Multiple sequence alignment - TraesCS3B01G217500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G217500 chr3B 100.000 4282 0 0 1 4282 259913438 259909157 0.000000e+00 7908
1 TraesCS3B01G217500 chr3B 89.453 1043 57 30 2387 3393 12172832 12173857 0.000000e+00 1267
2 TraesCS3B01G217500 chr3B 89.825 570 30 11 2150 2696 365739232 365738668 0.000000e+00 706
3 TraesCS3B01G217500 chr3B 92.661 109 7 1 1879 1987 700365778 700365671 5.730000e-34 156
4 TraesCS3B01G217500 chr3D 98.182 1320 11 5 2111 3417 181655297 181653978 0.000000e+00 2292
5 TraesCS3B01G217500 chr3D 92.747 841 33 14 5 843 181658091 181657277 0.000000e+00 1190
6 TraesCS3B01G217500 chr3D 97.947 487 10 0 940 1426 181656748 181656262 0.000000e+00 845
7 TraesCS3B01G217500 chr3D 97.053 475 14 0 1423 1897 181656044 181655570 0.000000e+00 800
8 TraesCS3B01G217500 chr3D 92.923 325 16 6 2951 3274 327310535 327310853 2.330000e-127 466
9 TraesCS3B01G217500 chr3D 90.909 220 5 3 4077 4282 181653260 181653042 9.070000e-72 281
10 TraesCS3B01G217500 chr3D 98.639 147 2 0 3413 3559 181653421 181653275 1.180000e-65 261
11 TraesCS3B01G217500 chr3D 97.015 134 3 1 1979 2111 181655470 181655337 1.550000e-54 224
12 TraesCS3B01G217500 chr3D 90.000 120 8 4 1870 1985 219572152 219572271 7.420000e-33 152
13 TraesCS3B01G217500 chr3D 85.507 138 13 7 1868 1998 417470088 417469951 2.080000e-28 137
14 TraesCS3B01G217500 chr3A 91.835 1335 48 37 2111 3417 227365789 227367090 0.000000e+00 1805
15 TraesCS3B01G217500 chr3A 92.000 1100 63 18 794 1884 227364534 227365617 0.000000e+00 1520
16 TraesCS3B01G217500 chr3A 92.126 127 10 0 1985 2111 227365623 227365749 3.400000e-41 180
17 TraesCS3B01G217500 chr3A 76.991 339 40 17 3958 4282 227367390 227367704 4.430000e-35 159
18 TraesCS3B01G217500 chr3A 91.818 110 7 2 1880 1989 750351096 750350989 7.420000e-33 152
19 TraesCS3B01G217500 chr4B 88.490 1364 86 35 2111 3417 333372844 333374193 0.000000e+00 1583
20 TraesCS3B01G217500 chr4B 91.339 127 11 0 1985 2111 333372678 333372804 1.580000e-39 174
21 TraesCS3B01G217500 chr2B 88.813 876 44 23 2579 3417 380575173 380574315 0.000000e+00 1026
22 TraesCS3B01G217500 chr2B 91.445 339 27 1 3627 3963 721906433 721906095 8.390000e-127 464
23 TraesCS3B01G217500 chr2B 91.445 339 24 2 3627 3960 15708079 15707741 1.080000e-125 460
24 TraesCS3B01G217500 chr2B 91.150 339 25 2 3627 3960 15831309 15830971 5.050000e-124 455
25 TraesCS3B01G217500 chr2B 92.661 109 6 2 1888 1995 709839418 709839311 5.730000e-34 156
26 TraesCS3B01G217500 chr4A 91.897 580 33 9 2111 2682 610428080 610427507 0.000000e+00 798
27 TraesCS3B01G217500 chr4A 90.000 570 29 10 2150 2696 555158999 555159563 0.000000e+00 712
28 TraesCS3B01G217500 chr4A 91.445 339 23 3 3627 3960 270203267 270202930 1.080000e-125 460
29 TraesCS3B01G217500 chr4A 91.176 340 23 4 3627 3960 737082244 737082582 5.050000e-124 455
30 TraesCS3B01G217500 chr4A 91.385 325 22 5 2951 3274 306062223 306061904 1.410000e-119 440
31 TraesCS3B01G217500 chr4A 92.913 127 9 0 1985 2111 610428246 610428120 7.310000e-43 185
32 TraesCS3B01G217500 chr4A 95.506 89 4 0 1755 1843 610428367 610428279 4.460000e-30 143
33 TraesCS3B01G217500 chrUn 91.404 570 21 8 2150 2696 114953516 114954080 0.000000e+00 756
34 TraesCS3B01G217500 chr1A 89.180 610 35 10 2111 2696 37396996 37397598 0.000000e+00 732
35 TraesCS3B01G217500 chr1A 88.189 127 15 0 1985 2111 37396830 37396956 7.420000e-33 152
36 TraesCS3B01G217500 chr1A 90.265 113 11 0 1202 1314 498809557 498809669 9.590000e-32 148
37 TraesCS3B01G217500 chr1A 89.381 113 10 2 1203 1314 579762853 579762964 1.610000e-29 141
38 TraesCS3B01G217500 chr1B 92.735 468 22 8 2951 3417 77723719 77724175 0.000000e+00 665
39 TraesCS3B01G217500 chr1B 92.035 339 22 2 3627 3960 676955832 676956170 5.010000e-129 472
40 TraesCS3B01G217500 chr2A 92.961 412 28 1 311 721 277159871 277159460 2.200000e-167 599
41 TraesCS3B01G217500 chr2A 85.938 320 26 12 12 325 277161130 277160824 1.490000e-84 324
42 TraesCS3B01G217500 chr2A 92.063 126 10 0 1986 2111 132706495 132706620 1.220000e-40 178
43 TraesCS3B01G217500 chr5A 91.594 345 21 5 2387 2729 116202828 116203166 1.800000e-128 470
44 TraesCS3B01G217500 chr5B 91.420 338 24 2 3627 3959 454687170 454687507 3.900000e-125 459
45 TraesCS3B01G217500 chr5B 89.381 113 12 0 1202 1314 624163608 624163496 4.460000e-30 143
46 TraesCS3B01G217500 chr5B 89.381 113 12 0 1202 1314 627763539 627763427 4.460000e-30 143
47 TraesCS3B01G217500 chr7B 91.150 339 25 2 3627 3960 506597483 506597145 5.050000e-124 455
48 TraesCS3B01G217500 chr7B 91.692 325 21 5 2951 3274 699508185 699508504 3.040000e-121 446
49 TraesCS3B01G217500 chr7B 90.265 113 11 0 1202 1314 666503232 666503344 9.590000e-32 148
50 TraesCS3B01G217500 chr7A 90.882 340 25 3 3627 3960 184355105 184355444 6.530000e-123 451
51 TraesCS3B01G217500 chr6B 97.917 96 1 1 1886 1981 503547525 503547619 9.530000e-37 165
52 TraesCS3B01G217500 chr6B 85.926 135 13 6 1855 1986 553078128 553078259 5.770000e-29 139
53 TraesCS3B01G217500 chr1D 91.150 113 10 0 1202 1314 403563415 403563527 2.060000e-33 154
54 TraesCS3B01G217500 chr2D 86.207 145 13 7 1846 1987 100199348 100199208 2.670000e-32 150
55 TraesCS3B01G217500 chr2D 86.232 138 12 7 1868 1998 636827124 636826987 4.460000e-30 143
56 TraesCS3B01G217500 chr7D 90.265 113 11 0 1202 1314 591005360 591005472 9.590000e-32 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G217500 chr3B 259909157 259913438 4281 True 7908.000000 7908 100.000000 1 4282 1 chr3B.!!$R1 4281
1 TraesCS3B01G217500 chr3B 12172832 12173857 1025 False 1267.000000 1267 89.453000 2387 3393 1 chr3B.!!$F1 1006
2 TraesCS3B01G217500 chr3B 365738668 365739232 564 True 706.000000 706 89.825000 2150 2696 1 chr3B.!!$R2 546
3 TraesCS3B01G217500 chr3D 181653042 181658091 5049 True 841.857143 2292 96.070286 5 4282 7 chr3D.!!$R2 4277
4 TraesCS3B01G217500 chr3A 227364534 227367704 3170 False 916.000000 1805 88.238000 794 4282 4 chr3A.!!$F1 3488
5 TraesCS3B01G217500 chr4B 333372678 333374193 1515 False 878.500000 1583 89.914500 1985 3417 2 chr4B.!!$F1 1432
6 TraesCS3B01G217500 chr2B 380574315 380575173 858 True 1026.000000 1026 88.813000 2579 3417 1 chr2B.!!$R3 838
7 TraesCS3B01G217500 chr4A 555158999 555159563 564 False 712.000000 712 90.000000 2150 2696 1 chr4A.!!$F1 546
8 TraesCS3B01G217500 chr4A 610427507 610428367 860 True 375.333333 798 93.438667 1755 2682 3 chr4A.!!$R3 927
9 TraesCS3B01G217500 chrUn 114953516 114954080 564 False 756.000000 756 91.404000 2150 2696 1 chrUn.!!$F1 546
10 TraesCS3B01G217500 chr1A 37396830 37397598 768 False 442.000000 732 88.684500 1985 2696 2 chr1A.!!$F3 711
11 TraesCS3B01G217500 chr2A 277159460 277161130 1670 True 461.500000 599 89.449500 12 721 2 chr2A.!!$R1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
916 2355 0.179124 CCTAGCGCAACTGACTCCTC 60.179 60.000 11.47 0.0 0.00 3.71 F
938 2377 2.044352 TCGCAGACATCCCCGAGA 60.044 61.111 0.00 0.0 0.00 4.04 F
2512 4296 1.478510 ACCAAGCCAGTACTCTGATCG 59.521 52.381 0.00 0.0 43.76 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2512 4296 0.383231 GCATGTGCAATGGCTAGGAC 59.617 55.000 0.0 0.0 41.91 3.85 R
2744 4530 1.895798 TCAATCTCAGACTTGCGGAGT 59.104 47.619 0.0 0.0 42.70 3.85 R
3716 6181 0.107831 CGAAAACTGACCACCCTCCA 59.892 55.000 0.0 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.283101 GGCCTGCAATGTGGACCA 60.283 61.111 0.00 0.00 0.00 4.02
82 83 0.820226 TTCGACTCTGCTGCAGCTAT 59.180 50.000 36.61 20.40 42.66 2.97
95 96 0.676184 CAGCTATCCTAAGCCAGCGA 59.324 55.000 0.00 0.00 43.86 4.93
98 99 0.318762 CTATCCTAAGCCAGCGACCC 59.681 60.000 0.00 0.00 0.00 4.46
150 157 4.680237 CCGTCTTGGCCACGAGCA 62.680 66.667 13.05 0.00 46.50 4.26
184 191 3.740764 GCAACAATGACAAATGGTGGTGT 60.741 43.478 10.58 0.00 34.80 4.16
249 257 0.465097 CAAGAAGGCAGGCCGATGAT 60.465 55.000 4.37 0.00 41.95 2.45
456 1438 2.955402 GTCAGCTCGACCGTGACT 59.045 61.111 8.97 0.00 38.85 3.41
545 1528 2.031163 GGAGAAGTGCCACGCTGT 59.969 61.111 0.00 0.00 0.00 4.40
559 1542 3.120546 CCACGCTGTATTCAACTTGACTG 60.121 47.826 0.00 0.00 0.00 3.51
573 1556 3.137544 ACTTGACTGAACCCAACCATACA 59.862 43.478 0.00 0.00 0.00 2.29
661 1644 6.294508 GCCTAAAATCTGAGCAAAACCACTTA 60.295 38.462 0.00 0.00 0.00 2.24
668 1651 1.501604 AGCAAAACCACTTAAGGGGGA 59.498 47.619 27.47 0.00 0.00 4.81
671 1654 3.493699 GCAAAACCACTTAAGGGGGAAAC 60.494 47.826 27.47 9.27 0.00 2.78
701 1684 6.092748 CGGTTTTGATGATTTGAGGGTTAAG 58.907 40.000 0.00 0.00 0.00 1.85
721 1704 8.122952 GGTTAAGATCATACCAAATTCGACTTG 58.877 37.037 0.00 0.00 32.12 3.16
722 1705 8.665685 GTTAAGATCATACCAAATTCGACTTGT 58.334 33.333 0.00 0.00 0.00 3.16
723 1706 6.668541 AGATCATACCAAATTCGACTTGTG 57.331 37.500 0.00 0.00 0.00 3.33
724 1707 5.586243 AGATCATACCAAATTCGACTTGTGG 59.414 40.000 12.10 12.10 35.39 4.17
725 1708 4.647611 TCATACCAAATTCGACTTGTGGT 58.352 39.130 18.80 18.80 44.64 4.16
726 1709 4.454161 TCATACCAAATTCGACTTGTGGTG 59.546 41.667 21.46 12.47 42.51 4.17
727 1710 1.953686 ACCAAATTCGACTTGTGGTGG 59.046 47.619 16.06 10.43 41.05 4.61
728 1711 1.953686 CCAAATTCGACTTGTGGTGGT 59.046 47.619 5.87 0.00 0.00 4.16
729 1712 2.287547 CCAAATTCGACTTGTGGTGGTG 60.288 50.000 5.87 0.00 0.00 4.17
730 1713 1.604604 AATTCGACTTGTGGTGGTGG 58.395 50.000 0.00 0.00 0.00 4.61
731 1714 0.472471 ATTCGACTTGTGGTGGTGGT 59.528 50.000 0.00 0.00 0.00 4.16
732 1715 0.462937 TTCGACTTGTGGTGGTGGTG 60.463 55.000 0.00 0.00 0.00 4.17
733 1716 1.891919 CGACTTGTGGTGGTGGTGG 60.892 63.158 0.00 0.00 0.00 4.61
734 1717 1.226262 GACTTGTGGTGGTGGTGGT 59.774 57.895 0.00 0.00 0.00 4.16
735 1718 1.077068 ACTTGTGGTGGTGGTGGTG 60.077 57.895 0.00 0.00 0.00 4.17
736 1719 1.827789 CTTGTGGTGGTGGTGGTGG 60.828 63.158 0.00 0.00 0.00 4.61
737 1720 3.366406 TTGTGGTGGTGGTGGTGGG 62.366 63.158 0.00 0.00 0.00 4.61
738 1721 4.596585 GTGGTGGTGGTGGTGGGG 62.597 72.222 0.00 0.00 0.00 4.96
772 1755 1.815421 CTCCCTCGGACCGCATTTG 60.815 63.158 9.66 0.00 0.00 2.32
870 1853 2.255252 CGCCGAGCAAAACCCTTG 59.745 61.111 0.00 0.00 0.00 3.61
874 1857 2.931068 CGAGCAAAACCCTTGCCCC 61.931 63.158 5.87 0.00 45.98 5.80
875 1858 2.526624 AGCAAAACCCTTGCCCCC 60.527 61.111 5.87 0.00 45.98 5.40
916 2355 0.179124 CCTAGCGCAACTGACTCCTC 60.179 60.000 11.47 0.00 0.00 3.71
938 2377 2.044352 TCGCAGACATCCCCGAGA 60.044 61.111 0.00 0.00 0.00 4.04
948 2387 4.840005 CCCCGAGAAGAAGCCGCC 62.840 72.222 0.00 0.00 0.00 6.13
1418 2860 7.776933 TGCTAGTATTTGCTAGTTGAAGATG 57.223 36.000 4.89 0.00 40.29 2.90
1421 2863 6.674694 AGTATTTGCTAGTTGAAGATGCAG 57.325 37.500 0.00 0.00 35.02 4.41
1428 3091 6.585416 TGCTAGTTGAAGATGCAGAATATGA 58.415 36.000 0.00 0.00 0.00 2.15
1477 3140 2.199236 ACGTTCGAGTTTCTGTTGGTC 58.801 47.619 0.00 0.00 0.00 4.02
1766 3432 7.847096 TGATTACTTGGTAGCATTCTGTTCTA 58.153 34.615 0.00 0.00 0.00 2.10
1910 3576 7.658887 ATATATATATACTCCCTCCGTCCCA 57.341 40.000 4.54 0.00 0.00 4.37
1911 3577 4.901785 ATATATACTCCCTCCGTCCCAT 57.098 45.455 0.00 0.00 0.00 4.00
1914 3580 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
1915 3581 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
1916 3582 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
1917 3583 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
1918 3584 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
1919 3585 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
1920 3586 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
1921 3587 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
1922 3588 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
1923 3589 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
1924 3590 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
1926 3592 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
1928 3594 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
1929 3595 8.066000 CCGTCCCATAATATAAGAACGTTTTTC 58.934 37.037 7.42 0.00 0.00 2.29
1930 3596 8.605746 CGTCCCATAATATAAGAACGTTTTTCA 58.394 33.333 7.42 0.00 0.00 2.69
1944 3610 8.139989 AGAACGTTTTTCATACTACACTAGTGT 58.860 33.333 30.13 30.13 46.87 3.55
1945 3611 7.864307 ACGTTTTTCATACTACACTAGTGTC 57.136 36.000 31.11 11.71 43.74 3.67
1946 3612 7.428020 ACGTTTTTCATACTACACTAGTGTCA 58.572 34.615 31.11 17.88 43.74 3.58
1947 3613 7.922278 ACGTTTTTCATACTACACTAGTGTCAA 59.078 33.333 31.11 17.84 43.74 3.18
1948 3614 8.757789 CGTTTTTCATACTACACTAGTGTCAAA 58.242 33.333 31.11 17.49 43.74 2.69
1952 3618 7.862741 TCATACTACACTAGTGTCAAAAACG 57.137 36.000 31.11 14.84 43.74 3.60
1953 3619 7.428020 TCATACTACACTAGTGTCAAAAACGT 58.572 34.615 31.11 18.06 43.74 3.99
1954 3620 7.922278 TCATACTACACTAGTGTCAAAAACGTT 59.078 33.333 31.11 6.17 43.74 3.99
1956 3622 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
1957 3623 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
1958 3624 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
1959 3625 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
1960 3626 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
1961 3627 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
1968 3634 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
1969 3635 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
2290 4021 3.806316 AGGCGTTGAAAACTGATTACG 57.194 42.857 0.00 0.00 46.99 3.18
2512 4296 1.478510 ACCAAGCCAGTACTCTGATCG 59.521 52.381 0.00 0.00 43.76 3.69
2744 4530 0.476338 TTGCTAACAACTGCCCTCCA 59.524 50.000 0.00 0.00 0.00 3.86
3204 5028 8.612619 CATACTTTGATATACAACAACTGGGTC 58.387 37.037 0.00 0.00 38.29 4.46
3289 5113 1.866853 GCTGGCCAGTAAACCTGTGC 61.867 60.000 32.81 12.57 39.74 4.57
3370 5194 3.149196 TGCTGGACTTGATTTGGTCTTC 58.851 45.455 0.00 0.00 33.46 2.87
3464 5929 3.168193 CCCACGTTTGATATTTTGCGTC 58.832 45.455 0.00 0.00 0.00 5.19
3559 6024 1.821216 AAATGGGCTCTGTACAACGG 58.179 50.000 0.00 0.00 0.00 4.44
3560 6025 0.690762 AATGGGCTCTGTACAACGGT 59.309 50.000 0.00 0.00 0.00 4.83
3561 6026 0.249398 ATGGGCTCTGTACAACGGTC 59.751 55.000 0.00 0.00 0.00 4.79
3563 6028 1.079336 GGCTCTGTACAACGGTCCC 60.079 63.158 0.00 0.00 0.00 4.46
3564 6029 1.079336 GCTCTGTACAACGGTCCCC 60.079 63.158 0.00 0.00 0.00 4.81
3565 6030 1.542187 GCTCTGTACAACGGTCCCCT 61.542 60.000 0.00 0.00 0.00 4.79
3568 6033 1.071071 TCTGTACAACGGTCCCCTTTG 59.929 52.381 0.00 0.00 38.49 2.77
3569 6034 0.838608 TGTACAACGGTCCCCTTTGT 59.161 50.000 9.66 9.66 45.64 2.83
3571 6036 1.605232 GTACAACGGTCCCCTTTGTTG 59.395 52.381 9.96 6.89 42.09 3.33
3572 6037 0.256464 ACAACGGTCCCCTTTGTTGA 59.744 50.000 12.03 0.00 42.09 3.18
3573 6038 1.133606 ACAACGGTCCCCTTTGTTGAT 60.134 47.619 12.03 0.00 42.09 2.57
3574 6039 1.269448 CAACGGTCCCCTTTGTTGATG 59.731 52.381 1.47 0.00 43.26 3.07
3575 6040 0.768622 ACGGTCCCCTTTGTTGATGA 59.231 50.000 0.00 0.00 0.00 2.92
3576 6041 1.165270 CGGTCCCCTTTGTTGATGAC 58.835 55.000 0.00 0.00 0.00 3.06
3577 6042 1.544537 CGGTCCCCTTTGTTGATGACA 60.545 52.381 0.00 0.00 36.19 3.58
3578 6043 2.593026 GGTCCCCTTTGTTGATGACAA 58.407 47.619 0.00 0.00 46.19 3.18
3588 6053 3.413687 GTTGATGACAACGACACGTAC 57.586 47.619 0.00 0.00 45.06 3.67
3589 6054 1.677208 TGATGACAACGACACGTACG 58.323 50.000 15.01 15.01 39.99 3.67
3590 6055 1.002576 TGATGACAACGACACGTACGT 60.003 47.619 16.72 16.72 45.89 3.57
3612 6077 3.467374 TTTTTGACAAATGGGTGGCTC 57.533 42.857 0.50 0.00 0.00 4.70
3613 6078 2.079170 TTTGACAAATGGGTGGCTCA 57.921 45.000 0.00 0.00 0.00 4.26
3614 6079 2.079170 TTGACAAATGGGTGGCTCAA 57.921 45.000 0.00 0.00 0.00 3.02
3615 6080 1.619654 TGACAAATGGGTGGCTCAAG 58.380 50.000 0.00 0.00 0.00 3.02
3616 6081 1.144708 TGACAAATGGGTGGCTCAAGA 59.855 47.619 0.00 0.00 0.00 3.02
3617 6082 1.815003 GACAAATGGGTGGCTCAAGAG 59.185 52.381 0.00 0.00 0.00 2.85
3618 6083 1.145738 ACAAATGGGTGGCTCAAGAGT 59.854 47.619 0.00 0.00 0.00 3.24
3619 6084 1.815003 CAAATGGGTGGCTCAAGAGTC 59.185 52.381 0.00 0.00 0.00 3.36
3620 6085 1.067295 AATGGGTGGCTCAAGAGTCA 58.933 50.000 0.00 0.00 41.34 3.41
3621 6086 1.067295 ATGGGTGGCTCAAGAGTCAA 58.933 50.000 5.87 0.00 45.57 3.18
3626 6091 1.728971 GTGGCTCAAGAGTCAACATCG 59.271 52.381 5.87 0.00 45.57 3.84
3627 6092 1.618343 TGGCTCAAGAGTCAACATCGA 59.382 47.619 1.19 0.00 40.54 3.59
3628 6093 1.996191 GGCTCAAGAGTCAACATCGAC 59.004 52.381 0.00 0.00 36.08 4.20
3629 6094 1.996191 GCTCAAGAGTCAACATCGACC 59.004 52.381 0.00 0.00 36.52 4.79
3630 6095 2.353208 GCTCAAGAGTCAACATCGACCT 60.353 50.000 0.00 0.00 36.52 3.85
3631 6096 3.862642 GCTCAAGAGTCAACATCGACCTT 60.863 47.826 0.00 0.00 36.52 3.50
3632 6097 3.653344 TCAAGAGTCAACATCGACCTTG 58.347 45.455 12.30 12.30 41.07 3.61
3633 6098 2.086054 AGAGTCAACATCGACCTTGC 57.914 50.000 0.00 0.00 36.52 4.01
3634 6099 1.344438 AGAGTCAACATCGACCTTGCA 59.656 47.619 0.00 0.00 36.52 4.08
3635 6100 2.143122 GAGTCAACATCGACCTTGCAA 58.857 47.619 0.00 0.00 36.52 4.08
3636 6101 2.548057 GAGTCAACATCGACCTTGCAAA 59.452 45.455 0.00 0.00 36.52 3.68
3637 6102 2.549754 AGTCAACATCGACCTTGCAAAG 59.450 45.455 0.00 0.00 45.69 2.77
3638 6103 3.744214 AGTCAACATCGACCTTGCAAAGA 60.744 43.478 1.09 0.00 45.77 2.52
3639 6104 5.221380 AGTCAACATCGACCTTGCAAAGAA 61.221 41.667 1.09 0.00 45.77 2.52
3640 6105 6.988592 AGTCAACATCGACCTTGCAAAGAAG 61.989 44.000 1.09 0.00 45.77 2.85
3652 6117 4.771590 TGCAAAGAAGATGCCAAGTAAG 57.228 40.909 0.00 0.00 43.16 2.34
3653 6118 3.507233 TGCAAAGAAGATGCCAAGTAAGG 59.493 43.478 0.00 0.00 43.16 2.69
3654 6119 3.758554 GCAAAGAAGATGCCAAGTAAGGA 59.241 43.478 0.00 0.00 37.85 3.36
3655 6120 4.142513 GCAAAGAAGATGCCAAGTAAGGAG 60.143 45.833 0.00 0.00 37.85 3.69
3656 6121 5.248640 CAAAGAAGATGCCAAGTAAGGAGA 58.751 41.667 0.00 0.00 0.00 3.71
3657 6122 5.505181 AAGAAGATGCCAAGTAAGGAGAA 57.495 39.130 0.00 0.00 0.00 2.87
3658 6123 5.505181 AGAAGATGCCAAGTAAGGAGAAA 57.495 39.130 0.00 0.00 0.00 2.52
3659 6124 5.249420 AGAAGATGCCAAGTAAGGAGAAAC 58.751 41.667 0.00 0.00 0.00 2.78
3660 6125 3.956744 AGATGCCAAGTAAGGAGAAACC 58.043 45.455 0.00 0.00 39.35 3.27
3661 6126 2.178912 TGCCAAGTAAGGAGAAACCG 57.821 50.000 0.00 0.00 44.74 4.44
3662 6127 1.695242 TGCCAAGTAAGGAGAAACCGA 59.305 47.619 0.00 0.00 44.74 4.69
3663 6128 2.105134 TGCCAAGTAAGGAGAAACCGAA 59.895 45.455 0.00 0.00 44.74 4.30
3664 6129 2.742589 GCCAAGTAAGGAGAAACCGAAG 59.257 50.000 0.00 0.00 44.74 3.79
3665 6130 3.556423 GCCAAGTAAGGAGAAACCGAAGA 60.556 47.826 0.00 0.00 44.74 2.87
3666 6131 4.638304 CCAAGTAAGGAGAAACCGAAGAA 58.362 43.478 0.00 0.00 44.74 2.52
3667 6132 4.691216 CCAAGTAAGGAGAAACCGAAGAAG 59.309 45.833 0.00 0.00 44.74 2.85
3668 6133 5.298347 CAAGTAAGGAGAAACCGAAGAAGT 58.702 41.667 0.00 0.00 44.74 3.01
3669 6134 6.453092 CAAGTAAGGAGAAACCGAAGAAGTA 58.547 40.000 0.00 0.00 44.74 2.24
3670 6135 6.270156 AGTAAGGAGAAACCGAAGAAGTAG 57.730 41.667 0.00 0.00 44.74 2.57
3671 6136 6.008960 AGTAAGGAGAAACCGAAGAAGTAGA 58.991 40.000 0.00 0.00 44.74 2.59
3672 6137 5.803237 AAGGAGAAACCGAAGAAGTAGAA 57.197 39.130 0.00 0.00 44.74 2.10
3673 6138 5.803237 AGGAGAAACCGAAGAAGTAGAAA 57.197 39.130 0.00 0.00 44.74 2.52
3674 6139 6.170846 AGGAGAAACCGAAGAAGTAGAAAA 57.829 37.500 0.00 0.00 44.74 2.29
3675 6140 6.589135 AGGAGAAACCGAAGAAGTAGAAAAA 58.411 36.000 0.00 0.00 44.74 1.94
3676 6141 6.482641 AGGAGAAACCGAAGAAGTAGAAAAAC 59.517 38.462 0.00 0.00 44.74 2.43
3677 6142 6.259387 GGAGAAACCGAAGAAGTAGAAAAACA 59.741 38.462 0.00 0.00 0.00 2.83
3678 6143 7.201670 GGAGAAACCGAAGAAGTAGAAAAACAA 60.202 37.037 0.00 0.00 0.00 2.83
3679 6144 7.694886 AGAAACCGAAGAAGTAGAAAAACAAG 58.305 34.615 0.00 0.00 0.00 3.16
3680 6145 6.997239 AACCGAAGAAGTAGAAAAACAAGT 57.003 33.333 0.00 0.00 0.00 3.16
3681 6146 6.359480 ACCGAAGAAGTAGAAAAACAAGTG 57.641 37.500 0.00 0.00 0.00 3.16
3682 6147 5.878669 ACCGAAGAAGTAGAAAAACAAGTGT 59.121 36.000 0.00 0.00 0.00 3.55
3683 6148 6.183360 ACCGAAGAAGTAGAAAAACAAGTGTG 60.183 38.462 0.00 0.00 0.00 3.82
3684 6149 6.192360 CGAAGAAGTAGAAAAACAAGTGTGG 58.808 40.000 0.00 0.00 0.00 4.17
3685 6150 5.500645 AGAAGTAGAAAAACAAGTGTGGC 57.499 39.130 0.00 0.00 0.00 5.01
3686 6151 4.947388 AGAAGTAGAAAAACAAGTGTGGCA 59.053 37.500 0.00 0.00 0.00 4.92
3687 6152 4.632538 AGTAGAAAAACAAGTGTGGCAC 57.367 40.909 11.55 11.55 34.10 5.01
3688 6153 2.959507 AGAAAAACAAGTGTGGCACC 57.040 45.000 16.26 6.59 34.49 5.01
3689 6154 2.175202 AGAAAAACAAGTGTGGCACCA 58.825 42.857 16.26 0.00 34.49 4.17
3690 6155 2.765699 AGAAAAACAAGTGTGGCACCAT 59.234 40.909 16.26 0.00 34.49 3.55
3691 6156 3.197549 AGAAAAACAAGTGTGGCACCATT 59.802 39.130 16.26 6.89 34.49 3.16
3692 6157 2.888834 AAACAAGTGTGGCACCATTC 57.111 45.000 16.26 3.25 34.49 2.67
3693 6158 0.667993 AACAAGTGTGGCACCATTCG 59.332 50.000 16.26 2.41 34.49 3.34
3694 6159 0.179032 ACAAGTGTGGCACCATTCGA 60.179 50.000 16.26 0.00 34.49 3.71
3695 6160 0.950836 CAAGTGTGGCACCATTCGAA 59.049 50.000 16.26 0.00 34.49 3.71
3696 6161 1.336440 CAAGTGTGGCACCATTCGAAA 59.664 47.619 16.26 0.00 34.49 3.46
3697 6162 1.238439 AGTGTGGCACCATTCGAAAG 58.762 50.000 16.26 0.00 34.49 2.62
3698 6163 1.202758 AGTGTGGCACCATTCGAAAGA 60.203 47.619 16.26 0.00 34.49 2.52
3699 6164 1.812571 GTGTGGCACCATTCGAAAGAT 59.187 47.619 16.26 0.00 41.60 2.40
3700 6165 1.811965 TGTGGCACCATTCGAAAGATG 59.188 47.619 16.26 0.00 41.60 2.90
3701 6166 1.812571 GTGGCACCATTCGAAAGATGT 59.187 47.619 6.29 0.00 41.60 3.06
3702 6167 2.083774 TGGCACCATTCGAAAGATGTC 58.916 47.619 0.00 0.00 41.60 3.06
3703 6168 2.290260 TGGCACCATTCGAAAGATGTCT 60.290 45.455 0.00 0.00 41.60 3.41
3704 6169 2.096496 GGCACCATTCGAAAGATGTCTG 59.904 50.000 0.00 0.00 41.60 3.51
3705 6170 2.744202 GCACCATTCGAAAGATGTCTGT 59.256 45.455 0.00 0.00 41.60 3.41
3706 6171 3.425359 GCACCATTCGAAAGATGTCTGTG 60.425 47.826 0.00 1.45 41.60 3.66
3707 6172 3.125829 CACCATTCGAAAGATGTCTGTGG 59.874 47.826 0.00 4.41 41.60 4.17
3708 6173 3.244561 ACCATTCGAAAGATGTCTGTGGT 60.245 43.478 0.00 5.12 41.60 4.16
3709 6174 3.753272 CCATTCGAAAGATGTCTGTGGTT 59.247 43.478 0.00 0.00 41.60 3.67
3710 6175 4.216257 CCATTCGAAAGATGTCTGTGGTTT 59.784 41.667 0.00 0.00 41.60 3.27
3711 6176 5.385617 CATTCGAAAGATGTCTGTGGTTTC 58.614 41.667 0.00 0.00 41.60 2.78
3712 6177 4.066646 TCGAAAGATGTCTGTGGTTTCA 57.933 40.909 0.00 0.00 33.31 2.69
3713 6178 4.641396 TCGAAAGATGTCTGTGGTTTCAT 58.359 39.130 0.00 0.00 33.31 2.57
3714 6179 4.452114 TCGAAAGATGTCTGTGGTTTCATG 59.548 41.667 0.00 0.00 33.31 3.07
3715 6180 4.452114 CGAAAGATGTCTGTGGTTTCATGA 59.548 41.667 0.00 0.00 0.00 3.07
3716 6181 5.122869 CGAAAGATGTCTGTGGTTTCATGAT 59.877 40.000 0.00 0.00 0.00 2.45
3717 6182 5.892160 AAGATGTCTGTGGTTTCATGATG 57.108 39.130 0.00 0.00 0.00 3.07
3718 6183 4.267536 AGATGTCTGTGGTTTCATGATGG 58.732 43.478 0.00 0.00 0.00 3.51
3719 6184 3.786368 TGTCTGTGGTTTCATGATGGA 57.214 42.857 0.00 0.00 0.00 3.41
3720 6185 3.678289 TGTCTGTGGTTTCATGATGGAG 58.322 45.455 0.00 0.00 0.00 3.86
3721 6186 3.012518 GTCTGTGGTTTCATGATGGAGG 58.987 50.000 0.00 0.00 0.00 4.30
3722 6187 2.025981 TCTGTGGTTTCATGATGGAGGG 60.026 50.000 0.00 0.00 0.00 4.30
3723 6188 1.710244 TGTGGTTTCATGATGGAGGGT 59.290 47.619 0.00 0.00 0.00 4.34
3724 6189 2.094675 GTGGTTTCATGATGGAGGGTG 58.905 52.381 0.00 0.00 0.00 4.61
3725 6190 1.005805 TGGTTTCATGATGGAGGGTGG 59.994 52.381 0.00 0.00 0.00 4.61
3726 6191 1.005924 GGTTTCATGATGGAGGGTGGT 59.994 52.381 0.00 0.00 0.00 4.16
3727 6192 2.369394 GTTTCATGATGGAGGGTGGTC 58.631 52.381 0.00 0.00 0.00 4.02
3728 6193 1.667595 TTCATGATGGAGGGTGGTCA 58.332 50.000 0.00 0.00 0.00 4.02
3729 6194 1.206878 TCATGATGGAGGGTGGTCAG 58.793 55.000 0.00 0.00 0.00 3.51
3730 6195 0.914644 CATGATGGAGGGTGGTCAGT 59.085 55.000 0.00 0.00 0.00 3.41
3731 6196 1.283029 CATGATGGAGGGTGGTCAGTT 59.717 52.381 0.00 0.00 0.00 3.16
3732 6197 1.444933 TGATGGAGGGTGGTCAGTTT 58.555 50.000 0.00 0.00 0.00 2.66
3733 6198 1.780309 TGATGGAGGGTGGTCAGTTTT 59.220 47.619 0.00 0.00 0.00 2.43
3734 6199 2.224769 TGATGGAGGGTGGTCAGTTTTC 60.225 50.000 0.00 0.00 0.00 2.29
3735 6200 0.107831 TGGAGGGTGGTCAGTTTTCG 59.892 55.000 0.00 0.00 0.00 3.46
3736 6201 0.108019 GGAGGGTGGTCAGTTTTCGT 59.892 55.000 0.00 0.00 0.00 3.85
3737 6202 1.476291 GGAGGGTGGTCAGTTTTCGTT 60.476 52.381 0.00 0.00 0.00 3.85
3738 6203 2.224354 GGAGGGTGGTCAGTTTTCGTTA 60.224 50.000 0.00 0.00 0.00 3.18
3739 6204 3.064931 GAGGGTGGTCAGTTTTCGTTAG 58.935 50.000 0.00 0.00 0.00 2.34
3740 6205 2.436911 AGGGTGGTCAGTTTTCGTTAGT 59.563 45.455 0.00 0.00 0.00 2.24
3741 6206 2.546789 GGGTGGTCAGTTTTCGTTAGTG 59.453 50.000 0.00 0.00 0.00 2.74
3742 6207 3.200483 GGTGGTCAGTTTTCGTTAGTGT 58.800 45.455 0.00 0.00 0.00 3.55
3743 6208 3.001939 GGTGGTCAGTTTTCGTTAGTGTG 59.998 47.826 0.00 0.00 0.00 3.82
3744 6209 2.610374 TGGTCAGTTTTCGTTAGTGTGC 59.390 45.455 0.00 0.00 0.00 4.57
3745 6210 2.870411 GGTCAGTTTTCGTTAGTGTGCT 59.130 45.455 0.00 0.00 0.00 4.40
3746 6211 3.311596 GGTCAGTTTTCGTTAGTGTGCTT 59.688 43.478 0.00 0.00 0.00 3.91
3747 6212 4.271687 GTCAGTTTTCGTTAGTGTGCTTG 58.728 43.478 0.00 0.00 0.00 4.01
3748 6213 3.936453 TCAGTTTTCGTTAGTGTGCTTGT 59.064 39.130 0.00 0.00 0.00 3.16
3749 6214 4.393680 TCAGTTTTCGTTAGTGTGCTTGTT 59.606 37.500 0.00 0.00 0.00 2.83
3750 6215 5.581479 TCAGTTTTCGTTAGTGTGCTTGTTA 59.419 36.000 0.00 0.00 0.00 2.41
3751 6216 5.901884 CAGTTTTCGTTAGTGTGCTTGTTAG 59.098 40.000 0.00 0.00 0.00 2.34
3752 6217 5.007332 AGTTTTCGTTAGTGTGCTTGTTAGG 59.993 40.000 0.00 0.00 0.00 2.69
3753 6218 4.325028 TTCGTTAGTGTGCTTGTTAGGA 57.675 40.909 0.00 0.00 0.00 2.94
3754 6219 3.909430 TCGTTAGTGTGCTTGTTAGGAG 58.091 45.455 0.00 0.00 0.00 3.69
3755 6220 3.319972 TCGTTAGTGTGCTTGTTAGGAGT 59.680 43.478 0.00 0.00 0.00 3.85
3756 6221 4.056050 CGTTAGTGTGCTTGTTAGGAGTT 58.944 43.478 0.00 0.00 0.00 3.01
3757 6222 4.510340 CGTTAGTGTGCTTGTTAGGAGTTT 59.490 41.667 0.00 0.00 0.00 2.66
3758 6223 5.333111 CGTTAGTGTGCTTGTTAGGAGTTTC 60.333 44.000 0.00 0.00 0.00 2.78
3759 6224 4.150897 AGTGTGCTTGTTAGGAGTTTCA 57.849 40.909 0.00 0.00 0.00 2.69
3760 6225 4.718961 AGTGTGCTTGTTAGGAGTTTCAT 58.281 39.130 0.00 0.00 0.00 2.57
3761 6226 5.133221 AGTGTGCTTGTTAGGAGTTTCATT 58.867 37.500 0.00 0.00 0.00 2.57
3762 6227 5.009010 AGTGTGCTTGTTAGGAGTTTCATTG 59.991 40.000 0.00 0.00 0.00 2.82
3763 6228 4.887071 TGTGCTTGTTAGGAGTTTCATTGT 59.113 37.500 0.00 0.00 0.00 2.71
3764 6229 5.215160 GTGCTTGTTAGGAGTTTCATTGTG 58.785 41.667 0.00 0.00 0.00 3.33
3765 6230 4.887071 TGCTTGTTAGGAGTTTCATTGTGT 59.113 37.500 0.00 0.00 0.00 3.72
3766 6231 5.359576 TGCTTGTTAGGAGTTTCATTGTGTT 59.640 36.000 0.00 0.00 0.00 3.32
3767 6232 5.915196 GCTTGTTAGGAGTTTCATTGTGTTC 59.085 40.000 0.00 0.00 0.00 3.18
3768 6233 6.238759 GCTTGTTAGGAGTTTCATTGTGTTCT 60.239 38.462 0.00 0.00 0.00 3.01
3769 6234 7.639113 TTGTTAGGAGTTTCATTGTGTTCTT 57.361 32.000 0.00 0.00 0.00 2.52
3770 6235 7.259290 TGTTAGGAGTTTCATTGTGTTCTTC 57.741 36.000 0.00 0.00 0.00 2.87
3771 6236 6.826231 TGTTAGGAGTTTCATTGTGTTCTTCA 59.174 34.615 0.00 0.00 0.00 3.02
3772 6237 7.338196 TGTTAGGAGTTTCATTGTGTTCTTCAA 59.662 33.333 0.00 0.00 0.00 2.69
3773 6238 6.382869 AGGAGTTTCATTGTGTTCTTCAAG 57.617 37.500 0.00 0.00 0.00 3.02
3774 6239 5.888161 AGGAGTTTCATTGTGTTCTTCAAGT 59.112 36.000 0.00 0.00 0.00 3.16
3775 6240 5.973565 GGAGTTTCATTGTGTTCTTCAAGTG 59.026 40.000 0.00 0.00 0.00 3.16
3776 6241 6.404734 GGAGTTTCATTGTGTTCTTCAAGTGT 60.405 38.462 0.00 0.00 0.00 3.55
3777 6242 6.924111 AGTTTCATTGTGTTCTTCAAGTGTT 58.076 32.000 0.00 0.00 0.00 3.32
3778 6243 6.808212 AGTTTCATTGTGTTCTTCAAGTGTTG 59.192 34.615 0.00 0.00 0.00 3.33
3779 6244 6.507958 TTCATTGTGTTCTTCAAGTGTTGA 57.492 33.333 0.00 0.00 38.04 3.18
3780 6245 6.122850 TCATTGTGTTCTTCAAGTGTTGAG 57.877 37.500 0.00 0.00 41.38 3.02
3781 6246 4.963276 TTGTGTTCTTCAAGTGTTGAGG 57.037 40.909 0.00 0.00 41.38 3.86
3782 6247 3.278574 TGTGTTCTTCAAGTGTTGAGGG 58.721 45.455 0.00 0.00 41.38 4.30
3783 6248 3.279434 GTGTTCTTCAAGTGTTGAGGGT 58.721 45.455 0.00 0.00 41.38 4.34
3784 6249 3.694566 GTGTTCTTCAAGTGTTGAGGGTT 59.305 43.478 0.00 0.00 41.38 4.11
3785 6250 3.694072 TGTTCTTCAAGTGTTGAGGGTTG 59.306 43.478 0.00 0.00 41.38 3.77
3786 6251 2.297701 TCTTCAAGTGTTGAGGGTTGC 58.702 47.619 0.00 0.00 41.38 4.17
3787 6252 1.002468 CTTCAAGTGTTGAGGGTTGCG 60.002 52.381 0.00 0.00 41.38 4.85
3788 6253 0.817634 TCAAGTGTTGAGGGTTGCGG 60.818 55.000 0.00 0.00 34.08 5.69
3789 6254 1.101049 CAAGTGTTGAGGGTTGCGGT 61.101 55.000 0.00 0.00 0.00 5.68
3790 6255 0.395173 AAGTGTTGAGGGTTGCGGTT 60.395 50.000 0.00 0.00 0.00 4.44
3791 6256 1.101049 AGTGTTGAGGGTTGCGGTTG 61.101 55.000 0.00 0.00 0.00 3.77
3792 6257 1.077357 TGTTGAGGGTTGCGGTTGT 60.077 52.632 0.00 0.00 0.00 3.32
3793 6258 0.681564 TGTTGAGGGTTGCGGTTGTT 60.682 50.000 0.00 0.00 0.00 2.83
3794 6259 0.248866 GTTGAGGGTTGCGGTTGTTG 60.249 55.000 0.00 0.00 0.00 3.33
3795 6260 0.681564 TTGAGGGTTGCGGTTGTTGT 60.682 50.000 0.00 0.00 0.00 3.32
3796 6261 0.681564 TGAGGGTTGCGGTTGTTGTT 60.682 50.000 0.00 0.00 0.00 2.83
3797 6262 0.458260 GAGGGTTGCGGTTGTTGTTT 59.542 50.000 0.00 0.00 0.00 2.83
3798 6263 0.174617 AGGGTTGCGGTTGTTGTTTG 59.825 50.000 0.00 0.00 0.00 2.93
3799 6264 0.108567 GGGTTGCGGTTGTTGTTTGT 60.109 50.000 0.00 0.00 0.00 2.83
3800 6265 1.673329 GGGTTGCGGTTGTTGTTTGTT 60.673 47.619 0.00 0.00 0.00 2.83
3801 6266 2.070028 GGTTGCGGTTGTTGTTTGTTT 58.930 42.857 0.00 0.00 0.00 2.83
3802 6267 3.251571 GGTTGCGGTTGTTGTTTGTTTA 58.748 40.909 0.00 0.00 0.00 2.01
3803 6268 3.304826 GGTTGCGGTTGTTGTTTGTTTAG 59.695 43.478 0.00 0.00 0.00 1.85
3804 6269 4.167268 GTTGCGGTTGTTGTTTGTTTAGA 58.833 39.130 0.00 0.00 0.00 2.10
3805 6270 4.022464 TGCGGTTGTTGTTTGTTTAGAG 57.978 40.909 0.00 0.00 0.00 2.43
3806 6271 3.181495 TGCGGTTGTTGTTTGTTTAGAGG 60.181 43.478 0.00 0.00 0.00 3.69
3807 6272 3.794138 GCGGTTGTTGTTTGTTTAGAGGG 60.794 47.826 0.00 0.00 0.00 4.30
3808 6273 3.713288 GGTTGTTGTTTGTTTAGAGGGC 58.287 45.455 0.00 0.00 0.00 5.19
3809 6274 3.383505 GGTTGTTGTTTGTTTAGAGGGCT 59.616 43.478 0.00 0.00 0.00 5.19
3810 6275 4.359706 GTTGTTGTTTGTTTAGAGGGCTG 58.640 43.478 0.00 0.00 0.00 4.85
3811 6276 2.360801 TGTTGTTTGTTTAGAGGGCTGC 59.639 45.455 0.00 0.00 0.00 5.25
3812 6277 2.623416 GTTGTTTGTTTAGAGGGCTGCT 59.377 45.455 0.00 0.00 0.00 4.24
3813 6278 2.944129 TGTTTGTTTAGAGGGCTGCTT 58.056 42.857 0.00 0.00 0.00 3.91
3814 6279 4.093472 TGTTTGTTTAGAGGGCTGCTTA 57.907 40.909 0.00 0.00 0.00 3.09
3815 6280 4.465886 TGTTTGTTTAGAGGGCTGCTTAA 58.534 39.130 0.00 0.00 0.00 1.85
3816 6281 4.518970 TGTTTGTTTAGAGGGCTGCTTAAG 59.481 41.667 0.00 0.00 0.00 1.85
3827 6292 2.050477 CTGCTTAAGCGGTTTTGGTG 57.950 50.000 25.42 3.21 45.83 4.17
3828 6293 1.336755 CTGCTTAAGCGGTTTTGGTGT 59.663 47.619 25.42 0.00 45.83 4.16
3829 6294 1.751924 TGCTTAAGCGGTTTTGGTGTT 59.248 42.857 21.97 0.00 45.83 3.32
3830 6295 2.166664 TGCTTAAGCGGTTTTGGTGTTT 59.833 40.909 21.97 0.00 45.83 2.83
3831 6296 2.792674 GCTTAAGCGGTTTTGGTGTTTC 59.207 45.455 12.53 0.00 0.00 2.78
3832 6297 3.377439 CTTAAGCGGTTTTGGTGTTTCC 58.623 45.455 4.64 0.00 0.00 3.13
3833 6298 1.480789 AAGCGGTTTTGGTGTTTCCT 58.519 45.000 0.00 0.00 37.07 3.36
3834 6299 2.351706 AGCGGTTTTGGTGTTTCCTA 57.648 45.000 0.00 0.00 37.07 2.94
3835 6300 2.871453 AGCGGTTTTGGTGTTTCCTAT 58.129 42.857 0.00 0.00 37.07 2.57
3836 6301 3.227614 AGCGGTTTTGGTGTTTCCTATT 58.772 40.909 0.00 0.00 37.07 1.73
3837 6302 3.639561 AGCGGTTTTGGTGTTTCCTATTT 59.360 39.130 0.00 0.00 37.07 1.40
3838 6303 4.100344 AGCGGTTTTGGTGTTTCCTATTTT 59.900 37.500 0.00 0.00 37.07 1.82
3839 6304 4.210328 GCGGTTTTGGTGTTTCCTATTTTG 59.790 41.667 0.00 0.00 37.07 2.44
3840 6305 5.353111 CGGTTTTGGTGTTTCCTATTTTGT 58.647 37.500 0.00 0.00 37.07 2.83
3841 6306 5.233263 CGGTTTTGGTGTTTCCTATTTTGTG 59.767 40.000 0.00 0.00 37.07 3.33
3842 6307 6.342111 GGTTTTGGTGTTTCCTATTTTGTGA 58.658 36.000 0.00 0.00 37.07 3.58
3843 6308 6.478673 GGTTTTGGTGTTTCCTATTTTGTGAG 59.521 38.462 0.00 0.00 37.07 3.51
3844 6309 6.783708 TTTGGTGTTTCCTATTTTGTGAGT 57.216 33.333 0.00 0.00 37.07 3.41
3845 6310 7.883391 TTTGGTGTTTCCTATTTTGTGAGTA 57.117 32.000 0.00 0.00 37.07 2.59
3846 6311 7.504924 TTGGTGTTTCCTATTTTGTGAGTAG 57.495 36.000 0.00 0.00 37.07 2.57
3847 6312 6.597562 TGGTGTTTCCTATTTTGTGAGTAGT 58.402 36.000 0.00 0.00 37.07 2.73
3848 6313 6.708949 TGGTGTTTCCTATTTTGTGAGTAGTC 59.291 38.462 0.00 0.00 37.07 2.59
3849 6314 6.148976 GGTGTTTCCTATTTTGTGAGTAGTCC 59.851 42.308 0.00 0.00 0.00 3.85
3850 6315 5.929992 TGTTTCCTATTTTGTGAGTAGTCCG 59.070 40.000 0.00 0.00 0.00 4.79
3851 6316 4.119442 TCCTATTTTGTGAGTAGTCCGC 57.881 45.455 0.00 0.00 0.00 5.54
3852 6317 3.512329 TCCTATTTTGTGAGTAGTCCGCA 59.488 43.478 0.00 0.00 0.00 5.69
3853 6318 4.161565 TCCTATTTTGTGAGTAGTCCGCAT 59.838 41.667 0.00 0.00 0.00 4.73
3854 6319 4.876107 CCTATTTTGTGAGTAGTCCGCATT 59.124 41.667 0.00 0.00 0.00 3.56
3855 6320 5.354234 CCTATTTTGTGAGTAGTCCGCATTT 59.646 40.000 0.00 0.00 0.00 2.32
3856 6321 4.481930 TTTTGTGAGTAGTCCGCATTTG 57.518 40.909 0.00 0.00 0.00 2.32
3857 6322 2.093306 TGTGAGTAGTCCGCATTTGG 57.907 50.000 0.00 0.00 0.00 3.28
3858 6323 1.338674 TGTGAGTAGTCCGCATTTGGG 60.339 52.381 0.00 0.00 0.00 4.12
3859 6324 1.066430 GTGAGTAGTCCGCATTTGGGA 60.066 52.381 0.00 0.00 0.00 4.37
3860 6325 1.207089 TGAGTAGTCCGCATTTGGGAG 59.793 52.381 0.00 0.00 33.31 4.30
3861 6326 1.207329 GAGTAGTCCGCATTTGGGAGT 59.793 52.381 0.00 0.00 40.33 3.85
3862 6327 1.066143 AGTAGTCCGCATTTGGGAGTG 60.066 52.381 0.00 0.00 37.76 3.51
3863 6328 0.981183 TAGTCCGCATTTGGGAGTGT 59.019 50.000 0.00 0.00 37.76 3.55
3864 6329 0.981183 AGTCCGCATTTGGGAGTGTA 59.019 50.000 0.00 0.00 35.89 2.90
3865 6330 1.559682 AGTCCGCATTTGGGAGTGTAT 59.440 47.619 0.00 0.00 35.89 2.29
3866 6331 1.940613 GTCCGCATTTGGGAGTGTATC 59.059 52.381 0.00 0.00 33.31 2.24
3867 6332 0.937304 CCGCATTTGGGAGTGTATCG 59.063 55.000 0.00 0.00 0.00 2.92
3868 6333 0.937304 CGCATTTGGGAGTGTATCGG 59.063 55.000 0.00 0.00 0.00 4.18
3869 6334 1.742411 CGCATTTGGGAGTGTATCGGT 60.742 52.381 0.00 0.00 0.00 4.69
3870 6335 2.365582 GCATTTGGGAGTGTATCGGTT 58.634 47.619 0.00 0.00 0.00 4.44
3871 6336 2.752903 GCATTTGGGAGTGTATCGGTTT 59.247 45.455 0.00 0.00 0.00 3.27
3872 6337 3.192633 GCATTTGGGAGTGTATCGGTTTT 59.807 43.478 0.00 0.00 0.00 2.43
3873 6338 4.321675 GCATTTGGGAGTGTATCGGTTTTT 60.322 41.667 0.00 0.00 0.00 1.94
3874 6339 4.839668 TTTGGGAGTGTATCGGTTTTTG 57.160 40.909 0.00 0.00 0.00 2.44
3875 6340 2.156098 TGGGAGTGTATCGGTTTTTGC 58.844 47.619 0.00 0.00 0.00 3.68
3876 6341 1.471287 GGGAGTGTATCGGTTTTTGCC 59.529 52.381 0.00 0.00 0.00 4.52
3877 6342 2.433436 GGAGTGTATCGGTTTTTGCCT 58.567 47.619 0.00 0.00 0.00 4.75
3878 6343 2.161609 GGAGTGTATCGGTTTTTGCCTG 59.838 50.000 0.00 0.00 0.00 4.85
3879 6344 2.159382 AGTGTATCGGTTTTTGCCTGG 58.841 47.619 0.00 0.00 0.00 4.45
3880 6345 1.883926 GTGTATCGGTTTTTGCCTGGT 59.116 47.619 0.00 0.00 0.00 4.00
3881 6346 2.295070 GTGTATCGGTTTTTGCCTGGTT 59.705 45.455 0.00 0.00 0.00 3.67
3882 6347 2.959707 TGTATCGGTTTTTGCCTGGTTT 59.040 40.909 0.00 0.00 0.00 3.27
3883 6348 3.385111 TGTATCGGTTTTTGCCTGGTTTT 59.615 39.130 0.00 0.00 0.00 2.43
3884 6349 3.552132 ATCGGTTTTTGCCTGGTTTTT 57.448 38.095 0.00 0.00 0.00 1.94
3885 6350 2.894902 TCGGTTTTTGCCTGGTTTTTC 58.105 42.857 0.00 0.00 0.00 2.29
3886 6351 1.590698 CGGTTTTTGCCTGGTTTTTCG 59.409 47.619 0.00 0.00 0.00 3.46
3887 6352 2.623535 GGTTTTTGCCTGGTTTTTCGT 58.376 42.857 0.00 0.00 0.00 3.85
3888 6353 3.734293 CGGTTTTTGCCTGGTTTTTCGTA 60.734 43.478 0.00 0.00 0.00 3.43
3889 6354 4.182339 GGTTTTTGCCTGGTTTTTCGTAA 58.818 39.130 0.00 0.00 0.00 3.18
3890 6355 4.630505 GGTTTTTGCCTGGTTTTTCGTAAA 59.369 37.500 0.00 0.00 0.00 2.01
3891 6356 5.294799 GGTTTTTGCCTGGTTTTTCGTAAAT 59.705 36.000 0.00 0.00 0.00 1.40
3892 6357 6.183360 GGTTTTTGCCTGGTTTTTCGTAAATT 60.183 34.615 0.00 0.00 0.00 1.82
3893 6358 7.011202 GGTTTTTGCCTGGTTTTTCGTAAATTA 59.989 33.333 0.00 0.00 0.00 1.40
3894 6359 8.388853 GTTTTTGCCTGGTTTTTCGTAAATTAA 58.611 29.630 0.00 0.00 0.00 1.40
3895 6360 8.664211 TTTTGCCTGGTTTTTCGTAAATTAAT 57.336 26.923 0.00 0.00 0.00 1.40
3896 6361 8.664211 TTTGCCTGGTTTTTCGTAAATTAATT 57.336 26.923 0.00 0.00 0.00 1.40
3897 6362 9.760077 TTTGCCTGGTTTTTCGTAAATTAATTA 57.240 25.926 0.01 0.00 0.00 1.40
3898 6363 8.973835 TGCCTGGTTTTTCGTAAATTAATTAG 57.026 30.769 0.01 0.00 0.00 1.73
3899 6364 8.794553 TGCCTGGTTTTTCGTAAATTAATTAGA 58.205 29.630 0.01 0.00 0.00 2.10
3900 6365 9.069078 GCCTGGTTTTTCGTAAATTAATTAGAC 57.931 33.333 0.01 2.44 0.00 2.59
3931 6396 9.278734 CTTTTCTTCTTAATTAATCAACGAGGC 57.721 33.333 0.00 0.00 0.00 4.70
3932 6397 7.915293 TTCTTCTTAATTAATCAACGAGGCA 57.085 32.000 0.00 0.00 0.00 4.75
3933 6398 7.915293 TCTTCTTAATTAATCAACGAGGCAA 57.085 32.000 0.00 0.00 0.00 4.52
3934 6399 8.330466 TCTTCTTAATTAATCAACGAGGCAAA 57.670 30.769 0.00 0.00 0.00 3.68
3935 6400 8.956426 TCTTCTTAATTAATCAACGAGGCAAAT 58.044 29.630 0.00 0.00 0.00 2.32
3954 6419 6.683090 CAAATATTTTTGCCTTCGTTTCGA 57.317 33.333 0.00 0.00 36.13 3.71
3955 6420 7.099666 CAAATATTTTTGCCTTCGTTTCGAA 57.900 32.000 0.00 0.00 38.45 3.71
3956 6421 7.559845 CAAATATTTTTGCCTTCGTTTCGAAA 58.440 30.769 6.47 6.47 39.31 3.46
3957 6422 7.701809 AATATTTTTGCCTTCGTTTCGAAAA 57.298 28.000 13.10 0.00 45.23 2.29
3958 6423 7.701809 ATATTTTTGCCTTCGTTTCGAAAAA 57.298 28.000 13.10 3.41 45.23 1.94
3999 6464 3.266240 GGCTTAACCCACCCAAGAG 57.734 57.895 0.00 0.00 0.00 2.85
4003 6468 0.250553 TTAACCCACCCAAGAGCGTG 60.251 55.000 0.00 0.00 0.00 5.34
4010 6475 1.746615 CCCAAGAGCGTGGATGGTG 60.747 63.158 3.95 0.00 41.65 4.17
4024 6490 2.956964 GGTGAAGATCTCGCCGCG 60.957 66.667 6.39 6.39 44.72 6.46
4025 6491 2.102357 GTGAAGATCTCGCCGCGA 59.898 61.111 15.90 15.90 0.00 5.87
4034 6500 2.485582 TCGCCGCGAGAGAAAGAG 59.514 61.111 12.39 0.00 0.00 2.85
4036 6502 1.585002 CGCCGCGAGAGAAAGAGAG 60.585 63.158 8.23 0.00 0.00 3.20
4044 6510 3.119495 GCGAGAGAAAGAGAGAGAAAGCT 60.119 47.826 0.00 0.00 0.00 3.74
4050 6516 5.337788 AGAAAGAGAGAGAAAGCTAAGGGA 58.662 41.667 0.00 0.00 0.00 4.20
4051 6517 5.782845 AGAAAGAGAGAGAAAGCTAAGGGAA 59.217 40.000 0.00 0.00 0.00 3.97
4073 6539 1.755179 AAAAGGTGCATCCCATCTCG 58.245 50.000 0.00 0.00 32.40 4.04
4106 6572 1.019805 CGTCCCGCTTTTTCTCCTCC 61.020 60.000 0.00 0.00 0.00 4.30
4154 6626 1.198408 TGTCGTCGTCTTATCGCAAGT 59.802 47.619 0.00 0.00 39.48 3.16
4156 6628 3.064408 TGTCGTCGTCTTATCGCAAGTAT 59.936 43.478 0.00 0.00 39.48 2.12
4277 6767 7.048629 TGAAGAACAAACCAAAAGATGCATA 57.951 32.000 0.00 0.00 0.00 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.603473 TGTGCAGGAGGGCTACGT 60.603 61.111 0.00 0.00 34.04 3.57
82 83 3.081409 GGGGTCGCTGGCTTAGGA 61.081 66.667 0.00 0.00 0.00 2.94
95 96 3.391382 CTTCGGAGGAAGCGGGGT 61.391 66.667 0.00 0.00 42.90 4.95
150 157 0.465460 ATTGTTGCCACTGGTCGTGT 60.465 50.000 0.00 0.00 42.20 4.49
169 176 1.680735 GCTTCACACCACCATTTGTCA 59.319 47.619 0.00 0.00 0.00 3.58
171 178 0.667993 CGCTTCACACCACCATTTGT 59.332 50.000 0.00 0.00 0.00 2.83
184 191 3.760035 GGAGGACGAGGCGCTTCA 61.760 66.667 20.22 0.00 0.00 3.02
500 1482 3.847602 CGCCTCCCCTGCTCTCTG 61.848 72.222 0.00 0.00 0.00 3.35
545 1528 4.825085 GGTTGGGTTCAGTCAAGTTGAATA 59.175 41.667 7.25 0.00 36.96 1.75
559 1542 4.279671 TGTTCACATTGTATGGTTGGGTTC 59.720 41.667 0.00 0.00 33.60 3.62
573 1556 4.351111 AGAGAGTAAAGGGGTGTTCACATT 59.649 41.667 5.32 0.00 0.00 2.71
661 1644 0.773305 ACCGGGTAAGTTTCCCCCTT 60.773 55.000 11.70 0.00 41.78 3.95
668 1651 6.041069 TCAAATCATCAAAACCGGGTAAGTTT 59.959 34.615 6.32 0.00 39.07 2.66
671 1654 5.393027 CCTCAAATCATCAAAACCGGGTAAG 60.393 44.000 6.32 0.00 0.00 2.34
701 1684 5.354234 ACCACAAGTCGAATTTGGTATGATC 59.646 40.000 22.17 0.00 38.84 2.92
721 1704 4.596585 CCCCACCACCACCACCAC 62.597 72.222 0.00 0.00 0.00 4.16
746 1729 1.790818 GGTCCGAGGGAGAAATACCT 58.209 55.000 0.00 0.00 40.54 3.08
754 1737 1.815421 CAAATGCGGTCCGAGGGAG 60.815 63.158 17.49 0.00 29.39 4.30
772 1755 5.773176 TGAAAGAAGTCTATTTTTCACCCCC 59.227 40.000 0.00 0.00 35.34 5.40
874 1857 0.774908 TGGATTATAAAGGCCCGGGG 59.225 55.000 25.28 9.31 0.00 5.73
875 1858 2.626266 GTTTGGATTATAAAGGCCCGGG 59.374 50.000 19.09 19.09 0.00 5.73
876 1859 2.626266 GGTTTGGATTATAAAGGCCCGG 59.374 50.000 0.00 0.00 0.00 5.73
916 2355 2.187946 GGGATGTCTGCGAGGTGG 59.812 66.667 0.00 0.00 0.00 4.61
971 2410 4.821589 GAGGAGAAGTGGCGGCGG 62.822 72.222 9.78 0.00 0.00 6.13
1150 2590 4.943705 AGCAAGACAGAAAGAACAGAACAA 59.056 37.500 0.00 0.00 0.00 2.83
1418 2860 7.877097 ACTCAGGATCTAAACATCATATTCTGC 59.123 37.037 0.00 0.00 0.00 4.26
1460 3123 3.454375 GTCAGACCAACAGAAACTCGAA 58.546 45.455 0.00 0.00 0.00 3.71
1477 3140 5.458891 CAAAATCAAAGCTCAGAAGGTCAG 58.541 41.667 0.00 0.00 31.34 3.51
1541 3204 1.412710 TGAGATCCACCGGTAATCAGC 59.587 52.381 23.80 17.42 0.00 4.26
1710 3375 7.810766 AAAATGTTTGATAACAGGCATTACG 57.189 32.000 0.00 0.00 46.71 3.18
1766 3432 7.103641 CACCTAACTGGAGTACAACACATAAT 58.896 38.462 0.00 0.00 39.71 1.28
1897 3563 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
1898 3564 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
1899 3565 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
1900 3566 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
1901 3567 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
1902 3568 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
1903 3569 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
1904 3570 8.605746 TGAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
1917 3583 8.975439 CACTAGTGTAGTATGAAAAACGTTCTT 58.025 33.333 15.06 0.00 37.23 2.52
1918 3584 8.139989 ACACTAGTGTAGTATGAAAAACGTTCT 58.860 33.333 26.91 0.00 42.90 3.01
1919 3585 8.290663 ACACTAGTGTAGTATGAAAAACGTTC 57.709 34.615 26.91 0.00 42.90 3.95
1920 3586 7.922278 TGACACTAGTGTAGTATGAAAAACGTT 59.078 33.333 27.98 0.00 45.05 3.99
1921 3587 7.428020 TGACACTAGTGTAGTATGAAAAACGT 58.572 34.615 27.98 0.00 45.05 3.99
1922 3588 7.862741 TGACACTAGTGTAGTATGAAAAACG 57.137 36.000 27.98 0.00 45.05 3.60
1926 3592 8.757789 CGTTTTTGACACTAGTGTAGTATGAAA 58.242 33.333 27.98 18.03 45.05 2.69
1928 3594 7.428020 ACGTTTTTGACACTAGTGTAGTATGA 58.572 34.615 27.98 10.39 45.05 2.15
1929 3595 7.633361 ACGTTTTTGACACTAGTGTAGTATG 57.367 36.000 27.98 17.54 45.05 2.39
1930 3596 8.139989 AGAACGTTTTTGACACTAGTGTAGTAT 58.860 33.333 27.98 5.50 45.05 2.12
1931 3597 7.483307 AGAACGTTTTTGACACTAGTGTAGTA 58.517 34.615 27.98 14.71 45.05 1.82
1932 3598 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
1933 3599 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
1934 3600 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
1941 3607 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
1942 3608 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
1944 3610 9.451002 TGTCCCATAATATAAGAACGTTTTTGA 57.549 29.630 13.87 2.81 0.00 2.69
1945 3611 9.716507 CTGTCCCATAATATAAGAACGTTTTTG 57.283 33.333 13.87 0.00 0.00 2.44
1946 3612 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
1947 3613 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
1948 3614 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
1949 3615 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
1952 3618 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
1953 3619 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
1954 3620 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
1960 3626 9.805204 AAATATATACTCCCTCTGTCCCATAAT 57.195 33.333 0.00 0.00 0.00 1.28
1962 3628 9.937876 CTAAATATATACTCCCTCTGTCCCATA 57.062 37.037 0.00 0.00 0.00 2.74
1963 3629 8.633724 TCTAAATATATACTCCCTCTGTCCCAT 58.366 37.037 0.00 0.00 0.00 4.00
1965 3631 9.495382 AATCTAAATATATACTCCCTCTGTCCC 57.505 37.037 0.00 0.00 0.00 4.46
2290 4021 5.426689 TGGCCATATGAATAGATCCACTC 57.573 43.478 0.00 0.00 0.00 3.51
2512 4296 0.383231 GCATGTGCAATGGCTAGGAC 59.617 55.000 0.00 0.00 41.91 3.85
2744 4530 1.895798 TCAATCTCAGACTTGCGGAGT 59.104 47.619 0.00 0.00 42.70 3.85
3204 5028 3.823281 AGGAACAGAGCATGATCAGAG 57.177 47.619 14.38 5.18 32.51 3.35
3289 5113 2.485426 ACGAGACACTGAAAATGGCATG 59.515 45.455 0.00 0.00 0.00 4.06
3569 6034 2.045586 CGTACGTGTCGTTGTCATCAA 58.954 47.619 7.22 0.00 41.54 2.57
3571 6036 1.678360 ACGTACGTGTCGTTGTCATC 58.322 50.000 22.14 0.00 41.54 2.92
3572 6037 3.851620 ACGTACGTGTCGTTGTCAT 57.148 47.368 22.14 0.00 41.54 3.06
3592 6057 2.768527 TGAGCCACCCATTTGTCAAAAA 59.231 40.909 1.31 0.00 0.00 1.94
3593 6058 2.392662 TGAGCCACCCATTTGTCAAAA 58.607 42.857 1.31 0.00 0.00 2.44
3594 6059 2.079170 TGAGCCACCCATTTGTCAAA 57.921 45.000 0.00 0.00 0.00 2.69
3595 6060 1.962807 CTTGAGCCACCCATTTGTCAA 59.037 47.619 0.00 0.00 0.00 3.18
3596 6061 1.144708 TCTTGAGCCACCCATTTGTCA 59.855 47.619 0.00 0.00 0.00 3.58
3597 6062 1.815003 CTCTTGAGCCACCCATTTGTC 59.185 52.381 0.00 0.00 0.00 3.18
3598 6063 1.145738 ACTCTTGAGCCACCCATTTGT 59.854 47.619 0.00 0.00 0.00 2.83
3599 6064 1.815003 GACTCTTGAGCCACCCATTTG 59.185 52.381 0.00 0.00 0.00 2.32
3600 6065 1.425066 TGACTCTTGAGCCACCCATTT 59.575 47.619 0.00 0.00 0.00 2.32
3601 6066 1.067295 TGACTCTTGAGCCACCCATT 58.933 50.000 0.00 0.00 0.00 3.16
3602 6067 1.067295 TTGACTCTTGAGCCACCCAT 58.933 50.000 0.00 0.00 0.00 4.00
3603 6068 0.108585 GTTGACTCTTGAGCCACCCA 59.891 55.000 0.00 0.00 0.00 4.51
3604 6069 0.108585 TGTTGACTCTTGAGCCACCC 59.891 55.000 0.00 0.00 0.00 4.61
3605 6070 2.079925 GATGTTGACTCTTGAGCCACC 58.920 52.381 0.00 0.00 0.00 4.61
3606 6071 1.728971 CGATGTTGACTCTTGAGCCAC 59.271 52.381 0.00 0.00 0.00 5.01
3607 6072 1.618343 TCGATGTTGACTCTTGAGCCA 59.382 47.619 0.00 0.00 0.00 4.75
3608 6073 1.996191 GTCGATGTTGACTCTTGAGCC 59.004 52.381 0.00 0.00 35.95 4.70
3609 6074 1.996191 GGTCGATGTTGACTCTTGAGC 59.004 52.381 0.00 0.00 38.91 4.26
3610 6075 3.584406 AGGTCGATGTTGACTCTTGAG 57.416 47.619 0.00 0.00 38.91 3.02
3611 6076 3.653344 CAAGGTCGATGTTGACTCTTGA 58.347 45.455 17.62 0.00 42.90 3.02
3612 6077 2.158449 GCAAGGTCGATGTTGACTCTTG 59.842 50.000 17.92 17.92 43.00 3.02
3613 6078 2.224281 TGCAAGGTCGATGTTGACTCTT 60.224 45.455 12.51 0.82 38.91 2.85
3614 6079 1.344438 TGCAAGGTCGATGTTGACTCT 59.656 47.619 12.51 0.00 38.91 3.24
3615 6080 1.795768 TGCAAGGTCGATGTTGACTC 58.204 50.000 12.51 0.00 38.91 3.36
3616 6081 2.254546 TTGCAAGGTCGATGTTGACT 57.745 45.000 12.51 0.00 38.91 3.41
3617 6082 2.548057 TCTTTGCAAGGTCGATGTTGAC 59.452 45.455 8.56 5.83 38.17 3.18
3618 6083 2.844946 TCTTTGCAAGGTCGATGTTGA 58.155 42.857 8.56 0.00 0.00 3.18
3619 6084 3.250762 TCTTCTTTGCAAGGTCGATGTTG 59.749 43.478 8.56 5.56 0.00 3.33
3620 6085 3.476552 TCTTCTTTGCAAGGTCGATGTT 58.523 40.909 8.56 0.00 0.00 2.71
3621 6086 3.126001 TCTTCTTTGCAAGGTCGATGT 57.874 42.857 8.56 0.00 0.00 3.06
3622 6087 3.730061 GCATCTTCTTTGCAAGGTCGATG 60.730 47.826 24.28 24.28 39.90 3.84
3623 6088 2.421424 GCATCTTCTTTGCAAGGTCGAT 59.579 45.455 8.56 8.62 39.90 3.59
3624 6089 1.806542 GCATCTTCTTTGCAAGGTCGA 59.193 47.619 8.56 6.72 39.90 4.20
3625 6090 1.135575 GGCATCTTCTTTGCAAGGTCG 60.136 52.381 8.56 1.38 41.95 4.79
3626 6091 1.888512 TGGCATCTTCTTTGCAAGGTC 59.111 47.619 8.56 0.00 41.95 3.85
3627 6092 1.999648 TGGCATCTTCTTTGCAAGGT 58.000 45.000 8.56 0.00 41.95 3.50
3628 6093 2.298163 ACTTGGCATCTTCTTTGCAAGG 59.702 45.455 1.35 1.35 41.95 3.61
3629 6094 3.655276 ACTTGGCATCTTCTTTGCAAG 57.345 42.857 0.00 0.00 41.95 4.01
3630 6095 4.022068 CCTTACTTGGCATCTTCTTTGCAA 60.022 41.667 0.00 0.00 41.95 4.08
3631 6096 3.507233 CCTTACTTGGCATCTTCTTTGCA 59.493 43.478 0.00 0.00 41.95 4.08
3632 6097 3.758554 TCCTTACTTGGCATCTTCTTTGC 59.241 43.478 0.00 0.00 39.41 3.68
3633 6098 5.248640 TCTCCTTACTTGGCATCTTCTTTG 58.751 41.667 0.00 0.00 0.00 2.77
3634 6099 5.505181 TCTCCTTACTTGGCATCTTCTTT 57.495 39.130 0.00 0.00 0.00 2.52
3635 6100 5.505181 TTCTCCTTACTTGGCATCTTCTT 57.495 39.130 0.00 0.00 0.00 2.52
3636 6101 5.249420 GTTTCTCCTTACTTGGCATCTTCT 58.751 41.667 0.00 0.00 0.00 2.85
3637 6102 4.396478 GGTTTCTCCTTACTTGGCATCTTC 59.604 45.833 0.00 0.00 0.00 2.87
3638 6103 4.336280 GGTTTCTCCTTACTTGGCATCTT 58.664 43.478 0.00 0.00 0.00 2.40
3639 6104 3.619979 CGGTTTCTCCTTACTTGGCATCT 60.620 47.826 0.00 0.00 0.00 2.90
3640 6105 2.678336 CGGTTTCTCCTTACTTGGCATC 59.322 50.000 0.00 0.00 0.00 3.91
3641 6106 2.304761 TCGGTTTCTCCTTACTTGGCAT 59.695 45.455 0.00 0.00 0.00 4.40
3642 6107 1.695242 TCGGTTTCTCCTTACTTGGCA 59.305 47.619 0.00 0.00 0.00 4.92
3643 6108 2.467566 TCGGTTTCTCCTTACTTGGC 57.532 50.000 0.00 0.00 0.00 4.52
3644 6109 4.267349 TCTTCGGTTTCTCCTTACTTGG 57.733 45.455 0.00 0.00 0.00 3.61
3645 6110 5.298347 ACTTCTTCGGTTTCTCCTTACTTG 58.702 41.667 0.00 0.00 0.00 3.16
3646 6111 5.548181 ACTTCTTCGGTTTCTCCTTACTT 57.452 39.130 0.00 0.00 0.00 2.24
3647 6112 6.008960 TCTACTTCTTCGGTTTCTCCTTACT 58.991 40.000 0.00 0.00 0.00 2.24
3648 6113 6.264841 TCTACTTCTTCGGTTTCTCCTTAC 57.735 41.667 0.00 0.00 0.00 2.34
3649 6114 6.906157 TTCTACTTCTTCGGTTTCTCCTTA 57.094 37.500 0.00 0.00 0.00 2.69
3650 6115 5.803237 TTCTACTTCTTCGGTTTCTCCTT 57.197 39.130 0.00 0.00 0.00 3.36
3651 6116 5.803237 TTTCTACTTCTTCGGTTTCTCCT 57.197 39.130 0.00 0.00 0.00 3.69
3652 6117 6.259387 TGTTTTTCTACTTCTTCGGTTTCTCC 59.741 38.462 0.00 0.00 0.00 3.71
3653 6118 7.242914 TGTTTTTCTACTTCTTCGGTTTCTC 57.757 36.000 0.00 0.00 0.00 2.87
3654 6119 7.336176 ACTTGTTTTTCTACTTCTTCGGTTTCT 59.664 33.333 0.00 0.00 0.00 2.52
3655 6120 7.428472 CACTTGTTTTTCTACTTCTTCGGTTTC 59.572 37.037 0.00 0.00 0.00 2.78
3656 6121 7.094506 ACACTTGTTTTTCTACTTCTTCGGTTT 60.095 33.333 0.00 0.00 0.00 3.27
3657 6122 6.373495 ACACTTGTTTTTCTACTTCTTCGGTT 59.627 34.615 0.00 0.00 0.00 4.44
3658 6123 5.878669 ACACTTGTTTTTCTACTTCTTCGGT 59.121 36.000 0.00 0.00 0.00 4.69
3659 6124 6.192360 CACACTTGTTTTTCTACTTCTTCGG 58.808 40.000 0.00 0.00 0.00 4.30
3660 6125 6.192360 CCACACTTGTTTTTCTACTTCTTCG 58.808 40.000 0.00 0.00 0.00 3.79
3661 6126 5.971792 GCCACACTTGTTTTTCTACTTCTTC 59.028 40.000 0.00 0.00 0.00 2.87
3662 6127 5.417580 TGCCACACTTGTTTTTCTACTTCTT 59.582 36.000 0.00 0.00 0.00 2.52
3663 6128 4.947388 TGCCACACTTGTTTTTCTACTTCT 59.053 37.500 0.00 0.00 0.00 2.85
3664 6129 5.034797 GTGCCACACTTGTTTTTCTACTTC 58.965 41.667 0.00 0.00 0.00 3.01
3665 6130 4.142249 GGTGCCACACTTGTTTTTCTACTT 60.142 41.667 0.00 0.00 34.40 2.24
3666 6131 3.380320 GGTGCCACACTTGTTTTTCTACT 59.620 43.478 0.00 0.00 34.40 2.57
3667 6132 3.129638 TGGTGCCACACTTGTTTTTCTAC 59.870 43.478 0.00 0.00 34.40 2.59
3668 6133 3.357203 TGGTGCCACACTTGTTTTTCTA 58.643 40.909 0.00 0.00 34.40 2.10
3669 6134 2.175202 TGGTGCCACACTTGTTTTTCT 58.825 42.857 0.00 0.00 34.40 2.52
3670 6135 2.663826 TGGTGCCACACTTGTTTTTC 57.336 45.000 0.00 0.00 34.40 2.29
3671 6136 3.530535 GAATGGTGCCACACTTGTTTTT 58.469 40.909 0.00 0.00 34.40 1.94
3672 6137 2.481104 CGAATGGTGCCACACTTGTTTT 60.481 45.455 0.00 0.00 34.40 2.43
3673 6138 1.066908 CGAATGGTGCCACACTTGTTT 59.933 47.619 0.00 0.00 34.40 2.83
3674 6139 0.667993 CGAATGGTGCCACACTTGTT 59.332 50.000 0.00 0.00 34.40 2.83
3675 6140 0.179032 TCGAATGGTGCCACACTTGT 60.179 50.000 0.00 0.00 34.40 3.16
3676 6141 0.950836 TTCGAATGGTGCCACACTTG 59.049 50.000 0.00 0.00 34.40 3.16
3677 6142 1.608590 CTTTCGAATGGTGCCACACTT 59.391 47.619 0.00 0.00 34.40 3.16
3678 6143 1.202758 TCTTTCGAATGGTGCCACACT 60.203 47.619 10.78 0.00 34.40 3.55
3679 6144 1.234821 TCTTTCGAATGGTGCCACAC 58.765 50.000 10.78 0.00 0.00 3.82
3680 6145 1.811965 CATCTTTCGAATGGTGCCACA 59.188 47.619 10.93 0.00 0.00 4.17
3681 6146 1.812571 ACATCTTTCGAATGGTGCCAC 59.187 47.619 20.74 0.00 0.00 5.01
3682 6147 2.083774 GACATCTTTCGAATGGTGCCA 58.916 47.619 20.74 0.00 0.00 4.92
3683 6148 2.096496 CAGACATCTTTCGAATGGTGCC 59.904 50.000 20.74 12.36 0.00 5.01
3684 6149 2.744202 ACAGACATCTTTCGAATGGTGC 59.256 45.455 20.74 14.46 0.00 5.01
3685 6150 3.125829 CCACAGACATCTTTCGAATGGTG 59.874 47.826 19.58 19.58 0.00 4.17
3686 6151 3.244561 ACCACAGACATCTTTCGAATGGT 60.245 43.478 10.78 9.42 33.09 3.55
3687 6152 3.338249 ACCACAGACATCTTTCGAATGG 58.662 45.455 10.78 8.82 0.00 3.16
3688 6153 5.049474 TGAAACCACAGACATCTTTCGAATG 60.049 40.000 0.00 0.78 0.00 2.67
3689 6154 5.063204 TGAAACCACAGACATCTTTCGAAT 58.937 37.500 0.00 0.00 0.00 3.34
3690 6155 4.447290 TGAAACCACAGACATCTTTCGAA 58.553 39.130 0.00 0.00 0.00 3.71
3691 6156 4.066646 TGAAACCACAGACATCTTTCGA 57.933 40.909 0.00 0.00 0.00 3.71
3692 6157 4.452114 TCATGAAACCACAGACATCTTTCG 59.548 41.667 0.00 0.00 0.00 3.46
3693 6158 5.947228 TCATGAAACCACAGACATCTTTC 57.053 39.130 0.00 0.00 0.00 2.62
3694 6159 5.184479 CCATCATGAAACCACAGACATCTTT 59.816 40.000 0.00 0.00 0.00 2.52
3695 6160 4.703575 CCATCATGAAACCACAGACATCTT 59.296 41.667 0.00 0.00 0.00 2.40
3696 6161 4.019051 TCCATCATGAAACCACAGACATCT 60.019 41.667 0.00 0.00 0.00 2.90
3697 6162 4.264253 TCCATCATGAAACCACAGACATC 58.736 43.478 0.00 0.00 0.00 3.06
3698 6163 4.267536 CTCCATCATGAAACCACAGACAT 58.732 43.478 0.00 0.00 0.00 3.06
3699 6164 3.559811 CCTCCATCATGAAACCACAGACA 60.560 47.826 0.00 0.00 0.00 3.41
3700 6165 3.012518 CCTCCATCATGAAACCACAGAC 58.987 50.000 0.00 0.00 0.00 3.51
3701 6166 2.025981 CCCTCCATCATGAAACCACAGA 60.026 50.000 0.00 0.00 0.00 3.41
3702 6167 2.291153 ACCCTCCATCATGAAACCACAG 60.291 50.000 0.00 0.00 0.00 3.66
3703 6168 1.710244 ACCCTCCATCATGAAACCACA 59.290 47.619 0.00 0.00 0.00 4.17
3704 6169 2.094675 CACCCTCCATCATGAAACCAC 58.905 52.381 0.00 0.00 0.00 4.16
3705 6170 1.005805 CCACCCTCCATCATGAAACCA 59.994 52.381 0.00 0.00 0.00 3.67
3706 6171 1.005924 ACCACCCTCCATCATGAAACC 59.994 52.381 0.00 0.00 0.00 3.27
3707 6172 2.290896 TGACCACCCTCCATCATGAAAC 60.291 50.000 0.00 0.00 0.00 2.78
3708 6173 1.991813 TGACCACCCTCCATCATGAAA 59.008 47.619 0.00 0.00 0.00 2.69
3709 6174 1.561076 CTGACCACCCTCCATCATGAA 59.439 52.381 0.00 0.00 0.00 2.57
3710 6175 1.206878 CTGACCACCCTCCATCATGA 58.793 55.000 0.00 0.00 0.00 3.07
3711 6176 0.914644 ACTGACCACCCTCCATCATG 59.085 55.000 0.00 0.00 0.00 3.07
3712 6177 1.673767 AACTGACCACCCTCCATCAT 58.326 50.000 0.00 0.00 0.00 2.45
3713 6178 1.444933 AAACTGACCACCCTCCATCA 58.555 50.000 0.00 0.00 0.00 3.07
3714 6179 2.437413 GAAAACTGACCACCCTCCATC 58.563 52.381 0.00 0.00 0.00 3.51
3715 6180 1.271379 CGAAAACTGACCACCCTCCAT 60.271 52.381 0.00 0.00 0.00 3.41
3716 6181 0.107831 CGAAAACTGACCACCCTCCA 59.892 55.000 0.00 0.00 0.00 3.86
3717 6182 0.108019 ACGAAAACTGACCACCCTCC 59.892 55.000 0.00 0.00 0.00 4.30
3718 6183 1.963172 AACGAAAACTGACCACCCTC 58.037 50.000 0.00 0.00 0.00 4.30
3719 6184 2.436911 ACTAACGAAAACTGACCACCCT 59.563 45.455 0.00 0.00 0.00 4.34
3720 6185 2.546789 CACTAACGAAAACTGACCACCC 59.453 50.000 0.00 0.00 0.00 4.61
3721 6186 3.001939 CACACTAACGAAAACTGACCACC 59.998 47.826 0.00 0.00 0.00 4.61
3722 6187 3.545426 GCACACTAACGAAAACTGACCAC 60.545 47.826 0.00 0.00 0.00 4.16
3723 6188 2.610374 GCACACTAACGAAAACTGACCA 59.390 45.455 0.00 0.00 0.00 4.02
3724 6189 2.870411 AGCACACTAACGAAAACTGACC 59.130 45.455 0.00 0.00 0.00 4.02
3725 6190 4.201783 ACAAGCACACTAACGAAAACTGAC 60.202 41.667 0.00 0.00 0.00 3.51
3726 6191 3.936453 ACAAGCACACTAACGAAAACTGA 59.064 39.130 0.00 0.00 0.00 3.41
3727 6192 4.273005 ACAAGCACACTAACGAAAACTG 57.727 40.909 0.00 0.00 0.00 3.16
3728 6193 4.957759 AACAAGCACACTAACGAAAACT 57.042 36.364 0.00 0.00 0.00 2.66
3729 6194 5.006941 TCCTAACAAGCACACTAACGAAAAC 59.993 40.000 0.00 0.00 0.00 2.43
3730 6195 5.117584 TCCTAACAAGCACACTAACGAAAA 58.882 37.500 0.00 0.00 0.00 2.29
3731 6196 4.695396 TCCTAACAAGCACACTAACGAAA 58.305 39.130 0.00 0.00 0.00 3.46
3732 6197 4.202182 ACTCCTAACAAGCACACTAACGAA 60.202 41.667 0.00 0.00 0.00 3.85
3733 6198 3.319972 ACTCCTAACAAGCACACTAACGA 59.680 43.478 0.00 0.00 0.00 3.85
3734 6199 3.650139 ACTCCTAACAAGCACACTAACG 58.350 45.455 0.00 0.00 0.00 3.18
3735 6200 5.526111 TGAAACTCCTAACAAGCACACTAAC 59.474 40.000 0.00 0.00 0.00 2.34
3736 6201 5.676552 TGAAACTCCTAACAAGCACACTAA 58.323 37.500 0.00 0.00 0.00 2.24
3737 6202 5.284861 TGAAACTCCTAACAAGCACACTA 57.715 39.130 0.00 0.00 0.00 2.74
3738 6203 4.150897 TGAAACTCCTAACAAGCACACT 57.849 40.909 0.00 0.00 0.00 3.55
3739 6204 5.215160 CAATGAAACTCCTAACAAGCACAC 58.785 41.667 0.00 0.00 0.00 3.82
3740 6205 4.887071 ACAATGAAACTCCTAACAAGCACA 59.113 37.500 0.00 0.00 0.00 4.57
3741 6206 5.215160 CACAATGAAACTCCTAACAAGCAC 58.785 41.667 0.00 0.00 0.00 4.40
3742 6207 4.887071 ACACAATGAAACTCCTAACAAGCA 59.113 37.500 0.00 0.00 0.00 3.91
3743 6208 5.438761 ACACAATGAAACTCCTAACAAGC 57.561 39.130 0.00 0.00 0.00 4.01
3744 6209 7.264373 AGAACACAATGAAACTCCTAACAAG 57.736 36.000 0.00 0.00 0.00 3.16
3745 6210 7.338196 TGAAGAACACAATGAAACTCCTAACAA 59.662 33.333 0.00 0.00 0.00 2.83
3746 6211 6.826231 TGAAGAACACAATGAAACTCCTAACA 59.174 34.615 0.00 0.00 0.00 2.41
3747 6212 7.259290 TGAAGAACACAATGAAACTCCTAAC 57.741 36.000 0.00 0.00 0.00 2.34
3748 6213 7.556275 ACTTGAAGAACACAATGAAACTCCTAA 59.444 33.333 0.00 0.00 0.00 2.69
3749 6214 7.012327 CACTTGAAGAACACAATGAAACTCCTA 59.988 37.037 0.00 0.00 0.00 2.94
3750 6215 5.888161 ACTTGAAGAACACAATGAAACTCCT 59.112 36.000 0.00 0.00 0.00 3.69
3751 6216 5.973565 CACTTGAAGAACACAATGAAACTCC 59.026 40.000 0.00 0.00 0.00 3.85
3752 6217 6.555315 ACACTTGAAGAACACAATGAAACTC 58.445 36.000 0.00 0.00 0.00 3.01
3753 6218 6.515272 ACACTTGAAGAACACAATGAAACT 57.485 33.333 0.00 0.00 0.00 2.66
3754 6219 6.806249 TCAACACTTGAAGAACACAATGAAAC 59.194 34.615 0.00 0.00 36.59 2.78
3755 6220 6.918626 TCAACACTTGAAGAACACAATGAAA 58.081 32.000 0.00 0.00 36.59 2.69
3756 6221 6.404623 CCTCAACACTTGAAGAACACAATGAA 60.405 38.462 0.00 0.00 39.58 2.57
3757 6222 5.066375 CCTCAACACTTGAAGAACACAATGA 59.934 40.000 0.00 0.00 39.58 2.57
3758 6223 5.276270 CCTCAACACTTGAAGAACACAATG 58.724 41.667 0.00 0.00 39.58 2.82
3759 6224 4.339247 CCCTCAACACTTGAAGAACACAAT 59.661 41.667 0.00 0.00 39.58 2.71
3760 6225 3.694072 CCCTCAACACTTGAAGAACACAA 59.306 43.478 0.00 0.00 39.58 3.33
3761 6226 3.278574 CCCTCAACACTTGAAGAACACA 58.721 45.455 0.00 0.00 39.58 3.72
3762 6227 3.279434 ACCCTCAACACTTGAAGAACAC 58.721 45.455 0.00 0.00 39.58 3.32
3763 6228 3.644966 ACCCTCAACACTTGAAGAACA 57.355 42.857 0.00 0.00 39.58 3.18
3764 6229 3.489229 GCAACCCTCAACACTTGAAGAAC 60.489 47.826 0.00 0.00 39.58 3.01
3765 6230 2.687935 GCAACCCTCAACACTTGAAGAA 59.312 45.455 0.00 0.00 39.58 2.52
3766 6231 2.297701 GCAACCCTCAACACTTGAAGA 58.702 47.619 0.00 0.00 39.58 2.87
3767 6232 1.002468 CGCAACCCTCAACACTTGAAG 60.002 52.381 0.00 0.00 39.58 3.02
3768 6233 1.021202 CGCAACCCTCAACACTTGAA 58.979 50.000 0.00 0.00 39.58 2.69
3769 6234 0.817634 CCGCAACCCTCAACACTTGA 60.818 55.000 0.00 0.00 38.17 3.02
3770 6235 1.101049 ACCGCAACCCTCAACACTTG 61.101 55.000 0.00 0.00 0.00 3.16
3771 6236 0.395173 AACCGCAACCCTCAACACTT 60.395 50.000 0.00 0.00 0.00 3.16
3772 6237 1.101049 CAACCGCAACCCTCAACACT 61.101 55.000 0.00 0.00 0.00 3.55
3773 6238 1.358759 CAACCGCAACCCTCAACAC 59.641 57.895 0.00 0.00 0.00 3.32
3774 6239 0.681564 AACAACCGCAACCCTCAACA 60.682 50.000 0.00 0.00 0.00 3.33
3775 6240 0.248866 CAACAACCGCAACCCTCAAC 60.249 55.000 0.00 0.00 0.00 3.18
3776 6241 0.681564 ACAACAACCGCAACCCTCAA 60.682 50.000 0.00 0.00 0.00 3.02
3777 6242 0.681564 AACAACAACCGCAACCCTCA 60.682 50.000 0.00 0.00 0.00 3.86
3778 6243 0.458260 AAACAACAACCGCAACCCTC 59.542 50.000 0.00 0.00 0.00 4.30
3779 6244 0.174617 CAAACAACAACCGCAACCCT 59.825 50.000 0.00 0.00 0.00 4.34
3780 6245 0.108567 ACAAACAACAACCGCAACCC 60.109 50.000 0.00 0.00 0.00 4.11
3781 6246 1.715993 AACAAACAACAACCGCAACC 58.284 45.000 0.00 0.00 0.00 3.77
3782 6247 4.167268 TCTAAACAAACAACAACCGCAAC 58.833 39.130 0.00 0.00 0.00 4.17
3783 6248 4.416620 CTCTAAACAAACAACAACCGCAA 58.583 39.130 0.00 0.00 0.00 4.85
3784 6249 3.181495 CCTCTAAACAAACAACAACCGCA 60.181 43.478 0.00 0.00 0.00 5.69
3785 6250 3.368495 CCTCTAAACAAACAACAACCGC 58.632 45.455 0.00 0.00 0.00 5.68
3786 6251 3.794138 GCCCTCTAAACAAACAACAACCG 60.794 47.826 0.00 0.00 0.00 4.44
3787 6252 3.383505 AGCCCTCTAAACAAACAACAACC 59.616 43.478 0.00 0.00 0.00 3.77
3788 6253 4.359706 CAGCCCTCTAAACAAACAACAAC 58.640 43.478 0.00 0.00 0.00 3.32
3789 6254 3.181480 GCAGCCCTCTAAACAAACAACAA 60.181 43.478 0.00 0.00 0.00 2.83
3790 6255 2.360801 GCAGCCCTCTAAACAAACAACA 59.639 45.455 0.00 0.00 0.00 3.33
3791 6256 2.623416 AGCAGCCCTCTAAACAAACAAC 59.377 45.455 0.00 0.00 0.00 3.32
3792 6257 2.944129 AGCAGCCCTCTAAACAAACAA 58.056 42.857 0.00 0.00 0.00 2.83
3793 6258 2.656947 AGCAGCCCTCTAAACAAACA 57.343 45.000 0.00 0.00 0.00 2.83
3794 6259 4.616143 GCTTAAGCAGCCCTCTAAACAAAC 60.616 45.833 22.59 0.00 43.65 2.93
3795 6260 3.506067 GCTTAAGCAGCCCTCTAAACAAA 59.494 43.478 22.59 0.00 43.65 2.83
3796 6261 3.081804 GCTTAAGCAGCCCTCTAAACAA 58.918 45.455 22.59 0.00 43.65 2.83
3797 6262 2.711542 GCTTAAGCAGCCCTCTAAACA 58.288 47.619 22.59 0.00 43.65 2.83
3807 6272 0.313987 ACCAAAACCGCTTAAGCAGC 59.686 50.000 26.29 1.11 46.31 5.25
3808 6273 1.336755 ACACCAAAACCGCTTAAGCAG 59.663 47.619 26.29 18.21 42.21 4.24
3809 6274 1.394618 ACACCAAAACCGCTTAAGCA 58.605 45.000 26.29 0.00 42.21 3.91
3810 6275 2.502213 AACACCAAAACCGCTTAAGC 57.498 45.000 17.83 17.83 37.78 3.09
3811 6276 3.067601 AGGAAACACCAAAACCGCTTAAG 59.932 43.478 0.00 0.00 42.04 1.85
3812 6277 3.025262 AGGAAACACCAAAACCGCTTAA 58.975 40.909 0.00 0.00 42.04 1.85
3813 6278 2.657143 AGGAAACACCAAAACCGCTTA 58.343 42.857 0.00 0.00 42.04 3.09
3814 6279 1.480789 AGGAAACACCAAAACCGCTT 58.519 45.000 0.00 0.00 42.04 4.68
3815 6280 2.351706 TAGGAAACACCAAAACCGCT 57.648 45.000 0.00 0.00 42.04 5.52
3816 6281 3.653539 AATAGGAAACACCAAAACCGC 57.346 42.857 0.00 0.00 42.04 5.68
3817 6282 5.233263 CACAAAATAGGAAACACCAAAACCG 59.767 40.000 0.00 0.00 42.04 4.44
3818 6283 6.342111 TCACAAAATAGGAAACACCAAAACC 58.658 36.000 0.00 0.00 42.04 3.27
3819 6284 7.039270 ACTCACAAAATAGGAAACACCAAAAC 58.961 34.615 0.00 0.00 42.04 2.43
3820 6285 7.176589 ACTCACAAAATAGGAAACACCAAAA 57.823 32.000 0.00 0.00 42.04 2.44
3821 6286 6.783708 ACTCACAAAATAGGAAACACCAAA 57.216 33.333 0.00 0.00 42.04 3.28
3822 6287 7.057894 ACTACTCACAAAATAGGAAACACCAA 58.942 34.615 0.00 0.00 42.04 3.67
3823 6288 6.597562 ACTACTCACAAAATAGGAAACACCA 58.402 36.000 0.00 0.00 42.04 4.17
3824 6289 6.148976 GGACTACTCACAAAATAGGAAACACC 59.851 42.308 0.00 0.00 39.35 4.16
3825 6290 6.128634 CGGACTACTCACAAAATAGGAAACAC 60.129 42.308 0.00 0.00 0.00 3.32
3826 6291 5.929992 CGGACTACTCACAAAATAGGAAACA 59.070 40.000 0.00 0.00 0.00 2.83
3827 6292 5.163884 GCGGACTACTCACAAAATAGGAAAC 60.164 44.000 0.00 0.00 0.00 2.78
3828 6293 4.933400 GCGGACTACTCACAAAATAGGAAA 59.067 41.667 0.00 0.00 0.00 3.13
3829 6294 4.020928 TGCGGACTACTCACAAAATAGGAA 60.021 41.667 0.00 0.00 0.00 3.36
3830 6295 3.512329 TGCGGACTACTCACAAAATAGGA 59.488 43.478 0.00 0.00 0.00 2.94
3831 6296 3.857052 TGCGGACTACTCACAAAATAGG 58.143 45.455 0.00 0.00 0.00 2.57
3832 6297 6.250819 CAAATGCGGACTACTCACAAAATAG 58.749 40.000 0.00 0.00 0.00 1.73
3833 6298 5.123186 CCAAATGCGGACTACTCACAAAATA 59.877 40.000 0.00 0.00 0.00 1.40
3834 6299 4.082787 CCAAATGCGGACTACTCACAAAAT 60.083 41.667 0.00 0.00 0.00 1.82
3835 6300 3.252215 CCAAATGCGGACTACTCACAAAA 59.748 43.478 0.00 0.00 0.00 2.44
3836 6301 2.811431 CCAAATGCGGACTACTCACAAA 59.189 45.455 0.00 0.00 0.00 2.83
3837 6302 2.422597 CCAAATGCGGACTACTCACAA 58.577 47.619 0.00 0.00 0.00 3.33
3838 6303 1.338674 CCCAAATGCGGACTACTCACA 60.339 52.381 0.00 0.00 0.00 3.58
3839 6304 1.066430 TCCCAAATGCGGACTACTCAC 60.066 52.381 0.00 0.00 0.00 3.51
3840 6305 1.207089 CTCCCAAATGCGGACTACTCA 59.793 52.381 0.00 0.00 0.00 3.41
3841 6306 1.207329 ACTCCCAAATGCGGACTACTC 59.793 52.381 0.00 0.00 0.00 2.59
3842 6307 1.066143 CACTCCCAAATGCGGACTACT 60.066 52.381 0.00 0.00 0.00 2.57
3843 6308 1.338769 ACACTCCCAAATGCGGACTAC 60.339 52.381 0.00 0.00 0.00 2.73
3844 6309 0.981183 ACACTCCCAAATGCGGACTA 59.019 50.000 0.00 0.00 0.00 2.59
3845 6310 0.981183 TACACTCCCAAATGCGGACT 59.019 50.000 0.00 0.00 0.00 3.85
3846 6311 1.940613 GATACACTCCCAAATGCGGAC 59.059 52.381 0.00 0.00 0.00 4.79
3847 6312 1.472552 CGATACACTCCCAAATGCGGA 60.473 52.381 0.00 0.00 0.00 5.54
3848 6313 0.937304 CGATACACTCCCAAATGCGG 59.063 55.000 0.00 0.00 0.00 5.69
3849 6314 0.937304 CCGATACACTCCCAAATGCG 59.063 55.000 0.00 0.00 0.00 4.73
3850 6315 2.038387 ACCGATACACTCCCAAATGC 57.962 50.000 0.00 0.00 0.00 3.56
3851 6316 5.160641 CAAAAACCGATACACTCCCAAATG 58.839 41.667 0.00 0.00 0.00 2.32
3852 6317 4.321675 GCAAAAACCGATACACTCCCAAAT 60.322 41.667 0.00 0.00 0.00 2.32
3853 6318 3.004944 GCAAAAACCGATACACTCCCAAA 59.995 43.478 0.00 0.00 0.00 3.28
3854 6319 2.554893 GCAAAAACCGATACACTCCCAA 59.445 45.455 0.00 0.00 0.00 4.12
3855 6320 2.156098 GCAAAAACCGATACACTCCCA 58.844 47.619 0.00 0.00 0.00 4.37
3856 6321 1.471287 GGCAAAAACCGATACACTCCC 59.529 52.381 0.00 0.00 0.00 4.30
3857 6322 2.161609 CAGGCAAAAACCGATACACTCC 59.838 50.000 0.00 0.00 33.69 3.85
3858 6323 2.161609 CCAGGCAAAAACCGATACACTC 59.838 50.000 0.00 0.00 33.69 3.51
3859 6324 2.159382 CCAGGCAAAAACCGATACACT 58.841 47.619 0.00 0.00 33.69 3.55
3860 6325 1.883926 ACCAGGCAAAAACCGATACAC 59.116 47.619 0.00 0.00 33.69 2.90
3861 6326 2.279935 ACCAGGCAAAAACCGATACA 57.720 45.000 0.00 0.00 33.69 2.29
3862 6327 3.653539 AAACCAGGCAAAAACCGATAC 57.346 42.857 0.00 0.00 33.69 2.24
3863 6328 4.623002 GAAAAACCAGGCAAAAACCGATA 58.377 39.130 0.00 0.00 33.69 2.92
3864 6329 3.462982 GAAAAACCAGGCAAAAACCGAT 58.537 40.909 0.00 0.00 33.69 4.18
3865 6330 2.735762 CGAAAAACCAGGCAAAAACCGA 60.736 45.455 0.00 0.00 33.69 4.69
3866 6331 1.590698 CGAAAAACCAGGCAAAAACCG 59.409 47.619 0.00 0.00 33.69 4.44
3867 6332 2.623535 ACGAAAAACCAGGCAAAAACC 58.376 42.857 0.00 0.00 0.00 3.27
3868 6333 5.781452 TTTACGAAAAACCAGGCAAAAAC 57.219 34.783 0.00 0.00 0.00 2.43
3869 6334 6.986904 AATTTACGAAAAACCAGGCAAAAA 57.013 29.167 0.00 0.00 0.00 1.94
3870 6335 8.664211 ATTAATTTACGAAAAACCAGGCAAAA 57.336 26.923 0.00 0.00 0.00 2.44
3871 6336 8.664211 AATTAATTTACGAAAAACCAGGCAAA 57.336 26.923 0.00 0.00 0.00 3.68
3872 6337 9.413048 CTAATTAATTTACGAAAAACCAGGCAA 57.587 29.630 5.91 0.00 0.00 4.52
3873 6338 8.794553 TCTAATTAATTTACGAAAAACCAGGCA 58.205 29.630 5.91 0.00 0.00 4.75
3874 6339 9.069078 GTCTAATTAATTTACGAAAAACCAGGC 57.931 33.333 5.91 0.00 0.00 4.85
3905 6370 9.278734 GCCTCGTTGATTAATTAAGAAGAAAAG 57.721 33.333 3.94 0.00 0.00 2.27
3906 6371 8.788806 TGCCTCGTTGATTAATTAAGAAGAAAA 58.211 29.630 3.94 0.00 0.00 2.29
3907 6372 8.330466 TGCCTCGTTGATTAATTAAGAAGAAA 57.670 30.769 3.94 0.00 0.00 2.52
3908 6373 7.915293 TGCCTCGTTGATTAATTAAGAAGAA 57.085 32.000 3.94 0.00 0.00 2.52
3909 6374 7.915293 TTGCCTCGTTGATTAATTAAGAAGA 57.085 32.000 3.94 0.57 0.00 2.87
3931 6396 6.683090 TCGAAACGAAGGCAAAAATATTTG 57.317 33.333 0.39 0.00 40.00 2.32
3932 6397 7.701809 TTTCGAAACGAAGGCAAAAATATTT 57.298 28.000 6.47 0.00 46.43 1.40
3933 6398 7.701809 TTTTCGAAACGAAGGCAAAAATATT 57.298 28.000 10.79 0.00 46.43 1.28
3934 6399 7.701809 TTTTTCGAAACGAAGGCAAAAATAT 57.298 28.000 10.79 0.00 46.43 1.28
3955 6420 6.631238 CGTTCTCGTACACAATGAACATTTTT 59.369 34.615 0.00 0.00 37.46 1.94
3956 6421 6.133392 CGTTCTCGTACACAATGAACATTTT 58.867 36.000 0.00 0.00 37.46 1.82
3957 6422 5.333798 CCGTTCTCGTACACAATGAACATTT 60.334 40.000 0.00 0.00 37.46 2.32
3958 6423 4.151689 CCGTTCTCGTACACAATGAACATT 59.848 41.667 0.00 0.00 37.46 2.71
3959 6424 3.678072 CCGTTCTCGTACACAATGAACAT 59.322 43.478 0.00 0.00 37.46 2.71
3960 6425 3.054166 CCGTTCTCGTACACAATGAACA 58.946 45.455 0.00 0.00 37.46 3.18
3961 6426 2.410730 CCCGTTCTCGTACACAATGAAC 59.589 50.000 0.00 0.00 35.17 3.18
3962 6427 2.679450 CCCGTTCTCGTACACAATGAA 58.321 47.619 0.00 0.00 35.01 2.57
3963 6428 1.670674 GCCCGTTCTCGTACACAATGA 60.671 52.381 0.00 0.00 35.01 2.57
3964 6429 0.719465 GCCCGTTCTCGTACACAATG 59.281 55.000 0.00 0.00 35.01 2.82
3965 6430 0.606604 AGCCCGTTCTCGTACACAAT 59.393 50.000 0.00 0.00 35.01 2.71
3966 6431 0.390124 AAGCCCGTTCTCGTACACAA 59.610 50.000 0.00 0.00 35.01 3.33
3967 6432 1.246649 TAAGCCCGTTCTCGTACACA 58.753 50.000 0.00 0.00 35.01 3.72
3968 6433 1.988467 GTTAAGCCCGTTCTCGTACAC 59.012 52.381 0.00 0.00 35.01 2.90
3969 6434 1.067635 GGTTAAGCCCGTTCTCGTACA 60.068 52.381 0.00 0.00 35.01 2.90
3991 6456 2.224159 ACCATCCACGCTCTTGGGT 61.224 57.895 0.00 0.00 40.11 4.51
3992 6457 1.746615 CACCATCCACGCTCTTGGG 60.747 63.158 0.00 0.00 37.24 4.12
3993 6458 0.321564 TTCACCATCCACGCTCTTGG 60.322 55.000 0.00 0.00 38.10 3.61
3999 6464 1.576356 GAGATCTTCACCATCCACGC 58.424 55.000 0.00 0.00 0.00 5.34
4003 6468 0.598680 CGGCGAGATCTTCACCATCC 60.599 60.000 0.00 0.00 0.00 3.51
4021 6487 3.425404 CTTTCTCTCTCTTTCTCTCGCG 58.575 50.000 0.00 0.00 0.00 5.87
4022 6488 3.119495 AGCTTTCTCTCTCTTTCTCTCGC 60.119 47.826 0.00 0.00 0.00 5.03
4023 6489 4.701956 AGCTTTCTCTCTCTTTCTCTCG 57.298 45.455 0.00 0.00 0.00 4.04
4024 6490 6.405842 CCCTTAGCTTTCTCTCTCTTTCTCTC 60.406 46.154 0.00 0.00 0.00 3.20
4025 6491 5.422012 CCCTTAGCTTTCTCTCTCTTTCTCT 59.578 44.000 0.00 0.00 0.00 3.10
4026 6492 5.420739 TCCCTTAGCTTTCTCTCTCTTTCTC 59.579 44.000 0.00 0.00 0.00 2.87
4027 6493 5.337788 TCCCTTAGCTTTCTCTCTCTTTCT 58.662 41.667 0.00 0.00 0.00 2.52
4028 6494 5.669164 TCCCTTAGCTTTCTCTCTCTTTC 57.331 43.478 0.00 0.00 0.00 2.62
4030 6496 6.441088 TTTTCCCTTAGCTTTCTCTCTCTT 57.559 37.500 0.00 0.00 0.00 2.85
4055 6521 0.749454 GCGAGATGGGATGCACCTTT 60.749 55.000 0.00 0.00 38.98 3.11
4056 6522 1.153086 GCGAGATGGGATGCACCTT 60.153 57.895 0.00 0.00 38.98 3.50
4057 6523 2.507944 GCGAGATGGGATGCACCT 59.492 61.111 0.00 0.00 38.98 4.00
4058 6524 2.592861 GGCGAGATGGGATGCACC 60.593 66.667 0.00 0.00 38.08 5.01
4059 6525 1.596477 GAGGCGAGATGGGATGCAC 60.596 63.158 0.00 0.00 0.00 4.57
4060 6526 2.824546 GAGGCGAGATGGGATGCA 59.175 61.111 0.00 0.00 0.00 3.96
4061 6527 2.356793 CGAGGCGAGATGGGATGC 60.357 66.667 0.00 0.00 0.00 3.91
4062 6528 0.673985 TAACGAGGCGAGATGGGATG 59.326 55.000 0.00 0.00 0.00 3.51
4063 6529 1.068741 GTTAACGAGGCGAGATGGGAT 59.931 52.381 0.00 0.00 0.00 3.85
4064 6530 0.458669 GTTAACGAGGCGAGATGGGA 59.541 55.000 0.00 0.00 0.00 4.37
4065 6531 0.460311 AGTTAACGAGGCGAGATGGG 59.540 55.000 0.00 0.00 0.00 4.00
4066 6532 1.927174 CAAGTTAACGAGGCGAGATGG 59.073 52.381 0.00 0.00 0.00 3.51
4068 6534 1.641577 GCAAGTTAACGAGGCGAGAT 58.358 50.000 0.00 0.00 0.00 2.75
4069 6535 3.117589 GCAAGTTAACGAGGCGAGA 57.882 52.632 0.00 0.00 0.00 4.04
4106 6572 0.108186 TCGGTAGTGGCATGCTCTTG 60.108 55.000 18.92 9.78 0.00 3.02
4215 6700 1.706287 GAGCAGGCGGAAATTCGGAC 61.706 60.000 4.67 1.13 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.