Multiple sequence alignment - TraesCS3B01G220100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G220100 chr3B 100.000 2366 0 0 1 2366 267429964 267432329 0.000000e+00 4370.0
1 TraesCS3B01G220100 chr3B 99.409 677 0 1 1671 2347 267430328 267431000 0.000000e+00 1225.0
2 TraesCS3B01G220100 chr3B 99.409 677 0 1 365 1037 267431634 267432310 0.000000e+00 1225.0
3 TraesCS3B01G220100 chr3B 92.883 281 20 0 1293 1573 754768686 754768406 2.190000e-110 409.0
4 TraesCS3B01G220100 chr3B 83.210 405 39 17 977 1355 790471159 790471560 6.260000e-91 344.0
5 TraesCS3B01G220100 chr3B 78.218 303 25 28 1635 1903 26313280 26312985 3.150000e-34 156.0
6 TraesCS3B01G220100 chr3B 77.736 265 16 29 365 593 26314405 26314148 3.190000e-24 122.0
7 TraesCS3B01G220100 chr3B 81.410 156 13 14 444 593 26313130 26312985 1.920000e-21 113.0
8 TraesCS3B01G220100 chr3B 81.633 98 12 5 366 459 52709459 52709364 2.520000e-10 76.8
9 TraesCS3B01G220100 chr2A 97.222 684 11 6 1671 2347 23967763 23967081 0.000000e+00 1151.0
10 TraesCS3B01G220100 chr2A 96.637 684 11 6 365 1037 23967763 23967081 0.000000e+00 1125.0
11 TraesCS3B01G220100 chr2A 84.244 311 34 11 1466 1771 7447592 7447892 2.980000e-74 289.0
12 TraesCS3B01G220100 chr2A 83.758 314 38 11 1466 1776 743088844 743089147 3.850000e-73 285.0
13 TraesCS3B01G220100 chr2A 80.189 106 14 5 365 465 25544189 25544086 3.260000e-09 73.1
14 TraesCS3B01G220100 chr1B 91.062 593 29 20 455 1038 6000324 6000901 0.000000e+00 780.0
15 TraesCS3B01G220100 chr1B 91.062 593 29 20 1763 2347 6000324 6000900 0.000000e+00 780.0
16 TraesCS3B01G220100 chr5A 83.787 771 88 31 362 1105 699367277 699368037 0.000000e+00 697.0
17 TraesCS3B01G220100 chr5A 83.333 726 84 31 1646 2347 699387325 699388037 9.220000e-179 636.0
18 TraesCS3B01G220100 chr5A 83.000 700 86 29 1671 2347 699367280 699367969 9.360000e-169 603.0
19 TraesCS3B01G220100 chr5A 83.382 686 77 31 383 1038 699387360 699388038 3.360000e-168 601.0
20 TraesCS3B01G220100 chr5A 86.017 472 62 3 1109 1577 699386855 699387325 9.760000e-139 503.0
21 TraesCS3B01G220100 chr5A 77.904 439 60 30 1452 1880 519526029 519525618 3.040000e-59 239.0
22 TraesCS3B01G220100 chr1D 90.787 445 38 2 1293 1735 46225217 46224774 2.030000e-165 592.0
23 TraesCS3B01G220100 chr5B 83.728 633 84 14 1293 1915 264881023 264880400 4.380000e-162 580.0
24 TraesCS3B01G220100 chr5B 87.868 272 25 7 1467 1736 631381215 631381480 1.770000e-81 313.0
25 TraesCS3B01G220100 chr5B 86.121 281 31 7 1466 1745 609371630 609371357 1.780000e-76 296.0
26 TraesCS3B01G220100 chr7A 94.400 375 11 2 1 366 467516354 467516727 3.410000e-158 568.0
27 TraesCS3B01G220100 chr7A 93.155 336 15 1 710 1037 724312063 724312398 9.830000e-134 486.0
28 TraesCS3B01G220100 chr7A 93.155 336 15 1 2020 2347 724312063 724312398 9.830000e-134 486.0
29 TraesCS3B01G220100 chr7A 94.921 315 7 6 1583 1890 11665082 11664770 3.540000e-133 484.0
30 TraesCS3B01G220100 chr7A 94.921 315 7 6 1583 1890 11666475 11666163 3.540000e-133 484.0
31 TraesCS3B01G220100 chr7A 90.060 332 29 2 1274 1601 650049918 650050249 6.040000e-116 427.0
32 TraesCS3B01G220100 chr7A 90.060 332 29 2 1274 1601 650051603 650051934 6.040000e-116 427.0
33 TraesCS3B01G220100 chr7A 89.759 332 30 2 1274 1601 650048232 650048563 2.810000e-114 422.0
34 TraesCS3B01G220100 chr7A 85.185 378 47 5 1232 1601 650046808 650047184 1.720000e-101 379.0
35 TraesCS3B01G220100 chr7A 96.429 224 1 4 1672 1890 11667777 11667556 1.730000e-96 363.0
36 TraesCS3B01G220100 chr7A 96.396 222 1 4 366 580 11667777 11667556 2.240000e-95 359.0
37 TraesCS3B01G220100 chr7A 95.964 223 2 4 365 580 11664992 11664770 2.890000e-94 355.0
38 TraesCS3B01G220100 chr7A 95.964 223 2 4 365 580 11666385 11666163 2.890000e-94 355.0
39 TraesCS3B01G220100 chr7A 85.185 297 28 14 1752 2036 724309733 724310025 8.270000e-75 291.0
40 TraesCS3B01G220100 chr7A 85.816 282 26 12 455 726 724309748 724310025 1.070000e-73 287.0
41 TraesCS3B01G220100 chr2B 84.598 435 56 8 1262 1695 46503362 46503786 2.810000e-114 422.0
42 TraesCS3B01G220100 chr1A 81.553 515 66 16 977 1465 310868734 310869245 4.740000e-107 398.0
43 TraesCS3B01G220100 chr3A 80.971 515 69 17 977 1465 687915087 687915598 4.770000e-102 381.0
44 TraesCS3B01G220100 chr3A 86.139 303 37 3 1470 1768 750642716 750642415 2.930000e-84 322.0
45 TraesCS3B01G220100 chr3A 79.452 219 30 14 451 664 750641811 750641603 8.820000e-30 141.0
46 TraesCS3B01G220100 chr4A 90.500 200 19 0 736 935 615159698 615159897 5.010000e-67 265.0
47 TraesCS3B01G220100 chr4A 90.500 200 19 0 2046 2245 615159698 615159897 5.010000e-67 265.0
48 TraesCS3B01G220100 chr2D 91.391 151 5 1 2205 2347 44211868 44212018 1.430000e-47 200.0
49 TraesCS3B01G220100 chrUn 78.931 318 48 11 1127 1433 183058018 183057709 5.160000e-47 198.0
50 TraesCS3B01G220100 chrUn 79.412 170 20 12 879 1039 311776045 311776208 3.220000e-19 106.0
51 TraesCS3B01G220100 chrUn 79.412 170 20 12 879 1039 331231060 331231223 3.220000e-19 106.0
52 TraesCS3B01G220100 chrUn 79.874 159 17 12 2189 2338 311776045 311776197 4.160000e-18 102.0
53 TraesCS3B01G220100 chrUn 79.874 159 17 12 2189 2338 331231060 331231212 4.160000e-18 102.0
54 TraesCS3B01G220100 chrUn 80.769 104 12 5 364 459 182686 182583 9.070000e-10 75.0
55 TraesCS3B01G220100 chr6D 88.406 138 12 4 455 589 14148799 14148663 1.880000e-36 163.0
56 TraesCS3B01G220100 chr5D 82.517 143 15 10 456 594 448716115 448715979 1.490000e-22 117.0
57 TraesCS3B01G220100 chr7B 89.394 66 7 0 365 430 623266894 623266829 1.510000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G220100 chr3B 267429964 267432329 2365 False 2273.333333 4370 99.606000 1 2366 3 chr3B.!!$F2 2365
1 TraesCS3B01G220100 chr2A 23967081 23967763 682 True 1138.000000 1151 96.929500 365 2347 2 chr2A.!!$R2 1982
2 TraesCS3B01G220100 chr1B 6000324 6000901 577 False 780.000000 780 91.062000 455 2347 2 chr1B.!!$F1 1892
3 TraesCS3B01G220100 chr5A 699367277 699368037 760 False 650.000000 697 83.393500 362 2347 2 chr5A.!!$F1 1985
4 TraesCS3B01G220100 chr5A 699386855 699388038 1183 False 580.000000 636 84.244000 383 2347 3 chr5A.!!$F2 1964
5 TraesCS3B01G220100 chr5B 264880400 264881023 623 True 580.000000 580 83.728000 1293 1915 1 chr5B.!!$R1 622
6 TraesCS3B01G220100 chr7A 650046808 650051934 5126 False 413.750000 427 88.766000 1232 1601 4 chr7A.!!$F2 369
7 TraesCS3B01G220100 chr7A 11664770 11667777 3007 True 400.000000 484 95.765833 365 1890 6 chr7A.!!$R1 1525
8 TraesCS3B01G220100 chr7A 724309733 724312398 2665 False 387.500000 486 89.327750 455 2347 4 chr7A.!!$F3 1892
9 TraesCS3B01G220100 chr1A 310868734 310869245 511 False 398.000000 398 81.553000 977 1465 1 chr1A.!!$F1 488
10 TraesCS3B01G220100 chr3A 687915087 687915598 511 False 381.000000 381 80.971000 977 1465 1 chr3A.!!$F1 488
11 TraesCS3B01G220100 chr3A 750641603 750642716 1113 True 231.500000 322 82.795500 451 1768 2 chr3A.!!$R1 1317

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.034756 TGACTTCACGTGTCCCATGG 59.965 55.0 16.51 4.14 33.83 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1969 10202 0.034337 GTTGAGTTAGTGGACGGCCA 59.966 55.0 5.41 5.41 43.47 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.938080 AGCTCTCTGTATGACATTAACGG 58.062 43.478 0.00 0.00 0.00 4.44
24 25 4.645136 AGCTCTCTGTATGACATTAACGGA 59.355 41.667 0.00 0.00 0.00 4.69
25 26 5.303078 AGCTCTCTGTATGACATTAACGGAT 59.697 40.000 0.00 0.00 0.00 4.18
26 27 5.986135 GCTCTCTGTATGACATTAACGGATT 59.014 40.000 0.00 0.00 0.00 3.01
27 28 7.014326 AGCTCTCTGTATGACATTAACGGATTA 59.986 37.037 0.00 0.00 0.00 1.75
28 29 7.327275 GCTCTCTGTATGACATTAACGGATTAG 59.673 40.741 0.00 0.36 0.00 1.73
32 33 6.350103 TGTATGACATTAACGGATTAGCCAA 58.650 36.000 0.00 0.00 35.94 4.52
33 34 6.824196 TGTATGACATTAACGGATTAGCCAAA 59.176 34.615 0.00 0.00 35.94 3.28
35 36 6.767524 TGACATTAACGGATTAGCCAAATT 57.232 33.333 0.00 0.00 35.94 1.82
36 37 6.791303 TGACATTAACGGATTAGCCAAATTC 58.209 36.000 0.00 0.00 35.94 2.17
37 38 6.375736 TGACATTAACGGATTAGCCAAATTCA 59.624 34.615 0.00 0.00 35.94 2.57
38 39 7.068103 TGACATTAACGGATTAGCCAAATTCAT 59.932 33.333 0.00 0.00 35.94 2.57
39 40 7.781056 ACATTAACGGATTAGCCAAATTCATT 58.219 30.769 0.00 0.00 35.94 2.57
40 41 8.908903 ACATTAACGGATTAGCCAAATTCATTA 58.091 29.630 0.00 0.00 35.94 1.90
42 43 8.514330 TTAACGGATTAGCCAAATTCATTAGT 57.486 30.769 0.00 0.00 35.94 2.24
43 44 7.404671 AACGGATTAGCCAAATTCATTAGTT 57.595 32.000 0.00 0.00 35.94 2.24
44 45 6.795399 ACGGATTAGCCAAATTCATTAGTTG 58.205 36.000 0.00 0.00 35.94 3.16
52 53 1.392589 ATTCATTAGTTGGCTGCCGG 58.607 50.000 14.98 0.00 0.00 6.13
53 54 1.312371 TTCATTAGTTGGCTGCCGGC 61.312 55.000 22.73 22.73 40.90 6.13
54 55 1.750399 CATTAGTTGGCTGCCGGCT 60.750 57.895 29.70 16.09 41.46 5.52
55 56 1.000896 ATTAGTTGGCTGCCGGCTT 60.001 52.632 29.70 6.77 41.46 4.35
56 57 0.611896 ATTAGTTGGCTGCCGGCTTT 60.612 50.000 29.70 7.49 41.46 3.51
57 58 1.523154 TTAGTTGGCTGCCGGCTTTG 61.523 55.000 29.70 18.36 41.46 2.77
58 59 2.690653 TAGTTGGCTGCCGGCTTTGT 62.691 55.000 29.70 8.17 41.46 2.83
62 63 4.347453 GCTGCCGGCTTTGTGGTG 62.347 66.667 29.70 8.27 38.06 4.17
63 64 3.673484 CTGCCGGCTTTGTGGTGG 61.673 66.667 29.70 2.51 0.00 4.61
65 66 2.281900 GCCGGCTTTGTGGTGGTA 60.282 61.111 22.15 0.00 0.00 3.25
66 67 2.332654 GCCGGCTTTGTGGTGGTAG 61.333 63.158 22.15 0.00 0.00 3.18
67 68 2.332654 CCGGCTTTGTGGTGGTAGC 61.333 63.158 0.00 0.00 0.00 3.58
68 69 1.599518 CGGCTTTGTGGTGGTAGCA 60.600 57.895 0.00 0.00 35.36 3.49
93 94 1.302033 CGATATGCACCCTCTGGCC 60.302 63.158 0.00 0.00 33.59 5.36
94 95 1.762522 CGATATGCACCCTCTGGCCT 61.763 60.000 3.32 0.00 33.59 5.19
96 97 1.699634 GATATGCACCCTCTGGCCTTA 59.300 52.381 3.32 0.00 33.59 2.69
97 98 1.131638 TATGCACCCTCTGGCCTTAG 58.868 55.000 3.32 0.34 33.59 2.18
114 115 5.470368 GCCTTAGCCTTCTTTTAAACTTGG 58.530 41.667 0.00 0.00 0.00 3.61
115 116 5.566826 GCCTTAGCCTTCTTTTAAACTTGGG 60.567 44.000 0.00 0.00 0.00 4.12
116 117 5.538813 CCTTAGCCTTCTTTTAAACTTGGGT 59.461 40.000 0.00 0.00 0.00 4.51
117 118 6.041637 CCTTAGCCTTCTTTTAAACTTGGGTT 59.958 38.462 5.97 0.58 37.24 4.11
118 119 5.276461 AGCCTTCTTTTAAACTTGGGTTG 57.724 39.130 0.00 0.00 35.63 3.77
119 120 4.959839 AGCCTTCTTTTAAACTTGGGTTGA 59.040 37.500 0.00 0.00 35.63 3.18
120 121 5.047847 GCCTTCTTTTAAACTTGGGTTGAC 58.952 41.667 0.00 0.00 35.63 3.18
121 122 5.163447 GCCTTCTTTTAAACTTGGGTTGACT 60.163 40.000 0.00 0.00 35.63 3.41
123 124 6.978659 CCTTCTTTTAAACTTGGGTTGACTTC 59.021 38.462 0.00 0.00 35.63 3.01
124 125 7.363443 CCTTCTTTTAAACTTGGGTTGACTTCA 60.363 37.037 0.00 0.00 35.63 3.02
125 126 6.859017 TCTTTTAAACTTGGGTTGACTTCAC 58.141 36.000 0.00 0.00 35.63 3.18
126 127 4.886247 TTAAACTTGGGTTGACTTCACG 57.114 40.909 0.00 0.00 35.63 4.35
127 128 2.413310 AACTTGGGTTGACTTCACGT 57.587 45.000 0.00 0.00 33.96 4.49
128 129 1.663695 ACTTGGGTTGACTTCACGTG 58.336 50.000 9.94 9.94 0.00 4.49
129 130 1.065709 ACTTGGGTTGACTTCACGTGT 60.066 47.619 16.51 0.00 0.00 4.49
131 132 0.179067 TGGGTTGACTTCACGTGTCC 60.179 55.000 16.51 7.66 33.83 4.02
133 134 0.179067 GGTTGACTTCACGTGTCCCA 60.179 55.000 16.51 6.99 33.83 4.37
134 135 1.542547 GGTTGACTTCACGTGTCCCAT 60.543 52.381 16.51 0.00 33.83 4.00
135 136 1.531149 GTTGACTTCACGTGTCCCATG 59.469 52.381 16.51 0.86 33.83 3.66
136 137 0.034756 TGACTTCACGTGTCCCATGG 59.965 55.000 16.51 4.14 33.83 3.66
137 138 0.320374 GACTTCACGTGTCCCATGGA 59.680 55.000 15.22 0.00 0.00 3.41
138 139 0.762418 ACTTCACGTGTCCCATGGAA 59.238 50.000 15.22 0.00 31.38 3.53
140 141 2.226330 CTTCACGTGTCCCATGGAAAA 58.774 47.619 15.22 0.00 31.38 2.29
141 142 2.577606 TCACGTGTCCCATGGAAAAT 57.422 45.000 15.22 0.00 31.38 1.82
143 144 4.022413 TCACGTGTCCCATGGAAAATAA 57.978 40.909 15.22 0.00 31.38 1.40
144 145 4.399219 TCACGTGTCCCATGGAAAATAAA 58.601 39.130 15.22 0.00 31.38 1.40
145 146 4.827835 TCACGTGTCCCATGGAAAATAAAA 59.172 37.500 15.22 0.00 31.38 1.52
146 147 5.302059 TCACGTGTCCCATGGAAAATAAAAA 59.698 36.000 15.22 0.00 31.38 1.94
147 148 5.404066 CACGTGTCCCATGGAAAATAAAAAC 59.596 40.000 15.22 0.00 31.38 2.43
149 150 5.279256 CGTGTCCCATGGAAAATAAAAACCT 60.279 40.000 15.22 0.00 31.38 3.50
150 151 6.530120 GTGTCCCATGGAAAATAAAAACCTT 58.470 36.000 15.22 0.00 31.38 3.50
151 152 7.524038 CGTGTCCCATGGAAAATAAAAACCTTA 60.524 37.037 15.22 0.00 31.38 2.69
152 153 7.817478 GTGTCCCATGGAAAATAAAAACCTTAG 59.183 37.037 15.22 0.00 31.38 2.18
153 154 7.038658 TGTCCCATGGAAAATAAAAACCTTAGG 60.039 37.037 15.22 0.00 31.38 2.69
154 155 7.020009 TCCCATGGAAAATAAAAACCTTAGGT 58.980 34.615 15.22 0.00 37.65 3.08
155 156 8.178132 TCCCATGGAAAATAAAAACCTTAGGTA 58.822 33.333 15.22 0.00 33.12 3.08
156 157 8.988060 CCCATGGAAAATAAAAACCTTAGGTAT 58.012 33.333 15.22 0.00 33.12 2.73
160 161 9.589461 TGGAAAATAAAAACCTTAGGTATGACA 57.411 29.630 3.55 0.00 33.12 3.58
194 195 7.672983 ATAGAACTGAAAAGAAATTCGCTCA 57.327 32.000 0.00 0.00 31.80 4.26
195 196 5.752712 AGAACTGAAAAGAAATTCGCTCAC 58.247 37.500 0.00 0.00 31.80 3.51
196 197 5.296780 AGAACTGAAAAGAAATTCGCTCACA 59.703 36.000 0.00 0.00 31.80 3.58
197 198 5.695851 ACTGAAAAGAAATTCGCTCACAT 57.304 34.783 0.00 0.00 31.80 3.21
198 199 6.801539 ACTGAAAAGAAATTCGCTCACATA 57.198 33.333 0.00 0.00 31.80 2.29
199 200 7.383102 ACTGAAAAGAAATTCGCTCACATAT 57.617 32.000 0.00 0.00 31.80 1.78
201 202 8.607459 ACTGAAAAGAAATTCGCTCACATATAG 58.393 33.333 0.00 0.00 31.80 1.31
202 203 7.919690 TGAAAAGAAATTCGCTCACATATAGG 58.080 34.615 0.00 0.00 31.80 2.57
203 204 5.931441 AAGAAATTCGCTCACATATAGGC 57.069 39.130 0.00 0.00 0.00 3.93
204 205 4.960938 AGAAATTCGCTCACATATAGGCA 58.039 39.130 0.00 0.00 0.00 4.75
206 207 6.000219 AGAAATTCGCTCACATATAGGCATT 59.000 36.000 0.00 0.00 0.00 3.56
207 208 6.488006 AGAAATTCGCTCACATATAGGCATTT 59.512 34.615 0.00 0.00 0.00 2.32
208 209 6.639632 AATTCGCTCACATATAGGCATTTT 57.360 33.333 0.00 0.00 0.00 1.82
209 210 5.673337 TTCGCTCACATATAGGCATTTTC 57.327 39.130 0.00 0.00 0.00 2.29
210 211 4.702831 TCGCTCACATATAGGCATTTTCA 58.297 39.130 0.00 0.00 0.00 2.69
211 212 5.308014 TCGCTCACATATAGGCATTTTCAT 58.692 37.500 0.00 0.00 0.00 2.57
212 213 6.463360 TCGCTCACATATAGGCATTTTCATA 58.537 36.000 0.00 0.00 0.00 2.15
213 214 6.934083 TCGCTCACATATAGGCATTTTCATAA 59.066 34.615 0.00 0.00 0.00 1.90
217 218 9.669353 CTCACATATAGGCATTTTCATAAACAC 57.331 33.333 0.00 0.00 0.00 3.32
218 219 8.341903 TCACATATAGGCATTTTCATAAACACG 58.658 33.333 0.00 0.00 0.00 4.49
219 220 8.128582 CACATATAGGCATTTTCATAAACACGT 58.871 33.333 0.00 0.00 0.00 4.49
221 222 6.751514 ATAGGCATTTTCATAAACACGTGA 57.248 33.333 25.01 0.00 0.00 4.35
222 223 5.643379 AGGCATTTTCATAAACACGTGAT 57.357 34.783 25.01 7.78 0.00 3.06
224 225 5.863397 AGGCATTTTCATAAACACGTGATTG 59.137 36.000 25.01 13.23 0.00 2.67
228 229 4.837896 TTCATAAACACGTGATTGGCAA 57.162 36.364 25.01 0.68 0.00 4.52
229 230 4.418013 TCATAAACACGTGATTGGCAAG 57.582 40.909 25.01 6.84 0.00 4.01
230 231 3.818210 TCATAAACACGTGATTGGCAAGT 59.182 39.130 25.01 0.00 39.90 3.16
233 234 1.653667 CACGTGATTGGCAAGTGCA 59.346 52.632 10.90 0.91 46.88 4.57
235 236 0.819259 ACGTGATTGGCAAGTGCACT 60.819 50.000 15.25 15.25 44.36 4.40
236 237 0.386352 CGTGATTGGCAAGTGCACTG 60.386 55.000 22.49 15.42 44.36 3.66
237 238 0.953727 GTGATTGGCAAGTGCACTGA 59.046 50.000 22.49 4.87 44.36 3.41
238 239 1.068748 GTGATTGGCAAGTGCACTGAG 60.069 52.381 22.49 17.28 44.36 3.35
239 240 1.242076 GATTGGCAAGTGCACTGAGT 58.758 50.000 22.49 0.84 44.36 3.41
240 241 2.224499 TGATTGGCAAGTGCACTGAGTA 60.224 45.455 22.49 5.02 44.36 2.59
241 242 2.340210 TTGGCAAGTGCACTGAGTAA 57.660 45.000 22.49 11.17 44.36 2.24
243 244 2.221169 TGGCAAGTGCACTGAGTAAAG 58.779 47.619 22.49 5.87 44.36 1.85
245 246 1.876156 GCAAGTGCACTGAGTAAAGCT 59.124 47.619 22.49 0.00 41.59 3.74
246 247 2.350197 GCAAGTGCACTGAGTAAAGCTG 60.350 50.000 22.49 12.49 41.59 4.24
247 248 2.874701 CAAGTGCACTGAGTAAAGCTGT 59.125 45.455 22.49 0.00 0.00 4.40
248 249 4.058124 CAAGTGCACTGAGTAAAGCTGTA 58.942 43.478 22.49 0.00 0.00 2.74
249 250 4.336889 AGTGCACTGAGTAAAGCTGTAA 57.663 40.909 20.97 0.00 0.00 2.41
250 251 4.058817 AGTGCACTGAGTAAAGCTGTAAC 58.941 43.478 20.97 0.00 0.00 2.50
251 252 4.058817 GTGCACTGAGTAAAGCTGTAACT 58.941 43.478 10.32 0.00 0.00 2.24
253 254 3.680458 GCACTGAGTAAAGCTGTAACTCC 59.320 47.826 16.50 2.79 39.10 3.85
256 257 4.532521 ACTGAGTAAAGCTGTAACTCCCAT 59.467 41.667 16.50 4.17 39.10 4.00
258 259 3.610911 AGTAAAGCTGTAACTCCCATGC 58.389 45.455 0.00 0.00 0.00 4.06
259 260 1.839424 AAAGCTGTAACTCCCATGCC 58.161 50.000 0.00 0.00 0.00 4.40
260 261 0.392998 AAGCTGTAACTCCCATGCCG 60.393 55.000 0.00 0.00 0.00 5.69
263 264 0.464373 CTGTAACTCCCATGCCGCAT 60.464 55.000 0.00 0.00 0.00 4.73
264 265 0.833949 TGTAACTCCCATGCCGCATA 59.166 50.000 5.31 0.00 0.00 3.14
266 267 2.294074 GTAACTCCCATGCCGCATAAA 58.706 47.619 5.31 0.00 0.00 1.40
267 268 1.846007 AACTCCCATGCCGCATAAAA 58.154 45.000 5.31 0.00 0.00 1.52
268 269 1.102978 ACTCCCATGCCGCATAAAAC 58.897 50.000 5.31 0.00 0.00 2.43
270 271 1.040339 TCCCATGCCGCATAAAACCC 61.040 55.000 5.31 0.00 0.00 4.11
271 272 1.326213 CCCATGCCGCATAAAACCCA 61.326 55.000 5.31 0.00 0.00 4.51
272 273 0.752054 CCATGCCGCATAAAACCCAT 59.248 50.000 5.31 0.00 0.00 4.00
273 274 1.269726 CCATGCCGCATAAAACCCATC 60.270 52.381 5.31 0.00 0.00 3.51
274 275 1.039856 ATGCCGCATAAAACCCATCC 58.960 50.000 3.36 0.00 0.00 3.51
275 276 0.323816 TGCCGCATAAAACCCATCCA 60.324 50.000 0.00 0.00 0.00 3.41
276 277 0.820871 GCCGCATAAAACCCATCCAA 59.179 50.000 0.00 0.00 0.00 3.53
277 278 1.205893 GCCGCATAAAACCCATCCAAA 59.794 47.619 0.00 0.00 0.00 3.28
278 279 2.158971 GCCGCATAAAACCCATCCAAAT 60.159 45.455 0.00 0.00 0.00 2.32
279 280 3.456280 CCGCATAAAACCCATCCAAATG 58.544 45.455 0.00 0.00 0.00 2.32
281 282 4.382470 CCGCATAAAACCCATCCAAATGAA 60.382 41.667 0.00 0.00 34.61 2.57
282 283 5.174395 CGCATAAAACCCATCCAAATGAAA 58.826 37.500 0.00 0.00 34.61 2.69
283 284 5.641209 CGCATAAAACCCATCCAAATGAAAA 59.359 36.000 0.00 0.00 34.61 2.29
285 286 7.474190 GCATAAAACCCATCCAAATGAAAATG 58.526 34.615 0.00 0.00 34.61 2.32
286 287 5.963176 AAAACCCATCCAAATGAAAATGC 57.037 34.783 0.00 0.00 34.61 3.56
287 288 4.637387 AACCCATCCAAATGAAAATGCA 57.363 36.364 0.00 0.00 34.61 3.96
288 289 4.637387 ACCCATCCAAATGAAAATGCAA 57.363 36.364 0.00 0.00 34.61 4.08
290 291 3.375922 CCCATCCAAATGAAAATGCAAGC 59.624 43.478 0.00 0.00 34.61 4.01
291 292 4.004314 CCATCCAAATGAAAATGCAAGCA 58.996 39.130 0.00 0.00 34.61 3.91
292 293 4.638421 CCATCCAAATGAAAATGCAAGCAT 59.362 37.500 0.86 0.86 34.95 3.79
295 296 5.306394 TCCAAATGAAAATGCAAGCATCAA 58.694 33.333 8.14 0.00 35.31 2.57
296 297 5.763698 TCCAAATGAAAATGCAAGCATCAAA 59.236 32.000 8.14 0.00 35.31 2.69
297 298 6.431543 TCCAAATGAAAATGCAAGCATCAAAT 59.568 30.769 8.14 0.00 35.31 2.32
298 299 7.606839 TCCAAATGAAAATGCAAGCATCAAATA 59.393 29.630 8.14 0.00 35.31 1.40
300 301 9.272901 CAAATGAAAATGCAAGCATCAAATAAG 57.727 29.630 8.14 0.00 35.31 1.73
301 302 8.780846 AATGAAAATGCAAGCATCAAATAAGA 57.219 26.923 8.14 0.00 35.31 2.10
302 303 8.958119 ATGAAAATGCAAGCATCAAATAAGAT 57.042 26.923 8.14 0.00 35.31 2.40
303 304 8.780846 TGAAAATGCAAGCATCAAATAAGATT 57.219 26.923 8.14 0.00 35.31 2.40
304 305 8.875803 TGAAAATGCAAGCATCAAATAAGATTC 58.124 29.630 8.14 3.72 35.31 2.52
305 306 8.780846 AAAATGCAAGCATCAAATAAGATTCA 57.219 26.923 8.14 0.00 35.31 2.57
306 307 8.958119 AAATGCAAGCATCAAATAAGATTCAT 57.042 26.923 8.14 0.00 35.31 2.57
307 308 8.958119 AATGCAAGCATCAAATAAGATTCATT 57.042 26.923 8.14 0.00 35.31 2.57
308 309 8.958119 ATGCAAGCATCAAATAAGATTCATTT 57.042 26.923 0.86 0.00 29.42 2.32
309 310 8.192068 TGCAAGCATCAAATAAGATTCATTTG 57.808 30.769 0.00 2.17 42.28 2.32
310 311 7.123830 GCAAGCATCAAATAAGATTCATTTGC 58.876 34.615 3.49 0.00 41.22 3.68
311 312 7.201574 GCAAGCATCAAATAAGATTCATTTGCA 60.202 33.333 3.49 0.00 41.22 4.08
312 313 7.766219 AGCATCAAATAAGATTCATTTGCAC 57.234 32.000 0.00 0.00 41.22 4.57
313 314 7.324935 AGCATCAAATAAGATTCATTTGCACA 58.675 30.769 0.00 0.00 41.22 4.57
314 315 7.820386 AGCATCAAATAAGATTCATTTGCACAA 59.180 29.630 0.00 0.00 41.22 3.33
315 316 8.609176 GCATCAAATAAGATTCATTTGCACAAT 58.391 29.630 0.00 0.00 41.22 2.71
316 317 9.914923 CATCAAATAAGATTCATTTGCACAATG 57.085 29.630 12.59 12.59 41.22 2.82
317 318 8.481974 TCAAATAAGATTCATTTGCACAATGG 57.518 30.769 16.44 4.43 41.22 3.16
318 319 7.549842 TCAAATAAGATTCATTTGCACAATGGG 59.450 33.333 16.44 0.00 41.22 4.00
319 320 3.255969 AGATTCATTTGCACAATGGGC 57.744 42.857 0.00 0.00 0.00 5.36
320 321 1.928503 GATTCATTTGCACAATGGGCG 59.071 47.619 1.97 0.00 0.00 6.13
321 322 0.964700 TTCATTTGCACAATGGGCGA 59.035 45.000 1.97 0.00 0.00 5.54
322 323 0.964700 TCATTTGCACAATGGGCGAA 59.035 45.000 13.11 13.11 38.89 4.70
323 324 1.067706 TCATTTGCACAATGGGCGAAG 60.068 47.619 15.98 8.17 38.01 3.79
324 325 1.067706 CATTTGCACAATGGGCGAAGA 60.068 47.619 15.98 0.00 38.01 2.87
325 326 1.255882 TTTGCACAATGGGCGAAGAT 58.744 45.000 5.96 0.00 31.26 2.40
326 327 2.121291 TTGCACAATGGGCGAAGATA 57.879 45.000 1.97 0.00 0.00 1.98
327 328 2.346766 TGCACAATGGGCGAAGATAT 57.653 45.000 1.97 0.00 0.00 1.63
328 329 2.221169 TGCACAATGGGCGAAGATATC 58.779 47.619 1.97 0.00 0.00 1.63
329 330 1.537202 GCACAATGGGCGAAGATATCC 59.463 52.381 0.00 0.00 0.00 2.59
330 331 2.154462 CACAATGGGCGAAGATATCCC 58.846 52.381 0.00 0.00 40.47 3.85
336 337 4.220693 TGGGCGAAGATATCCCATATTG 57.779 45.455 0.00 0.00 44.62 1.90
337 338 2.945668 GGGCGAAGATATCCCATATTGC 59.054 50.000 0.00 0.00 39.82 3.56
338 339 2.609459 GGCGAAGATATCCCATATTGCG 59.391 50.000 0.00 0.00 0.00 4.85
339 340 3.521560 GCGAAGATATCCCATATTGCGA 58.478 45.455 0.00 0.00 0.00 5.10
340 341 4.122776 GCGAAGATATCCCATATTGCGAT 58.877 43.478 0.00 0.00 0.00 4.58
341 342 4.210120 GCGAAGATATCCCATATTGCGATC 59.790 45.833 0.00 0.00 0.00 3.69
342 343 5.595885 CGAAGATATCCCATATTGCGATCT 58.404 41.667 0.00 0.00 0.00 2.75
343 344 6.735968 GCGAAGATATCCCATATTGCGATCTA 60.736 42.308 0.00 0.00 0.00 1.98
344 345 7.203218 CGAAGATATCCCATATTGCGATCTAA 58.797 38.462 0.00 0.00 0.00 2.10
345 346 7.869937 CGAAGATATCCCATATTGCGATCTAAT 59.130 37.037 0.00 0.00 0.00 1.73
346 347 8.899427 AAGATATCCCATATTGCGATCTAATG 57.101 34.615 0.00 0.00 0.00 1.90
347 348 8.027524 AGATATCCCATATTGCGATCTAATGT 57.972 34.615 0.00 0.00 0.00 2.71
348 349 8.489489 AGATATCCCATATTGCGATCTAATGTT 58.511 33.333 0.00 0.00 0.00 2.71
349 350 6.748333 ATCCCATATTGCGATCTAATGTTG 57.252 37.500 0.00 0.00 0.00 3.33
350 351 5.620206 TCCCATATTGCGATCTAATGTTGT 58.380 37.500 0.00 0.00 0.00 3.32
351 352 6.764379 TCCCATATTGCGATCTAATGTTGTA 58.236 36.000 0.00 0.00 0.00 2.41
352 353 7.220740 TCCCATATTGCGATCTAATGTTGTAA 58.779 34.615 0.00 0.00 0.00 2.41
353 354 7.882791 TCCCATATTGCGATCTAATGTTGTAAT 59.117 33.333 0.00 0.00 0.00 1.89
354 355 8.514594 CCCATATTGCGATCTAATGTTGTAATT 58.485 33.333 0.00 0.00 0.00 1.40
358 359 8.902540 ATTGCGATCTAATGTTGTAATTAGGA 57.097 30.769 4.58 0.00 39.57 2.94
359 360 8.725405 TTGCGATCTAATGTTGTAATTAGGAA 57.275 30.769 4.58 0.00 39.57 3.36
360 361 8.138365 TGCGATCTAATGTTGTAATTAGGAAC 57.862 34.615 4.58 0.00 39.57 3.62
363 364 8.814235 CGATCTAATGTTGTAATTAGGAACGTT 58.186 33.333 0.00 0.00 39.57 3.99
566 1499 1.160137 CCTCACGGCCTCTTCTTTTG 58.840 55.000 0.00 0.00 0.00 2.44
696 1654 6.058183 ACTCAACTAATTATCTCCATGCACC 58.942 40.000 0.00 0.00 0.00 5.01
1111 4407 0.321564 CAATGTCTTGCCAGGGACGA 60.322 55.000 0.00 0.00 35.45 4.20
1123 4419 2.173669 GGGACGATGCCATCACACG 61.174 63.158 5.40 0.00 0.00 4.49
1135 4431 2.298158 ATCACACGGCCGATCTCCAC 62.298 60.000 35.90 0.00 0.00 4.02
1147 4443 1.459455 ATCTCCACTCCATCTCGCCG 61.459 60.000 0.00 0.00 0.00 6.46
1170 4466 4.865761 GCCGTCGCAGCACCGATA 62.866 66.667 2.37 0.00 39.67 2.92
1171 4467 2.954868 CCGTCGCAGCACCGATAC 60.955 66.667 2.37 0.00 39.67 2.24
1207 4506 4.166011 GCCATCGCAGTGCCGAAC 62.166 66.667 10.11 1.62 41.01 3.95
1210 4509 2.507102 ATCGCAGTGCCGAACTCG 60.507 61.111 10.11 0.00 41.01 4.18
1211 4510 2.989881 ATCGCAGTGCCGAACTCGA 61.990 57.895 10.11 0.00 41.01 4.04
1221 4520 1.560923 CCGAACTCGACATCACCATC 58.439 55.000 0.00 0.00 43.02 3.51
1222 4521 1.135112 CCGAACTCGACATCACCATCA 60.135 52.381 0.00 0.00 43.02 3.07
1223 4522 2.481969 CCGAACTCGACATCACCATCAT 60.482 50.000 0.00 0.00 43.02 2.45
1224 4523 2.537214 CGAACTCGACATCACCATCATG 59.463 50.000 0.00 0.00 43.02 3.07
1225 4524 2.609427 ACTCGACATCACCATCATGG 57.391 50.000 0.54 0.54 45.02 3.66
1228 4527 1.210234 TCGACATCACCATCATGGCTT 59.790 47.619 2.52 0.00 42.67 4.35
1229 4528 1.600957 CGACATCACCATCATGGCTTC 59.399 52.381 2.52 0.00 42.67 3.86
1230 4529 2.646930 GACATCACCATCATGGCTTCA 58.353 47.619 2.52 0.00 42.67 3.02
1247 9296 4.927782 AACCACGCCTTCGCAGCA 62.928 61.111 0.00 0.00 39.84 4.41
1270 9319 1.675310 TCACCAAGCCATCTTGCCG 60.675 57.895 0.00 0.00 46.38 5.69
1456 9512 3.136123 GTGGCAGCATCGCACCAT 61.136 61.111 0.00 0.00 38.79 3.55
1537 9754 4.531912 TCATCTCGCGCCGACGTC 62.532 66.667 5.18 5.18 42.83 4.34
1558 9775 1.219124 CCACCTCACATGGAGTCCG 59.781 63.158 4.30 0.00 42.40 4.79
1559 9776 1.448540 CACCTCACATGGAGTCCGC 60.449 63.158 4.30 0.00 42.40 5.54
1560 9777 2.187946 CCTCACATGGAGTCCGCC 59.812 66.667 4.30 0.00 42.40 6.13
1876 10108 1.160137 CCTCACGGCCTCTTCTTTTG 58.840 55.000 0.00 0.00 0.00 2.44
1907 10140 7.367285 TCAAAGCAACACATTTATACAAGGAC 58.633 34.615 0.00 0.00 0.00 3.85
1908 10141 7.230510 TCAAAGCAACACATTTATACAAGGACT 59.769 33.333 0.00 0.00 0.00 3.85
1909 10142 7.524717 AAGCAACACATTTATACAAGGACTT 57.475 32.000 0.00 0.00 0.00 3.01
1910 10143 8.630054 AAGCAACACATTTATACAAGGACTTA 57.370 30.769 0.00 0.00 0.00 2.24
1913 10146 7.472543 CAACACATTTATACAAGGACTTAGGC 58.527 38.462 0.00 0.00 0.00 3.93
1914 10147 6.717289 ACACATTTATACAAGGACTTAGGCA 58.283 36.000 0.00 0.00 0.00 4.75
1915 10148 6.823689 ACACATTTATACAAGGACTTAGGCAG 59.176 38.462 0.00 0.00 0.00 4.85
1916 10149 5.823045 ACATTTATACAAGGACTTAGGCAGC 59.177 40.000 0.00 0.00 0.00 5.25
1917 10150 4.417426 TTATACAAGGACTTAGGCAGCC 57.583 45.455 1.84 1.84 0.00 4.85
1919 10152 1.133809 ACAAGGACTTAGGCAGCCCA 61.134 55.000 8.22 0.00 0.00 5.36
1920 10153 0.678048 CAAGGACTTAGGCAGCCCAC 60.678 60.000 8.22 0.00 0.00 4.61
1921 10154 1.853250 AAGGACTTAGGCAGCCCACC 61.853 60.000 8.22 4.85 0.00 4.61
1922 10155 2.602676 GGACTTAGGCAGCCCACCA 61.603 63.158 8.22 0.00 0.00 4.17
1924 10157 2.436646 CTTAGGCAGCCCACCACG 60.437 66.667 8.22 0.00 0.00 4.94
1925 10158 4.715523 TTAGGCAGCCCACCACGC 62.716 66.667 8.22 0.00 0.00 5.34
1935 10168 4.602259 CACCACGCACGTCCACCT 62.602 66.667 0.00 0.00 0.00 4.00
1936 10169 4.295119 ACCACGCACGTCCACCTC 62.295 66.667 0.00 0.00 0.00 3.85
1938 10171 3.991051 CACGCACGTCCACCTCCT 61.991 66.667 0.00 0.00 0.00 3.69
1939 10172 3.991051 ACGCACGTCCACCTCCTG 61.991 66.667 0.00 0.00 0.00 3.86
1940 10173 4.742201 CGCACGTCCACCTCCTGG 62.742 72.222 0.00 0.00 42.29 4.45
1947 10180 3.313874 CCACCTCCTGGAATCGCT 58.686 61.111 0.00 0.00 43.95 4.93
1948 10181 1.144936 CCACCTCCTGGAATCGCTC 59.855 63.158 0.00 0.00 43.95 5.03
1949 10182 1.144936 CACCTCCTGGAATCGCTCC 59.855 63.158 0.00 0.00 45.64 4.70
1957 10190 3.056628 GGAATCGCTCCACACAGAG 57.943 57.895 0.00 0.00 44.67 3.35
1958 10191 0.460987 GGAATCGCTCCACACAGAGG 60.461 60.000 0.00 0.00 44.67 3.69
1959 10192 0.532573 GAATCGCTCCACACAGAGGA 59.467 55.000 0.00 0.00 34.26 3.71
1960 10193 1.137872 GAATCGCTCCACACAGAGGAT 59.862 52.381 0.00 0.00 33.99 3.24
1961 10194 2.073252 ATCGCTCCACACAGAGGATA 57.927 50.000 0.00 0.00 33.99 2.59
1962 10195 1.847328 TCGCTCCACACAGAGGATAA 58.153 50.000 0.00 0.00 33.99 1.75
1963 10196 2.388735 TCGCTCCACACAGAGGATAAT 58.611 47.619 0.00 0.00 33.99 1.28
1964 10197 2.766263 TCGCTCCACACAGAGGATAATT 59.234 45.455 0.00 0.00 33.99 1.40
1965 10198 3.126831 CGCTCCACACAGAGGATAATTC 58.873 50.000 0.00 0.00 33.99 2.17
1966 10199 3.126831 GCTCCACACAGAGGATAATTCG 58.873 50.000 0.00 0.00 33.99 3.34
1967 10200 3.722147 CTCCACACAGAGGATAATTCGG 58.278 50.000 0.00 0.00 33.99 4.30
1968 10201 3.104512 TCCACACAGAGGATAATTCGGT 58.895 45.455 0.00 0.00 0.00 4.69
1969 10202 3.517901 TCCACACAGAGGATAATTCGGTT 59.482 43.478 0.00 0.00 0.00 4.44
1970 10203 3.623060 CCACACAGAGGATAATTCGGTTG 59.377 47.826 0.00 0.00 0.00 3.77
1971 10204 3.623060 CACACAGAGGATAATTCGGTTGG 59.377 47.826 0.00 0.00 0.00 3.77
1972 10205 2.614057 CACAGAGGATAATTCGGTTGGC 59.386 50.000 0.00 0.00 0.00 4.52
1973 10206 2.222027 CAGAGGATAATTCGGTTGGCC 58.778 52.381 0.00 0.00 0.00 5.36
1983 10216 3.976758 GGTTGGCCGTCCACTAAC 58.023 61.111 10.62 1.53 43.33 2.34
1984 10217 1.373812 GGTTGGCCGTCCACTAACT 59.626 57.895 10.62 0.00 43.33 2.24
1985 10218 0.672711 GGTTGGCCGTCCACTAACTC 60.673 60.000 10.62 0.00 43.33 3.01
1986 10219 0.034337 GTTGGCCGTCCACTAACTCA 59.966 55.000 0.00 0.00 43.33 3.41
1987 10220 0.759959 TTGGCCGTCCACTAACTCAA 59.240 50.000 0.00 0.00 43.33 3.02
1988 10221 0.034337 TGGCCGTCCACTAACTCAAC 59.966 55.000 0.00 0.00 37.47 3.18
1989 10222 0.320697 GGCCGTCCACTAACTCAACT 59.679 55.000 0.00 0.00 0.00 3.16
1990 10223 1.547372 GGCCGTCCACTAACTCAACTA 59.453 52.381 0.00 0.00 0.00 2.24
1991 10224 2.028748 GGCCGTCCACTAACTCAACTAA 60.029 50.000 0.00 0.00 0.00 2.24
1992 10225 3.369157 GGCCGTCCACTAACTCAACTAAT 60.369 47.826 0.00 0.00 0.00 1.73
1993 10226 4.251268 GCCGTCCACTAACTCAACTAATT 58.749 43.478 0.00 0.00 0.00 1.40
1994 10227 5.413499 GCCGTCCACTAACTCAACTAATTA 58.587 41.667 0.00 0.00 0.00 1.40
1995 10228 6.047231 GCCGTCCACTAACTCAACTAATTAT 58.953 40.000 0.00 0.00 0.00 1.28
1996 10229 6.200475 GCCGTCCACTAACTCAACTAATTATC 59.800 42.308 0.00 0.00 0.00 1.75
1997 10230 7.490000 CCGTCCACTAACTCAACTAATTATCT 58.510 38.462 0.00 0.00 0.00 1.98
1998 10231 7.648510 CCGTCCACTAACTCAACTAATTATCTC 59.351 40.741 0.00 0.00 0.00 2.75
1999 10232 7.648510 CGTCCACTAACTCAACTAATTATCTCC 59.351 40.741 0.00 0.00 0.00 3.71
2000 10233 8.475639 GTCCACTAACTCAACTAATTATCTCCA 58.524 37.037 0.00 0.00 0.00 3.86
2001 10234 9.213777 TCCACTAACTCAACTAATTATCTCCAT 57.786 33.333 0.00 0.00 0.00 3.41
2002 10235 9.265901 CCACTAACTCAACTAATTATCTCCATG 57.734 37.037 0.00 0.00 0.00 3.66
2003 10236 8.768955 CACTAACTCAACTAATTATCTCCATGC 58.231 37.037 0.00 0.00 0.00 4.06
2004 10237 8.486210 ACTAACTCAACTAATTATCTCCATGCA 58.514 33.333 0.00 0.00 0.00 3.96
2005 10238 7.559590 AACTCAACTAATTATCTCCATGCAC 57.440 36.000 0.00 0.00 0.00 4.57
2006 10239 6.058183 ACTCAACTAATTATCTCCATGCACC 58.942 40.000 0.00 0.00 0.00 5.01
2007 10240 6.000246 TCAACTAATTATCTCCATGCACCA 58.000 37.500 0.00 0.00 0.00 4.17
2008 10241 6.422333 TCAACTAATTATCTCCATGCACCAA 58.578 36.000 0.00 0.00 0.00 3.67
2009 10242 6.318648 TCAACTAATTATCTCCATGCACCAAC 59.681 38.462 0.00 0.00 0.00 3.77
2010 10243 6.006275 ACTAATTATCTCCATGCACCAACT 57.994 37.500 0.00 0.00 0.00 3.16
2011 10244 7.136822 ACTAATTATCTCCATGCACCAACTA 57.863 36.000 0.00 0.00 0.00 2.24
2012 10245 6.992715 ACTAATTATCTCCATGCACCAACTAC 59.007 38.462 0.00 0.00 0.00 2.73
2013 10246 2.717639 ATCTCCATGCACCAACTACC 57.282 50.000 0.00 0.00 0.00 3.18
2014 10247 0.618458 TCTCCATGCACCAACTACCC 59.382 55.000 0.00 0.00 0.00 3.69
2015 10248 0.327924 CTCCATGCACCAACTACCCA 59.672 55.000 0.00 0.00 0.00 4.51
2016 10249 0.037590 TCCATGCACCAACTACCCAC 59.962 55.000 0.00 0.00 0.00 4.61
2017 10250 0.038166 CCATGCACCAACTACCCACT 59.962 55.000 0.00 0.00 0.00 4.00
2018 10251 1.167851 CATGCACCAACTACCCACTG 58.832 55.000 0.00 0.00 0.00 3.66
2019 10252 0.609131 ATGCACCAACTACCCACTGC 60.609 55.000 0.00 0.00 0.00 4.40
2020 10253 1.228124 GCACCAACTACCCACTGCA 60.228 57.895 0.00 0.00 0.00 4.41
2021 10254 0.609131 GCACCAACTACCCACTGCAT 60.609 55.000 0.00 0.00 0.00 3.96
2022 10255 1.167851 CACCAACTACCCACTGCATG 58.832 55.000 0.00 0.00 0.00 4.06
2023 10256 0.609131 ACCAACTACCCACTGCATGC 60.609 55.000 11.82 11.82 0.00 4.06
2024 10257 1.647545 CCAACTACCCACTGCATGCG 61.648 60.000 14.09 10.50 0.00 4.73
2025 10258 0.955428 CAACTACCCACTGCATGCGT 60.955 55.000 14.09 11.19 0.00 5.24
2026 10259 0.955428 AACTACCCACTGCATGCGTG 60.955 55.000 25.71 25.71 0.00 5.34
2027 10260 1.375908 CTACCCACTGCATGCGTGT 60.376 57.895 28.23 20.71 0.00 4.49
2028 10261 1.638388 CTACCCACTGCATGCGTGTG 61.638 60.000 28.23 27.48 0.00 3.82
2029 10262 4.409218 CCCACTGCATGCGTGTGC 62.409 66.667 27.64 4.66 45.25 4.57
2049 10282 1.068748 CAACATTGACTCAGCAGCCAC 60.069 52.381 0.00 0.00 0.00 5.01
2050 10283 0.109153 ACATTGACTCAGCAGCCACA 59.891 50.000 0.00 0.00 0.00 4.17
2053 10286 2.026945 TTGACTCAGCAGCCACACGA 62.027 55.000 0.00 0.00 0.00 4.35
2055 10288 2.740055 CTCAGCAGCCACACGACC 60.740 66.667 0.00 0.00 0.00 4.79
2058 10291 3.640407 AGCAGCCACACGACCCAT 61.640 61.111 0.00 0.00 0.00 4.00
2059 10292 3.434319 GCAGCCACACGACCCATG 61.434 66.667 0.00 0.00 0.00 3.66
2061 10294 3.952508 AGCCACACGACCCATGCA 61.953 61.111 0.00 0.00 0.00 3.96
2062 10295 2.751436 GCCACACGACCCATGCAT 60.751 61.111 0.00 0.00 0.00 3.96
2063 10296 3.055080 GCCACACGACCCATGCATG 62.055 63.158 20.19 20.19 0.00 4.06
2064 10297 2.486504 CACACGACCCATGCATGC 59.513 61.111 21.69 11.82 0.00 4.06
2069 10302 2.887360 GACCCATGCATGCACACC 59.113 61.111 25.37 7.08 0.00 4.16
2073 10306 1.444724 CCATGCATGCACACCAACG 60.445 57.895 25.37 5.46 0.00 4.10
2074 10307 1.580437 CATGCATGCACACCAACGA 59.420 52.632 25.37 0.00 0.00 3.85
2081 10314 2.319136 TGCACACCAACGAACTAACT 57.681 45.000 0.00 0.00 0.00 2.24
2082 10315 3.455990 TGCACACCAACGAACTAACTA 57.544 42.857 0.00 0.00 0.00 2.24
2083 10316 3.386486 TGCACACCAACGAACTAACTAG 58.614 45.455 0.00 0.00 0.00 2.57
2084 10317 2.157085 GCACACCAACGAACTAACTAGC 59.843 50.000 0.00 0.00 0.00 3.42
2085 10318 3.386486 CACACCAACGAACTAACTAGCA 58.614 45.455 0.00 0.00 0.00 3.49
2089 10322 2.735134 CCAACGAACTAACTAGCACACC 59.265 50.000 0.00 0.00 0.00 4.16
2090 10323 2.342910 ACGAACTAACTAGCACACCG 57.657 50.000 0.00 0.00 0.00 4.94
2092 10325 2.294233 ACGAACTAACTAGCACACCGAA 59.706 45.455 0.00 0.00 0.00 4.30
2093 10326 3.057033 ACGAACTAACTAGCACACCGAAT 60.057 43.478 0.00 0.00 0.00 3.34
2095 10328 4.674623 CGAACTAACTAGCACACCGAATCT 60.675 45.833 0.00 0.00 0.00 2.40
2098 10331 3.963428 AACTAGCACACCGAATCTCTT 57.037 42.857 0.00 0.00 0.00 2.85
2099 10332 3.238108 ACTAGCACACCGAATCTCTTG 57.762 47.619 0.00 0.00 0.00 3.02
2100 10333 2.093973 ACTAGCACACCGAATCTCTTGG 60.094 50.000 0.00 0.00 0.00 3.61
2102 10335 0.674895 GCACACCGAATCTCTTGGCT 60.675 55.000 0.00 0.00 0.00 4.75
2103 10336 1.363744 CACACCGAATCTCTTGGCTC 58.636 55.000 0.00 0.00 0.00 4.70
2104 10337 0.250513 ACACCGAATCTCTTGGCTCC 59.749 55.000 0.00 0.00 0.00 4.70
2105 10338 0.250234 CACCGAATCTCTTGGCTCCA 59.750 55.000 0.00 0.00 0.00 3.86
2106 10339 0.984230 ACCGAATCTCTTGGCTCCAA 59.016 50.000 0.95 0.95 0.00 3.53
2107 10340 1.561542 ACCGAATCTCTTGGCTCCAAT 59.438 47.619 1.30 0.00 35.20 3.16
2108 10341 2.216898 CCGAATCTCTTGGCTCCAATC 58.783 52.381 1.30 0.00 35.20 2.67
2110 10343 2.420547 CGAATCTCTTGGCTCCAATCCA 60.421 50.000 1.30 0.00 35.20 3.41
2111 10344 3.212685 GAATCTCTTGGCTCCAATCCAG 58.787 50.000 1.30 0.00 35.20 3.86
2112 10345 0.254178 TCTCTTGGCTCCAATCCAGC 59.746 55.000 1.30 0.00 35.20 4.85
2113 10346 0.255318 CTCTTGGCTCCAATCCAGCT 59.745 55.000 1.30 0.00 37.05 4.24
2115 10348 1.915489 TCTTGGCTCCAATCCAGCTAA 59.085 47.619 1.30 0.00 35.21 3.09
2116 10349 2.019984 CTTGGCTCCAATCCAGCTAAC 58.980 52.381 1.30 0.00 32.87 2.34
2117 10350 0.255890 TGGCTCCAATCCAGCTAACC 59.744 55.000 0.00 0.00 37.05 2.85
2118 10351 0.466372 GGCTCCAATCCAGCTAACCC 60.466 60.000 0.00 0.00 37.05 4.11
2120 10353 1.133668 GCTCCAATCCAGCTAACCCAT 60.134 52.381 0.00 0.00 33.75 4.00
2121 10354 2.687914 GCTCCAATCCAGCTAACCCATT 60.688 50.000 0.00 0.00 33.75 3.16
2122 10355 3.217626 CTCCAATCCAGCTAACCCATTC 58.782 50.000 0.00 0.00 0.00 2.67
2123 10356 2.580322 TCCAATCCAGCTAACCCATTCA 59.420 45.455 0.00 0.00 0.00 2.57
2124 10357 2.954318 CCAATCCAGCTAACCCATTCAG 59.046 50.000 0.00 0.00 0.00 3.02
2125 10358 2.355010 ATCCAGCTAACCCATTCAGC 57.645 50.000 0.00 0.00 35.49 4.26
2127 10360 1.097547 CCAGCTAACCCATTCAGCCG 61.098 60.000 0.00 0.00 35.88 5.52
2128 10361 1.097547 CAGCTAACCCATTCAGCCGG 61.098 60.000 0.00 0.00 35.88 6.13
2129 10362 1.077716 GCTAACCCATTCAGCCGGT 60.078 57.895 1.90 0.00 0.00 5.28
2131 10364 0.541863 CTAACCCATTCAGCCGGTCT 59.458 55.000 1.90 0.00 0.00 3.85
2133 10366 2.124570 CCCATTCAGCCGGTCTGG 60.125 66.667 20.90 12.54 43.06 3.86
2142 10375 4.003788 CCGGTCTGGCTCCAACGT 62.004 66.667 0.00 0.00 0.00 3.99
2143 10376 2.738521 CGGTCTGGCTCCAACGTG 60.739 66.667 0.00 0.00 0.00 4.49
2147 10566 3.052082 CTGGCTCCAACGTGCCTG 61.052 66.667 14.90 10.92 46.77 4.85
2149 10568 4.643387 GGCTCCAACGTGCCTGGT 62.643 66.667 7.35 0.00 43.90 4.00
2185 10620 4.450122 CGCATCGCACAGCACCAC 62.450 66.667 0.00 0.00 0.00 4.16
2186 10621 3.356267 GCATCGCACAGCACCACA 61.356 61.111 0.00 0.00 0.00 4.17
2196 10631 2.046892 GCACCACAGGCATCTCGT 60.047 61.111 0.00 0.00 0.00 4.18
2198 10633 1.807165 CACCACAGGCATCTCGTCG 60.807 63.158 0.00 0.00 0.00 5.12
2200 10635 0.963856 ACCACAGGCATCTCGTCGTA 60.964 55.000 0.00 0.00 0.00 3.43
2201 10636 0.525668 CCACAGGCATCTCGTCGTAC 60.526 60.000 0.00 0.00 0.00 3.67
2205 10640 1.654743 GGCATCTCGTCGTACTCGC 60.655 63.158 0.00 0.00 36.96 5.03
2208 10643 3.165670 ATCTCGTCGTACTCGCCGC 62.166 63.158 0.00 0.00 38.31 6.53
2212 10647 3.017314 GTCGTACTCGCCGCATCG 61.017 66.667 0.00 0.00 36.96 3.84
2216 10651 4.123009 TACTCGCCGCATCGCACA 62.123 61.111 0.00 0.00 0.00 4.57
2225 10660 3.057548 CATCGCACAGCAGCCCAA 61.058 61.111 0.00 0.00 0.00 4.12
2233 10668 1.078918 CAGCAGCCCAACATCTCGA 60.079 57.895 0.00 0.00 0.00 4.04
2239 10674 1.625818 AGCCCAACATCTCGACTTCTT 59.374 47.619 0.00 0.00 0.00 2.52
2248 10683 3.065015 CGACTTCTTCGCGCACTC 58.935 61.111 8.75 0.00 41.87 3.51
2249 10684 1.729484 CGACTTCTTCGCGCACTCA 60.729 57.895 8.75 0.00 41.87 3.41
2250 10685 1.275471 CGACTTCTTCGCGCACTCAA 61.275 55.000 8.75 0.00 41.87 3.02
2251 10686 0.161870 GACTTCTTCGCGCACTCAAC 59.838 55.000 8.75 0.00 0.00 3.18
2253 10688 1.901650 CTTCTTCGCGCACTCAACCC 61.902 60.000 8.75 0.00 0.00 4.11
2254 10689 2.652382 TTCTTCGCGCACTCAACCCA 62.652 55.000 8.75 0.00 0.00 4.51
2256 10691 2.175184 CTTCGCGCACTCAACCCAAG 62.175 60.000 8.75 0.00 0.00 3.61
2257 10692 4.389576 CGCGCACTCAACCCAAGC 62.390 66.667 8.75 0.00 0.00 4.01
2258 10693 2.980233 GCGCACTCAACCCAAGCT 60.980 61.111 0.30 0.00 0.00 3.74
2260 10695 1.576421 CGCACTCAACCCAAGCTTC 59.424 57.895 0.00 0.00 0.00 3.86
2261 10696 0.886490 CGCACTCAACCCAAGCTTCT 60.886 55.000 0.00 0.00 0.00 2.85
2262 10697 0.595095 GCACTCAACCCAAGCTTCTG 59.405 55.000 0.00 0.00 0.00 3.02
2264 10699 0.886490 ACTCAACCCAAGCTTCTGCG 60.886 55.000 0.00 0.00 45.42 5.18
2280 10718 3.325902 GCGGCTAGCTACTCCTAGA 57.674 57.895 15.72 0.00 44.04 2.43
2282 10720 1.525941 CGGCTAGCTACTCCTAGACC 58.474 60.000 15.72 0.00 39.78 3.85
2285 10723 2.823154 GGCTAGCTACTCCTAGACCATG 59.177 54.545 15.72 0.00 37.46 3.66
2292 10730 4.321601 GCTACTCCTAGACCATGCTACATG 60.322 50.000 0.48 0.48 0.00 3.21
2329 10771 7.922837 CAAACTATGCAGATACATGAACATGA 58.077 34.615 19.56 5.79 41.20 3.07
2347 10789 8.564574 TGAACATGACAAGATTAAACCTAACAC 58.435 33.333 0.00 0.00 0.00 3.32
2348 10790 7.129109 ACATGACAAGATTAAACCTAACACG 57.871 36.000 0.00 0.00 0.00 4.49
2351 10793 7.556733 TGACAAGATTAAACCTAACACGTTT 57.443 32.000 0.00 0.00 37.25 3.60
2352 10794 7.987649 TGACAAGATTAAACCTAACACGTTTT 58.012 30.769 0.00 0.00 35.19 2.43
2355 10797 9.328845 ACAAGATTAAACCTAACACGTTTTCTA 57.671 29.630 0.00 0.00 35.19 2.10
2359 10801 9.968743 GATTAAACCTAACACGTTTTCTATGAG 57.031 33.333 0.00 0.00 35.19 2.90
2360 10802 9.715121 ATTAAACCTAACACGTTTTCTATGAGA 57.285 29.630 0.00 0.00 35.19 3.27
2361 10803 9.715121 TTAAACCTAACACGTTTTCTATGAGAT 57.285 29.630 0.00 0.00 35.19 2.75
2364 10806 8.252964 ACCTAACACGTTTTCTATGAGATTTC 57.747 34.615 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.933330 TCCGTTAATGTCATACAGAGAGC 58.067 43.478 0.00 0.00 0.00 4.09
3 4 7.327275 GCTAATCCGTTAATGTCATACAGAGAG 59.673 40.741 0.00 0.00 0.00 3.20
5 6 6.366332 GGCTAATCCGTTAATGTCATACAGAG 59.634 42.308 0.00 0.00 0.00 3.35
8 9 5.919755 TGGCTAATCCGTTAATGTCATACA 58.080 37.500 0.00 0.00 37.80 2.29
9 10 6.854496 TTGGCTAATCCGTTAATGTCATAC 57.146 37.500 0.00 0.00 37.80 2.39
10 11 8.458573 AATTTGGCTAATCCGTTAATGTCATA 57.541 30.769 0.00 0.00 37.80 2.15
13 14 6.791303 TGAATTTGGCTAATCCGTTAATGTC 58.209 36.000 0.00 0.00 37.80 3.06
14 15 6.767524 TGAATTTGGCTAATCCGTTAATGT 57.232 33.333 0.00 0.00 37.80 2.71
16 17 9.131791 ACTAATGAATTTGGCTAATCCGTTAAT 57.868 29.630 0.00 0.00 37.80 1.40
17 18 8.514330 ACTAATGAATTTGGCTAATCCGTTAA 57.486 30.769 0.00 0.00 37.80 2.01
18 19 8.402472 CAACTAATGAATTTGGCTAATCCGTTA 58.598 33.333 0.00 0.00 37.80 3.18
21 22 6.208644 CCAACTAATGAATTTGGCTAATCCG 58.791 40.000 0.00 0.00 37.80 4.18
32 33 1.750778 CCGGCAGCCAACTAATGAATT 59.249 47.619 13.30 0.00 0.00 2.17
33 34 1.392589 CCGGCAGCCAACTAATGAAT 58.607 50.000 13.30 0.00 0.00 2.57
35 36 1.748879 GCCGGCAGCCAACTAATGA 60.749 57.895 24.80 0.00 34.35 2.57
36 37 1.315257 AAGCCGGCAGCCAACTAATG 61.315 55.000 31.54 0.00 45.47 1.90
37 38 0.611896 AAAGCCGGCAGCCAACTAAT 60.612 50.000 31.54 0.00 45.47 1.73
38 39 1.228429 AAAGCCGGCAGCCAACTAA 60.228 52.632 31.54 0.00 45.47 2.24
39 40 1.971167 CAAAGCCGGCAGCCAACTA 60.971 57.895 31.54 0.00 45.47 2.24
40 41 3.297620 CAAAGCCGGCAGCCAACT 61.298 61.111 31.54 1.71 45.47 3.16
42 43 3.604667 CACAAAGCCGGCAGCCAA 61.605 61.111 31.54 0.00 45.47 4.52
47 48 3.121406 TACCACCACAAAGCCGGCA 62.121 57.895 31.54 0.00 0.00 5.69
49 50 2.332654 GCTACCACCACAAAGCCGG 61.333 63.158 0.00 0.00 0.00 6.13
52 53 0.313987 GGTTGCTACCACCACAAAGC 59.686 55.000 12.79 0.00 44.36 3.51
75 76 1.302033 GGCCAGAGGGTGCATATCG 60.302 63.158 0.00 0.00 36.17 2.92
76 77 0.475906 AAGGCCAGAGGGTGCATATC 59.524 55.000 5.01 0.00 36.17 1.63
77 78 1.701847 CTAAGGCCAGAGGGTGCATAT 59.298 52.381 5.01 0.00 36.17 1.78
79 80 1.918253 CTAAGGCCAGAGGGTGCAT 59.082 57.895 5.01 0.00 36.17 3.96
80 81 2.971598 GCTAAGGCCAGAGGGTGCA 61.972 63.158 5.01 0.00 36.17 4.57
81 82 2.124529 GCTAAGGCCAGAGGGTGC 60.125 66.667 5.01 0.00 36.17 5.01
93 94 6.650427 ACCCAAGTTTAAAAGAAGGCTAAG 57.350 37.500 0.00 0.00 0.00 2.18
94 95 6.608002 TCAACCCAAGTTTAAAAGAAGGCTAA 59.392 34.615 0.00 0.00 32.45 3.09
96 97 4.959839 TCAACCCAAGTTTAAAAGAAGGCT 59.040 37.500 0.00 0.00 32.45 4.58
97 98 5.047847 GTCAACCCAAGTTTAAAAGAAGGC 58.952 41.667 0.00 0.00 32.45 4.35
99 100 7.488150 GTGAAGTCAACCCAAGTTTAAAAGAAG 59.512 37.037 0.00 0.00 32.45 2.85
100 101 7.317390 GTGAAGTCAACCCAAGTTTAAAAGAA 58.683 34.615 0.00 0.00 32.45 2.52
101 102 6.403855 CGTGAAGTCAACCCAAGTTTAAAAGA 60.404 38.462 0.00 0.00 32.45 2.52
104 105 4.701171 ACGTGAAGTCAACCCAAGTTTAAA 59.299 37.500 0.00 0.00 32.45 1.52
105 106 4.095185 CACGTGAAGTCAACCCAAGTTTAA 59.905 41.667 10.90 0.00 32.45 1.52
106 107 3.623960 CACGTGAAGTCAACCCAAGTTTA 59.376 43.478 10.90 0.00 32.45 2.01
107 108 2.422127 CACGTGAAGTCAACCCAAGTTT 59.578 45.455 10.90 0.00 32.45 2.66
109 110 1.065709 ACACGTGAAGTCAACCCAAGT 60.066 47.619 25.01 0.00 0.00 3.16
111 112 1.658994 GACACGTGAAGTCAACCCAA 58.341 50.000 25.01 0.00 36.06 4.12
112 113 0.179067 GGACACGTGAAGTCAACCCA 60.179 55.000 25.01 0.00 37.74 4.51
113 114 0.883370 GGGACACGTGAAGTCAACCC 60.883 60.000 25.01 16.91 37.74 4.11
114 115 0.179067 TGGGACACGTGAAGTCAACC 60.179 55.000 25.01 12.78 37.74 3.77
115 116 3.372795 TGGGACACGTGAAGTCAAC 57.627 52.632 25.01 7.06 37.74 3.18
128 129 7.038587 ACCTAAGGTTTTTATTTTCCATGGGAC 60.039 37.037 13.02 0.00 27.29 4.46
129 130 7.020009 ACCTAAGGTTTTTATTTTCCATGGGA 58.980 34.615 13.02 0.00 27.29 4.37
131 132 9.816354 CATACCTAAGGTTTTTATTTTCCATGG 57.184 33.333 4.97 4.97 37.09 3.66
134 135 9.589461 TGTCATACCTAAGGTTTTTATTTTCCA 57.411 29.630 0.00 0.00 37.09 3.53
168 169 9.383519 TGAGCGAATTTCTTTTCAGTTCTATAT 57.616 29.630 0.00 0.00 0.00 0.86
169 170 8.656849 GTGAGCGAATTTCTTTTCAGTTCTATA 58.343 33.333 0.00 0.00 0.00 1.31
172 173 5.296780 TGTGAGCGAATTTCTTTTCAGTTCT 59.703 36.000 0.00 0.00 0.00 3.01
173 174 5.510671 TGTGAGCGAATTTCTTTTCAGTTC 58.489 37.500 0.00 0.00 0.00 3.01
174 175 5.499139 TGTGAGCGAATTTCTTTTCAGTT 57.501 34.783 0.00 0.00 0.00 3.16
175 176 5.695851 ATGTGAGCGAATTTCTTTTCAGT 57.304 34.783 0.00 0.00 0.00 3.41
179 180 6.318648 TGCCTATATGTGAGCGAATTTCTTTT 59.681 34.615 0.00 0.00 0.00 2.27
182 183 4.960938 TGCCTATATGTGAGCGAATTTCT 58.039 39.130 0.00 0.00 0.00 2.52
183 184 5.869753 ATGCCTATATGTGAGCGAATTTC 57.130 39.130 0.00 0.00 0.00 2.17
184 185 6.639632 AAATGCCTATATGTGAGCGAATTT 57.360 33.333 0.00 0.00 0.00 1.82
185 186 6.262944 TGAAAATGCCTATATGTGAGCGAATT 59.737 34.615 0.00 0.00 0.00 2.17
186 187 5.764686 TGAAAATGCCTATATGTGAGCGAAT 59.235 36.000 0.00 0.00 0.00 3.34
189 190 5.618056 ATGAAAATGCCTATATGTGAGCG 57.382 39.130 0.00 0.00 0.00 5.03
191 192 9.669353 GTGTTTATGAAAATGCCTATATGTGAG 57.331 33.333 0.00 0.00 0.00 3.51
193 194 8.128582 ACGTGTTTATGAAAATGCCTATATGTG 58.871 33.333 0.00 0.00 0.00 3.21
194 195 8.128582 CACGTGTTTATGAAAATGCCTATATGT 58.871 33.333 7.58 0.00 0.00 2.29
195 196 8.341903 TCACGTGTTTATGAAAATGCCTATATG 58.658 33.333 16.51 0.00 0.00 1.78
196 197 8.445275 TCACGTGTTTATGAAAATGCCTATAT 57.555 30.769 16.51 0.00 0.00 0.86
197 198 7.851387 TCACGTGTTTATGAAAATGCCTATA 57.149 32.000 16.51 0.00 0.00 1.31
198 199 6.751514 TCACGTGTTTATGAAAATGCCTAT 57.248 33.333 16.51 0.00 0.00 2.57
199 200 6.751514 ATCACGTGTTTATGAAAATGCCTA 57.248 33.333 16.51 0.00 0.00 3.93
201 202 5.062058 CCAATCACGTGTTTATGAAAATGCC 59.938 40.000 16.51 0.00 0.00 4.40
202 203 5.444481 GCCAATCACGTGTTTATGAAAATGC 60.444 40.000 16.51 5.51 0.00 3.56
203 204 5.632764 TGCCAATCACGTGTTTATGAAAATG 59.367 36.000 16.51 0.00 0.00 2.32
204 205 5.777802 TGCCAATCACGTGTTTATGAAAAT 58.222 33.333 16.51 0.00 0.00 1.82
206 207 4.837896 TGCCAATCACGTGTTTATGAAA 57.162 36.364 16.51 0.00 0.00 2.69
207 208 4.277174 ACTTGCCAATCACGTGTTTATGAA 59.723 37.500 16.51 5.84 0.00 2.57
208 209 3.818210 ACTTGCCAATCACGTGTTTATGA 59.182 39.130 16.51 0.00 0.00 2.15
209 210 3.913763 CACTTGCCAATCACGTGTTTATG 59.086 43.478 16.51 10.08 39.34 1.90
210 211 3.611530 GCACTTGCCAATCACGTGTTTAT 60.612 43.478 16.51 0.00 44.17 1.40
211 212 2.287308 GCACTTGCCAATCACGTGTTTA 60.287 45.455 16.51 0.00 44.17 2.01
212 213 1.535860 GCACTTGCCAATCACGTGTTT 60.536 47.619 16.51 10.99 44.17 2.83
213 214 0.030638 GCACTTGCCAATCACGTGTT 59.969 50.000 16.51 3.97 44.17 3.32
217 218 0.386352 CAGTGCACTTGCCAATCACG 60.386 55.000 18.94 0.00 41.18 4.35
218 219 0.953727 TCAGTGCACTTGCCAATCAC 59.046 50.000 18.94 0.00 41.18 3.06
219 220 1.241165 CTCAGTGCACTTGCCAATCA 58.759 50.000 18.94 0.00 41.18 2.57
221 222 2.566833 TACTCAGTGCACTTGCCAAT 57.433 45.000 18.94 2.31 41.18 3.16
222 223 2.340210 TTACTCAGTGCACTTGCCAA 57.660 45.000 18.94 6.62 41.18 4.52
224 225 1.068954 GCTTTACTCAGTGCACTTGCC 60.069 52.381 18.94 0.00 41.18 4.52
228 229 2.918712 ACAGCTTTACTCAGTGCACT 57.081 45.000 15.25 15.25 0.00 4.40
229 230 4.058817 AGTTACAGCTTTACTCAGTGCAC 58.941 43.478 9.40 9.40 0.00 4.57
230 231 4.307432 GAGTTACAGCTTTACTCAGTGCA 58.693 43.478 12.48 0.00 38.49 4.57
231 232 3.680458 GGAGTTACAGCTTTACTCAGTGC 59.320 47.826 16.98 0.00 39.98 4.40
233 234 3.901844 TGGGAGTTACAGCTTTACTCAGT 59.098 43.478 16.98 0.00 39.98 3.41
235 236 4.832248 CATGGGAGTTACAGCTTTACTCA 58.168 43.478 16.98 0.00 39.98 3.41
236 237 3.623510 GCATGGGAGTTACAGCTTTACTC 59.376 47.826 9.95 9.95 38.02 2.59
237 238 3.610911 GCATGGGAGTTACAGCTTTACT 58.389 45.455 0.00 0.00 0.00 2.24
238 239 2.683362 GGCATGGGAGTTACAGCTTTAC 59.317 50.000 0.00 0.00 0.00 2.01
239 240 2.679639 CGGCATGGGAGTTACAGCTTTA 60.680 50.000 0.00 0.00 0.00 1.85
240 241 1.839424 GGCATGGGAGTTACAGCTTT 58.161 50.000 0.00 0.00 0.00 3.51
241 242 0.392998 CGGCATGGGAGTTACAGCTT 60.393 55.000 0.00 0.00 0.00 3.74
243 244 2.472909 GCGGCATGGGAGTTACAGC 61.473 63.158 0.00 0.00 0.00 4.40
245 246 0.833949 TATGCGGCATGGGAGTTACA 59.166 50.000 24.99 0.00 0.00 2.41
246 247 1.961793 TTATGCGGCATGGGAGTTAC 58.038 50.000 24.99 0.00 0.00 2.50
247 248 2.685897 GTTTTATGCGGCATGGGAGTTA 59.314 45.455 24.99 0.06 0.00 2.24
248 249 1.476488 GTTTTATGCGGCATGGGAGTT 59.524 47.619 24.99 0.02 0.00 3.01
249 250 1.102978 GTTTTATGCGGCATGGGAGT 58.897 50.000 24.99 0.82 0.00 3.85
250 251 0.385390 GGTTTTATGCGGCATGGGAG 59.615 55.000 24.99 0.00 0.00 4.30
251 252 1.040339 GGGTTTTATGCGGCATGGGA 61.040 55.000 24.99 8.42 0.00 4.37
253 254 0.752054 ATGGGTTTTATGCGGCATGG 59.248 50.000 24.99 0.00 0.00 3.66
256 257 0.323816 TGGATGGGTTTTATGCGGCA 60.324 50.000 4.58 4.58 0.00 5.69
258 259 3.131933 TCATTTGGATGGGTTTTATGCGG 59.868 43.478 0.00 0.00 33.93 5.69
259 260 4.383850 TCATTTGGATGGGTTTTATGCG 57.616 40.909 0.00 0.00 33.93 4.73
260 261 7.474190 CATTTTCATTTGGATGGGTTTTATGC 58.526 34.615 0.00 0.00 33.93 3.14
263 264 6.537355 TGCATTTTCATTTGGATGGGTTTTA 58.463 32.000 0.00 0.00 33.93 1.52
264 265 5.383476 TGCATTTTCATTTGGATGGGTTTT 58.617 33.333 0.00 0.00 33.93 2.43
266 267 4.637387 TGCATTTTCATTTGGATGGGTT 57.363 36.364 0.00 0.00 33.93 4.11
267 268 4.581868 CTTGCATTTTCATTTGGATGGGT 58.418 39.130 0.00 0.00 33.93 4.51
268 269 3.375922 GCTTGCATTTTCATTTGGATGGG 59.624 43.478 0.00 0.00 33.93 4.00
270 271 5.352846 TGATGCTTGCATTTTCATTTGGATG 59.647 36.000 9.59 0.00 34.46 3.51
271 272 5.492895 TGATGCTTGCATTTTCATTTGGAT 58.507 33.333 9.59 0.00 0.00 3.41
272 273 4.895961 TGATGCTTGCATTTTCATTTGGA 58.104 34.783 9.59 0.00 0.00 3.53
273 274 5.614923 TTGATGCTTGCATTTTCATTTGG 57.385 34.783 9.59 0.00 0.00 3.28
274 275 9.272901 CTTATTTGATGCTTGCATTTTCATTTG 57.727 29.630 9.59 0.00 0.00 2.32
275 276 9.221933 TCTTATTTGATGCTTGCATTTTCATTT 57.778 25.926 9.59 0.00 0.00 2.32
276 277 8.780846 TCTTATTTGATGCTTGCATTTTCATT 57.219 26.923 9.59 0.00 0.00 2.57
277 278 8.958119 ATCTTATTTGATGCTTGCATTTTCAT 57.042 26.923 9.59 3.40 0.00 2.57
278 279 8.780846 AATCTTATTTGATGCTTGCATTTTCA 57.219 26.923 9.59 1.61 0.00 2.69
279 280 8.875803 TGAATCTTATTTGATGCTTGCATTTTC 58.124 29.630 9.59 0.00 0.00 2.29
281 282 8.958119 ATGAATCTTATTTGATGCTTGCATTT 57.042 26.923 9.59 0.00 0.00 2.32
282 283 8.958119 AATGAATCTTATTTGATGCTTGCATT 57.042 26.923 9.59 0.00 0.00 3.56
283 284 8.826710 CAAATGAATCTTATTTGATGCTTGCAT 58.173 29.630 7.91 7.91 44.37 3.96
285 286 7.123830 GCAAATGAATCTTATTTGATGCTTGC 58.876 34.615 12.98 0.00 44.37 4.01
286 287 8.114290 GTGCAAATGAATCTTATTTGATGCTTG 58.886 33.333 12.98 0.00 44.37 4.01
287 288 7.820386 TGTGCAAATGAATCTTATTTGATGCTT 59.180 29.630 12.98 0.00 44.37 3.91
288 289 7.324935 TGTGCAAATGAATCTTATTTGATGCT 58.675 30.769 12.98 0.00 44.37 3.79
290 291 9.914923 CATTGTGCAAATGAATCTTATTTGATG 57.085 29.630 12.98 5.48 44.37 3.07
291 292 9.104965 CCATTGTGCAAATGAATCTTATTTGAT 57.895 29.630 17.70 0.00 44.37 2.57
292 293 7.549842 CCCATTGTGCAAATGAATCTTATTTGA 59.450 33.333 17.70 0.00 44.37 2.69
295 296 5.818857 GCCCATTGTGCAAATGAATCTTATT 59.181 36.000 17.70 0.00 0.00 1.40
296 297 5.362263 GCCCATTGTGCAAATGAATCTTAT 58.638 37.500 17.70 0.00 0.00 1.73
297 298 4.677514 CGCCCATTGTGCAAATGAATCTTA 60.678 41.667 17.70 0.00 0.00 2.10
298 299 3.602483 GCCCATTGTGCAAATGAATCTT 58.398 40.909 17.70 0.00 0.00 2.40
300 301 1.928503 CGCCCATTGTGCAAATGAATC 59.071 47.619 17.70 8.91 0.00 2.52
301 302 1.549620 TCGCCCATTGTGCAAATGAAT 59.450 42.857 17.70 0.85 0.00 2.57
302 303 0.964700 TCGCCCATTGTGCAAATGAA 59.035 45.000 17.70 0.00 0.00 2.57
303 304 0.964700 TTCGCCCATTGTGCAAATGA 59.035 45.000 17.70 1.86 0.00 2.57
304 305 1.067706 TCTTCGCCCATTGTGCAAATG 60.068 47.619 12.10 12.10 0.00 2.32
305 306 1.255882 TCTTCGCCCATTGTGCAAAT 58.744 45.000 0.00 0.00 0.00 2.32
306 307 1.255882 ATCTTCGCCCATTGTGCAAA 58.744 45.000 0.00 0.00 0.00 3.68
307 308 2.121291 TATCTTCGCCCATTGTGCAA 57.879 45.000 0.00 0.00 0.00 4.08
308 309 2.221169 GATATCTTCGCCCATTGTGCA 58.779 47.619 0.00 0.00 0.00 4.57
309 310 1.537202 GGATATCTTCGCCCATTGTGC 59.463 52.381 2.05 0.00 0.00 4.57
310 311 2.154462 GGGATATCTTCGCCCATTGTG 58.846 52.381 2.05 0.00 41.64 3.33
311 312 1.774254 TGGGATATCTTCGCCCATTGT 59.226 47.619 2.05 0.00 46.57 2.71
312 313 2.566833 TGGGATATCTTCGCCCATTG 57.433 50.000 2.05 0.00 46.57 2.82
316 317 2.945668 GCAATATGGGATATCTTCGCCC 59.054 50.000 2.05 0.00 42.38 6.13
317 318 2.609459 CGCAATATGGGATATCTTCGCC 59.391 50.000 2.05 0.00 36.49 5.54
318 319 3.521560 TCGCAATATGGGATATCTTCGC 58.478 45.455 2.05 0.00 34.23 4.70
327 328 5.620206 ACAACATTAGATCGCAATATGGGA 58.380 37.500 0.00 0.00 43.55 4.37
328 329 5.947228 ACAACATTAGATCGCAATATGGG 57.053 39.130 0.00 0.00 0.00 4.00
332 333 9.990360 TCCTAATTACAACATTAGATCGCAATA 57.010 29.630 2.60 0.00 38.54 1.90
333 334 8.902540 TCCTAATTACAACATTAGATCGCAAT 57.097 30.769 2.60 0.00 38.54 3.56
334 335 8.609176 GTTCCTAATTACAACATTAGATCGCAA 58.391 33.333 2.60 0.00 38.54 4.85
335 336 7.042992 CGTTCCTAATTACAACATTAGATCGCA 60.043 37.037 2.60 0.00 38.54 5.10
336 337 7.042925 ACGTTCCTAATTACAACATTAGATCGC 60.043 37.037 2.60 0.00 38.54 4.58
337 338 8.348983 ACGTTCCTAATTACAACATTAGATCG 57.651 34.615 2.60 6.32 38.54 3.69
341 342 9.887406 ACAAAACGTTCCTAATTACAACATTAG 57.113 29.630 0.00 0.00 36.74 1.73
343 344 9.026074 CAACAAAACGTTCCTAATTACAACATT 57.974 29.630 0.00 0.00 34.86 2.71
344 345 7.650104 CCAACAAAACGTTCCTAATTACAACAT 59.350 33.333 0.00 0.00 34.86 2.71
345 346 6.973474 CCAACAAAACGTTCCTAATTACAACA 59.027 34.615 0.00 0.00 34.86 3.33
346 347 6.074729 GCCAACAAAACGTTCCTAATTACAAC 60.075 38.462 0.00 0.00 34.86 3.32
347 348 5.978322 GCCAACAAAACGTTCCTAATTACAA 59.022 36.000 0.00 0.00 34.86 2.41
348 349 5.521544 GCCAACAAAACGTTCCTAATTACA 58.478 37.500 0.00 0.00 34.86 2.41
349 350 4.613866 CGCCAACAAAACGTTCCTAATTAC 59.386 41.667 0.00 0.00 34.86 1.89
350 351 4.785417 CGCCAACAAAACGTTCCTAATTA 58.215 39.130 0.00 0.00 34.86 1.40
351 352 3.634283 CGCCAACAAAACGTTCCTAATT 58.366 40.909 0.00 0.00 34.86 1.40
352 353 2.606065 GCGCCAACAAAACGTTCCTAAT 60.606 45.455 0.00 0.00 34.86 1.73
353 354 1.268640 GCGCCAACAAAACGTTCCTAA 60.269 47.619 0.00 0.00 34.86 2.69
354 355 0.308376 GCGCCAACAAAACGTTCCTA 59.692 50.000 0.00 0.00 34.86 2.94
355 356 1.065109 GCGCCAACAAAACGTTCCT 59.935 52.632 0.00 0.00 34.86 3.36
356 357 1.947146 GGCGCCAACAAAACGTTCC 60.947 57.895 24.80 0.00 34.86 3.62
357 358 2.290082 CGGCGCCAACAAAACGTTC 61.290 57.895 28.98 0.00 34.86 3.95
358 359 2.278271 CGGCGCCAACAAAACGTT 60.278 55.556 28.98 0.00 38.83 3.99
359 360 4.916273 GCGGCGCCAACAAAACGT 62.916 61.111 28.98 0.00 0.00 3.99
581 1514 6.238484 GCTGCCTAAGTCCTTGTATAAATGTG 60.238 42.308 0.00 0.00 0.00 3.21
586 1520 4.417426 GGCTGCCTAAGTCCTTGTATAA 57.583 45.455 12.43 0.00 0.00 0.98
696 1654 1.796151 CGCATGCAGTGGGTAGTTG 59.204 57.895 19.57 0.00 36.12 3.16
1095 4326 1.296392 CATCGTCCCTGGCAAGACA 59.704 57.895 15.29 5.45 33.08 3.41
1105 4401 2.173669 CGTGTGATGGCATCGTCCC 61.174 63.158 21.65 10.44 0.00 4.46
1123 4419 1.118356 AGATGGAGTGGAGATCGGCC 61.118 60.000 0.00 0.00 0.00 6.13
1135 4431 2.105128 GTCCACGGCGAGATGGAG 59.895 66.667 16.62 0.00 45.72 3.86
1155 4451 3.312504 CGTATCGGTGCTGCGACG 61.313 66.667 9.12 9.12 0.00 5.12
1163 4459 1.410737 CGACAAGGTGCGTATCGGTG 61.411 60.000 0.00 0.00 0.00 4.94
1164 4460 1.153901 CGACAAGGTGCGTATCGGT 60.154 57.895 0.00 0.00 0.00 4.69
1170 4466 2.279918 GTCCACGACAAGGTGCGT 60.280 61.111 0.00 0.00 42.11 5.24
1171 4467 3.403057 CGTCCACGACAAGGTGCG 61.403 66.667 0.00 0.00 43.02 5.34
1192 4491 2.792290 CGAGTTCGGCACTGCGATG 61.792 63.158 0.00 0.00 35.01 3.84
1203 4502 2.278026 TGATGGTGATGTCGAGTTCG 57.722 50.000 0.00 0.00 41.45 3.95
1205 4504 2.910199 CCATGATGGTGATGTCGAGTT 58.090 47.619 2.54 0.00 31.35 3.01
1206 4505 1.473965 GCCATGATGGTGATGTCGAGT 60.474 52.381 13.84 0.00 40.46 4.18
1207 4506 1.202615 AGCCATGATGGTGATGTCGAG 60.203 52.381 13.84 0.00 40.46 4.04
1210 4509 2.646930 TGAAGCCATGATGGTGATGTC 58.353 47.619 13.84 4.48 40.46 3.06
1211 4510 2.756760 GTTGAAGCCATGATGGTGATGT 59.243 45.455 13.84 0.00 40.46 3.06
1225 4524 2.556287 CGAAGGCGTGGTTGAAGC 59.444 61.111 0.00 0.00 0.00 3.86
1228 4527 2.664851 CTGCGAAGGCGTGGTTGA 60.665 61.111 0.00 0.00 44.10 3.18
1229 4528 4.389576 GCTGCGAAGGCGTGGTTG 62.390 66.667 0.00 0.00 44.10 3.77
1230 4529 4.927782 TGCTGCGAAGGCGTGGTT 62.928 61.111 0.00 0.00 44.10 3.67
1247 9296 2.045926 GATGGCTTGGTGACCGCT 60.046 61.111 0.00 0.00 0.00 5.52
1248 9297 1.675641 AAGATGGCTTGGTGACCGC 60.676 57.895 0.00 0.00 31.83 5.68
1258 9307 4.728110 TGCTGCGGCAAGATGGCT 62.728 61.111 20.23 0.00 46.36 4.75
1381 9437 3.633235 CGACGCTGCTAAGAAGATGTAT 58.367 45.455 0.00 0.00 0.00 2.29
1456 9512 2.516460 GCCGCTAGGAGGAGACGA 60.516 66.667 0.00 0.00 41.02 4.20
1510 9727 1.447838 GCGAGATGAAGGCCGTCAA 60.448 57.895 25.43 9.23 33.19 3.18
1890 10123 6.717289 TGCCTAAGTCCTTGTATAAATGTGT 58.283 36.000 0.00 0.00 0.00 3.72
1891 10124 6.238484 GCTGCCTAAGTCCTTGTATAAATGTG 60.238 42.308 0.00 0.00 0.00 3.21
1892 10125 5.823045 GCTGCCTAAGTCCTTGTATAAATGT 59.177 40.000 0.00 0.00 0.00 2.71
1896 10129 4.417426 GGCTGCCTAAGTCCTTGTATAA 57.583 45.455 12.43 0.00 0.00 0.98
1907 10140 2.436646 CGTGGTGGGCTGCCTAAG 60.437 66.667 19.68 1.20 0.00 2.18
1908 10141 4.715523 GCGTGGTGGGCTGCCTAA 62.716 66.667 19.68 4.43 0.00 2.69
1919 10152 4.295119 GAGGTGGACGTGCGTGGT 62.295 66.667 0.67 0.00 0.00 4.16
1921 10154 3.991051 AGGAGGTGGACGTGCGTG 61.991 66.667 0.67 0.00 0.00 5.34
1922 10155 3.991051 CAGGAGGTGGACGTGCGT 61.991 66.667 1.60 0.00 0.00 5.24
1931 10164 1.144936 GGAGCGATTCCAGGAGGTG 59.855 63.158 1.87 0.00 46.01 4.00
1932 10165 3.635510 GGAGCGATTCCAGGAGGT 58.364 61.111 1.87 0.00 46.01 3.85
1939 10172 0.460987 CCTCTGTGTGGAGCGATTCC 60.461 60.000 0.00 0.00 46.98 3.01
1940 10173 0.532573 TCCTCTGTGTGGAGCGATTC 59.467 55.000 0.00 0.00 32.43 2.52
1941 10174 1.198713 ATCCTCTGTGTGGAGCGATT 58.801 50.000 0.00 0.00 36.99 3.34
1942 10175 2.073252 TATCCTCTGTGTGGAGCGAT 57.927 50.000 0.00 0.00 36.99 4.58
1943 10176 1.847328 TTATCCTCTGTGTGGAGCGA 58.153 50.000 0.00 0.00 36.99 4.93
1944 10177 2.898729 ATTATCCTCTGTGTGGAGCG 57.101 50.000 0.00 0.00 36.99 5.03
1945 10178 3.126831 CGAATTATCCTCTGTGTGGAGC 58.873 50.000 0.00 0.00 36.99 4.70
1946 10179 3.133003 ACCGAATTATCCTCTGTGTGGAG 59.867 47.826 0.00 0.00 36.99 3.86
1947 10180 3.104512 ACCGAATTATCCTCTGTGTGGA 58.895 45.455 0.00 0.00 38.06 4.02
1948 10181 3.543680 ACCGAATTATCCTCTGTGTGG 57.456 47.619 0.00 0.00 0.00 4.17
1949 10182 3.623060 CCAACCGAATTATCCTCTGTGTG 59.377 47.826 0.00 0.00 0.00 3.82
1950 10183 3.873910 CCAACCGAATTATCCTCTGTGT 58.126 45.455 0.00 0.00 0.00 3.72
1951 10184 2.614057 GCCAACCGAATTATCCTCTGTG 59.386 50.000 0.00 0.00 0.00 3.66
1952 10185 2.421529 GGCCAACCGAATTATCCTCTGT 60.422 50.000 0.00 0.00 0.00 3.41
1953 10186 2.222027 GGCCAACCGAATTATCCTCTG 58.778 52.381 0.00 0.00 0.00 3.35
1954 10187 2.640316 GGCCAACCGAATTATCCTCT 57.360 50.000 0.00 0.00 0.00 3.69
1969 10202 0.034337 GTTGAGTTAGTGGACGGCCA 59.966 55.000 5.41 5.41 43.47 5.36
1970 10203 0.320697 AGTTGAGTTAGTGGACGGCC 59.679 55.000 0.00 0.00 0.00 6.13
1971 10204 3.308438 TTAGTTGAGTTAGTGGACGGC 57.692 47.619 0.00 0.00 0.00 5.68
1972 10205 7.490000 AGATAATTAGTTGAGTTAGTGGACGG 58.510 38.462 0.00 0.00 0.00 4.79
1973 10206 7.648510 GGAGATAATTAGTTGAGTTAGTGGACG 59.351 40.741 0.00 0.00 0.00 4.79
1974 10207 8.475639 TGGAGATAATTAGTTGAGTTAGTGGAC 58.524 37.037 0.00 0.00 0.00 4.02
1975 10208 8.603898 TGGAGATAATTAGTTGAGTTAGTGGA 57.396 34.615 0.00 0.00 0.00 4.02
1976 10209 9.265901 CATGGAGATAATTAGTTGAGTTAGTGG 57.734 37.037 0.00 0.00 0.00 4.00
1977 10210 8.768955 GCATGGAGATAATTAGTTGAGTTAGTG 58.231 37.037 0.00 0.00 0.00 2.74
1978 10211 8.486210 TGCATGGAGATAATTAGTTGAGTTAGT 58.514 33.333 0.00 0.00 0.00 2.24
1979 10212 8.768955 GTGCATGGAGATAATTAGTTGAGTTAG 58.231 37.037 0.00 0.00 0.00 2.34
1980 10213 7.715249 GGTGCATGGAGATAATTAGTTGAGTTA 59.285 37.037 0.00 0.00 0.00 2.24
1981 10214 6.543831 GGTGCATGGAGATAATTAGTTGAGTT 59.456 38.462 0.00 0.00 0.00 3.01
1982 10215 6.058183 GGTGCATGGAGATAATTAGTTGAGT 58.942 40.000 0.00 0.00 0.00 3.41
1983 10216 6.057533 TGGTGCATGGAGATAATTAGTTGAG 58.942 40.000 0.00 0.00 0.00 3.02
1984 10217 6.000246 TGGTGCATGGAGATAATTAGTTGA 58.000 37.500 0.00 0.00 0.00 3.18
1985 10218 6.319658 AGTTGGTGCATGGAGATAATTAGTTG 59.680 38.462 0.00 0.00 0.00 3.16
1986 10219 6.426587 AGTTGGTGCATGGAGATAATTAGTT 58.573 36.000 0.00 0.00 0.00 2.24
1987 10220 6.006275 AGTTGGTGCATGGAGATAATTAGT 57.994 37.500 0.00 0.00 0.00 2.24
1988 10221 6.428159 GGTAGTTGGTGCATGGAGATAATTAG 59.572 42.308 0.00 0.00 0.00 1.73
1989 10222 6.296026 GGTAGTTGGTGCATGGAGATAATTA 58.704 40.000 0.00 0.00 0.00 1.40
1990 10223 5.133221 GGTAGTTGGTGCATGGAGATAATT 58.867 41.667 0.00 0.00 0.00 1.40
1991 10224 4.446311 GGGTAGTTGGTGCATGGAGATAAT 60.446 45.833 0.00 0.00 0.00 1.28
1992 10225 3.118038 GGGTAGTTGGTGCATGGAGATAA 60.118 47.826 0.00 0.00 0.00 1.75
1993 10226 2.438021 GGGTAGTTGGTGCATGGAGATA 59.562 50.000 0.00 0.00 0.00 1.98
1994 10227 1.212935 GGGTAGTTGGTGCATGGAGAT 59.787 52.381 0.00 0.00 0.00 2.75
1995 10228 0.618458 GGGTAGTTGGTGCATGGAGA 59.382 55.000 0.00 0.00 0.00 3.71
1996 10229 0.327924 TGGGTAGTTGGTGCATGGAG 59.672 55.000 0.00 0.00 0.00 3.86
1997 10230 0.037590 GTGGGTAGTTGGTGCATGGA 59.962 55.000 0.00 0.00 0.00 3.41
1998 10231 0.038166 AGTGGGTAGTTGGTGCATGG 59.962 55.000 0.00 0.00 0.00 3.66
1999 10232 1.167851 CAGTGGGTAGTTGGTGCATG 58.832 55.000 0.00 0.00 0.00 4.06
2000 10233 0.609131 GCAGTGGGTAGTTGGTGCAT 60.609 55.000 0.00 0.00 0.00 3.96
2001 10234 1.228124 GCAGTGGGTAGTTGGTGCA 60.228 57.895 0.00 0.00 0.00 4.57
2002 10235 0.609131 ATGCAGTGGGTAGTTGGTGC 60.609 55.000 0.00 0.00 0.00 5.01
2003 10236 1.167851 CATGCAGTGGGTAGTTGGTG 58.832 55.000 0.00 0.00 0.00 4.17
2004 10237 0.609131 GCATGCAGTGGGTAGTTGGT 60.609 55.000 14.21 0.00 0.00 3.67
2005 10238 1.647545 CGCATGCAGTGGGTAGTTGG 61.648 60.000 19.57 0.00 36.12 3.77
2006 10239 1.796151 CGCATGCAGTGGGTAGTTG 59.204 57.895 19.57 0.00 36.12 3.16
2007 10240 4.301505 CGCATGCAGTGGGTAGTT 57.698 55.556 19.57 0.00 36.12 2.24
2012 10245 4.409218 GCACACGCATGCAGTGGG 62.409 66.667 31.38 30.12 45.39 4.61
2022 10255 0.307453 TGAGTCAATGTTGCACACGC 59.693 50.000 0.00 0.00 39.24 5.34
2023 10256 1.661178 GCTGAGTCAATGTTGCACACG 60.661 52.381 0.00 0.00 0.00 4.49
2024 10257 1.334556 TGCTGAGTCAATGTTGCACAC 59.665 47.619 0.17 0.00 0.00 3.82
2025 10258 1.605232 CTGCTGAGTCAATGTTGCACA 59.395 47.619 0.17 0.00 0.00 4.57
2026 10259 1.665161 GCTGCTGAGTCAATGTTGCAC 60.665 52.381 0.17 0.00 0.00 4.57
2027 10260 0.594602 GCTGCTGAGTCAATGTTGCA 59.405 50.000 4.19 4.19 0.00 4.08
2028 10261 0.109412 GGCTGCTGAGTCAATGTTGC 60.109 55.000 0.00 0.00 0.00 4.17
2029 10262 1.068748 GTGGCTGCTGAGTCAATGTTG 60.069 52.381 0.00 0.00 34.92 3.33
2030 10263 1.242076 GTGGCTGCTGAGTCAATGTT 58.758 50.000 0.00 0.00 34.92 2.71
2031 10264 0.109153 TGTGGCTGCTGAGTCAATGT 59.891 50.000 0.00 0.00 34.92 2.71
2032 10265 0.520404 GTGTGGCTGCTGAGTCAATG 59.480 55.000 0.00 0.00 34.92 2.82
2033 10266 0.952497 CGTGTGGCTGCTGAGTCAAT 60.952 55.000 0.00 0.00 34.92 2.57
2034 10267 1.595109 CGTGTGGCTGCTGAGTCAA 60.595 57.895 0.00 0.00 34.92 3.18
2035 10268 2.029518 CGTGTGGCTGCTGAGTCA 59.970 61.111 0.00 0.00 0.00 3.41
2036 10269 2.024319 GTCGTGTGGCTGCTGAGTC 61.024 63.158 0.00 0.00 0.00 3.36
2037 10270 2.029666 GTCGTGTGGCTGCTGAGT 59.970 61.111 0.00 0.00 0.00 3.41
2038 10271 2.740055 GGTCGTGTGGCTGCTGAG 60.740 66.667 0.00 0.00 0.00 3.35
2039 10272 4.314440 GGGTCGTGTGGCTGCTGA 62.314 66.667 0.00 0.00 0.00 4.26
2040 10273 3.907260 ATGGGTCGTGTGGCTGCTG 62.907 63.158 0.00 0.00 0.00 4.41
2041 10274 3.640407 ATGGGTCGTGTGGCTGCT 61.640 61.111 0.00 0.00 0.00 4.24
2042 10275 3.434319 CATGGGTCGTGTGGCTGC 61.434 66.667 0.00 0.00 0.00 5.25
2043 10276 3.434319 GCATGGGTCGTGTGGCTG 61.434 66.667 0.00 0.00 0.00 4.85
2049 10282 2.334181 TGTGCATGCATGGGTCGTG 61.334 57.895 25.64 2.55 0.00 4.35
2050 10283 2.033911 TGTGCATGCATGGGTCGT 59.966 55.556 25.64 0.00 0.00 4.34
2053 10286 1.533513 TTGGTGTGCATGCATGGGT 60.534 52.632 25.64 0.00 0.00 4.51
2055 10288 1.444724 CGTTGGTGTGCATGCATGG 60.445 57.895 25.64 10.03 0.00 3.66
2058 10291 1.100463 AGTTCGTTGGTGTGCATGCA 61.100 50.000 18.46 18.46 0.00 3.96
2059 10292 0.871722 TAGTTCGTTGGTGTGCATGC 59.128 50.000 11.82 11.82 0.00 4.06
2061 10294 2.846193 AGTTAGTTCGTTGGTGTGCAT 58.154 42.857 0.00 0.00 0.00 3.96
2062 10295 2.319136 AGTTAGTTCGTTGGTGTGCA 57.681 45.000 0.00 0.00 0.00 4.57
2063 10296 2.157085 GCTAGTTAGTTCGTTGGTGTGC 59.843 50.000 0.00 0.00 0.00 4.57
2064 10297 3.183775 GTGCTAGTTAGTTCGTTGGTGTG 59.816 47.826 0.00 0.00 0.00 3.82
2069 10302 2.407361 CGGTGTGCTAGTTAGTTCGTTG 59.593 50.000 0.00 0.00 0.00 4.10
2073 10306 4.745649 AGATTCGGTGTGCTAGTTAGTTC 58.254 43.478 0.00 0.00 0.00 3.01
2074 10307 4.463186 AGAGATTCGGTGTGCTAGTTAGTT 59.537 41.667 0.00 0.00 0.00 2.24
2081 10314 1.405526 GCCAAGAGATTCGGTGTGCTA 60.406 52.381 0.00 0.00 0.00 3.49
2082 10315 0.674895 GCCAAGAGATTCGGTGTGCT 60.675 55.000 0.00 0.00 0.00 4.40
2083 10316 0.674895 AGCCAAGAGATTCGGTGTGC 60.675 55.000 0.00 0.00 0.00 4.57
2084 10317 1.363744 GAGCCAAGAGATTCGGTGTG 58.636 55.000 0.00 0.00 0.00 3.82
2085 10318 0.250513 GGAGCCAAGAGATTCGGTGT 59.749 55.000 0.00 0.00 0.00 4.16
2089 10322 2.216898 GGATTGGAGCCAAGAGATTCG 58.783 52.381 8.09 0.00 39.47 3.34
2090 10323 3.212685 CTGGATTGGAGCCAAGAGATTC 58.787 50.000 8.09 0.19 39.47 2.52
2092 10325 1.133853 GCTGGATTGGAGCCAAGAGAT 60.134 52.381 8.09 0.00 39.47 2.75
2093 10326 0.254178 GCTGGATTGGAGCCAAGAGA 59.746 55.000 8.09 0.00 39.47 3.10
2095 10328 1.583556 TAGCTGGATTGGAGCCAAGA 58.416 50.000 8.09 0.00 39.47 3.02
2098 10331 0.255890 GGTTAGCTGGATTGGAGCCA 59.744 55.000 0.00 0.00 37.12 4.75
2099 10332 0.466372 GGGTTAGCTGGATTGGAGCC 60.466 60.000 0.00 0.00 37.12 4.70
2100 10333 0.255890 TGGGTTAGCTGGATTGGAGC 59.744 55.000 0.00 0.00 36.65 4.70
2102 10335 2.580322 TGAATGGGTTAGCTGGATTGGA 59.420 45.455 0.00 0.00 0.00 3.53
2103 10336 2.954318 CTGAATGGGTTAGCTGGATTGG 59.046 50.000 0.00 0.00 0.00 3.16
2104 10337 2.360165 GCTGAATGGGTTAGCTGGATTG 59.640 50.000 0.00 0.00 34.70 2.67
2105 10338 2.659428 GCTGAATGGGTTAGCTGGATT 58.341 47.619 0.00 0.00 34.70 3.01
2106 10339 1.133668 GGCTGAATGGGTTAGCTGGAT 60.134 52.381 0.00 0.00 37.58 3.41
2107 10340 0.255890 GGCTGAATGGGTTAGCTGGA 59.744 55.000 0.00 0.00 37.58 3.86
2108 10341 1.097547 CGGCTGAATGGGTTAGCTGG 61.098 60.000 0.00 0.00 39.54 4.85
2110 10343 1.224592 CCGGCTGAATGGGTTAGCT 59.775 57.895 0.00 0.00 37.58 3.32
2111 10344 1.077716 ACCGGCTGAATGGGTTAGC 60.078 57.895 0.00 0.00 36.74 3.09
2112 10345 0.541863 AGACCGGCTGAATGGGTTAG 59.458 55.000 0.00 0.00 33.28 2.34
2113 10346 2.691663 AGACCGGCTGAATGGGTTA 58.308 52.632 0.00 0.00 33.28 2.85
2125 10358 4.003788 ACGTTGGAGCCAGACCGG 62.004 66.667 0.00 0.00 38.11 5.28
2127 10360 3.050275 GCACGTTGGAGCCAGACC 61.050 66.667 0.00 0.00 0.00 3.85
2133 10366 3.050275 GACCAGGCACGTTGGAGC 61.050 66.667 11.69 0.00 39.08 4.70
2135 10368 4.980805 GCGACCAGGCACGTTGGA 62.981 66.667 11.69 0.00 39.08 3.53
2168 10587 4.450122 GTGGTGCTGTGCGATGCG 62.450 66.667 0.00 0.00 0.00 4.73
2171 10590 2.359107 CCTGTGGTGCTGTGCGAT 60.359 61.111 0.00 0.00 0.00 4.58
2176 10595 1.002868 GAGATGCCTGTGGTGCTGT 60.003 57.895 0.00 0.00 0.00 4.40
2179 10598 2.046892 ACGAGATGCCTGTGGTGC 60.047 61.111 0.00 0.00 0.00 5.01
2185 10620 0.316278 CGAGTACGACGAGATGCCTG 60.316 60.000 0.00 0.00 42.66 4.85
2186 10621 2.015382 CGAGTACGACGAGATGCCT 58.985 57.895 0.00 0.00 42.66 4.75
2196 10631 4.899687 GCGATGCGGCGAGTACGA 62.900 66.667 12.98 0.00 42.66 3.43
2198 10633 3.617538 GTGCGATGCGGCGAGTAC 61.618 66.667 12.98 4.25 35.06 2.73
2208 10643 3.057548 TTGGGCTGCTGTGCGATG 61.058 61.111 0.00 0.00 0.00 3.84
2212 10647 1.930908 GAGATGTTGGGCTGCTGTGC 61.931 60.000 0.00 0.00 0.00 4.57
2216 10651 1.078848 GTCGAGATGTTGGGCTGCT 60.079 57.895 0.00 0.00 0.00 4.24
2217 10652 0.674895 AAGTCGAGATGTTGGGCTGC 60.675 55.000 0.00 0.00 0.00 5.25
2219 10654 1.270907 AGAAGTCGAGATGTTGGGCT 58.729 50.000 0.00 0.00 0.00 5.19
2220 10655 2.003301 GAAGAAGTCGAGATGTTGGGC 58.997 52.381 0.00 0.00 0.00 5.36
2233 10668 1.222115 GGTTGAGTGCGCGAAGAAGT 61.222 55.000 12.10 0.00 0.00 3.01
2239 10674 2.664851 CTTGGGTTGAGTGCGCGA 60.665 61.111 12.10 0.00 0.00 5.87
2241 10676 2.463675 GAAGCTTGGGTTGAGTGCGC 62.464 60.000 2.10 0.00 0.00 6.09
2243 10678 0.595095 CAGAAGCTTGGGTTGAGTGC 59.405 55.000 2.10 0.00 0.00 4.40
2245 10680 0.886490 CGCAGAAGCTTGGGTTGAGT 60.886 55.000 2.10 0.00 39.10 3.41
2246 10681 1.580845 CCGCAGAAGCTTGGGTTGAG 61.581 60.000 2.10 0.00 39.10 3.02
2247 10682 1.600636 CCGCAGAAGCTTGGGTTGA 60.601 57.895 2.10 0.00 39.10 3.18
2248 10683 2.956987 CCGCAGAAGCTTGGGTTG 59.043 61.111 2.10 0.00 39.10 3.77
2249 10684 2.124507 TAGCCGCAGAAGCTTGGGTT 62.125 55.000 2.10 0.16 41.83 4.11
2250 10685 2.527951 CTAGCCGCAGAAGCTTGGGT 62.528 60.000 2.10 7.13 41.83 4.51
2251 10686 1.817099 CTAGCCGCAGAAGCTTGGG 60.817 63.158 2.10 0.00 41.83 4.12
2253 10688 0.179100 TAGCTAGCCGCAGAAGCTTG 60.179 55.000 12.13 0.00 43.97 4.01
2254 10689 0.179097 GTAGCTAGCCGCAGAAGCTT 60.179 55.000 12.13 0.00 43.97 3.74
2256 10691 0.596341 GAGTAGCTAGCCGCAGAAGC 60.596 60.000 12.13 4.66 42.61 3.86
2257 10692 0.031449 GGAGTAGCTAGCCGCAGAAG 59.969 60.000 12.13 0.00 42.61 2.85
2258 10693 0.395862 AGGAGTAGCTAGCCGCAGAA 60.396 55.000 12.13 0.00 42.61 3.02
2260 10695 0.878416 CTAGGAGTAGCTAGCCGCAG 59.122 60.000 12.13 0.00 42.61 5.18
2261 10696 0.472898 TCTAGGAGTAGCTAGCCGCA 59.527 55.000 12.13 0.00 42.61 5.69
2262 10697 0.876399 GTCTAGGAGTAGCTAGCCGC 59.124 60.000 12.13 4.40 39.57 6.53
2264 10699 2.660670 TGGTCTAGGAGTAGCTAGCC 57.339 55.000 12.13 0.00 0.00 3.93
2285 10723 3.673746 TGCTTTCGTTATGCATGTAGC 57.326 42.857 10.16 9.13 45.96 3.58
2325 10767 7.129109 ACGTGTTAGGTTTAATCTTGTCATG 57.871 36.000 0.00 0.00 0.00 3.07
2326 10768 7.739498 AACGTGTTAGGTTTAATCTTGTCAT 57.261 32.000 0.00 0.00 0.00 3.06
2327 10769 7.556733 AAACGTGTTAGGTTTAATCTTGTCA 57.443 32.000 0.00 0.00 34.82 3.58
2328 10770 8.340443 AGAAAACGTGTTAGGTTTAATCTTGTC 58.660 33.333 0.00 0.00 35.43 3.18
2329 10771 8.217131 AGAAAACGTGTTAGGTTTAATCTTGT 57.783 30.769 0.00 0.00 35.43 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.