Multiple sequence alignment - TraesCS3B01G217600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G217600 chr3B 100.000 3230 0 0 1 3230 260356627 260353398 0.000000e+00 5965.0
1 TraesCS3B01G217600 chr3D 94.565 1288 52 5 1212 2498 182084691 182083421 0.000000e+00 1975.0
2 TraesCS3B01G217600 chr3D 88.021 576 18 8 667 1218 182092401 182091853 4.550000e-178 634.0
3 TraesCS3B01G217600 chr1A 99.400 667 4 0 1 667 547347426 547346760 0.000000e+00 1210.0
4 TraesCS3B01G217600 chr6B 99.100 667 6 0 1 667 90956977 90957643 0.000000e+00 1199.0
5 TraesCS3B01G217600 chr6B 76.954 742 151 14 1273 2001 472301712 472302446 3.880000e-109 405.0
6 TraesCS3B01G217600 chr2B 98.801 667 8 0 1 667 711158357 711159023 0.000000e+00 1188.0
7 TraesCS3B01G217600 chr4A 97.904 668 14 0 1 668 735568984 735569651 0.000000e+00 1157.0
8 TraesCS3B01G217600 chr4A 91.837 49 4 0 663 711 467684256 467684304 5.780000e-08 69.4
9 TraesCS3B01G217600 chr5B 97.301 667 18 0 1 667 422070198 422070864 0.000000e+00 1133.0
10 TraesCS3B01G217600 chr5B 90.269 668 64 1 1 668 441679538 441680204 0.000000e+00 872.0
11 TraesCS3B01G217600 chr7B 88.756 667 75 0 1 667 658130396 658131062 0.000000e+00 817.0
12 TraesCS3B01G217600 chr3A 96.727 275 9 0 1020 1294 229153762 229153488 2.940000e-125 459.0
13 TraesCS3B01G217600 chr3A 87.363 364 38 4 662 1020 229156599 229156239 8.340000e-111 411.0
14 TraesCS3B01G217600 chr3A 95.000 40 2 0 672 711 721449117 721449156 2.690000e-06 63.9
15 TraesCS3B01G217600 chr6D 77.315 745 143 21 1273 2001 304995192 304994458 1.790000e-112 416.0
16 TraesCS3B01G217600 chr6D 87.037 54 4 3 669 720 467788007 467787955 1.250000e-04 58.4
17 TraesCS3B01G217600 chr6A 74.036 674 152 15 1253 1913 410231644 410232307 1.490000e-63 254.0
18 TraesCS3B01G217600 chr7A 73.051 731 162 23 1292 1997 536988968 536988248 3.240000e-55 226.0
19 TraesCS3B01G217600 chr7A 86.364 88 10 2 2591 2678 514701914 514701829 9.540000e-16 95.3
20 TraesCS3B01G217600 chr7A 86.047 86 10 2 2593 2678 691521029 691520946 1.230000e-14 91.6
21 TraesCS3B01G217600 chr7D 73.920 602 129 24 1292 1867 463257134 463257733 1.950000e-52 217.0
22 TraesCS3B01G217600 chr2A 86.047 86 10 2 2593 2678 445581426 445581343 1.230000e-14 91.6
23 TraesCS3B01G217600 chr5D 85.366 82 10 2 2592 2673 482655285 482655364 2.060000e-12 84.2
24 TraesCS3B01G217600 chr4D 91.837 49 4 0 663 711 108628625 108628577 5.780000e-08 69.4
25 TraesCS3B01G217600 chr4D 91.837 49 4 0 663 711 280179758 280179806 5.780000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G217600 chr3B 260353398 260356627 3229 True 5965 5965 100.000 1 3230 1 chr3B.!!$R1 3229
1 TraesCS3B01G217600 chr3D 182083421 182084691 1270 True 1975 1975 94.565 1212 2498 1 chr3D.!!$R1 1286
2 TraesCS3B01G217600 chr3D 182091853 182092401 548 True 634 634 88.021 667 1218 1 chr3D.!!$R2 551
3 TraesCS3B01G217600 chr1A 547346760 547347426 666 True 1210 1210 99.400 1 667 1 chr1A.!!$R1 666
4 TraesCS3B01G217600 chr6B 90956977 90957643 666 False 1199 1199 99.100 1 667 1 chr6B.!!$F1 666
5 TraesCS3B01G217600 chr6B 472301712 472302446 734 False 405 405 76.954 1273 2001 1 chr6B.!!$F2 728
6 TraesCS3B01G217600 chr2B 711158357 711159023 666 False 1188 1188 98.801 1 667 1 chr2B.!!$F1 666
7 TraesCS3B01G217600 chr4A 735568984 735569651 667 False 1157 1157 97.904 1 668 1 chr4A.!!$F2 667
8 TraesCS3B01G217600 chr5B 422070198 422070864 666 False 1133 1133 97.301 1 667 1 chr5B.!!$F1 666
9 TraesCS3B01G217600 chr5B 441679538 441680204 666 False 872 872 90.269 1 668 1 chr5B.!!$F2 667
10 TraesCS3B01G217600 chr7B 658130396 658131062 666 False 817 817 88.756 1 667 1 chr7B.!!$F1 666
11 TraesCS3B01G217600 chr3A 229153488 229156599 3111 True 435 459 92.045 662 1294 2 chr3A.!!$R1 632
12 TraesCS3B01G217600 chr6D 304994458 304995192 734 True 416 416 77.315 1273 2001 1 chr6D.!!$R1 728
13 TraesCS3B01G217600 chr6A 410231644 410232307 663 False 254 254 74.036 1253 1913 1 chr6A.!!$F1 660
14 TraesCS3B01G217600 chr7A 536988248 536988968 720 True 226 226 73.051 1292 1997 1 chr7A.!!$R2 705
15 TraesCS3B01G217600 chr7D 463257134 463257733 599 False 217 217 73.920 1292 1867 1 chr7D.!!$F1 575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
314 315 0.392998 CTGAGGTTTACGCCATGGCT 60.393 55.0 33.07 21.97 39.32 4.75 F
894 916 0.452585 GCTCTGTCCCGTCTGTCTAC 59.547 60.0 0.00 0.00 0.00 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 4705 1.154225 CGGAATTGGAACGCTGCAC 60.154 57.895 0.00 0.0 0.0 4.57 R
2654 5184 0.029433 TGAGATCCGCGTCGAATCAG 59.971 55.000 4.92 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
314 315 0.392998 CTGAGGTTTACGCCATGGCT 60.393 55.000 33.07 21.97 39.32 4.75
733 734 6.297694 GACGATACTAGTATTGTCCGTCTT 57.702 41.667 34.71 15.83 45.08 3.01
734 735 6.690194 ACGATACTAGTATTGTCCGTCTTT 57.310 37.500 24.55 5.20 35.77 2.52
735 736 7.093322 ACGATACTAGTATTGTCCGTCTTTT 57.907 36.000 24.55 4.58 35.77 2.27
736 737 7.542025 ACGATACTAGTATTGTCCGTCTTTTT 58.458 34.615 24.55 3.97 35.77 1.94
737 738 7.699812 ACGATACTAGTATTGTCCGTCTTTTTC 59.300 37.037 24.55 5.40 35.77 2.29
810 832 5.007724 CCAAATAGACCATAGTTTTCTCCGC 59.992 44.000 0.00 0.00 0.00 5.54
882 904 0.898320 TTGCTAGTCTGGGCTCTGTC 59.102 55.000 0.00 0.00 0.00 3.51
894 916 0.452585 GCTCTGTCCCGTCTGTCTAC 59.547 60.000 0.00 0.00 0.00 2.59
939 961 1.908066 GCGGCCCTCAACAACTTACG 61.908 60.000 0.00 0.00 0.00 3.18
960 985 3.553511 CGAGAGTTTCCCTCATCAAATCG 59.446 47.826 0.00 0.00 43.12 3.34
994 1019 5.105567 AGAACTTAGGAGAGAGATCGTGA 57.894 43.478 0.00 0.00 0.00 4.35
1153 3655 3.231734 CAAGACATGGACGCCTTCA 57.768 52.632 0.00 0.00 0.00 3.02
1486 4009 2.505982 CCATCTGCCCCTACACGG 59.494 66.667 0.00 0.00 0.00 4.94
1701 4230 4.452733 GCTAAGGGCGCCGACAGT 62.453 66.667 22.54 5.74 0.00 3.55
2066 4595 7.400599 AAGATGATGCAGCTTCAAATTCTAA 57.599 32.000 18.64 0.00 34.96 2.10
2118 4647 3.061697 GGGCATACGAACTTAAGAACGTG 59.938 47.826 27.33 18.62 39.28 4.49
2135 4664 1.000359 TGTCTGGGCCATCTCTCGA 60.000 57.895 6.72 0.00 0.00 4.04
2176 4705 0.999406 CAGTGGAAATCGGCGTACAG 59.001 55.000 6.85 0.00 0.00 2.74
2206 4735 1.476110 CCAATTCCGGGCCGATTTCTA 60.476 52.381 30.79 5.76 0.00 2.10
2211 4740 2.237751 CGGGCCGATTTCTAGTGCG 61.238 63.158 24.41 0.00 0.00 5.34
2218 4747 2.617308 CCGATTTCTAGTGCGAGAGGTA 59.383 50.000 0.00 0.00 0.00 3.08
2231 4760 4.161565 TGCGAGAGGTAGTTGGTATTGAAT 59.838 41.667 0.00 0.00 0.00 2.57
2239 4768 8.823220 AGGTAGTTGGTATTGAATTAGCAAAT 57.177 30.769 2.62 2.62 40.21 2.32
2262 4791 3.443054 GCGTGTGCGTTACAATAGAAA 57.557 42.857 0.00 0.00 41.89 2.52
2307 4837 6.919721 TGTCAATAAAACATGGCTAAAGTCC 58.080 36.000 0.00 0.00 0.00 3.85
2313 4843 3.959495 ACATGGCTAAAGTCCCATCAT 57.041 42.857 0.00 0.00 39.76 2.45
2318 4848 7.526041 ACATGGCTAAAGTCCCATCATAAATA 58.474 34.615 0.00 0.00 39.76 1.40
2341 4871 6.985188 ACATATCTTGTATGTCAACACCAC 57.015 37.500 0.00 0.00 36.57 4.16
2342 4872 5.580691 ACATATCTTGTATGTCAACACCACG 59.419 40.000 0.00 0.00 36.57 4.94
2349 4879 0.741574 TGTCAACACCACGTCACACC 60.742 55.000 0.00 0.00 0.00 4.16
2382 4912 0.393537 TACTCCTTCCGACCCTCGTC 60.394 60.000 0.00 0.00 38.40 4.20
2409 4939 4.073293 TGAGAGTGTTCAAACCCTTCTC 57.927 45.455 9.57 9.57 33.24 2.87
2410 4940 3.454447 TGAGAGTGTTCAAACCCTTCTCA 59.546 43.478 12.89 12.89 36.84 3.27
2411 4941 3.809905 AGAGTGTTCAAACCCTTCTCAC 58.190 45.455 0.00 0.00 0.00 3.51
2426 4956 6.070710 ACCCTTCTCACCTCTAGTTAATGAAC 60.071 42.308 0.00 0.00 35.64 3.18
2451 4981 9.933240 ACTTATACTACTTAATGTCCAGTAGGT 57.067 33.333 10.34 0.00 44.73 3.08
2485 5015 2.221169 CCAGACTGCTAGCAACAACAA 58.779 47.619 19.86 0.00 0.00 2.83
2488 5018 3.065233 CAGACTGCTAGCAACAACAACAA 59.935 43.478 19.86 0.00 0.00 2.83
2498 5028 2.577449 ACAACAACAAAAGCGAAGGG 57.423 45.000 0.00 0.00 0.00 3.95
2499 5029 1.208259 CAACAACAAAAGCGAAGGGC 58.792 50.000 0.00 0.00 44.05 5.19
2516 5046 3.797353 CTAGGCACGCCCATGGGT 61.797 66.667 31.58 13.57 38.33 4.51
2531 5061 2.811799 GGTGCACCCAACAACCAC 59.188 61.111 26.31 0.00 0.00 4.16
2532 5062 2.411290 GTGCACCCAACAACCACG 59.589 61.111 5.22 0.00 0.00 4.94
2533 5063 2.115911 GTGCACCCAACAACCACGA 61.116 57.895 5.22 0.00 0.00 4.35
2534 5064 1.378646 TGCACCCAACAACCACGAA 60.379 52.632 0.00 0.00 0.00 3.85
2535 5065 1.065109 GCACCCAACAACCACGAAC 59.935 57.895 0.00 0.00 0.00 3.95
2536 5066 1.658686 GCACCCAACAACCACGAACA 61.659 55.000 0.00 0.00 0.00 3.18
2537 5067 0.099791 CACCCAACAACCACGAACAC 59.900 55.000 0.00 0.00 0.00 3.32
2538 5068 1.353804 CCCAACAACCACGAACACG 59.646 57.895 0.00 0.00 0.00 4.49
2539 5069 1.298041 CCAACAACCACGAACACGC 60.298 57.895 0.00 0.00 0.00 5.34
2540 5070 1.298041 CAACAACCACGAACACGCC 60.298 57.895 0.00 0.00 0.00 5.68
2541 5071 2.815298 AACAACCACGAACACGCCG 61.815 57.895 0.00 0.00 0.00 6.46
2542 5072 4.659874 CAACCACGAACACGCCGC 62.660 66.667 0.00 0.00 0.00 6.53
2562 5092 2.815647 GCGAAGGCCGACAAGAGG 60.816 66.667 0.00 0.00 41.76 3.69
2563 5093 2.125512 CGAAGGCCGACAAGAGGG 60.126 66.667 0.00 0.00 41.76 4.30
2564 5094 2.943978 CGAAGGCCGACAAGAGGGT 61.944 63.158 0.00 0.00 41.76 4.34
2565 5095 1.375326 GAAGGCCGACAAGAGGGTT 59.625 57.895 0.00 0.00 0.00 4.11
2566 5096 0.611714 GAAGGCCGACAAGAGGGTTA 59.388 55.000 0.00 0.00 0.00 2.85
2567 5097 0.323957 AAGGCCGACAAGAGGGTTAC 59.676 55.000 0.00 0.00 0.00 2.50
2568 5098 0.834687 AGGCCGACAAGAGGGTTACA 60.835 55.000 0.00 0.00 0.00 2.41
2569 5099 0.672711 GGCCGACAAGAGGGTTACAC 60.673 60.000 0.00 0.00 0.00 2.90
2570 5100 0.034337 GCCGACAAGAGGGTTACACA 59.966 55.000 0.00 0.00 0.00 3.72
2571 5101 1.338769 GCCGACAAGAGGGTTACACAT 60.339 52.381 0.00 0.00 0.00 3.21
2572 5102 2.874457 GCCGACAAGAGGGTTACACATT 60.874 50.000 0.00 0.00 0.00 2.71
2573 5103 3.618019 GCCGACAAGAGGGTTACACATTA 60.618 47.826 0.00 0.00 0.00 1.90
2574 5104 4.766375 CCGACAAGAGGGTTACACATTAT 58.234 43.478 0.00 0.00 0.00 1.28
2575 5105 5.183228 CCGACAAGAGGGTTACACATTATT 58.817 41.667 0.00 0.00 0.00 1.40
2576 5106 6.342906 CCGACAAGAGGGTTACACATTATTA 58.657 40.000 0.00 0.00 0.00 0.98
2577 5107 6.990349 CCGACAAGAGGGTTACACATTATTAT 59.010 38.462 0.00 0.00 0.00 1.28
2578 5108 8.145767 CCGACAAGAGGGTTACACATTATTATA 58.854 37.037 0.00 0.00 0.00 0.98
2579 5109 9.537192 CGACAAGAGGGTTACACATTATTATAA 57.463 33.333 0.00 0.00 0.00 0.98
2629 5159 7.912949 TTTCAGTCATCTGTTTTTGAATTCG 57.087 32.000 0.04 0.00 41.91 3.34
2630 5160 5.451908 TCAGTCATCTGTTTTTGAATTCGC 58.548 37.500 0.04 0.00 41.91 4.70
2631 5161 5.239306 TCAGTCATCTGTTTTTGAATTCGCT 59.761 36.000 0.04 0.00 41.91 4.93
2632 5162 5.916883 CAGTCATCTGTTTTTGAATTCGCTT 59.083 36.000 0.04 0.00 36.97 4.68
2633 5163 6.087291 CAGTCATCTGTTTTTGAATTCGCTTC 59.913 38.462 0.04 0.00 36.97 3.86
2634 5164 5.914635 GTCATCTGTTTTTGAATTCGCTTCA 59.085 36.000 0.04 0.00 42.15 3.02
2635 5165 6.087291 GTCATCTGTTTTTGAATTCGCTTCAG 59.913 38.462 0.04 6.14 44.48 3.02
2636 5166 4.858935 TCTGTTTTTGAATTCGCTTCAGG 58.141 39.130 0.04 0.00 44.48 3.86
2637 5167 4.338118 TCTGTTTTTGAATTCGCTTCAGGT 59.662 37.500 0.04 0.00 44.48 4.00
2638 5168 4.606961 TGTTTTTGAATTCGCTTCAGGTC 58.393 39.130 0.04 0.00 44.48 3.85
2639 5169 3.536158 TTTTGAATTCGCTTCAGGTCG 57.464 42.857 0.04 0.00 44.48 4.79
2640 5170 2.448926 TTGAATTCGCTTCAGGTCGA 57.551 45.000 0.04 0.00 44.48 4.20
2641 5171 2.448926 TGAATTCGCTTCAGGTCGAA 57.551 45.000 0.04 0.00 46.68 3.71
2646 5176 3.536158 TTCGCTTCAGGTCGAATTTTG 57.464 42.857 0.00 0.00 39.43 2.44
2647 5177 2.489971 TCGCTTCAGGTCGAATTTTGT 58.510 42.857 0.00 0.00 31.69 2.83
2648 5178 2.223144 TCGCTTCAGGTCGAATTTTGTG 59.777 45.455 0.00 0.00 31.69 3.33
2649 5179 2.223144 CGCTTCAGGTCGAATTTTGTGA 59.777 45.455 0.00 0.00 31.69 3.58
2650 5180 3.555518 GCTTCAGGTCGAATTTTGTGAC 58.444 45.455 0.00 0.00 31.69 3.67
2654 5184 2.589338 GGTCGAATTTTGTGACCGTC 57.411 50.000 0.00 0.00 42.42 4.79
2655 5185 2.140717 GGTCGAATTTTGTGACCGTCT 58.859 47.619 0.00 0.00 42.42 4.18
2656 5186 2.096417 GGTCGAATTTTGTGACCGTCTG 60.096 50.000 0.00 0.00 42.42 3.51
2657 5187 2.798283 GTCGAATTTTGTGACCGTCTGA 59.202 45.455 0.00 0.00 0.00 3.27
2658 5188 3.432252 GTCGAATTTTGTGACCGTCTGAT 59.568 43.478 0.00 0.00 0.00 2.90
2659 5189 4.062293 TCGAATTTTGTGACCGTCTGATT 58.938 39.130 0.00 0.00 0.00 2.57
2660 5190 4.151689 TCGAATTTTGTGACCGTCTGATTC 59.848 41.667 0.00 2.58 0.00 2.52
2661 5191 4.394795 GAATTTTGTGACCGTCTGATTCG 58.605 43.478 0.00 0.00 0.00 3.34
2662 5192 2.804697 TTTGTGACCGTCTGATTCGA 57.195 45.000 0.00 0.00 0.00 3.71
2663 5193 2.060326 TTGTGACCGTCTGATTCGAC 57.940 50.000 0.00 0.00 0.00 4.20
2669 5199 4.711980 GTCTGATTCGACGCGGAT 57.288 55.556 12.47 0.00 0.00 4.18
2670 5200 2.496718 GTCTGATTCGACGCGGATC 58.503 57.895 12.47 11.95 41.74 3.36
2671 5201 0.029567 GTCTGATTCGACGCGGATCT 59.970 55.000 12.47 0.00 41.89 2.75
2672 5202 0.308068 TCTGATTCGACGCGGATCTC 59.692 55.000 12.47 0.00 41.89 2.75
2673 5203 0.029433 CTGATTCGACGCGGATCTCA 59.971 55.000 12.47 5.78 41.89 3.27
2674 5204 0.029433 TGATTCGACGCGGATCTCAG 59.971 55.000 12.47 0.00 41.89 3.35
2675 5205 1.272114 GATTCGACGCGGATCTCAGC 61.272 60.000 12.47 0.00 38.67 4.26
2694 5224 3.672293 CACCGCTGTGCCTCAATT 58.328 55.556 0.00 0.00 35.31 2.32
2695 5225 2.853159 CACCGCTGTGCCTCAATTA 58.147 52.632 0.00 0.00 35.31 1.40
2696 5226 1.382522 CACCGCTGTGCCTCAATTAT 58.617 50.000 0.00 0.00 35.31 1.28
2697 5227 1.745087 CACCGCTGTGCCTCAATTATT 59.255 47.619 0.00 0.00 35.31 1.40
2698 5228 2.017049 ACCGCTGTGCCTCAATTATTC 58.983 47.619 0.00 0.00 0.00 1.75
2699 5229 2.292267 CCGCTGTGCCTCAATTATTCT 58.708 47.619 0.00 0.00 0.00 2.40
2700 5230 2.684881 CCGCTGTGCCTCAATTATTCTT 59.315 45.455 0.00 0.00 0.00 2.52
2701 5231 3.876914 CCGCTGTGCCTCAATTATTCTTA 59.123 43.478 0.00 0.00 0.00 2.10
2702 5232 4.516698 CCGCTGTGCCTCAATTATTCTTAT 59.483 41.667 0.00 0.00 0.00 1.73
2703 5233 5.446709 CGCTGTGCCTCAATTATTCTTATG 58.553 41.667 0.00 0.00 0.00 1.90
2704 5234 5.218139 GCTGTGCCTCAATTATTCTTATGC 58.782 41.667 0.00 0.00 0.00 3.14
2705 5235 5.766222 CTGTGCCTCAATTATTCTTATGCC 58.234 41.667 0.00 0.00 0.00 4.40
2706 5236 4.584325 TGTGCCTCAATTATTCTTATGCCC 59.416 41.667 0.00 0.00 0.00 5.36
2707 5237 4.584325 GTGCCTCAATTATTCTTATGCCCA 59.416 41.667 0.00 0.00 0.00 5.36
2708 5238 5.244626 GTGCCTCAATTATTCTTATGCCCAT 59.755 40.000 0.00 0.00 0.00 4.00
2709 5239 5.244402 TGCCTCAATTATTCTTATGCCCATG 59.756 40.000 0.00 0.00 0.00 3.66
2710 5240 5.244626 GCCTCAATTATTCTTATGCCCATGT 59.755 40.000 0.00 0.00 0.00 3.21
2711 5241 6.684686 CCTCAATTATTCTTATGCCCATGTG 58.315 40.000 0.00 0.00 0.00 3.21
2712 5242 6.088016 TCAATTATTCTTATGCCCATGTGC 57.912 37.500 0.00 0.00 0.00 4.57
2713 5243 4.771590 ATTATTCTTATGCCCATGTGCG 57.228 40.909 0.00 0.00 0.00 5.34
2714 5244 2.057137 ATTCTTATGCCCATGTGCGT 57.943 45.000 0.00 0.00 0.00 5.24
2715 5245 1.093972 TTCTTATGCCCATGTGCGTG 58.906 50.000 5.02 0.00 0.00 5.34
2716 5246 0.035534 TCTTATGCCCATGTGCGTGT 60.036 50.000 5.02 0.00 0.00 4.49
2717 5247 0.810648 CTTATGCCCATGTGCGTGTT 59.189 50.000 5.02 0.00 0.00 3.32
2718 5248 0.525311 TTATGCCCATGTGCGTGTTG 59.475 50.000 5.02 0.00 0.00 3.33
2719 5249 1.311651 TATGCCCATGTGCGTGTTGG 61.312 55.000 5.02 0.00 0.00 3.77
2721 5251 4.054825 CCCATGTGCGTGTTGGGC 62.055 66.667 1.42 0.00 43.45 5.36
2722 5252 2.985282 CCATGTGCGTGTTGGGCT 60.985 61.111 0.00 0.00 0.00 5.19
2723 5253 2.563798 CCATGTGCGTGTTGGGCTT 61.564 57.895 0.00 0.00 0.00 4.35
2724 5254 1.081242 CATGTGCGTGTTGGGCTTC 60.081 57.895 0.00 0.00 0.00 3.86
2725 5255 2.616330 ATGTGCGTGTTGGGCTTCG 61.616 57.895 0.00 0.00 0.00 3.79
2726 5256 3.276846 GTGCGTGTTGGGCTTCGT 61.277 61.111 0.00 0.00 0.00 3.85
2727 5257 2.515057 TGCGTGTTGGGCTTCGTT 60.515 55.556 0.00 0.00 0.00 3.85
2728 5258 2.251371 GCGTGTTGGGCTTCGTTC 59.749 61.111 0.00 0.00 0.00 3.95
2729 5259 2.549282 CGTGTTGGGCTTCGTTCG 59.451 61.111 0.00 0.00 0.00 3.95
2730 5260 2.943653 GTGTTGGGCTTCGTTCGG 59.056 61.111 0.00 0.00 0.00 4.30
2731 5261 2.281208 TGTTGGGCTTCGTTCGGG 60.281 61.111 0.00 0.00 0.00 5.14
2732 5262 2.281276 GTTGGGCTTCGTTCGGGT 60.281 61.111 0.00 0.00 0.00 5.28
2733 5263 2.031465 TTGGGCTTCGTTCGGGTC 59.969 61.111 0.00 0.00 0.00 4.46
2734 5264 3.869473 TTGGGCTTCGTTCGGGTCG 62.869 63.158 0.00 0.00 0.00 4.79
2735 5265 4.060038 GGGCTTCGTTCGGGTCGA 62.060 66.667 0.00 0.00 35.50 4.20
2736 5266 2.808321 GGCTTCGTTCGGGTCGAC 60.808 66.667 7.13 7.13 37.05 4.20
2737 5267 3.170585 GCTTCGTTCGGGTCGACG 61.171 66.667 9.92 0.00 37.05 5.12
2738 5268 2.503375 CTTCGTTCGGGTCGACGG 60.503 66.667 9.92 4.07 37.05 4.79
2739 5269 4.705519 TTCGTTCGGGTCGACGGC 62.706 66.667 9.92 0.00 37.05 5.68
2756 5286 3.297620 CCCTGTGGCACAGTTGGC 61.298 66.667 37.43 4.46 44.50 4.52
2762 5292 3.898509 GGCACAGTTGGCGTTGCA 61.899 61.111 0.00 0.00 38.75 4.08
2763 5293 2.336088 GCACAGTTGGCGTTGCAT 59.664 55.556 0.00 0.00 0.00 3.96
2764 5294 1.578926 GCACAGTTGGCGTTGCATA 59.421 52.632 0.00 0.00 0.00 3.14
2765 5295 0.454957 GCACAGTTGGCGTTGCATAG 60.455 55.000 0.00 0.00 0.00 2.23
2766 5296 0.454957 CACAGTTGGCGTTGCATAGC 60.455 55.000 5.46 5.46 0.00 2.97
2767 5297 1.226101 CAGTTGGCGTTGCATAGCG 60.226 57.895 7.66 4.92 0.00 4.26
2768 5298 2.100216 GTTGGCGTTGCATAGCGG 59.900 61.111 7.66 0.00 0.00 5.52
2769 5299 2.046796 TTGGCGTTGCATAGCGGA 60.047 55.556 7.66 0.00 0.00 5.54
2770 5300 2.106074 TTGGCGTTGCATAGCGGAG 61.106 57.895 7.66 0.00 0.00 4.63
2783 5313 3.205395 CGGAGCAGGTGAGGAGAG 58.795 66.667 0.00 0.00 0.00 3.20
2784 5314 2.422231 CGGAGCAGGTGAGGAGAGG 61.422 68.421 0.00 0.00 0.00 3.69
2785 5315 1.305718 GGAGCAGGTGAGGAGAGGT 60.306 63.158 0.00 0.00 0.00 3.85
2786 5316 0.033011 GGAGCAGGTGAGGAGAGGTA 60.033 60.000 0.00 0.00 0.00 3.08
2787 5317 1.398692 GAGCAGGTGAGGAGAGGTAG 58.601 60.000 0.00 0.00 0.00 3.18
2788 5318 0.686112 AGCAGGTGAGGAGAGGTAGC 60.686 60.000 0.00 0.00 0.00 3.58
2789 5319 2.010582 GCAGGTGAGGAGAGGTAGCG 62.011 65.000 0.00 0.00 0.00 4.26
2790 5320 1.755008 AGGTGAGGAGAGGTAGCGC 60.755 63.158 0.00 0.00 0.00 5.92
2791 5321 2.787567 GGTGAGGAGAGGTAGCGCC 61.788 68.421 2.29 0.00 37.58 6.53
2792 5322 2.829003 TGAGGAGAGGTAGCGCCG 60.829 66.667 2.29 0.00 43.70 6.46
2793 5323 2.829458 GAGGAGAGGTAGCGCCGT 60.829 66.667 2.29 0.00 43.70 5.68
2794 5324 3.127352 GAGGAGAGGTAGCGCCGTG 62.127 68.421 2.29 0.00 43.70 4.94
2795 5325 4.208686 GGAGAGGTAGCGCCGTGG 62.209 72.222 2.29 0.00 43.70 4.94
2796 5326 4.874977 GAGAGGTAGCGCCGTGGC 62.875 72.222 2.29 0.00 43.70 5.01
2812 5342 4.388499 GCGGAGGCGTTGGAGGAA 62.388 66.667 0.00 0.00 0.00 3.36
2813 5343 2.125512 CGGAGGCGTTGGAGGAAG 60.126 66.667 0.00 0.00 0.00 3.46
2814 5344 2.269241 GGAGGCGTTGGAGGAAGG 59.731 66.667 0.00 0.00 0.00 3.46
2815 5345 2.436824 GAGGCGTTGGAGGAAGGC 60.437 66.667 0.00 0.00 43.44 4.35
2816 5346 4.394712 AGGCGTTGGAGGAAGGCG 62.395 66.667 0.00 0.00 44.82 5.52
2819 5349 4.394712 CGTTGGAGGAAGGCGCCT 62.395 66.667 27.08 27.08 42.17 5.52
2820 5350 2.987125 GTTGGAGGAAGGCGCCTA 59.013 61.111 33.07 10.49 38.73 3.93
2821 5351 1.298667 GTTGGAGGAAGGCGCCTAA 59.701 57.895 33.07 16.98 38.73 2.69
2822 5352 0.107165 GTTGGAGGAAGGCGCCTAAT 60.107 55.000 33.07 16.62 38.73 1.73
2823 5353 0.180406 TTGGAGGAAGGCGCCTAATC 59.820 55.000 33.07 24.66 38.73 1.75
2824 5354 1.301009 GGAGGAAGGCGCCTAATCG 60.301 63.158 33.07 0.00 38.73 3.34
2832 5362 3.032609 CGCCTAATCGCCGAGCAG 61.033 66.667 0.00 0.00 0.00 4.24
2833 5363 3.341835 GCCTAATCGCCGAGCAGC 61.342 66.667 0.00 0.00 0.00 5.25
2873 5403 4.452733 CGCTGGACGGAGGGAACC 62.453 72.222 0.00 0.00 45.14 3.62
2898 5428 4.096003 GGGCAGCAGCGGTAGGAA 62.096 66.667 0.00 0.00 43.41 3.36
2899 5429 2.512515 GGCAGCAGCGGTAGGAAG 60.513 66.667 0.00 0.00 43.41 3.46
2900 5430 2.512515 GCAGCAGCGGTAGGAAGG 60.513 66.667 0.00 0.00 0.00 3.46
2901 5431 3.019003 GCAGCAGCGGTAGGAAGGA 62.019 63.158 0.00 0.00 0.00 3.36
2902 5432 1.142748 CAGCAGCGGTAGGAAGGAG 59.857 63.158 0.00 0.00 0.00 3.69
2903 5433 1.000486 AGCAGCGGTAGGAAGGAGA 60.000 57.895 0.00 0.00 0.00 3.71
2904 5434 1.040339 AGCAGCGGTAGGAAGGAGAG 61.040 60.000 0.00 0.00 0.00 3.20
2905 5435 1.038130 GCAGCGGTAGGAAGGAGAGA 61.038 60.000 0.00 0.00 0.00 3.10
2906 5436 0.741915 CAGCGGTAGGAAGGAGAGAC 59.258 60.000 0.00 0.00 0.00 3.36
2907 5437 0.748729 AGCGGTAGGAAGGAGAGACG 60.749 60.000 0.00 0.00 0.00 4.18
2908 5438 0.747283 GCGGTAGGAAGGAGAGACGA 60.747 60.000 0.00 0.00 0.00 4.20
2909 5439 1.970092 CGGTAGGAAGGAGAGACGAT 58.030 55.000 0.00 0.00 0.00 3.73
2910 5440 1.604755 CGGTAGGAAGGAGAGACGATG 59.395 57.143 0.00 0.00 0.00 3.84
2911 5441 1.957877 GGTAGGAAGGAGAGACGATGG 59.042 57.143 0.00 0.00 0.00 3.51
2912 5442 2.657143 GTAGGAAGGAGAGACGATGGT 58.343 52.381 0.00 0.00 0.00 3.55
2913 5443 3.434739 GGTAGGAAGGAGAGACGATGGTA 60.435 52.174 0.00 0.00 0.00 3.25
2914 5444 3.603965 AGGAAGGAGAGACGATGGTAT 57.396 47.619 0.00 0.00 0.00 2.73
2915 5445 3.226777 AGGAAGGAGAGACGATGGTATG 58.773 50.000 0.00 0.00 0.00 2.39
2916 5446 2.297597 GGAAGGAGAGACGATGGTATGG 59.702 54.545 0.00 0.00 0.00 2.74
2917 5447 3.223435 GAAGGAGAGACGATGGTATGGA 58.777 50.000 0.00 0.00 0.00 3.41
2918 5448 3.534357 AGGAGAGACGATGGTATGGAT 57.466 47.619 0.00 0.00 0.00 3.41
2919 5449 3.850752 AGGAGAGACGATGGTATGGATT 58.149 45.455 0.00 0.00 0.00 3.01
2920 5450 3.576118 AGGAGAGACGATGGTATGGATTG 59.424 47.826 0.00 0.00 0.00 2.67
2921 5451 3.306364 GGAGAGACGATGGTATGGATTGG 60.306 52.174 0.00 0.00 0.00 3.16
2922 5452 2.634940 AGAGACGATGGTATGGATTGGG 59.365 50.000 0.00 0.00 0.00 4.12
2923 5453 1.699634 AGACGATGGTATGGATTGGGG 59.300 52.381 0.00 0.00 0.00 4.96
2924 5454 1.697432 GACGATGGTATGGATTGGGGA 59.303 52.381 0.00 0.00 0.00 4.81
2925 5455 2.305927 GACGATGGTATGGATTGGGGAT 59.694 50.000 0.00 0.00 0.00 3.85
2926 5456 2.305927 ACGATGGTATGGATTGGGGATC 59.694 50.000 0.00 0.00 0.00 3.36
2927 5457 2.305635 CGATGGTATGGATTGGGGATCA 59.694 50.000 0.00 0.00 36.43 2.92
2928 5458 3.620719 CGATGGTATGGATTGGGGATCAG 60.621 52.174 0.00 0.00 36.43 2.90
2929 5459 1.425066 TGGTATGGATTGGGGATCAGC 59.575 52.381 0.00 0.00 36.43 4.26
2930 5460 1.611673 GGTATGGATTGGGGATCAGCG 60.612 57.143 0.00 0.00 36.43 5.18
2931 5461 0.692476 TATGGATTGGGGATCAGCGG 59.308 55.000 0.00 0.00 36.43 5.52
2932 5462 1.061905 ATGGATTGGGGATCAGCGGA 61.062 55.000 0.00 0.00 36.43 5.54
2933 5463 1.278302 TGGATTGGGGATCAGCGGAA 61.278 55.000 0.00 0.00 36.43 4.30
2934 5464 0.819666 GGATTGGGGATCAGCGGAAC 60.820 60.000 0.00 0.00 36.43 3.62
2935 5465 0.181350 GATTGGGGATCAGCGGAACT 59.819 55.000 0.00 0.00 34.75 3.01
2936 5466 0.181350 ATTGGGGATCAGCGGAACTC 59.819 55.000 0.00 0.00 0.00 3.01
2937 5467 0.909610 TTGGGGATCAGCGGAACTCT 60.910 55.000 0.00 0.00 0.00 3.24
2938 5468 0.032515 TGGGGATCAGCGGAACTCTA 60.033 55.000 0.00 0.00 0.00 2.43
2939 5469 0.389757 GGGGATCAGCGGAACTCTAC 59.610 60.000 0.00 0.00 0.00 2.59
2940 5470 0.389757 GGGATCAGCGGAACTCTACC 59.610 60.000 0.00 0.00 0.00 3.18
2947 5477 2.493501 GGAACTCTACCGACGGGC 59.506 66.667 20.00 0.00 36.48 6.13
2948 5478 2.050934 GGAACTCTACCGACGGGCT 61.051 63.158 20.00 0.00 36.48 5.19
2949 5479 1.432657 GAACTCTACCGACGGGCTC 59.567 63.158 20.00 0.00 36.48 4.70
2950 5480 1.303888 AACTCTACCGACGGGCTCA 60.304 57.895 20.00 0.00 36.48 4.26
2951 5481 0.683504 AACTCTACCGACGGGCTCAT 60.684 55.000 20.00 0.00 36.48 2.90
2952 5482 1.102222 ACTCTACCGACGGGCTCATC 61.102 60.000 20.00 0.00 36.48 2.92
2953 5483 1.077285 TCTACCGACGGGCTCATCA 60.077 57.895 20.00 0.00 36.48 3.07
2954 5484 0.681887 TCTACCGACGGGCTCATCAA 60.682 55.000 20.00 0.00 36.48 2.57
2955 5485 0.527817 CTACCGACGGGCTCATCAAC 60.528 60.000 20.00 0.00 36.48 3.18
2956 5486 0.968901 TACCGACGGGCTCATCAACT 60.969 55.000 20.00 0.00 36.48 3.16
2957 5487 1.811266 CCGACGGGCTCATCAACTG 60.811 63.158 5.81 0.00 0.00 3.16
2958 5488 2.456119 CGACGGGCTCATCAACTGC 61.456 63.158 0.00 0.00 0.00 4.40
2959 5489 1.078848 GACGGGCTCATCAACTGCT 60.079 57.895 0.00 0.00 0.00 4.24
2960 5490 1.078848 ACGGGCTCATCAACTGCTC 60.079 57.895 0.00 0.00 0.00 4.26
2961 5491 2.169789 CGGGCTCATCAACTGCTCG 61.170 63.158 0.00 0.00 44.19 5.03
2962 5492 1.078848 GGGCTCATCAACTGCTCGT 60.079 57.895 0.00 0.00 0.00 4.18
2963 5493 1.086634 GGGCTCATCAACTGCTCGTC 61.087 60.000 0.00 0.00 0.00 4.20
2964 5494 0.390340 GGCTCATCAACTGCTCGTCA 60.390 55.000 0.00 0.00 0.00 4.35
2965 5495 1.649664 GCTCATCAACTGCTCGTCAT 58.350 50.000 0.00 0.00 0.00 3.06
2966 5496 1.326852 GCTCATCAACTGCTCGTCATG 59.673 52.381 0.00 0.00 0.00 3.07
2967 5497 1.931841 CTCATCAACTGCTCGTCATGG 59.068 52.381 0.00 0.00 0.00 3.66
2968 5498 1.012086 CATCAACTGCTCGTCATGGG 58.988 55.000 0.00 0.00 0.00 4.00
2969 5499 0.107508 ATCAACTGCTCGTCATGGGG 60.108 55.000 0.00 0.00 0.00 4.96
2970 5500 1.746615 CAACTGCTCGTCATGGGGG 60.747 63.158 0.00 0.00 0.00 5.40
2987 5517 4.120755 GGCCCTTGAGCTCCCCTG 62.121 72.222 12.15 0.00 0.00 4.45
2988 5518 4.811364 GCCCTTGAGCTCCCCTGC 62.811 72.222 12.15 5.44 0.00 4.85
2995 5525 4.737476 AGCTCCCCTGCTCAGCCT 62.737 66.667 0.00 0.00 39.34 4.58
2996 5526 4.486503 GCTCCCCTGCTCAGCCTG 62.487 72.222 0.00 0.00 0.00 4.85
2997 5527 4.486503 CTCCCCTGCTCAGCCTGC 62.487 72.222 0.00 0.00 0.00 4.85
2999 5529 3.085947 CCCCTGCTCAGCCTGCTA 61.086 66.667 0.00 0.00 0.00 3.49
3000 5530 2.188994 CCCTGCTCAGCCTGCTAC 59.811 66.667 0.00 0.00 0.00 3.58
3001 5531 2.188994 CCTGCTCAGCCTGCTACC 59.811 66.667 0.00 0.00 0.00 3.18
3002 5532 2.663075 CCTGCTCAGCCTGCTACCA 61.663 63.158 0.00 0.00 0.00 3.25
3003 5533 1.525923 CTGCTCAGCCTGCTACCAT 59.474 57.895 0.00 0.00 0.00 3.55
3004 5534 0.107312 CTGCTCAGCCTGCTACCATT 60.107 55.000 0.00 0.00 0.00 3.16
3005 5535 0.329261 TGCTCAGCCTGCTACCATTT 59.671 50.000 0.00 0.00 0.00 2.32
3006 5536 1.272092 TGCTCAGCCTGCTACCATTTT 60.272 47.619 0.00 0.00 0.00 1.82
3007 5537 1.821136 GCTCAGCCTGCTACCATTTTT 59.179 47.619 0.00 0.00 0.00 1.94
3033 5563 4.703897 TGGTAGTTCTTCCACTTCACTTG 58.296 43.478 0.00 0.00 0.00 3.16
3034 5564 4.163458 TGGTAGTTCTTCCACTTCACTTGT 59.837 41.667 0.00 0.00 0.00 3.16
3035 5565 4.750598 GGTAGTTCTTCCACTTCACTTGTC 59.249 45.833 0.00 0.00 0.00 3.18
3036 5566 4.487714 AGTTCTTCCACTTCACTTGTCA 57.512 40.909 0.00 0.00 0.00 3.58
3037 5567 5.041191 AGTTCTTCCACTTCACTTGTCAT 57.959 39.130 0.00 0.00 0.00 3.06
3038 5568 5.440610 AGTTCTTCCACTTCACTTGTCATT 58.559 37.500 0.00 0.00 0.00 2.57
3039 5569 5.529060 AGTTCTTCCACTTCACTTGTCATTC 59.471 40.000 0.00 0.00 0.00 2.67
3040 5570 5.034852 TCTTCCACTTCACTTGTCATTCA 57.965 39.130 0.00 0.00 0.00 2.57
3041 5571 5.059161 TCTTCCACTTCACTTGTCATTCAG 58.941 41.667 0.00 0.00 0.00 3.02
3042 5572 3.141398 TCCACTTCACTTGTCATTCAGC 58.859 45.455 0.00 0.00 0.00 4.26
3043 5573 2.227388 CCACTTCACTTGTCATTCAGCC 59.773 50.000 0.00 0.00 0.00 4.85
3044 5574 2.880268 CACTTCACTTGTCATTCAGCCA 59.120 45.455 0.00 0.00 0.00 4.75
3045 5575 3.504906 CACTTCACTTGTCATTCAGCCAT 59.495 43.478 0.00 0.00 0.00 4.40
3046 5576 4.022589 CACTTCACTTGTCATTCAGCCATT 60.023 41.667 0.00 0.00 0.00 3.16
3047 5577 5.181811 CACTTCACTTGTCATTCAGCCATTA 59.818 40.000 0.00 0.00 0.00 1.90
3048 5578 5.182001 ACTTCACTTGTCATTCAGCCATTAC 59.818 40.000 0.00 0.00 0.00 1.89
3049 5579 4.910195 TCACTTGTCATTCAGCCATTACT 58.090 39.130 0.00 0.00 0.00 2.24
3050 5580 5.316167 TCACTTGTCATTCAGCCATTACTT 58.684 37.500 0.00 0.00 0.00 2.24
3051 5581 6.472016 TCACTTGTCATTCAGCCATTACTTA 58.528 36.000 0.00 0.00 0.00 2.24
3052 5582 7.112122 TCACTTGTCATTCAGCCATTACTTAT 58.888 34.615 0.00 0.00 0.00 1.73
3053 5583 7.611467 TCACTTGTCATTCAGCCATTACTTATT 59.389 33.333 0.00 0.00 0.00 1.40
3054 5584 7.912250 CACTTGTCATTCAGCCATTACTTATTC 59.088 37.037 0.00 0.00 0.00 1.75
3055 5585 7.611467 ACTTGTCATTCAGCCATTACTTATTCA 59.389 33.333 0.00 0.00 0.00 2.57
3056 5586 7.558161 TGTCATTCAGCCATTACTTATTCAG 57.442 36.000 0.00 0.00 0.00 3.02
3057 5587 7.337938 TGTCATTCAGCCATTACTTATTCAGA 58.662 34.615 0.00 0.00 0.00 3.27
3058 5588 7.994911 TGTCATTCAGCCATTACTTATTCAGAT 59.005 33.333 0.00 0.00 0.00 2.90
3059 5589 8.844244 GTCATTCAGCCATTACTTATTCAGATT 58.156 33.333 0.00 0.00 0.00 2.40
3060 5590 9.412460 TCATTCAGCCATTACTTATTCAGATTT 57.588 29.630 0.00 0.00 0.00 2.17
3064 5594 8.397906 TCAGCCATTACTTATTCAGATTTTTCG 58.602 33.333 0.00 0.00 0.00 3.46
3065 5595 8.184192 CAGCCATTACTTATTCAGATTTTTCGT 58.816 33.333 0.00 0.00 0.00 3.85
3066 5596 8.398665 AGCCATTACTTATTCAGATTTTTCGTC 58.601 33.333 0.00 0.00 0.00 4.20
3067 5597 8.181573 GCCATTACTTATTCAGATTTTTCGTCA 58.818 33.333 0.00 0.00 0.00 4.35
3068 5598 9.708222 CCATTACTTATTCAGATTTTTCGTCAG 57.292 33.333 0.00 0.00 0.00 3.51
3106 5636 8.806177 TTTCTGTCATTTTTCATTCAGTCATG 57.194 30.769 0.00 0.00 0.00 3.07
3107 5637 7.748691 TCTGTCATTTTTCATTCAGTCATGA 57.251 32.000 0.00 0.00 0.00 3.07
3108 5638 7.813645 TCTGTCATTTTTCATTCAGTCATGAG 58.186 34.615 0.00 0.00 36.61 2.90
3109 5639 6.384224 TGTCATTTTTCATTCAGTCATGAGC 58.616 36.000 0.00 0.00 36.61 4.26
3110 5640 6.208007 TGTCATTTTTCATTCAGTCATGAGCT 59.792 34.615 0.00 0.00 36.61 4.09
3111 5641 6.746364 GTCATTTTTCATTCAGTCATGAGCTC 59.254 38.462 6.82 6.82 36.61 4.09
3112 5642 6.657966 TCATTTTTCATTCAGTCATGAGCTCT 59.342 34.615 16.19 0.00 36.61 4.09
3113 5643 6.889301 TTTTTCATTCAGTCATGAGCTCTT 57.111 33.333 16.19 5.66 36.61 2.85
3114 5644 6.492007 TTTTCATTCAGTCATGAGCTCTTC 57.508 37.500 16.19 2.81 36.61 2.87
3115 5645 4.813750 TCATTCAGTCATGAGCTCTTCA 57.186 40.909 16.19 0.00 40.85 3.02
3116 5646 4.756502 TCATTCAGTCATGAGCTCTTCAG 58.243 43.478 16.19 2.19 39.68 3.02
3117 5647 4.222366 TCATTCAGTCATGAGCTCTTCAGT 59.778 41.667 16.19 0.00 39.68 3.41
3118 5648 4.613925 TTCAGTCATGAGCTCTTCAGTT 57.386 40.909 16.19 0.00 39.68 3.16
3119 5649 4.185467 TCAGTCATGAGCTCTTCAGTTC 57.815 45.455 16.19 0.00 39.68 3.01
3120 5650 3.575687 TCAGTCATGAGCTCTTCAGTTCA 59.424 43.478 16.19 0.00 43.34 3.18
3121 5651 4.039609 TCAGTCATGAGCTCTTCAGTTCAA 59.960 41.667 16.19 0.00 42.55 2.69
3122 5652 4.936411 CAGTCATGAGCTCTTCAGTTCAAT 59.064 41.667 16.19 0.00 42.55 2.57
3123 5653 5.411977 CAGTCATGAGCTCTTCAGTTCAATT 59.588 40.000 16.19 0.00 42.55 2.32
3124 5654 6.592994 CAGTCATGAGCTCTTCAGTTCAATTA 59.407 38.462 16.19 0.00 42.55 1.40
3125 5655 7.118825 CAGTCATGAGCTCTTCAGTTCAATTAA 59.881 37.037 16.19 0.00 42.55 1.40
3126 5656 7.118971 AGTCATGAGCTCTTCAGTTCAATTAAC 59.881 37.037 16.19 0.00 42.55 2.01
3127 5657 6.936335 TCATGAGCTCTTCAGTTCAATTAACA 59.064 34.615 16.19 0.00 42.55 2.41
3128 5658 7.445096 TCATGAGCTCTTCAGTTCAATTAACAA 59.555 33.333 16.19 0.00 42.55 2.83
3129 5659 7.750229 TGAGCTCTTCAGTTCAATTAACAAT 57.250 32.000 16.19 0.00 36.96 2.71
3130 5660 8.169977 TGAGCTCTTCAGTTCAATTAACAATT 57.830 30.769 16.19 0.00 36.96 2.32
3131 5661 8.632679 TGAGCTCTTCAGTTCAATTAACAATTT 58.367 29.630 16.19 0.00 36.96 1.82
3132 5662 9.122613 GAGCTCTTCAGTTCAATTAACAATTTC 57.877 33.333 6.43 0.00 40.83 2.17
3133 5663 8.632679 AGCTCTTCAGTTCAATTAACAATTTCA 58.367 29.630 0.00 0.00 40.83 2.69
3134 5664 9.248291 GCTCTTCAGTTCAATTAACAATTTCAA 57.752 29.630 0.00 0.00 40.83 2.69
3146 5676 9.927668 AATTAACAATTTCAATGAATCTTCCGT 57.072 25.926 0.00 0.00 0.00 4.69
3147 5677 9.927668 ATTAACAATTTCAATGAATCTTCCGTT 57.072 25.926 0.00 0.00 0.00 4.44
3148 5678 9.757227 TTAACAATTTCAATGAATCTTCCGTTT 57.243 25.926 0.00 0.00 0.00 3.60
3150 5680 8.970691 ACAATTTCAATGAATCTTCCGTTTAG 57.029 30.769 0.00 0.00 0.00 1.85
3151 5681 8.576442 ACAATTTCAATGAATCTTCCGTTTAGT 58.424 29.630 0.00 0.00 0.00 2.24
3152 5682 9.410556 CAATTTCAATGAATCTTCCGTTTAGTT 57.589 29.630 0.00 0.00 0.00 2.24
3153 5683 9.626045 AATTTCAATGAATCTTCCGTTTAGTTC 57.374 29.630 0.00 0.00 0.00 3.01
3154 5684 7.737972 TTCAATGAATCTTCCGTTTAGTTCA 57.262 32.000 0.00 0.00 0.00 3.18
3155 5685 7.364522 TCAATGAATCTTCCGTTTAGTTCAG 57.635 36.000 0.00 0.00 0.00 3.02
3156 5686 6.934645 TCAATGAATCTTCCGTTTAGTTCAGT 59.065 34.615 0.00 0.00 0.00 3.41
3157 5687 6.969828 ATGAATCTTCCGTTTAGTTCAGTC 57.030 37.500 0.00 0.00 0.00 3.51
3158 5688 6.097915 TGAATCTTCCGTTTAGTTCAGTCT 57.902 37.500 0.00 0.00 0.00 3.24
3159 5689 6.157211 TGAATCTTCCGTTTAGTTCAGTCTC 58.843 40.000 0.00 0.00 0.00 3.36
3160 5690 4.516365 TCTTCCGTTTAGTTCAGTCTCC 57.484 45.455 0.00 0.00 0.00 3.71
3161 5691 3.893200 TCTTCCGTTTAGTTCAGTCTCCA 59.107 43.478 0.00 0.00 0.00 3.86
3162 5692 3.936372 TCCGTTTAGTTCAGTCTCCAG 57.064 47.619 0.00 0.00 0.00 3.86
3163 5693 3.228453 TCCGTTTAGTTCAGTCTCCAGT 58.772 45.455 0.00 0.00 0.00 4.00
3164 5694 3.640029 TCCGTTTAGTTCAGTCTCCAGTT 59.360 43.478 0.00 0.00 0.00 3.16
3165 5695 4.100498 TCCGTTTAGTTCAGTCTCCAGTTT 59.900 41.667 0.00 0.00 0.00 2.66
3166 5696 4.448060 CCGTTTAGTTCAGTCTCCAGTTTC 59.552 45.833 0.00 0.00 0.00 2.78
3167 5697 5.047847 CGTTTAGTTCAGTCTCCAGTTTCA 58.952 41.667 0.00 0.00 0.00 2.69
3168 5698 5.522460 CGTTTAGTTCAGTCTCCAGTTTCAA 59.478 40.000 0.00 0.00 0.00 2.69
3169 5699 6.202954 CGTTTAGTTCAGTCTCCAGTTTCAAT 59.797 38.462 0.00 0.00 0.00 2.57
3170 5700 7.569591 CGTTTAGTTCAGTCTCCAGTTTCAATC 60.570 40.741 0.00 0.00 0.00 2.67
3171 5701 5.296151 AGTTCAGTCTCCAGTTTCAATCA 57.704 39.130 0.00 0.00 0.00 2.57
3172 5702 5.874093 AGTTCAGTCTCCAGTTTCAATCAT 58.126 37.500 0.00 0.00 0.00 2.45
3173 5703 7.009179 AGTTCAGTCTCCAGTTTCAATCATA 57.991 36.000 0.00 0.00 0.00 2.15
3174 5704 7.628234 AGTTCAGTCTCCAGTTTCAATCATAT 58.372 34.615 0.00 0.00 0.00 1.78
3175 5705 8.105829 AGTTCAGTCTCCAGTTTCAATCATATT 58.894 33.333 0.00 0.00 0.00 1.28
3176 5706 8.394121 GTTCAGTCTCCAGTTTCAATCATATTC 58.606 37.037 0.00 0.00 0.00 1.75
3177 5707 7.623630 TCAGTCTCCAGTTTCAATCATATTCA 58.376 34.615 0.00 0.00 0.00 2.57
3178 5708 7.767659 TCAGTCTCCAGTTTCAATCATATTCAG 59.232 37.037 0.00 0.00 0.00 3.02
3179 5709 7.551974 CAGTCTCCAGTTTCAATCATATTCAGT 59.448 37.037 0.00 0.00 0.00 3.41
3180 5710 8.105829 AGTCTCCAGTTTCAATCATATTCAGTT 58.894 33.333 0.00 0.00 0.00 3.16
3181 5711 9.383519 GTCTCCAGTTTCAATCATATTCAGTTA 57.616 33.333 0.00 0.00 0.00 2.24
3182 5712 9.958180 TCTCCAGTTTCAATCATATTCAGTTAA 57.042 29.630 0.00 0.00 0.00 2.01
3191 5721 9.045223 TCAATCATATTCAGTTAAATCACTCGG 57.955 33.333 0.00 0.00 0.00 4.63
3192 5722 8.830580 CAATCATATTCAGTTAAATCACTCGGT 58.169 33.333 0.00 0.00 0.00 4.69
3193 5723 8.594881 ATCATATTCAGTTAAATCACTCGGTC 57.405 34.615 0.00 0.00 0.00 4.79
3194 5724 7.552459 TCATATTCAGTTAAATCACTCGGTCA 58.448 34.615 0.00 0.00 0.00 4.02
3195 5725 8.204160 TCATATTCAGTTAAATCACTCGGTCAT 58.796 33.333 0.00 0.00 0.00 3.06
3196 5726 9.476202 CATATTCAGTTAAATCACTCGGTCATA 57.524 33.333 0.00 0.00 0.00 2.15
3198 5728 8.964476 ATTCAGTTAAATCACTCGGTCATATT 57.036 30.769 0.00 0.00 0.00 1.28
3199 5729 8.420374 TTCAGTTAAATCACTCGGTCATATTC 57.580 34.615 0.00 0.00 0.00 1.75
3200 5730 6.695713 TCAGTTAAATCACTCGGTCATATTCG 59.304 38.462 0.00 0.00 0.00 3.34
3201 5731 5.983720 AGTTAAATCACTCGGTCATATTCGG 59.016 40.000 0.00 0.00 0.00 4.30
3202 5732 4.402056 AAATCACTCGGTCATATTCGGT 57.598 40.909 0.00 0.00 0.00 4.69
3203 5733 4.402056 AATCACTCGGTCATATTCGGTT 57.598 40.909 0.00 0.00 0.00 4.44
3204 5734 3.880047 TCACTCGGTCATATTCGGTTT 57.120 42.857 0.00 0.00 0.00 3.27
3205 5735 3.777478 TCACTCGGTCATATTCGGTTTC 58.223 45.455 0.00 0.00 0.00 2.78
3206 5736 3.446161 TCACTCGGTCATATTCGGTTTCT 59.554 43.478 0.00 0.00 0.00 2.52
3207 5737 4.081862 TCACTCGGTCATATTCGGTTTCTT 60.082 41.667 0.00 0.00 0.00 2.52
3208 5738 4.630069 CACTCGGTCATATTCGGTTTCTTT 59.370 41.667 0.00 0.00 0.00 2.52
3209 5739 5.121768 CACTCGGTCATATTCGGTTTCTTTT 59.878 40.000 0.00 0.00 0.00 2.27
3210 5740 5.121768 ACTCGGTCATATTCGGTTTCTTTTG 59.878 40.000 0.00 0.00 0.00 2.44
3211 5741 4.998672 TCGGTCATATTCGGTTTCTTTTGT 59.001 37.500 0.00 0.00 0.00 2.83
3212 5742 5.470777 TCGGTCATATTCGGTTTCTTTTGTT 59.529 36.000 0.00 0.00 0.00 2.83
3213 5743 5.793457 CGGTCATATTCGGTTTCTTTTGTTC 59.207 40.000 0.00 0.00 0.00 3.18
3214 5744 6.348213 CGGTCATATTCGGTTTCTTTTGTTCT 60.348 38.462 0.00 0.00 0.00 3.01
3215 5745 7.368059 GGTCATATTCGGTTTCTTTTGTTCTT 58.632 34.615 0.00 0.00 0.00 2.52
3216 5746 7.537649 GGTCATATTCGGTTTCTTTTGTTCTTC 59.462 37.037 0.00 0.00 0.00 2.87
3217 5747 8.073768 GTCATATTCGGTTTCTTTTGTTCTTCA 58.926 33.333 0.00 0.00 0.00 3.02
3218 5748 8.289618 TCATATTCGGTTTCTTTTGTTCTTCAG 58.710 33.333 0.00 0.00 0.00 3.02
3219 5749 5.890424 TTCGGTTTCTTTTGTTCTTCAGT 57.110 34.783 0.00 0.00 0.00 3.41
3220 5750 5.890424 TCGGTTTCTTTTGTTCTTCAGTT 57.110 34.783 0.00 0.00 0.00 3.16
3221 5751 6.262193 TCGGTTTCTTTTGTTCTTCAGTTT 57.738 33.333 0.00 0.00 0.00 2.66
3222 5752 6.319399 TCGGTTTCTTTTGTTCTTCAGTTTC 58.681 36.000 0.00 0.00 0.00 2.78
3223 5753 6.150474 TCGGTTTCTTTTGTTCTTCAGTTTCT 59.850 34.615 0.00 0.00 0.00 2.52
3224 5754 6.469275 CGGTTTCTTTTGTTCTTCAGTTTCTC 59.531 38.462 0.00 0.00 0.00 2.87
3225 5755 7.312899 GGTTTCTTTTGTTCTTCAGTTTCTCA 58.687 34.615 0.00 0.00 0.00 3.27
3226 5756 7.812669 GGTTTCTTTTGTTCTTCAGTTTCTCAA 59.187 33.333 0.00 0.00 0.00 3.02
3227 5757 9.358872 GTTTCTTTTGTTCTTCAGTTTCTCAAT 57.641 29.630 0.00 0.00 0.00 2.57
3228 5758 9.927668 TTTCTTTTGTTCTTCAGTTTCTCAATT 57.072 25.926 0.00 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.040646 TCCGCTAACTCCCCTTCTCA 59.959 55.000 0.00 0.00 0.00 3.27
771 793 2.074547 TTTGGAGACGGACAATCGAC 57.925 50.000 0.00 0.00 0.00 4.20
810 832 6.657836 ACAAAATCGGATTTAACTCTACCG 57.342 37.500 15.80 0.00 44.09 4.02
882 904 0.311165 CGGCTATGTAGACAGACGGG 59.689 60.000 0.00 0.00 39.68 5.28
894 916 2.695055 CAACGTCGTGCGGCTATG 59.305 61.111 0.00 0.00 46.52 2.23
939 961 4.759782 TCGATTTGATGAGGGAAACTCTC 58.240 43.478 0.00 0.00 46.72 3.20
981 1006 3.303725 CCATCTTCGTCACGATCTCTCTC 60.304 52.174 0.00 0.00 35.23 3.20
982 1007 2.616376 CCATCTTCGTCACGATCTCTCT 59.384 50.000 0.00 0.00 35.23 3.10
983 1008 2.614520 TCCATCTTCGTCACGATCTCTC 59.385 50.000 0.00 0.00 35.23 3.20
994 1019 1.449246 GCAGCAGCTCCATCTTCGT 60.449 57.895 0.00 0.00 37.91 3.85
1486 4009 3.431725 GTAGGCCCGTTGCAGCAC 61.432 66.667 0.00 0.00 43.89 4.40
1686 4215 3.291101 GACACTGTCGGCGCCCTTA 62.291 63.158 23.46 3.24 0.00 2.69
1701 4230 2.847234 ACCTCCGCCTTGGTGACA 60.847 61.111 1.22 0.00 39.52 3.58
1805 4334 4.865761 TGCCTATCCGCACGACGC 62.866 66.667 0.00 0.00 41.76 5.19
1935 4464 2.934570 GCACCGTTGACTCCCCGTA 61.935 63.158 0.00 0.00 0.00 4.02
2066 4595 4.472470 TCATCTTGACTTGATCCATCCAGT 59.528 41.667 0.00 0.00 35.72 4.00
2118 4647 3.941081 TCGAGAGATGGCCCAGAC 58.059 61.111 0.00 0.00 33.31 3.51
2135 4664 1.465689 CGACGGAATCGCTTTTTGCAT 60.466 47.619 0.00 0.00 45.52 3.96
2176 4705 1.154225 CGGAATTGGAACGCTGCAC 60.154 57.895 0.00 0.00 0.00 4.57
2206 4735 2.211250 TACCAACTACCTCTCGCACT 57.789 50.000 0.00 0.00 0.00 4.40
2211 4740 7.272978 TGCTAATTCAATACCAACTACCTCTC 58.727 38.462 0.00 0.00 0.00 3.20
2231 4760 7.087656 TGTAACGCACACGCATATTTGCTAA 62.088 40.000 6.57 0.00 45.53 3.09
2239 4768 3.771798 TCTATTGTAACGCACACGCATA 58.228 40.909 0.00 0.00 45.53 3.14
2285 4815 6.013379 TGGGACTTTAGCCATGTTTTATTGA 58.987 36.000 0.00 0.00 0.00 2.57
2318 4848 5.580691 CGTGGTGTTGACATACAAGATATGT 59.419 40.000 0.00 0.00 46.36 2.29
2326 4856 2.159085 TGTGACGTGGTGTTGACATACA 60.159 45.455 0.00 0.00 0.00 2.29
2327 4857 2.220133 GTGTGACGTGGTGTTGACATAC 59.780 50.000 0.00 0.00 0.00 2.39
2328 4858 2.475818 GTGTGACGTGGTGTTGACATA 58.524 47.619 0.00 0.00 0.00 2.29
2329 4859 1.295792 GTGTGACGTGGTGTTGACAT 58.704 50.000 0.00 0.00 0.00 3.06
2330 4860 0.741574 GGTGTGACGTGGTGTTGACA 60.742 55.000 0.00 0.00 0.00 3.58
2331 4861 1.758319 CGGTGTGACGTGGTGTTGAC 61.758 60.000 0.00 0.00 0.00 3.18
2332 4862 1.519676 CGGTGTGACGTGGTGTTGA 60.520 57.895 0.00 0.00 0.00 3.18
2333 4863 1.812093 ACGGTGTGACGTGGTGTTG 60.812 57.895 0.00 0.00 46.64 3.33
2334 4864 2.580276 ACGGTGTGACGTGGTGTT 59.420 55.556 0.00 0.00 46.64 3.32
2356 4886 3.646637 AGGGTCGGAAGGAGTATAAATGG 59.353 47.826 0.00 0.00 0.00 3.16
2382 4912 5.178797 AGGGTTTGAACACTCTCATTATCG 58.821 41.667 0.00 0.00 38.58 2.92
2391 4921 2.879026 GGTGAGAAGGGTTTGAACACTC 59.121 50.000 0.00 0.00 43.11 3.51
2436 4966 6.199376 TCCATGACTACCTACTGGACATTAA 58.801 40.000 0.00 0.00 37.04 1.40
2451 4981 0.826715 GTCTGGCTGCTCCATGACTA 59.173 55.000 0.00 0.00 45.50 2.59
2467 4997 2.917933 TGTTGTTGTTGCTAGCAGTCT 58.082 42.857 18.45 0.00 0.00 3.24
2499 5029 3.797353 ACCCATGGGCGTGCCTAG 61.797 66.667 31.73 3.80 39.32 3.02
2500 5030 4.108299 CACCCATGGGCGTGCCTA 62.108 66.667 31.73 4.86 39.32 3.93
2514 5044 2.811799 GTGGTTGTTGGGTGCACC 59.188 61.111 28.57 28.57 40.81 5.01
2515 5045 1.658686 TTCGTGGTTGTTGGGTGCAC 61.659 55.000 8.80 8.80 0.00 4.57
2516 5046 1.378646 TTCGTGGTTGTTGGGTGCA 60.379 52.632 0.00 0.00 0.00 4.57
2517 5047 1.065109 GTTCGTGGTTGTTGGGTGC 59.935 57.895 0.00 0.00 0.00 5.01
2518 5048 0.099791 GTGTTCGTGGTTGTTGGGTG 59.900 55.000 0.00 0.00 0.00 4.61
2519 5049 1.370587 CGTGTTCGTGGTTGTTGGGT 61.371 55.000 0.00 0.00 0.00 4.51
2520 5050 1.353804 CGTGTTCGTGGTTGTTGGG 59.646 57.895 0.00 0.00 0.00 4.12
2521 5051 1.298041 GCGTGTTCGTGGTTGTTGG 60.298 57.895 0.00 0.00 39.49 3.77
2522 5052 1.298041 GGCGTGTTCGTGGTTGTTG 60.298 57.895 0.00 0.00 39.49 3.33
2523 5053 2.815298 CGGCGTGTTCGTGGTTGTT 61.815 57.895 0.00 0.00 39.49 2.83
2524 5054 3.266376 CGGCGTGTTCGTGGTTGT 61.266 61.111 0.00 0.00 39.49 3.32
2525 5055 4.659874 GCGGCGTGTTCGTGGTTG 62.660 66.667 9.37 0.00 39.49 3.77
2545 5075 2.815647 CCTCTTGTCGGCCTTCGC 60.816 66.667 0.00 0.00 39.05 4.70
2546 5076 2.125512 CCCTCTTGTCGGCCTTCG 60.126 66.667 0.00 0.00 40.90 3.79
2547 5077 0.611714 TAACCCTCTTGTCGGCCTTC 59.388 55.000 0.00 0.00 0.00 3.46
2548 5078 0.323957 GTAACCCTCTTGTCGGCCTT 59.676 55.000 0.00 0.00 0.00 4.35
2549 5079 0.834687 TGTAACCCTCTTGTCGGCCT 60.835 55.000 0.00 0.00 0.00 5.19
2550 5080 0.672711 GTGTAACCCTCTTGTCGGCC 60.673 60.000 0.00 0.00 0.00 6.13
2551 5081 0.034337 TGTGTAACCCTCTTGTCGGC 59.966 55.000 0.00 0.00 34.36 5.54
2552 5082 2.762535 ATGTGTAACCCTCTTGTCGG 57.237 50.000 0.00 0.00 34.36 4.79
2553 5083 9.537192 TTATAATAATGTGTAACCCTCTTGTCG 57.463 33.333 0.00 0.00 34.36 4.35
2603 5133 8.806634 CGAATTCAAAAACAGATGACTGAAAAA 58.193 29.630 6.22 0.00 46.03 1.94
2604 5134 7.043458 GCGAATTCAAAAACAGATGACTGAAAA 60.043 33.333 6.22 0.00 46.03 2.29
2605 5135 6.417635 GCGAATTCAAAAACAGATGACTGAAA 59.582 34.615 6.22 0.00 46.03 2.69
2606 5136 5.914635 GCGAATTCAAAAACAGATGACTGAA 59.085 36.000 6.22 0.00 46.03 3.02
2607 5137 5.239306 AGCGAATTCAAAAACAGATGACTGA 59.761 36.000 6.22 0.00 46.03 3.41
2608 5138 6.087291 GAAGCGAATTCAAAAACAGATGACTG 59.913 38.462 6.22 0.00 42.28 3.51
2609 5139 5.695851 AGCGAATTCAAAAACAGATGACT 57.304 34.783 6.22 0.00 0.00 3.41
2610 5140 5.914635 TGAAGCGAATTCAAAAACAGATGAC 59.085 36.000 6.22 0.00 45.00 3.06
2611 5141 6.070897 TGAAGCGAATTCAAAAACAGATGA 57.929 33.333 6.22 0.00 45.00 2.92
2622 5152 2.448926 TTCGACCTGAAGCGAATTCA 57.551 45.000 6.22 3.82 45.79 2.57
2627 5157 2.223144 CACAAAATTCGACCTGAAGCGA 59.777 45.455 0.00 0.00 40.65 4.93
2628 5158 2.223144 TCACAAAATTCGACCTGAAGCG 59.777 45.455 0.00 0.00 40.65 4.68
2629 5159 3.555518 GTCACAAAATTCGACCTGAAGC 58.444 45.455 0.00 0.00 40.65 3.86
2630 5160 3.363970 CGGTCACAAAATTCGACCTGAAG 60.364 47.826 6.27 0.00 45.83 3.02
2631 5161 2.546368 CGGTCACAAAATTCGACCTGAA 59.454 45.455 6.27 0.00 45.83 3.02
2632 5162 2.139917 CGGTCACAAAATTCGACCTGA 58.860 47.619 6.27 0.00 45.83 3.86
2633 5163 1.871039 ACGGTCACAAAATTCGACCTG 59.129 47.619 6.27 3.01 45.83 4.00
2634 5164 2.140717 GACGGTCACAAAATTCGACCT 58.859 47.619 2.62 0.00 45.83 3.85
2635 5165 2.096417 CAGACGGTCACAAAATTCGACC 60.096 50.000 11.27 0.00 44.79 4.79
2636 5166 2.798283 TCAGACGGTCACAAAATTCGAC 59.202 45.455 11.27 0.00 0.00 4.20
2637 5167 3.100658 TCAGACGGTCACAAAATTCGA 57.899 42.857 11.27 0.00 0.00 3.71
2638 5168 4.394795 GAATCAGACGGTCACAAAATTCG 58.605 43.478 11.27 0.00 0.00 3.34
2639 5169 4.151689 TCGAATCAGACGGTCACAAAATTC 59.848 41.667 11.27 9.92 0.00 2.17
2640 5170 4.062293 TCGAATCAGACGGTCACAAAATT 58.938 39.130 11.27 2.56 0.00 1.82
2641 5171 3.432252 GTCGAATCAGACGGTCACAAAAT 59.568 43.478 11.27 0.00 0.00 1.82
2642 5172 2.798283 GTCGAATCAGACGGTCACAAAA 59.202 45.455 11.27 0.00 0.00 2.44
2643 5173 2.400399 GTCGAATCAGACGGTCACAAA 58.600 47.619 11.27 0.00 0.00 2.83
2644 5174 2.060326 GTCGAATCAGACGGTCACAA 57.940 50.000 11.27 0.00 0.00 3.33
2645 5175 3.786809 GTCGAATCAGACGGTCACA 57.213 52.632 11.27 0.00 0.00 3.58
2652 5182 0.029567 AGATCCGCGTCGAATCAGAC 59.970 55.000 4.92 0.00 37.76 3.51
2653 5183 0.308068 GAGATCCGCGTCGAATCAGA 59.692 55.000 4.92 0.00 0.00 3.27
2654 5184 0.029433 TGAGATCCGCGTCGAATCAG 59.971 55.000 4.92 0.00 0.00 2.90
2655 5185 0.029433 CTGAGATCCGCGTCGAATCA 59.971 55.000 4.92 4.61 0.00 2.57
2656 5186 1.272114 GCTGAGATCCGCGTCGAATC 61.272 60.000 4.92 2.60 0.00 2.52
2657 5187 1.299468 GCTGAGATCCGCGTCGAAT 60.299 57.895 4.92 0.00 0.00 3.34
2658 5188 2.102357 GCTGAGATCCGCGTCGAA 59.898 61.111 4.92 0.00 0.00 3.71
2659 5189 4.237809 CGCTGAGATCCGCGTCGA 62.238 66.667 4.92 0.00 44.01 4.20
2678 5208 2.017049 GAATAATTGAGGCACAGCGGT 58.983 47.619 0.00 0.00 0.00 5.68
2679 5209 2.292267 AGAATAATTGAGGCACAGCGG 58.708 47.619 0.00 0.00 0.00 5.52
2680 5210 5.446709 CATAAGAATAATTGAGGCACAGCG 58.553 41.667 0.00 0.00 0.00 5.18
2681 5211 5.218139 GCATAAGAATAATTGAGGCACAGC 58.782 41.667 0.00 0.00 0.00 4.40
2682 5212 5.278660 GGGCATAAGAATAATTGAGGCACAG 60.279 44.000 0.00 0.00 0.00 3.66
2683 5213 4.584325 GGGCATAAGAATAATTGAGGCACA 59.416 41.667 0.00 0.00 0.00 4.57
2684 5214 4.584325 TGGGCATAAGAATAATTGAGGCAC 59.416 41.667 0.00 0.00 0.00 5.01
2685 5215 4.802307 TGGGCATAAGAATAATTGAGGCA 58.198 39.130 0.00 0.00 0.00 4.75
2686 5216 5.244626 ACATGGGCATAAGAATAATTGAGGC 59.755 40.000 0.00 0.00 0.00 4.70
2687 5217 6.684686 CACATGGGCATAAGAATAATTGAGG 58.315 40.000 0.00 0.00 0.00 3.86
2688 5218 6.154445 GCACATGGGCATAAGAATAATTGAG 58.846 40.000 16.99 0.00 0.00 3.02
2689 5219 5.278414 CGCACATGGGCATAAGAATAATTGA 60.278 40.000 22.05 0.00 0.00 2.57
2690 5220 4.919168 CGCACATGGGCATAAGAATAATTG 59.081 41.667 22.05 0.00 0.00 2.32
2691 5221 4.584325 ACGCACATGGGCATAAGAATAATT 59.416 37.500 22.05 0.00 0.00 1.40
2692 5222 4.022935 CACGCACATGGGCATAAGAATAAT 60.023 41.667 22.05 0.00 0.00 1.28
2693 5223 3.314913 CACGCACATGGGCATAAGAATAA 59.685 43.478 22.05 0.00 0.00 1.40
2694 5224 2.877786 CACGCACATGGGCATAAGAATA 59.122 45.455 22.05 0.00 0.00 1.75
2695 5225 1.677576 CACGCACATGGGCATAAGAAT 59.322 47.619 22.05 0.00 0.00 2.40
2696 5226 1.093972 CACGCACATGGGCATAAGAA 58.906 50.000 22.05 0.00 0.00 2.52
2697 5227 0.035534 ACACGCACATGGGCATAAGA 60.036 50.000 22.05 0.00 0.00 2.10
2698 5228 0.810648 AACACGCACATGGGCATAAG 59.189 50.000 22.05 5.82 0.00 1.73
2699 5229 0.525311 CAACACGCACATGGGCATAA 59.475 50.000 22.05 0.00 0.00 1.90
2700 5230 1.311651 CCAACACGCACATGGGCATA 61.312 55.000 22.05 0.00 0.00 3.14
2701 5231 2.638354 CCAACACGCACATGGGCAT 61.638 57.895 22.05 0.00 0.00 4.40
2702 5232 3.293714 CCAACACGCACATGGGCA 61.294 61.111 22.05 0.00 0.00 5.36
2703 5233 4.054825 CCCAACACGCACATGGGC 62.055 66.667 10.81 10.81 46.77 5.36
2705 5235 2.476534 GAAGCCCAACACGCACATGG 62.477 60.000 0.00 0.00 0.00 3.66
2706 5236 1.081242 GAAGCCCAACACGCACATG 60.081 57.895 0.00 0.00 0.00 3.21
2707 5237 2.616330 CGAAGCCCAACACGCACAT 61.616 57.895 0.00 0.00 0.00 3.21
2708 5238 3.276091 CGAAGCCCAACACGCACA 61.276 61.111 0.00 0.00 0.00 4.57
2709 5239 2.711185 GAACGAAGCCCAACACGCAC 62.711 60.000 0.00 0.00 0.00 5.34
2710 5240 2.515057 AACGAAGCCCAACACGCA 60.515 55.556 0.00 0.00 0.00 5.24
2711 5241 2.251371 GAACGAAGCCCAACACGC 59.749 61.111 0.00 0.00 0.00 5.34
2712 5242 2.549282 CGAACGAAGCCCAACACG 59.451 61.111 0.00 0.00 0.00 4.49
2713 5243 2.613506 CCCGAACGAAGCCCAACAC 61.614 63.158 0.00 0.00 0.00 3.32
2714 5244 2.281208 CCCGAACGAAGCCCAACA 60.281 61.111 0.00 0.00 0.00 3.33
2715 5245 2.281276 ACCCGAACGAAGCCCAAC 60.281 61.111 0.00 0.00 0.00 3.77
2716 5246 2.031465 GACCCGAACGAAGCCCAA 59.969 61.111 0.00 0.00 0.00 4.12
2717 5247 4.367023 CGACCCGAACGAAGCCCA 62.367 66.667 0.00 0.00 0.00 5.36
2718 5248 4.060038 TCGACCCGAACGAAGCCC 62.060 66.667 0.00 0.00 36.84 5.19
2719 5249 2.808321 GTCGACCCGAACGAAGCC 60.808 66.667 3.51 0.00 41.31 4.35
2720 5250 3.170585 CGTCGACCCGAACGAAGC 61.171 66.667 10.58 0.00 41.31 3.86
2721 5251 2.503375 CCGTCGACCCGAACGAAG 60.503 66.667 10.58 0.00 41.31 3.79
2722 5252 4.705519 GCCGTCGACCCGAACGAA 62.706 66.667 10.58 0.00 41.31 3.85
2742 5272 2.439338 AACGCCAACTGTGCCACA 60.439 55.556 0.00 0.00 0.00 4.17
2743 5273 2.026014 CAACGCCAACTGTGCCAC 59.974 61.111 0.00 0.00 0.00 5.01
2744 5274 3.898509 GCAACGCCAACTGTGCCA 61.899 61.111 0.00 0.00 0.00 4.92
2745 5275 1.861542 TATGCAACGCCAACTGTGCC 61.862 55.000 0.00 0.00 0.00 5.01
2746 5276 0.454957 CTATGCAACGCCAACTGTGC 60.455 55.000 0.00 0.00 0.00 4.57
2747 5277 0.454957 GCTATGCAACGCCAACTGTG 60.455 55.000 0.00 0.00 0.00 3.66
2748 5278 1.875963 GCTATGCAACGCCAACTGT 59.124 52.632 0.00 0.00 0.00 3.55
2749 5279 1.226101 CGCTATGCAACGCCAACTG 60.226 57.895 0.00 0.00 0.00 3.16
2750 5280 2.398554 CCGCTATGCAACGCCAACT 61.399 57.895 0.00 0.00 0.00 3.16
2751 5281 2.100216 CCGCTATGCAACGCCAAC 59.900 61.111 0.00 0.00 0.00 3.77
2752 5282 2.046796 TCCGCTATGCAACGCCAA 60.047 55.556 0.00 0.00 0.00 4.52
2753 5283 2.511373 CTCCGCTATGCAACGCCA 60.511 61.111 0.00 0.00 0.00 5.69
2754 5284 3.941836 GCTCCGCTATGCAACGCC 61.942 66.667 0.00 0.00 0.00 5.68
2755 5285 3.160557 CTGCTCCGCTATGCAACGC 62.161 63.158 0.00 0.00 38.81 4.84
2756 5286 2.528743 CCTGCTCCGCTATGCAACG 61.529 63.158 0.00 0.00 38.81 4.10
2757 5287 1.450312 ACCTGCTCCGCTATGCAAC 60.450 57.895 0.00 0.00 38.81 4.17
2758 5288 1.450134 CACCTGCTCCGCTATGCAA 60.450 57.895 0.00 0.00 38.81 4.08
2759 5289 2.187685 CACCTGCTCCGCTATGCA 59.812 61.111 0.00 0.00 37.63 3.96
2760 5290 1.593750 CTCACCTGCTCCGCTATGC 60.594 63.158 0.00 0.00 0.00 3.14
2761 5291 1.068753 CCTCACCTGCTCCGCTATG 59.931 63.158 0.00 0.00 0.00 2.23
2762 5292 1.075970 TCCTCACCTGCTCCGCTAT 60.076 57.895 0.00 0.00 0.00 2.97
2763 5293 1.754621 CTCCTCACCTGCTCCGCTA 60.755 63.158 0.00 0.00 0.00 4.26
2764 5294 3.073735 CTCCTCACCTGCTCCGCT 61.074 66.667 0.00 0.00 0.00 5.52
2765 5295 3.071206 TCTCCTCACCTGCTCCGC 61.071 66.667 0.00 0.00 0.00 5.54
2766 5296 2.422231 CCTCTCCTCACCTGCTCCG 61.422 68.421 0.00 0.00 0.00 4.63
2767 5297 0.033011 TACCTCTCCTCACCTGCTCC 60.033 60.000 0.00 0.00 0.00 4.70
2768 5298 1.398692 CTACCTCTCCTCACCTGCTC 58.601 60.000 0.00 0.00 0.00 4.26
2769 5299 0.686112 GCTACCTCTCCTCACCTGCT 60.686 60.000 0.00 0.00 0.00 4.24
2770 5300 1.819905 GCTACCTCTCCTCACCTGC 59.180 63.158 0.00 0.00 0.00 4.85
2771 5301 2.010582 GCGCTACCTCTCCTCACCTG 62.011 65.000 0.00 0.00 0.00 4.00
2772 5302 1.755008 GCGCTACCTCTCCTCACCT 60.755 63.158 0.00 0.00 0.00 4.00
2773 5303 2.787567 GGCGCTACCTCTCCTCACC 61.788 68.421 7.64 0.00 34.51 4.02
2774 5304 2.809010 GGCGCTACCTCTCCTCAC 59.191 66.667 7.64 0.00 34.51 3.51
2775 5305 2.829003 CGGCGCTACCTCTCCTCA 60.829 66.667 7.64 0.00 35.61 3.86
2776 5306 2.829458 ACGGCGCTACCTCTCCTC 60.829 66.667 6.90 0.00 35.61 3.71
2777 5307 3.141488 CACGGCGCTACCTCTCCT 61.141 66.667 6.90 0.00 35.61 3.69
2778 5308 4.208686 CCACGGCGCTACCTCTCC 62.209 72.222 6.90 0.00 35.61 3.71
2779 5309 4.874977 GCCACGGCGCTACCTCTC 62.875 72.222 6.90 0.00 35.61 3.20
2795 5325 4.388499 TTCCTCCAACGCCTCCGC 62.388 66.667 0.00 0.00 38.22 5.54
2796 5326 2.125512 CTTCCTCCAACGCCTCCG 60.126 66.667 0.00 0.00 41.14 4.63
2797 5327 2.269241 CCTTCCTCCAACGCCTCC 59.731 66.667 0.00 0.00 0.00 4.30
2798 5328 2.436824 GCCTTCCTCCAACGCCTC 60.437 66.667 0.00 0.00 0.00 4.70
2799 5329 4.394712 CGCCTTCCTCCAACGCCT 62.395 66.667 0.00 0.00 0.00 5.52
2802 5332 2.515996 TTAGGCGCCTTCCTCCAACG 62.516 60.000 37.74 0.00 37.66 4.10
2803 5333 0.107165 ATTAGGCGCCTTCCTCCAAC 60.107 55.000 37.74 0.00 37.66 3.77
2804 5334 0.180406 GATTAGGCGCCTTCCTCCAA 59.820 55.000 37.74 22.39 37.66 3.53
2805 5335 1.830145 GATTAGGCGCCTTCCTCCA 59.170 57.895 37.74 13.33 37.66 3.86
2806 5336 1.301009 CGATTAGGCGCCTTCCTCC 60.301 63.158 37.74 17.96 37.66 4.30
2807 5337 4.345337 CGATTAGGCGCCTTCCTC 57.655 61.111 37.74 25.55 37.66 3.71
2816 5346 3.341835 GCTGCTCGGCGATTAGGC 61.342 66.667 11.27 11.34 42.76 3.93
2856 5386 4.452733 GGTTCCCTCCGTCCAGCG 62.453 72.222 0.00 0.00 40.95 5.18
2857 5387 2.593956 AAGGTTCCCTCCGTCCAGC 61.594 63.158 0.00 0.00 30.89 4.85
2858 5388 1.296715 CAAGGTTCCCTCCGTCCAG 59.703 63.158 0.00 0.00 30.89 3.86
2859 5389 2.890766 GCAAGGTTCCCTCCGTCCA 61.891 63.158 0.00 0.00 30.89 4.02
2860 5390 2.046217 GCAAGGTTCCCTCCGTCC 60.046 66.667 0.00 0.00 30.89 4.79
2861 5391 1.376037 CAGCAAGGTTCCCTCCGTC 60.376 63.158 0.00 0.00 30.89 4.79
2862 5392 2.750350 CAGCAAGGTTCCCTCCGT 59.250 61.111 0.00 0.00 30.89 4.69
2863 5393 2.747855 GCAGCAAGGTTCCCTCCG 60.748 66.667 0.00 0.00 30.89 4.63
2864 5394 2.747855 CGCAGCAAGGTTCCCTCC 60.748 66.667 0.00 0.00 30.89 4.30
2865 5395 2.747855 CCGCAGCAAGGTTCCCTC 60.748 66.667 0.00 0.00 30.89 4.30
2866 5396 4.351054 CCCGCAGCAAGGTTCCCT 62.351 66.667 0.00 0.00 33.87 4.20
2881 5411 4.096003 TTCCTACCGCTGCTGCCC 62.096 66.667 10.24 0.00 35.36 5.36
2882 5412 2.512515 CTTCCTACCGCTGCTGCC 60.513 66.667 10.24 0.00 35.36 4.85
2883 5413 2.512515 CCTTCCTACCGCTGCTGC 60.513 66.667 5.34 5.34 0.00 5.25
2884 5414 1.142748 CTCCTTCCTACCGCTGCTG 59.857 63.158 0.00 0.00 0.00 4.41
2885 5415 1.000486 TCTCCTTCCTACCGCTGCT 60.000 57.895 0.00 0.00 0.00 4.24
2886 5416 1.038130 TCTCTCCTTCCTACCGCTGC 61.038 60.000 0.00 0.00 0.00 5.25
2887 5417 0.741915 GTCTCTCCTTCCTACCGCTG 59.258 60.000 0.00 0.00 0.00 5.18
2888 5418 0.748729 CGTCTCTCCTTCCTACCGCT 60.749 60.000 0.00 0.00 0.00 5.52
2889 5419 0.747283 TCGTCTCTCCTTCCTACCGC 60.747 60.000 0.00 0.00 0.00 5.68
2890 5420 1.604755 CATCGTCTCTCCTTCCTACCG 59.395 57.143 0.00 0.00 0.00 4.02
2891 5421 1.957877 CCATCGTCTCTCCTTCCTACC 59.042 57.143 0.00 0.00 0.00 3.18
2892 5422 2.657143 ACCATCGTCTCTCCTTCCTAC 58.343 52.381 0.00 0.00 0.00 3.18
2893 5423 4.399219 CATACCATCGTCTCTCCTTCCTA 58.601 47.826 0.00 0.00 0.00 2.94
2894 5424 3.226777 CATACCATCGTCTCTCCTTCCT 58.773 50.000 0.00 0.00 0.00 3.36
2895 5425 2.297597 CCATACCATCGTCTCTCCTTCC 59.702 54.545 0.00 0.00 0.00 3.46
2896 5426 3.223435 TCCATACCATCGTCTCTCCTTC 58.777 50.000 0.00 0.00 0.00 3.46
2897 5427 3.314307 TCCATACCATCGTCTCTCCTT 57.686 47.619 0.00 0.00 0.00 3.36
2898 5428 3.534357 ATCCATACCATCGTCTCTCCT 57.466 47.619 0.00 0.00 0.00 3.69
2899 5429 3.306364 CCAATCCATACCATCGTCTCTCC 60.306 52.174 0.00 0.00 0.00 3.71
2900 5430 3.306364 CCCAATCCATACCATCGTCTCTC 60.306 52.174 0.00 0.00 0.00 3.20
2901 5431 2.634940 CCCAATCCATACCATCGTCTCT 59.365 50.000 0.00 0.00 0.00 3.10
2902 5432 2.289694 CCCCAATCCATACCATCGTCTC 60.290 54.545 0.00 0.00 0.00 3.36
2903 5433 1.699634 CCCCAATCCATACCATCGTCT 59.300 52.381 0.00 0.00 0.00 4.18
2904 5434 1.697432 TCCCCAATCCATACCATCGTC 59.303 52.381 0.00 0.00 0.00 4.20
2905 5435 1.814429 TCCCCAATCCATACCATCGT 58.186 50.000 0.00 0.00 0.00 3.73
2906 5436 2.305635 TGATCCCCAATCCATACCATCG 59.694 50.000 0.00 0.00 33.01 3.84
2907 5437 3.875369 GCTGATCCCCAATCCATACCATC 60.875 52.174 0.00 0.00 33.01 3.51
2908 5438 2.042162 GCTGATCCCCAATCCATACCAT 59.958 50.000 0.00 0.00 33.01 3.55
2909 5439 1.425066 GCTGATCCCCAATCCATACCA 59.575 52.381 0.00 0.00 33.01 3.25
2910 5440 1.611673 CGCTGATCCCCAATCCATACC 60.612 57.143 0.00 0.00 33.01 2.73
2911 5441 1.611673 CCGCTGATCCCCAATCCATAC 60.612 57.143 0.00 0.00 33.01 2.39
2912 5442 0.692476 CCGCTGATCCCCAATCCATA 59.308 55.000 0.00 0.00 33.01 2.74
2913 5443 1.061905 TCCGCTGATCCCCAATCCAT 61.062 55.000 0.00 0.00 33.01 3.41
2914 5444 1.278302 TTCCGCTGATCCCCAATCCA 61.278 55.000 0.00 0.00 33.01 3.41
2915 5445 0.819666 GTTCCGCTGATCCCCAATCC 60.820 60.000 0.00 0.00 33.01 3.01
2916 5446 0.181350 AGTTCCGCTGATCCCCAATC 59.819 55.000 0.00 0.00 34.72 2.67
2917 5447 0.181350 GAGTTCCGCTGATCCCCAAT 59.819 55.000 0.00 0.00 0.00 3.16
2918 5448 0.909610 AGAGTTCCGCTGATCCCCAA 60.910 55.000 0.00 0.00 0.00 4.12
2919 5449 0.032515 TAGAGTTCCGCTGATCCCCA 60.033 55.000 0.00 0.00 0.00 4.96
2920 5450 0.389757 GTAGAGTTCCGCTGATCCCC 59.610 60.000 0.00 0.00 0.00 4.81
2921 5451 0.389757 GGTAGAGTTCCGCTGATCCC 59.610 60.000 0.00 0.00 0.00 3.85
2922 5452 0.030908 CGGTAGAGTTCCGCTGATCC 59.969 60.000 0.00 0.00 41.48 3.36
2923 5453 1.022735 TCGGTAGAGTTCCGCTGATC 58.977 55.000 0.00 0.00 46.49 2.92
2924 5454 0.739561 GTCGGTAGAGTTCCGCTGAT 59.260 55.000 0.00 0.00 46.49 2.90
2925 5455 1.642037 CGTCGGTAGAGTTCCGCTGA 61.642 60.000 0.00 0.00 46.49 4.26
2926 5456 1.226323 CGTCGGTAGAGTTCCGCTG 60.226 63.158 0.00 0.00 46.49 5.18
2927 5457 2.404995 CCGTCGGTAGAGTTCCGCT 61.405 63.158 2.08 0.00 46.49 5.52
2928 5458 2.101770 CCGTCGGTAGAGTTCCGC 59.898 66.667 2.08 0.00 46.49 5.54
2930 5460 2.002509 GAGCCCGTCGGTAGAGTTCC 62.003 65.000 11.06 0.00 0.00 3.62
2931 5461 1.310933 TGAGCCCGTCGGTAGAGTTC 61.311 60.000 11.06 2.93 0.00 3.01
2932 5462 0.683504 ATGAGCCCGTCGGTAGAGTT 60.684 55.000 11.06 0.00 0.00 3.01
2933 5463 1.076923 ATGAGCCCGTCGGTAGAGT 60.077 57.895 11.06 0.00 0.00 3.24
2934 5464 1.101635 TGATGAGCCCGTCGGTAGAG 61.102 60.000 11.06 0.00 0.00 2.43
2935 5465 0.681887 TTGATGAGCCCGTCGGTAGA 60.682 55.000 11.06 0.00 0.00 2.59
2936 5466 0.527817 GTTGATGAGCCCGTCGGTAG 60.528 60.000 11.06 0.00 0.00 3.18
2937 5467 0.968901 AGTTGATGAGCCCGTCGGTA 60.969 55.000 11.06 0.00 0.00 4.02
2938 5468 2.264794 GTTGATGAGCCCGTCGGT 59.735 61.111 11.06 0.00 0.00 4.69
2939 5469 1.811266 CAGTTGATGAGCCCGTCGG 60.811 63.158 3.60 3.60 0.00 4.79
2940 5470 2.456119 GCAGTTGATGAGCCCGTCG 61.456 63.158 0.00 0.00 0.00 5.12
2941 5471 1.078848 AGCAGTTGATGAGCCCGTC 60.079 57.895 0.00 0.00 0.00 4.79
2942 5472 1.078848 GAGCAGTTGATGAGCCCGT 60.079 57.895 0.00 0.00 0.00 5.28
2943 5473 2.169789 CGAGCAGTTGATGAGCCCG 61.170 63.158 0.00 0.00 0.00 6.13
2944 5474 1.078848 ACGAGCAGTTGATGAGCCC 60.079 57.895 0.00 0.00 0.00 5.19
2945 5475 0.390340 TGACGAGCAGTTGATGAGCC 60.390 55.000 0.00 0.00 0.00 4.70
2946 5476 1.326852 CATGACGAGCAGTTGATGAGC 59.673 52.381 0.00 0.00 0.00 4.26
2947 5477 1.931841 CCATGACGAGCAGTTGATGAG 59.068 52.381 0.00 0.00 0.00 2.90
2948 5478 1.405933 CCCATGACGAGCAGTTGATGA 60.406 52.381 0.00 0.00 0.00 2.92
2949 5479 1.012086 CCCATGACGAGCAGTTGATG 58.988 55.000 0.00 0.00 0.00 3.07
2950 5480 0.107508 CCCCATGACGAGCAGTTGAT 60.108 55.000 0.00 0.00 0.00 2.57
2951 5481 1.296392 CCCCATGACGAGCAGTTGA 59.704 57.895 0.00 0.00 0.00 3.18
2952 5482 1.746615 CCCCCATGACGAGCAGTTG 60.747 63.158 0.00 0.00 0.00 3.16
2953 5483 2.671070 CCCCCATGACGAGCAGTT 59.329 61.111 0.00 0.00 0.00 3.16
2970 5500 4.120755 CAGGGGAGCTCAAGGGCC 62.121 72.222 17.19 6.74 0.00 5.80
2971 5501 4.811364 GCAGGGGAGCTCAAGGGC 62.811 72.222 17.19 9.88 0.00 5.19
2972 5502 3.013932 AGCAGGGGAGCTCAAGGG 61.014 66.667 17.19 3.14 42.18 3.95
2979 5509 4.486503 CAGGCTGAGCAGGGGAGC 62.487 72.222 9.42 0.00 0.00 4.70
2980 5510 4.486503 GCAGGCTGAGCAGGGGAG 62.487 72.222 20.86 0.00 0.00 4.30
2981 5511 3.623934 TAGCAGGCTGAGCAGGGGA 62.624 63.158 20.86 0.00 0.00 4.81
2982 5512 3.085947 TAGCAGGCTGAGCAGGGG 61.086 66.667 20.86 0.00 0.00 4.79
2983 5513 2.188994 GTAGCAGGCTGAGCAGGG 59.811 66.667 20.86 0.00 0.00 4.45
2984 5514 1.980784 ATGGTAGCAGGCTGAGCAGG 61.981 60.000 20.86 0.00 0.00 4.85
2985 5515 0.107312 AATGGTAGCAGGCTGAGCAG 60.107 55.000 20.86 0.00 0.00 4.24
2986 5516 0.329261 AAATGGTAGCAGGCTGAGCA 59.671 50.000 20.86 14.64 0.00 4.26
2987 5517 1.467920 AAAATGGTAGCAGGCTGAGC 58.532 50.000 20.86 8.66 0.00 4.26
3011 5541 4.163458 ACAAGTGAAGTGGAAGAACTACCA 59.837 41.667 0.00 0.00 0.00 3.25
3012 5542 4.704965 ACAAGTGAAGTGGAAGAACTACC 58.295 43.478 0.00 0.00 0.00 3.18
3013 5543 5.357257 TGACAAGTGAAGTGGAAGAACTAC 58.643 41.667 0.00 0.00 0.00 2.73
3014 5544 5.607939 TGACAAGTGAAGTGGAAGAACTA 57.392 39.130 0.00 0.00 0.00 2.24
3015 5545 4.487714 TGACAAGTGAAGTGGAAGAACT 57.512 40.909 0.00 0.00 0.00 3.01
3016 5546 5.296780 TGAATGACAAGTGAAGTGGAAGAAC 59.703 40.000 0.00 0.00 0.00 3.01
3017 5547 5.436175 TGAATGACAAGTGAAGTGGAAGAA 58.564 37.500 0.00 0.00 0.00 2.52
3018 5548 5.034852 TGAATGACAAGTGAAGTGGAAGA 57.965 39.130 0.00 0.00 0.00 2.87
3019 5549 4.320057 GCTGAATGACAAGTGAAGTGGAAG 60.320 45.833 0.00 0.00 0.00 3.46
3020 5550 3.565482 GCTGAATGACAAGTGAAGTGGAA 59.435 43.478 0.00 0.00 0.00 3.53
3021 5551 3.141398 GCTGAATGACAAGTGAAGTGGA 58.859 45.455 0.00 0.00 0.00 4.02
3022 5552 2.227388 GGCTGAATGACAAGTGAAGTGG 59.773 50.000 0.00 0.00 0.00 4.00
3023 5553 2.880268 TGGCTGAATGACAAGTGAAGTG 59.120 45.455 0.00 0.00 0.00 3.16
3024 5554 3.213206 TGGCTGAATGACAAGTGAAGT 57.787 42.857 0.00 0.00 0.00 3.01
3025 5555 4.778534 AATGGCTGAATGACAAGTGAAG 57.221 40.909 0.00 0.00 37.17 3.02
3026 5556 5.316167 AGTAATGGCTGAATGACAAGTGAA 58.684 37.500 0.00 0.00 37.17 3.18
3027 5557 4.910195 AGTAATGGCTGAATGACAAGTGA 58.090 39.130 0.00 0.00 37.17 3.41
3028 5558 5.633830 AAGTAATGGCTGAATGACAAGTG 57.366 39.130 0.00 0.00 37.17 3.16
3029 5559 7.611467 TGAATAAGTAATGGCTGAATGACAAGT 59.389 33.333 0.00 0.00 37.17 3.16
3030 5560 7.988737 TGAATAAGTAATGGCTGAATGACAAG 58.011 34.615 0.00 0.00 37.17 3.16
3031 5561 7.828717 TCTGAATAAGTAATGGCTGAATGACAA 59.171 33.333 0.00 0.00 37.17 3.18
3032 5562 7.337938 TCTGAATAAGTAATGGCTGAATGACA 58.662 34.615 0.00 0.00 38.56 3.58
3033 5563 7.792374 TCTGAATAAGTAATGGCTGAATGAC 57.208 36.000 0.00 0.00 0.00 3.06
3034 5564 8.985315 AATCTGAATAAGTAATGGCTGAATGA 57.015 30.769 0.00 0.00 0.00 2.57
3038 5568 8.397906 CGAAAAATCTGAATAAGTAATGGCTGA 58.602 33.333 0.00 0.00 0.00 4.26
3039 5569 8.184192 ACGAAAAATCTGAATAAGTAATGGCTG 58.816 33.333 0.00 0.00 0.00 4.85
3040 5570 8.281212 ACGAAAAATCTGAATAAGTAATGGCT 57.719 30.769 0.00 0.00 0.00 4.75
3041 5571 8.181573 TGACGAAAAATCTGAATAAGTAATGGC 58.818 33.333 0.00 0.00 0.00 4.40
3042 5572 9.708222 CTGACGAAAAATCTGAATAAGTAATGG 57.292 33.333 0.00 0.00 0.00 3.16
3080 5610 9.419297 CATGACTGAATGAAAAATGACAGAAAT 57.581 29.630 0.00 0.00 0.00 2.17
3081 5611 8.631797 TCATGACTGAATGAAAAATGACAGAAA 58.368 29.630 0.00 0.00 33.63 2.52
3082 5612 8.168790 TCATGACTGAATGAAAAATGACAGAA 57.831 30.769 0.00 0.00 33.63 3.02
3083 5613 7.574404 GCTCATGACTGAATGAAAAATGACAGA 60.574 37.037 0.00 0.00 36.16 3.41
3084 5614 6.527023 GCTCATGACTGAATGAAAAATGACAG 59.473 38.462 0.00 0.00 36.16 3.51
3085 5615 6.208007 AGCTCATGACTGAATGAAAAATGACA 59.792 34.615 0.00 0.00 36.16 3.58
3086 5616 6.618811 AGCTCATGACTGAATGAAAAATGAC 58.381 36.000 0.00 0.00 36.16 3.06
3087 5617 6.657966 AGAGCTCATGACTGAATGAAAAATGA 59.342 34.615 17.77 0.00 36.16 2.57
3088 5618 6.853720 AGAGCTCATGACTGAATGAAAAATG 58.146 36.000 17.77 0.00 36.16 2.32
3089 5619 7.176165 TGAAGAGCTCATGACTGAATGAAAAAT 59.824 33.333 17.77 0.00 36.16 1.82
3090 5620 6.487668 TGAAGAGCTCATGACTGAATGAAAAA 59.512 34.615 17.77 0.00 36.16 1.94
3091 5621 5.999600 TGAAGAGCTCATGACTGAATGAAAA 59.000 36.000 17.77 0.00 36.16 2.29
3092 5622 5.554070 TGAAGAGCTCATGACTGAATGAAA 58.446 37.500 17.77 0.00 36.16 2.69
3093 5623 5.156608 TGAAGAGCTCATGACTGAATGAA 57.843 39.130 17.77 0.00 36.16 2.57
3094 5624 4.222366 ACTGAAGAGCTCATGACTGAATGA 59.778 41.667 17.77 0.00 35.31 2.57
3095 5625 4.505808 ACTGAAGAGCTCATGACTGAATG 58.494 43.478 17.77 0.00 32.14 2.67
3096 5626 4.822685 ACTGAAGAGCTCATGACTGAAT 57.177 40.909 17.77 0.00 32.14 2.57
3097 5627 4.039609 TGAACTGAAGAGCTCATGACTGAA 59.960 41.667 17.77 0.00 32.14 3.02
3098 5628 3.575687 TGAACTGAAGAGCTCATGACTGA 59.424 43.478 17.77 0.00 32.14 3.41
3099 5629 3.922910 TGAACTGAAGAGCTCATGACTG 58.077 45.455 17.77 9.99 32.14 3.51
3100 5630 4.613925 TTGAACTGAAGAGCTCATGACT 57.386 40.909 17.77 0.00 32.14 3.41
3101 5631 5.876612 AATTGAACTGAAGAGCTCATGAC 57.123 39.130 17.77 4.59 32.14 3.06
3102 5632 6.936335 TGTTAATTGAACTGAAGAGCTCATGA 59.064 34.615 17.77 0.00 38.98 3.07
3103 5633 7.137490 TGTTAATTGAACTGAAGAGCTCATG 57.863 36.000 17.77 5.16 38.98 3.07
3104 5634 7.750229 TTGTTAATTGAACTGAAGAGCTCAT 57.250 32.000 17.77 2.97 38.98 2.90
3105 5635 7.750229 ATTGTTAATTGAACTGAAGAGCTCA 57.250 32.000 17.77 0.00 38.98 4.26
3106 5636 9.122613 GAAATTGTTAATTGAACTGAAGAGCTC 57.877 33.333 5.27 5.27 38.98 4.09
3107 5637 8.632679 TGAAATTGTTAATTGAACTGAAGAGCT 58.367 29.630 0.00 0.00 38.98 4.09
3108 5638 8.801715 TGAAATTGTTAATTGAACTGAAGAGC 57.198 30.769 0.00 0.00 38.98 4.09
3120 5650 9.927668 ACGGAAGATTCATTGAAATTGTTAATT 57.072 25.926 2.68 0.00 0.00 1.40
3121 5651 9.927668 AACGGAAGATTCATTGAAATTGTTAAT 57.072 25.926 2.68 0.00 0.00 1.40
3122 5652 9.757227 AAACGGAAGATTCATTGAAATTGTTAA 57.243 25.926 2.68 0.00 0.00 2.01
3124 5654 9.410556 CTAAACGGAAGATTCATTGAAATTGTT 57.589 29.630 2.68 1.63 0.00 2.83
3125 5655 8.576442 ACTAAACGGAAGATTCATTGAAATTGT 58.424 29.630 2.68 0.00 0.00 2.71
3126 5656 8.970691 ACTAAACGGAAGATTCATTGAAATTG 57.029 30.769 2.68 0.00 0.00 2.32
3127 5657 9.626045 GAACTAAACGGAAGATTCATTGAAATT 57.374 29.630 2.68 1.79 0.00 1.82
3128 5658 8.792633 TGAACTAAACGGAAGATTCATTGAAAT 58.207 29.630 2.68 0.00 0.00 2.17
3129 5659 8.160521 TGAACTAAACGGAAGATTCATTGAAA 57.839 30.769 2.68 0.00 0.00 2.69
3130 5660 7.444183 ACTGAACTAAACGGAAGATTCATTGAA 59.556 33.333 0.75 0.75 0.00 2.69
3131 5661 6.934645 ACTGAACTAAACGGAAGATTCATTGA 59.065 34.615 0.00 0.00 0.00 2.57
3132 5662 7.118390 AGACTGAACTAAACGGAAGATTCATTG 59.882 37.037 0.00 0.00 0.00 2.82
3133 5663 7.162082 AGACTGAACTAAACGGAAGATTCATT 58.838 34.615 0.00 0.00 0.00 2.57
3134 5664 6.702329 AGACTGAACTAAACGGAAGATTCAT 58.298 36.000 0.00 0.00 0.00 2.57
3135 5665 6.097915 AGACTGAACTAAACGGAAGATTCA 57.902 37.500 0.00 0.00 0.00 2.57
3136 5666 5.577554 GGAGACTGAACTAAACGGAAGATTC 59.422 44.000 0.00 0.00 0.00 2.52
3137 5667 5.011738 TGGAGACTGAACTAAACGGAAGATT 59.988 40.000 0.00 0.00 0.00 2.40
3138 5668 4.527038 TGGAGACTGAACTAAACGGAAGAT 59.473 41.667 0.00 0.00 0.00 2.40
3139 5669 3.893200 TGGAGACTGAACTAAACGGAAGA 59.107 43.478 0.00 0.00 0.00 2.87
3140 5670 4.238514 CTGGAGACTGAACTAAACGGAAG 58.761 47.826 0.00 0.00 0.00 3.46
3141 5671 3.640029 ACTGGAGACTGAACTAAACGGAA 59.360 43.478 0.00 0.00 0.00 4.30
3142 5672 3.228453 ACTGGAGACTGAACTAAACGGA 58.772 45.455 0.00 0.00 0.00 4.69
3143 5673 3.662247 ACTGGAGACTGAACTAAACGG 57.338 47.619 0.00 0.00 0.00 4.44
3144 5674 5.047847 TGAAACTGGAGACTGAACTAAACG 58.952 41.667 0.00 0.00 0.00 3.60
3145 5675 6.920569 TTGAAACTGGAGACTGAACTAAAC 57.079 37.500 0.00 0.00 0.00 2.01
3146 5676 7.279615 TGATTGAAACTGGAGACTGAACTAAA 58.720 34.615 0.00 0.00 0.00 1.85
3147 5677 6.826668 TGATTGAAACTGGAGACTGAACTAA 58.173 36.000 0.00 0.00 0.00 2.24
3148 5678 6.419484 TGATTGAAACTGGAGACTGAACTA 57.581 37.500 0.00 0.00 0.00 2.24
3149 5679 5.296151 TGATTGAAACTGGAGACTGAACT 57.704 39.130 0.00 0.00 0.00 3.01
3150 5680 7.856145 ATATGATTGAAACTGGAGACTGAAC 57.144 36.000 0.00 0.00 0.00 3.18
3151 5681 8.102676 TGAATATGATTGAAACTGGAGACTGAA 58.897 33.333 0.00 0.00 0.00 3.02
3152 5682 7.623630 TGAATATGATTGAAACTGGAGACTGA 58.376 34.615 0.00 0.00 0.00 3.41
3153 5683 7.551974 ACTGAATATGATTGAAACTGGAGACTG 59.448 37.037 0.00 0.00 0.00 3.51
3154 5684 7.628234 ACTGAATATGATTGAAACTGGAGACT 58.372 34.615 0.00 0.00 0.00 3.24
3155 5685 7.856145 ACTGAATATGATTGAAACTGGAGAC 57.144 36.000 0.00 0.00 0.00 3.36
3156 5686 9.958180 TTAACTGAATATGATTGAAACTGGAGA 57.042 29.630 0.00 0.00 0.00 3.71
3165 5695 9.045223 CCGAGTGATTTAACTGAATATGATTGA 57.955 33.333 0.00 0.00 0.00 2.57
3166 5696 8.830580 ACCGAGTGATTTAACTGAATATGATTG 58.169 33.333 0.00 0.00 0.00 2.67
3167 5697 8.964476 ACCGAGTGATTTAACTGAATATGATT 57.036 30.769 0.00 0.00 0.00 2.57
3168 5698 8.204160 TGACCGAGTGATTTAACTGAATATGAT 58.796 33.333 0.00 0.00 0.00 2.45
3169 5699 7.552459 TGACCGAGTGATTTAACTGAATATGA 58.448 34.615 0.00 0.00 0.00 2.15
3170 5700 7.770801 TGACCGAGTGATTTAACTGAATATG 57.229 36.000 0.00 0.00 0.00 1.78
3173 5703 8.964476 AATATGACCGAGTGATTTAACTGAAT 57.036 30.769 0.00 0.00 0.00 2.57
3174 5704 7.222031 CGAATATGACCGAGTGATTTAACTGAA 59.778 37.037 0.00 0.00 0.00 3.02
3175 5705 6.695713 CGAATATGACCGAGTGATTTAACTGA 59.304 38.462 0.00 0.00 0.00 3.41
3176 5706 6.074302 CCGAATATGACCGAGTGATTTAACTG 60.074 42.308 0.00 0.00 0.00 3.16
3177 5707 5.983720 CCGAATATGACCGAGTGATTTAACT 59.016 40.000 0.00 0.00 0.00 2.24
3178 5708 5.751990 ACCGAATATGACCGAGTGATTTAAC 59.248 40.000 0.00 0.00 0.00 2.01
3179 5709 5.909477 ACCGAATATGACCGAGTGATTTAA 58.091 37.500 0.00 0.00 0.00 1.52
3180 5710 5.524971 ACCGAATATGACCGAGTGATTTA 57.475 39.130 0.00 0.00 0.00 1.40
3181 5711 4.402056 ACCGAATATGACCGAGTGATTT 57.598 40.909 0.00 0.00 0.00 2.17
3182 5712 4.402056 AACCGAATATGACCGAGTGATT 57.598 40.909 0.00 0.00 0.00 2.57
3183 5713 4.099573 AGAAACCGAATATGACCGAGTGAT 59.900 41.667 0.00 0.00 0.00 3.06
3184 5714 3.446161 AGAAACCGAATATGACCGAGTGA 59.554 43.478 0.00 0.00 0.00 3.41
3185 5715 3.782046 AGAAACCGAATATGACCGAGTG 58.218 45.455 0.00 0.00 0.00 3.51
3186 5716 4.467198 AAGAAACCGAATATGACCGAGT 57.533 40.909 0.00 0.00 0.00 4.18
3187 5717 5.121768 ACAAAAGAAACCGAATATGACCGAG 59.878 40.000 0.00 0.00 0.00 4.63
3188 5718 4.998672 ACAAAAGAAACCGAATATGACCGA 59.001 37.500 0.00 0.00 0.00 4.69
3189 5719 5.291293 ACAAAAGAAACCGAATATGACCG 57.709 39.130 0.00 0.00 0.00 4.79
3190 5720 6.909909 AGAACAAAAGAAACCGAATATGACC 58.090 36.000 0.00 0.00 0.00 4.02
3191 5721 8.073768 TGAAGAACAAAAGAAACCGAATATGAC 58.926 33.333 0.00 0.00 0.00 3.06
3192 5722 8.160521 TGAAGAACAAAAGAAACCGAATATGA 57.839 30.769 0.00 0.00 0.00 2.15
3193 5723 8.076178 ACTGAAGAACAAAAGAAACCGAATATG 58.924 33.333 0.00 0.00 0.00 1.78
3194 5724 8.166422 ACTGAAGAACAAAAGAAACCGAATAT 57.834 30.769 0.00 0.00 0.00 1.28
3195 5725 7.562454 ACTGAAGAACAAAAGAAACCGAATA 57.438 32.000 0.00 0.00 0.00 1.75
3196 5726 6.451064 ACTGAAGAACAAAAGAAACCGAAT 57.549 33.333 0.00 0.00 0.00 3.34
3197 5727 5.890424 ACTGAAGAACAAAAGAAACCGAA 57.110 34.783 0.00 0.00 0.00 4.30
3198 5728 5.890424 AACTGAAGAACAAAAGAAACCGA 57.110 34.783 0.00 0.00 0.00 4.69
3199 5729 6.322491 AGAAACTGAAGAACAAAAGAAACCG 58.678 36.000 0.00 0.00 0.00 4.44
3200 5730 7.312899 TGAGAAACTGAAGAACAAAAGAAACC 58.687 34.615 0.00 0.00 0.00 3.27
3201 5731 8.742554 TTGAGAAACTGAAGAACAAAAGAAAC 57.257 30.769 0.00 0.00 0.00 2.78
3202 5732 9.927668 AATTGAGAAACTGAAGAACAAAAGAAA 57.072 25.926 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.