CGCTTCAAAATAGATGACTCAACTTTG 59.730 37.037 0.00 0.00 0.00 2.77
4695 6641 7.301054 CGCTTCAAAATAGATGACTCAACTTT 58.699 34.615 0.00 0.00 0.00 2.66
4696 6642 6.128172 CCGCTTCAAAATAGATGACTCAACTT 60.128 38.462 0.00 0.00 0.00 2.66
4697 6643 5.352569 CCGCTTCAAAATAGATGACTCAACT 59.647 40.000 0.00 0.00 0.00 3.16
4698 6644 5.351465 TCCGCTTCAAAATAGATGACTCAAC 59.649 40.000 0.00 0.00 0.00 3.18
4699 6645 5.487433 TCCGCTTCAAAATAGATGACTCAA 58.513 37.500 0.00 0.00 0.00 3.02
4700 6646 5.084818 TCCGCTTCAAAATAGATGACTCA 57.915 39.130 0.00 0.00 0.00 3.41
4701 6647 5.812642 TCTTCCGCTTCAAAATAGATGACTC 59.187 40.000 0.00 0.00 0.00 3.36
4702 6648 5.734720 TCTTCCGCTTCAAAATAGATGACT 58.265 37.500 0.00 0.00 0.00 3.41
4703 6649 6.092807 ACTTCTTCCGCTTCAAAATAGATGAC 59.907 38.462 0.00 0.00 0.00 3.06
4704 6650 6.173339 ACTTCTTCCGCTTCAAAATAGATGA 58.827 36.000 0.00 0.00 0.00 2.92
4705 6651 6.428385 ACTTCTTCCGCTTCAAAATAGATG 57.572 37.500 0.00 0.00 0.00 2.90
4706 6652 8.738645 AATACTTCTTCCGCTTCAAAATAGAT 57.261 30.769 0.00 0.00 0.00 1.98
4707 6653 8.561738 AAATACTTCTTCCGCTTCAAAATAGA 57.438 30.769 0.00 0.00 0.00 1.98
4708 6654 8.450964 TGAAATACTTCTTCCGCTTCAAAATAG 58.549 33.333 0.00 0.00 32.33 1.73
4709 6655 8.234546 GTGAAATACTTCTTCCGCTTCAAAATA 58.765 33.333 0.00 0.00 32.33 1.40
4710 6656 7.084486 GTGAAATACTTCTTCCGCTTCAAAAT 58.916 34.615 0.00 0.00 32.33 1.82
4711 6657 6.038825 TGTGAAATACTTCTTCCGCTTCAAAA 59.961 34.615 0.00 0.00 32.33 2.44
4712 6658 5.529430 TGTGAAATACTTCTTCCGCTTCAAA 59.471 36.000 0.00 0.00 32.33 2.69
4713 6659 5.060506 TGTGAAATACTTCTTCCGCTTCAA 58.939 37.500 0.00 0.00 32.33 2.69
4714 6660 4.637276 TGTGAAATACTTCTTCCGCTTCA 58.363 39.130 0.00 0.00 32.33 3.02
4715 6661 5.607119 TTGTGAAATACTTCTTCCGCTTC 57.393 39.130 0.00 0.00 32.33 3.86
4716 6662 7.865706 ATATTGTGAAATACTTCTTCCGCTT 57.134 32.000 0.00 0.00 32.33 4.68
4717 6663 7.552687 TGAATATTGTGAAATACTTCTTCCGCT 59.447 33.333 0.00 0.00 32.33 5.52
4718 6664 7.693952 TGAATATTGTGAAATACTTCTTCCGC 58.306 34.615 0.00 0.00 32.33 5.54
4719 6665 9.655769 CATGAATATTGTGAAATACTTCTTCCG 57.344 33.333 0.00 0.00 32.33 4.30
4720 6666 9.956720 CCATGAATATTGTGAAATACTTCTTCC 57.043 33.333 0.00 0.00 32.33 3.46
4721 6667 9.455847 GCCATGAATATTGTGAAATACTTCTTC 57.544 33.333 0.00 0.00 32.33 2.87
4722 6668 9.193806 AGCCATGAATATTGTGAAATACTTCTT 57.806 29.630 0.00 0.00 32.33 2.52
4723 6669 8.757982 AGCCATGAATATTGTGAAATACTTCT 57.242 30.769 0.00 0.00 32.33 2.85
4726 6672 9.407380 TGTTAGCCATGAATATTGTGAAATACT 57.593 29.630 0.00 0.00 0.00 2.12
4727 6673 9.450807 GTGTTAGCCATGAATATTGTGAAATAC 57.549 33.333 0.00 0.00 0.00 1.89
4728 6674 8.629158 GGTGTTAGCCATGAATATTGTGAAATA 58.371 33.333 0.00 0.00 0.00 1.40
4729 6675 7.417797 GGGTGTTAGCCATGAATATTGTGAAAT 60.418 37.037 0.00 0.00 35.40 2.17
4730 6676 6.127479 GGGTGTTAGCCATGAATATTGTGAAA 60.127 38.462 0.00 0.00 35.40 2.69
4731 6677 5.359576 GGGTGTTAGCCATGAATATTGTGAA 59.640 40.000 0.00 0.00 35.40 3.18
4732 6678 4.887071 GGGTGTTAGCCATGAATATTGTGA 59.113 41.667 0.00 0.00 35.40 3.58
4733 6679 4.037923 GGGGTGTTAGCCATGAATATTGTG 59.962 45.833 0.00 0.00 37.54 3.33
4734 6680 4.215109 GGGGTGTTAGCCATGAATATTGT 58.785 43.478 0.00 0.00 37.54 2.71
4735 6681 3.573967 GGGGGTGTTAGCCATGAATATTG 59.426 47.826 0.00 0.00 37.54 1.90
4736 6682 3.206412 TGGGGGTGTTAGCCATGAATATT 59.794 43.478 0.00 0.00 37.54 1.28
4737 6683 2.788807 TGGGGGTGTTAGCCATGAATAT 59.211 45.455 0.00 0.00 37.54 1.28
4738 6684 2.209758 TGGGGGTGTTAGCCATGAATA 58.790 47.619 0.00 0.00 37.54 1.75
4739 6685 1.006813 TGGGGGTGTTAGCCATGAAT 58.993 50.000 0.00 0.00 37.54 2.57
4740 6686 0.780637 TTGGGGGTGTTAGCCATGAA 59.219 50.000 0.00 0.00 37.54 2.57
4741 6687 0.331278 CTTGGGGGTGTTAGCCATGA 59.669 55.000 0.00 0.00 37.54 3.07
4742 6688 0.684153 CCTTGGGGGTGTTAGCCATG 60.684 60.000 0.00 0.00 37.54 3.66
4743 6689 1.697297 CCTTGGGGGTGTTAGCCAT 59.303 57.895 0.00 0.00 37.54 4.40
4744 6690 3.176297 CCTTGGGGGTGTTAGCCA 58.824 61.111 0.00 0.00 37.54 4.75
4745 6691 2.362503 GCCTTGGGGGTGTTAGCC 60.363 66.667 0.00 0.00 37.43 3.93
4746 6692 0.830023 TTTGCCTTGGGGGTGTTAGC 60.830 55.000 0.00 0.00 37.43 3.09
4747 6693 1.710816 TTTTGCCTTGGGGGTGTTAG 58.289 50.000 0.00 0.00 37.43 2.34
4748 6694 2.407340 ATTTTGCCTTGGGGGTGTTA 57.593 45.000 0.00 0.00 37.43 2.41
4749 6695 1.419762 GAATTTTGCCTTGGGGGTGTT 59.580 47.619 0.00 0.00 37.43 3.32
4750 6696 1.055849 GAATTTTGCCTTGGGGGTGT 58.944 50.000 0.00 0.00 37.43 4.16
4751 6697 0.324614 GGAATTTTGCCTTGGGGGTG 59.675 55.000 0.00 0.00 37.43 4.61
4752 6698 0.840288 GGGAATTTTGCCTTGGGGGT 60.840 55.000 0.00 0.00 35.55 4.95
4753 6699 1.561769 GGGGAATTTTGCCTTGGGGG 61.562 60.000 0.69 0.00 38.90 5.40
4754 6700 0.547471 AGGGGAATTTTGCCTTGGGG 60.547 55.000 0.69 0.00 38.90 4.96
4755 6701 2.246091 TAGGGGAATTTTGCCTTGGG 57.754 50.000 0.69 0.00 38.90 4.12
4756 6702 4.632327 TTTTAGGGGAATTTTGCCTTGG 57.368 40.909 0.69 0.00 38.90 3.61
4775 6721 2.707257 TGGAACGGAGGGAGTACTTTTT 59.293 45.455 0.00 0.00 0.00 1.94
4776 6722 2.332117 TGGAACGGAGGGAGTACTTTT 58.668 47.619 0.00 0.00 0.00 2.27
4777 6723 2.019807 TGGAACGGAGGGAGTACTTT 57.980 50.000 0.00 0.00 0.00 2.66
4778 6724 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
4779 6725 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
4780 6726 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
4781 6727 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
4782 6728 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
4783 6729 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
4784 6730 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
4785 6731 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
4786 6732 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
4787 6733 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
4788 6734 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
4789 6735 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
4790 6736 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
4791 6737 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
4792 6738 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
4793 6739 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
4794 6740 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
4827 6773 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
4830 6776 9.736023 GTTTCAAAATAGATGACTCAACTTTGT 57.264 29.630 0.00 0.00 0.00 2.83
4831 6777 8.895845 CGTTTCAAAATAGATGACTCAACTTTG 58.104 33.333 0.00 0.00 0.00 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.