Multiple sequence alignment - TraesCS3B01G215400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G215400 chr3B 100.000 4477 0 0 1 4477 256360916 256356440 0.000000e+00 8268.0
1 TraesCS3B01G215400 chr3B 97.131 488 14 0 1 488 2342624 2343111 0.000000e+00 824.0
2 TraesCS3B01G215400 chr3B 95.446 505 21 2 1 504 264010936 264010433 0.000000e+00 804.0
3 TraesCS3B01G215400 chr3A 92.394 2143 77 26 593 2679 218120659 218118547 0.000000e+00 2976.0
4 TraesCS3B01G215400 chr3A 93.154 1227 39 28 2728 3949 218118544 218117358 0.000000e+00 1759.0
5 TraesCS3B01G215400 chr3D 93.093 1665 63 20 526 2164 177486240 177484602 0.000000e+00 2390.0
6 TraesCS3B01G215400 chr3D 95.524 1050 35 8 2696 3741 177483821 177482780 0.000000e+00 1668.0
7 TraesCS3B01G215400 chr3D 88.912 478 17 6 2157 2628 177484443 177483996 1.410000e-154 556.0
8 TraesCS3B01G215400 chr3D 83.069 378 34 10 3810 4160 177482281 177481907 2.600000e-82 316.0
9 TraesCS3B01G215400 chr3D 98.000 100 2 0 3712 3811 177482839 177482740 1.660000e-39 174.0
10 TraesCS3B01G215400 chr3D 94.286 105 5 1 592 695 177487106 177487002 4.640000e-35 159.0
11 TraesCS3B01G215400 chr5B 96.888 482 15 0 1 482 65534521 65534040 0.000000e+00 808.0
12 TraesCS3B01G215400 chr5B 95.400 500 23 0 1 500 681661671 681661172 0.000000e+00 797.0
13 TraesCS3B01G215400 chr2B 96.327 490 18 0 1 490 702803822 702804311 0.000000e+00 806.0
14 TraesCS3B01G215400 chr2B 95.219 502 24 0 1 502 232452183 232451682 0.000000e+00 795.0
15 TraesCS3B01G215400 chr2B 88.095 84 8 1 3947 4028 676589113 676589030 1.020000e-16 99.0
16 TraesCS3B01G215400 chr1B 95.446 505 22 1 1 504 629923033 629922529 0.000000e+00 804.0
17 TraesCS3B01G215400 chr1B 95.591 499 22 0 1 499 41703137 41702639 0.000000e+00 800.0
18 TraesCS3B01G215400 chr1B 94.472 199 9 1 4162 4360 80970281 80970477 5.630000e-79 305.0
19 TraesCS3B01G215400 chr1B 97.059 68 2 0 4184 4251 80970210 80970277 1.020000e-21 115.0
20 TraesCS3B01G215400 chr1B 85.366 82 9 1 3947 4028 531203102 531203024 1.030000e-11 82.4
21 TraesCS3B01G215400 chr7D 95.618 502 17 4 4 504 34674952 34675449 0.000000e+00 800.0
22 TraesCS3B01G215400 chr7D 86.957 69 6 1 3947 4015 506679527 506679462 1.730000e-09 75.0
23 TraesCS3B01G215400 chr6D 93.478 230 11 2 4159 4388 406653594 406653819 5.550000e-89 339.0
24 TraesCS3B01G215400 chr6D 93.038 158 10 1 1919 2075 153863852 153863695 3.480000e-56 230.0
25 TraesCS3B01G215400 chr7B 93.103 232 12 3 4159 4388 507790052 507789823 2.000000e-88 337.0
26 TraesCS3B01G215400 chr1A 91.810 232 8 5 4159 4388 20166885 20167107 3.360000e-81 313.0
27 TraesCS3B01G215400 chr4A 91.346 208 13 3 4159 4365 432266543 432266746 3.410000e-71 279.0
28 TraesCS3B01G215400 chr6B 91.772 158 11 2 1919 2075 277622764 277622608 7.540000e-53 219.0
29 TraesCS3B01G215400 chr6A 91.139 158 13 1 1919 2075 206350676 206350519 3.510000e-51 213.0
30 TraesCS3B01G215400 chr2D 91.549 71 6 0 4042 4112 564921759 564921689 1.020000e-16 99.0
31 TraesCS3B01G215400 chr2D 82.500 80 10 2 3950 4028 395597194 395597118 2.890000e-07 67.6
32 TraesCS3B01G215400 chr4B 87.805 82 6 1 3947 4028 544445370 544445293 4.770000e-15 93.5
33 TraesCS3B01G215400 chr7A 88.000 75 6 2 3947 4020 557893288 557893216 7.980000e-13 86.1
34 TraesCS3B01G215400 chr7A 87.500 72 9 0 4042 4113 398277501 398277430 2.870000e-12 84.2
35 TraesCS3B01G215400 chr7A 85.135 74 11 0 4042 4115 92798262 92798189 4.800000e-10 76.8
36 TraesCS3B01G215400 chr4D 85.366 82 11 1 3947 4028 14609692 14609612 2.870000e-12 84.2
37 TraesCS3B01G215400 chr5A 85.714 77 5 2 3947 4017 151732682 151732758 4.800000e-10 76.8
38 TraesCS3B01G215400 chr2A 84.932 73 7 1 3947 4015 761415483 761415555 2.230000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G215400 chr3B 256356440 256360916 4476 True 8268.000000 8268 100.000000 1 4477 1 chr3B.!!$R1 4476
1 TraesCS3B01G215400 chr3B 264010433 264010936 503 True 804.000000 804 95.446000 1 504 1 chr3B.!!$R2 503
2 TraesCS3B01G215400 chr3A 218117358 218120659 3301 True 2367.500000 2976 92.774000 593 3949 2 chr3A.!!$R1 3356
3 TraesCS3B01G215400 chr3D 177481907 177487106 5199 True 877.166667 2390 92.147333 526 4160 6 chr3D.!!$R1 3634
4 TraesCS3B01G215400 chr2B 232451682 232452183 501 True 795.000000 795 95.219000 1 502 1 chr2B.!!$R1 501
5 TraesCS3B01G215400 chr1B 629922529 629923033 504 True 804.000000 804 95.446000 1 504 1 chr1B.!!$R3 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
510 512 0.036732 AGGAAAACGATCTGCAGGCA 59.963 50.0 15.13 0.0 0.0 4.75 F
557 559 0.237235 GGTTGACGCGCATTGAAAGA 59.763 50.0 5.73 0.0 0.0 2.52 F
1821 2754 0.047176 TGGGGTTGGGGGATGATAGT 59.953 55.0 0.00 0.0 0.0 2.12 F
2595 3741 0.249447 CTATCTCGGCATGAACGGCA 60.249 55.0 0.00 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1332 2260 0.323302 ACCACACACACACACAGACA 59.677 50.0 0.0 0.0 0.00 3.41 R
1837 2770 0.325933 AGAGCAGCAGGTATTGTGCA 59.674 50.0 0.0 0.0 43.82 4.57 R
3222 4533 1.484038 AACAAACCTCAGCCTTTGCA 58.516 45.0 0.0 0.0 41.13 4.08 R
4408 6259 0.044855 ATAGAGGGGAAGGTGCCTGT 59.955 55.0 0.0 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
237 238 2.280404 TAGGACCGATGGCCTCGTCT 62.280 60.000 18.94 15.44 46.18 4.18
317 318 6.993902 AGACGATGAACAACCTAAAAACCTAA 59.006 34.615 0.00 0.00 0.00 2.69
441 443 3.332393 AAGATCGGCCTCCCCCTGA 62.332 63.158 0.00 0.00 0.00 3.86
457 459 4.867599 GACGGCGGCTAGGGTTCG 62.868 72.222 13.24 0.00 0.00 3.95
504 506 2.531206 GGACGAGAGGAAAACGATCTG 58.469 52.381 0.00 0.00 0.00 2.90
505 507 1.921230 GACGAGAGGAAAACGATCTGC 59.079 52.381 0.00 0.00 0.00 4.26
506 508 1.272490 ACGAGAGGAAAACGATCTGCA 59.728 47.619 0.00 0.00 0.00 4.41
507 509 1.923204 CGAGAGGAAAACGATCTGCAG 59.077 52.381 7.63 7.63 0.00 4.41
508 510 2.275318 GAGAGGAAAACGATCTGCAGG 58.725 52.381 15.13 0.00 0.00 4.85
509 511 0.729690 GAGGAAAACGATCTGCAGGC 59.270 55.000 15.13 5.63 0.00 4.85
510 512 0.036732 AGGAAAACGATCTGCAGGCA 59.963 50.000 15.13 0.00 0.00 4.75
511 513 0.449388 GGAAAACGATCTGCAGGCAG 59.551 55.000 15.13 14.97 44.86 4.85
518 520 4.415783 TCTGCAGGCAGAGTCGTA 57.584 55.556 19.37 0.00 46.80 3.43
519 521 2.887790 TCTGCAGGCAGAGTCGTAT 58.112 52.632 19.37 0.00 46.80 3.06
520 522 0.741326 TCTGCAGGCAGAGTCGTATC 59.259 55.000 19.37 0.00 46.80 2.24
521 523 0.249238 CTGCAGGCAGAGTCGTATCC 60.249 60.000 16.02 0.00 46.30 2.59
522 524 1.299468 GCAGGCAGAGTCGTATCCG 60.299 63.158 0.00 0.00 0.00 4.18
523 525 1.360551 CAGGCAGAGTCGTATCCGG 59.639 63.158 0.00 0.00 33.95 5.14
524 526 1.076923 AGGCAGAGTCGTATCCGGT 60.077 57.895 0.00 0.00 33.95 5.28
525 527 1.102222 AGGCAGAGTCGTATCCGGTC 61.102 60.000 0.00 0.00 33.95 4.79
526 528 1.009900 GCAGAGTCGTATCCGGTCG 60.010 63.158 0.00 5.71 33.95 4.79
527 529 1.009900 CAGAGTCGTATCCGGTCGC 60.010 63.158 0.00 2.59 33.95 5.19
528 530 2.185494 AGAGTCGTATCCGGTCGCC 61.185 63.158 0.00 0.00 33.95 5.54
529 531 3.191637 GAGTCGTATCCGGTCGCCC 62.192 68.421 0.00 0.30 33.95 6.13
530 532 3.520862 GTCGTATCCGGTCGCCCA 61.521 66.667 0.00 0.00 33.95 5.36
531 533 3.520862 TCGTATCCGGTCGCCCAC 61.521 66.667 0.00 0.00 33.95 4.61
532 534 4.918129 CGTATCCGGTCGCCCACG 62.918 72.222 0.00 0.00 42.01 4.94
554 556 2.553770 CGGTTGACGCGCATTGAA 59.446 55.556 5.73 0.00 34.82 2.69
555 557 1.082431 CGGTTGACGCGCATTGAAA 60.082 52.632 5.73 0.00 34.82 2.69
556 558 1.059657 CGGTTGACGCGCATTGAAAG 61.060 55.000 5.73 0.00 34.82 2.62
557 559 0.237235 GGTTGACGCGCATTGAAAGA 59.763 50.000 5.73 0.00 0.00 2.52
558 560 1.135689 GGTTGACGCGCATTGAAAGAT 60.136 47.619 5.73 0.00 0.00 2.40
559 561 2.169179 GTTGACGCGCATTGAAAGATC 58.831 47.619 5.73 0.00 0.00 2.75
560 562 1.437625 TGACGCGCATTGAAAGATCA 58.562 45.000 5.73 0.00 0.00 2.92
561 563 1.394572 TGACGCGCATTGAAAGATCAG 59.605 47.619 5.73 0.00 36.78 2.90
562 564 0.729116 ACGCGCATTGAAAGATCAGG 59.271 50.000 5.73 0.00 36.78 3.86
563 565 0.590732 CGCGCATTGAAAGATCAGGC 60.591 55.000 8.75 0.00 36.78 4.85
564 566 3.521534 CGCATTGAAAGATCAGGCG 57.478 52.632 10.84 10.84 46.83 5.52
566 568 2.752144 GCATTGAAAGATCAGGCGAG 57.248 50.000 0.00 0.00 36.78 5.03
567 569 2.012673 GCATTGAAAGATCAGGCGAGT 58.987 47.619 0.00 0.00 36.78 4.18
568 570 2.223203 GCATTGAAAGATCAGGCGAGTG 60.223 50.000 0.00 0.00 36.78 3.51
569 571 3.264947 CATTGAAAGATCAGGCGAGTGA 58.735 45.455 0.00 0.00 36.78 3.41
570 572 3.401033 TTGAAAGATCAGGCGAGTGAA 57.599 42.857 0.00 0.00 36.78 3.18
571 573 3.616956 TGAAAGATCAGGCGAGTGAAT 57.383 42.857 0.00 0.00 0.00 2.57
572 574 4.736126 TGAAAGATCAGGCGAGTGAATA 57.264 40.909 0.00 0.00 0.00 1.75
573 575 4.433615 TGAAAGATCAGGCGAGTGAATAC 58.566 43.478 0.00 0.00 0.00 1.89
574 576 4.081697 TGAAAGATCAGGCGAGTGAATACA 60.082 41.667 0.00 0.00 0.00 2.29
575 577 4.679373 AAGATCAGGCGAGTGAATACAT 57.321 40.909 0.00 0.00 0.00 2.29
576 578 5.791336 AAGATCAGGCGAGTGAATACATA 57.209 39.130 0.00 0.00 0.00 2.29
577 579 5.127693 AGATCAGGCGAGTGAATACATAC 57.872 43.478 0.00 0.00 0.00 2.39
578 580 3.349488 TCAGGCGAGTGAATACATACG 57.651 47.619 0.00 0.00 0.00 3.06
579 581 2.686405 TCAGGCGAGTGAATACATACGT 59.314 45.455 0.00 0.00 33.16 3.57
580 582 3.129813 TCAGGCGAGTGAATACATACGTT 59.870 43.478 0.00 0.00 33.16 3.99
581 583 3.863424 CAGGCGAGTGAATACATACGTTT 59.137 43.478 0.00 0.00 33.16 3.60
582 584 4.026804 CAGGCGAGTGAATACATACGTTTC 60.027 45.833 0.00 0.00 33.16 2.78
583 585 3.244579 GGCGAGTGAATACATACGTTTCC 59.755 47.826 0.00 0.00 33.16 3.13
584 586 3.244579 GCGAGTGAATACATACGTTTCCC 59.755 47.826 0.00 0.00 33.16 3.97
585 587 4.426416 CGAGTGAATACATACGTTTCCCA 58.574 43.478 0.00 0.00 0.00 4.37
586 588 5.047847 CGAGTGAATACATACGTTTCCCAT 58.952 41.667 0.00 0.00 0.00 4.00
587 589 6.210796 CGAGTGAATACATACGTTTCCCATA 58.789 40.000 0.00 0.00 0.00 2.74
588 590 6.143438 CGAGTGAATACATACGTTTCCCATAC 59.857 42.308 0.00 0.00 0.00 2.39
589 591 5.981315 AGTGAATACATACGTTTCCCATACG 59.019 40.000 0.00 0.00 44.20 3.06
590 592 5.176223 GTGAATACATACGTTTCCCATACGG 59.824 44.000 0.00 0.00 42.99 4.02
591 593 1.944032 ACATACGTTTCCCATACGGC 58.056 50.000 0.00 0.00 42.99 5.68
596 598 1.418637 ACGTTTCCCATACGGCCATAT 59.581 47.619 2.24 0.00 42.99 1.78
733 1661 7.011189 CAGCAAAAGCAATTTTAATTCCTTCG 58.989 34.615 0.00 0.00 26.71 3.79
799 1727 4.082523 GTGCCTAGCCTCCACGCA 62.083 66.667 0.00 0.00 0.00 5.24
922 1850 1.005228 TCCTTCTCCCTTCCTCGGTA 58.995 55.000 0.00 0.00 0.00 4.02
959 1887 3.105782 ACGCACACGCAGTCATCG 61.106 61.111 0.00 0.00 41.61 3.84
1145 2073 2.970639 CAAGAGCGAGAACCCCGA 59.029 61.111 0.00 0.00 0.00 5.14
1236 2164 3.119637 TGACGCGATTTGACTACTCATCA 60.120 43.478 15.93 0.00 0.00 3.07
1327 2255 6.860790 TTGGGTACTGATATGTGAGTTGTA 57.139 37.500 0.00 0.00 0.00 2.41
1332 2260 7.265673 GGTACTGATATGTGAGTTGTATGTGT 58.734 38.462 0.00 0.00 0.00 3.72
1333 2261 7.222805 GGTACTGATATGTGAGTTGTATGTGTG 59.777 40.741 0.00 0.00 0.00 3.82
1334 2262 6.701340 ACTGATATGTGAGTTGTATGTGTGT 58.299 36.000 0.00 0.00 0.00 3.72
1335 2263 6.813649 ACTGATATGTGAGTTGTATGTGTGTC 59.186 38.462 0.00 0.00 0.00 3.67
1336 2264 6.935167 TGATATGTGAGTTGTATGTGTGTCT 58.065 36.000 0.00 0.00 0.00 3.41
1337 2265 6.813152 TGATATGTGAGTTGTATGTGTGTCTG 59.187 38.462 0.00 0.00 0.00 3.51
1338 2266 4.400529 TGTGAGTTGTATGTGTGTCTGT 57.599 40.909 0.00 0.00 0.00 3.41
1339 2267 4.119136 TGTGAGTTGTATGTGTGTCTGTG 58.881 43.478 0.00 0.00 0.00 3.66
1340 2268 4.119862 GTGAGTTGTATGTGTGTCTGTGT 58.880 43.478 0.00 0.00 0.00 3.72
1341 2269 4.025730 GTGAGTTGTATGTGTGTCTGTGTG 60.026 45.833 0.00 0.00 0.00 3.82
1382 2310 2.126071 GCGCTGCTGGAGTTCGTA 60.126 61.111 0.00 0.00 0.00 3.43
1641 2569 2.119457 GCTTGCTGTTGCTTGTGTTAC 58.881 47.619 0.00 0.00 40.48 2.50
1748 2681 1.674651 GCCCTCCTTCCGAACAACC 60.675 63.158 0.00 0.00 0.00 3.77
1758 2691 3.048337 TCCGAACAACCTGTGTATTCC 57.952 47.619 0.00 0.00 40.60 3.01
1768 2701 2.571653 CCTGTGTATTCCTTCAGGTGGA 59.428 50.000 0.00 0.00 41.51 4.02
1771 2704 4.588899 TGTGTATTCCTTCAGGTGGATTG 58.411 43.478 0.00 0.00 36.34 2.67
1783 2716 6.914654 TCAGGTGGATTGATTCAAAATCAA 57.085 33.333 15.28 15.28 41.59 2.57
1789 2722 7.201461 GGTGGATTGATTCAAAATCAATGTTCG 60.201 37.037 24.92 0.00 45.59 3.95
1801 2734 4.220693 TCAATGTTCGAGATCACCCAAT 57.779 40.909 0.00 0.00 0.00 3.16
1821 2754 0.047176 TGGGGTTGGGGGATGATAGT 59.953 55.000 0.00 0.00 0.00 2.12
2133 3105 6.365518 GGAGTTAGTTAGACGGCTATAATTGC 59.634 42.308 0.00 0.00 0.00 3.56
2177 3315 1.411246 TGTGGTCTACGAAGTGCTGTT 59.589 47.619 0.00 0.00 45.73 3.16
2248 3387 2.548875 GTTCAAATGCAGGCACACAAA 58.451 42.857 0.00 0.00 0.00 2.83
2263 3402 8.986847 CAGGCACACAAATTGTTATTTTCATAA 58.013 29.630 0.00 0.00 35.67 1.90
2341 3480 9.900710 GAGTATGTAGTAGTTTGACTATCATGG 57.099 37.037 0.00 0.00 34.50 3.66
2355 3494 4.589374 ACTATCATGGTCAGGTTAGGTAGC 59.411 45.833 0.00 0.00 0.00 3.58
2362 3502 3.243334 GGTCAGGTTAGGTAGCGTATGTC 60.243 52.174 0.00 0.00 0.00 3.06
2375 3515 1.469079 CGTATGTCCACATCAGCACGA 60.469 52.381 6.83 0.00 36.98 4.35
2376 3516 2.616960 GTATGTCCACATCAGCACGAA 58.383 47.619 0.00 0.00 37.76 3.85
2475 3615 2.488153 GTTTGTAGTTCACCCCAGCATC 59.512 50.000 0.00 0.00 0.00 3.91
2499 3639 8.160521 TCGAAACAATGTTCCTAATTTCAGAA 57.839 30.769 0.00 0.00 0.00 3.02
2588 3734 1.328680 GTTGCACACTATCTCGGCATG 59.671 52.381 0.00 0.00 34.03 4.06
2589 3735 0.823460 TGCACACTATCTCGGCATGA 59.177 50.000 0.00 0.00 0.00 3.07
2590 3736 1.206849 TGCACACTATCTCGGCATGAA 59.793 47.619 0.00 0.00 0.00 2.57
2591 3737 1.594862 GCACACTATCTCGGCATGAAC 59.405 52.381 0.00 0.00 0.00 3.18
2592 3738 1.854743 CACACTATCTCGGCATGAACG 59.145 52.381 0.00 0.00 0.00 3.95
2593 3739 1.202417 ACACTATCTCGGCATGAACGG 60.202 52.381 0.00 0.00 0.00 4.44
2594 3740 0.249489 ACTATCTCGGCATGAACGGC 60.249 55.000 0.00 0.00 0.00 5.68
2595 3741 0.249447 CTATCTCGGCATGAACGGCA 60.249 55.000 0.00 0.00 0.00 5.69
2596 3742 0.392706 TATCTCGGCATGAACGGCAT 59.607 50.000 0.00 0.00 37.85 4.40
2644 3951 5.662208 TGTTACATTCTCCCTATTTCCCGTA 59.338 40.000 0.00 0.00 0.00 4.02
2658 3965 9.210228 CCTATTTCCCGTATCCCTATATAGTTT 57.790 37.037 8.92 0.00 0.00 2.66
2685 3992 9.490379 AAGAACAATAAGAAAAGTATGAGACGT 57.510 29.630 0.00 0.00 0.00 4.34
2779 4087 7.875971 AGTGTTATTGAGAAAAGACATGTTCC 58.124 34.615 0.00 0.00 0.00 3.62
2787 4095 6.260050 TGAGAAAAGACATGTTCCAACTGTAC 59.740 38.462 0.00 0.00 0.00 2.90
2886 4194 3.132646 TGGCATGTTCACTTTTTCTGCTT 59.867 39.130 0.00 0.00 0.00 3.91
3018 4326 7.958053 ACTTGTGTTACATGTTAGGTCTTAC 57.042 36.000 2.30 0.00 33.38 2.34
3019 4327 7.732996 ACTTGTGTTACATGTTAGGTCTTACT 58.267 34.615 2.30 0.00 33.38 2.24
3020 4328 8.863086 ACTTGTGTTACATGTTAGGTCTTACTA 58.137 33.333 2.30 0.00 33.38 1.82
3021 4329 9.136952 CTTGTGTTACATGTTAGGTCTTACTAC 57.863 37.037 2.30 0.00 0.00 2.73
3062 4373 9.745880 CGTAATATGGTCTTATCAAGTACTTGT 57.254 33.333 29.83 20.76 41.16 3.16
3075 4386 8.902540 ATCAAGTACTTGTTGTATTGAACTCA 57.097 30.769 29.83 10.25 41.16 3.41
3091 4402 4.959210 TGAACTCAAAACCAATTTCAGGGA 59.041 37.500 0.00 0.00 0.00 4.20
3222 4533 4.868450 TGAACTTGTTGAAATCGTTCGT 57.132 36.364 0.00 0.00 37.40 3.85
3255 4566 9.040939 GCTGAGGTTTGTTTTATGTAATTGTTT 57.959 29.630 0.00 0.00 0.00 2.83
3275 4586 9.971922 ATTGTTTTTCTACTTCAATTCTCCTTG 57.028 29.630 0.00 0.00 0.00 3.61
3278 4589 8.621286 GTTTTTCTACTTCAATTCTCCTTGACA 58.379 33.333 0.00 0.00 34.96 3.58
3341 4652 0.600255 AGGTGGTTGAAGACTTCGCG 60.600 55.000 10.56 0.00 0.00 5.87
3579 4893 2.637025 CACCGGCGGTTGTTGAAG 59.363 61.111 32.12 12.88 31.02 3.02
3600 4914 2.609459 GGAAGCACGATGGAACTATGTG 59.391 50.000 0.00 0.00 0.00 3.21
3711 5027 4.957296 ACACTGTCAATTTCGGTTACTCT 58.043 39.130 0.00 0.00 0.00 3.24
3712 5028 4.750098 ACACTGTCAATTTCGGTTACTCTG 59.250 41.667 0.00 0.00 0.00 3.35
3713 5029 3.746492 ACTGTCAATTTCGGTTACTCTGC 59.254 43.478 0.00 0.00 0.00 4.26
3714 5030 3.734463 TGTCAATTTCGGTTACTCTGCA 58.266 40.909 0.00 0.00 0.00 4.41
3715 5031 4.130857 TGTCAATTTCGGTTACTCTGCAA 58.869 39.130 0.00 0.00 0.00 4.08
3716 5032 4.759693 TGTCAATTTCGGTTACTCTGCAAT 59.240 37.500 0.00 0.00 0.00 3.56
3717 5033 5.935206 TGTCAATTTCGGTTACTCTGCAATA 59.065 36.000 0.00 0.00 0.00 1.90
3718 5034 6.597672 TGTCAATTTCGGTTACTCTGCAATAT 59.402 34.615 0.00 0.00 0.00 1.28
3719 5035 7.766738 TGTCAATTTCGGTTACTCTGCAATATA 59.233 33.333 0.00 0.00 0.00 0.86
3720 5036 8.062448 GTCAATTTCGGTTACTCTGCAATATAC 58.938 37.037 0.00 0.00 0.00 1.47
3721 5037 7.766738 TCAATTTCGGTTACTCTGCAATATACA 59.233 33.333 0.00 0.00 0.00 2.29
3722 5038 6.897259 TTTCGGTTACTCTGCAATATACAC 57.103 37.500 0.00 0.00 0.00 2.90
3723 5039 5.847111 TCGGTTACTCTGCAATATACACT 57.153 39.130 0.00 0.00 0.00 3.55
3724 5040 5.588240 TCGGTTACTCTGCAATATACACTG 58.412 41.667 0.00 0.00 0.00 3.66
3725 5041 5.126545 TCGGTTACTCTGCAATATACACTGT 59.873 40.000 0.00 0.00 0.00 3.55
3726 5042 5.459107 CGGTTACTCTGCAATATACACTGTC 59.541 44.000 0.00 0.00 0.00 3.51
3727 5043 6.338146 GGTTACTCTGCAATATACACTGTCA 58.662 40.000 0.00 0.00 0.00 3.58
3728 5044 6.816640 GGTTACTCTGCAATATACACTGTCAA 59.183 38.462 0.00 0.00 0.00 3.18
3729 5045 7.495934 GGTTACTCTGCAATATACACTGTCAAT 59.504 37.037 0.00 0.00 0.00 2.57
3730 5046 8.883731 GTTACTCTGCAATATACACTGTCAATT 58.116 33.333 0.00 0.00 0.00 2.32
3731 5047 7.928307 ACTCTGCAATATACACTGTCAATTT 57.072 32.000 0.00 0.00 0.00 1.82
3732 5048 7.978982 ACTCTGCAATATACACTGTCAATTTC 58.021 34.615 0.00 0.00 0.00 2.17
3733 5049 7.003939 TCTGCAATATACACTGTCAATTTCG 57.996 36.000 0.00 0.00 0.00 3.46
3734 5050 6.037062 TCTGCAATATACACTGTCAATTTCGG 59.963 38.462 0.00 0.00 0.00 4.30
3735 5051 5.645929 TGCAATATACACTGTCAATTTCGGT 59.354 36.000 0.00 0.00 0.00 4.69
3736 5052 6.150307 TGCAATATACACTGTCAATTTCGGTT 59.850 34.615 0.00 0.00 0.00 4.44
3737 5053 7.334671 TGCAATATACACTGTCAATTTCGGTTA 59.665 33.333 0.00 0.00 0.00 2.85
3738 5054 7.638683 GCAATATACACTGTCAATTTCGGTTAC 59.361 37.037 0.00 0.00 0.00 2.50
3739 5055 8.879759 CAATATACACTGTCAATTTCGGTTACT 58.120 33.333 0.00 0.00 0.00 2.24
3740 5056 6.963049 ATACACTGTCAATTTCGGTTACTC 57.037 37.500 0.00 0.00 0.00 2.59
3811 5589 4.212214 GCTAAGCTAATGGTGCAGTATGTC 59.788 45.833 0.00 0.00 39.31 3.06
3896 5674 6.911484 GAATCACGAACGATTCAACAAAAT 57.089 33.333 16.57 0.00 46.97 1.82
3943 5721 6.319152 TGGTATTTTTGTTTGAGAAGGTTCGA 59.681 34.615 0.00 0.00 0.00 3.71
3971 5753 9.654663 ACTCTGTAAAGAAATATAAGAGCGTTT 57.345 29.630 0.00 0.00 0.00 3.60
3988 5770 9.654663 AAGAGCGTTTAGATCACTATTTTAGTT 57.345 29.630 0.00 0.00 37.82 2.24
3989 5771 9.654663 AGAGCGTTTAGATCACTATTTTAGTTT 57.345 29.630 0.00 0.00 37.82 2.66
4046 5828 6.910536 ATTTCGAGCGTTTAGATCAGAAAT 57.089 33.333 0.00 8.89 40.23 2.17
4053 5835 8.845648 CGAGCGTTTAGATCAGAAATATAAGAG 58.154 37.037 0.00 0.00 34.30 2.85
4054 5836 9.685828 GAGCGTTTAGATCAGAAATATAAGAGT 57.314 33.333 0.00 0.00 34.89 3.24
4126 5977 6.973474 CAGAGGGAGTACTTATGAAGTTAACG 59.027 42.308 0.00 0.00 42.81 3.18
4145 5996 2.307686 ACGATACCCCCAATTCAACAGT 59.692 45.455 0.00 0.00 0.00 3.55
4149 6000 0.614697 CCCCCAATTCAACAGTCCCC 60.615 60.000 0.00 0.00 0.00 4.81
4151 6002 0.409484 CCCAATTCAACAGTCCCCCT 59.591 55.000 0.00 0.00 0.00 4.79
4152 6003 1.616994 CCCAATTCAACAGTCCCCCTC 60.617 57.143 0.00 0.00 0.00 4.30
4155 6006 0.178831 ATTCAACAGTCCCCCTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
4157 6008 1.229658 CAACAGTCCCCCTCCCTCT 60.230 63.158 0.00 0.00 0.00 3.69
4158 6009 0.042731 CAACAGTCCCCCTCCCTCTA 59.957 60.000 0.00 0.00 0.00 2.43
4160 6011 0.340208 ACAGTCCCCCTCCCTCTAAG 59.660 60.000 0.00 0.00 0.00 2.18
4161 6012 0.637195 CAGTCCCCCTCCCTCTAAGA 59.363 60.000 0.00 0.00 0.00 2.10
4162 6013 1.221781 CAGTCCCCCTCCCTCTAAGAT 59.778 57.143 0.00 0.00 0.00 2.40
4163 6014 1.221781 AGTCCCCCTCCCTCTAAGATG 59.778 57.143 0.00 0.00 0.00 2.90
4164 6015 0.568192 TCCCCCTCCCTCTAAGATGG 59.432 60.000 0.00 0.00 0.00 3.51
4165 6016 0.568192 CCCCCTCCCTCTAAGATGGA 59.432 60.000 0.00 0.00 0.00 3.41
4166 6017 1.153132 CCCCCTCCCTCTAAGATGGAT 59.847 57.143 0.00 0.00 0.00 3.41
4167 6018 2.545810 CCCCTCCCTCTAAGATGGATC 58.454 57.143 0.00 0.00 0.00 3.36
4168 6019 2.158097 CCCCTCCCTCTAAGATGGATCA 60.158 54.545 0.00 0.00 0.00 2.92
4169 6020 3.591789 CCCTCCCTCTAAGATGGATCAA 58.408 50.000 0.00 0.00 0.00 2.57
4170 6021 4.174383 CCCTCCCTCTAAGATGGATCAAT 58.826 47.826 0.00 0.00 0.00 2.57
4171 6022 4.600983 CCCTCCCTCTAAGATGGATCAATT 59.399 45.833 0.00 0.00 0.00 2.32
4172 6023 5.514484 CCCTCCCTCTAAGATGGATCAATTG 60.514 48.000 0.00 0.00 0.00 2.32
4173 6024 5.514484 CCTCCCTCTAAGATGGATCAATTGG 60.514 48.000 5.42 0.00 0.00 3.16
4174 6025 5.226803 TCCCTCTAAGATGGATCAATTGGA 58.773 41.667 5.42 0.00 0.00 3.53
4175 6026 5.072329 TCCCTCTAAGATGGATCAATTGGAC 59.928 44.000 5.42 0.01 0.00 4.02
4176 6027 5.072872 CCCTCTAAGATGGATCAATTGGACT 59.927 44.000 5.42 0.00 0.00 3.85
4177 6028 6.270927 CCCTCTAAGATGGATCAATTGGACTA 59.729 42.308 5.42 0.00 0.00 2.59
4178 6029 7.385267 CCTCTAAGATGGATCAATTGGACTAG 58.615 42.308 5.42 0.00 0.00 2.57
4179 6030 7.308450 TCTAAGATGGATCAATTGGACTAGG 57.692 40.000 5.42 0.00 0.00 3.02
4180 6031 4.363991 AGATGGATCAATTGGACTAGGC 57.636 45.455 5.42 0.00 0.00 3.93
4181 6032 3.718434 AGATGGATCAATTGGACTAGGCA 59.282 43.478 5.42 0.00 0.00 4.75
4182 6033 4.353191 AGATGGATCAATTGGACTAGGCAT 59.647 41.667 5.42 0.00 0.00 4.40
4183 6034 5.549228 AGATGGATCAATTGGACTAGGCATA 59.451 40.000 5.42 0.00 0.00 3.14
4184 6035 5.848286 TGGATCAATTGGACTAGGCATAT 57.152 39.130 5.42 0.00 0.00 1.78
4185 6036 6.950860 TGGATCAATTGGACTAGGCATATA 57.049 37.500 5.42 0.00 0.00 0.86
4186 6037 7.328404 TGGATCAATTGGACTAGGCATATAA 57.672 36.000 5.42 0.00 0.00 0.98
4187 6038 7.754624 TGGATCAATTGGACTAGGCATATAAA 58.245 34.615 5.42 0.00 0.00 1.40
4188 6039 7.884877 TGGATCAATTGGACTAGGCATATAAAG 59.115 37.037 5.42 0.00 0.00 1.85
4189 6040 7.337942 GGATCAATTGGACTAGGCATATAAAGG 59.662 40.741 5.42 0.00 0.00 3.11
4190 6041 7.149202 TCAATTGGACTAGGCATATAAAGGT 57.851 36.000 5.42 0.00 0.00 3.50
4191 6042 7.224297 TCAATTGGACTAGGCATATAAAGGTC 58.776 38.462 5.42 0.00 0.00 3.85
4192 6043 7.072454 TCAATTGGACTAGGCATATAAAGGTCT 59.928 37.037 5.42 0.00 0.00 3.85
4193 6044 6.420913 TTGGACTAGGCATATAAAGGTCTC 57.579 41.667 0.00 0.00 0.00 3.36
4194 6045 5.464069 TGGACTAGGCATATAAAGGTCTCA 58.536 41.667 0.00 0.00 0.00 3.27
4195 6046 5.903010 TGGACTAGGCATATAAAGGTCTCAA 59.097 40.000 0.00 0.00 0.00 3.02
4196 6047 6.385759 TGGACTAGGCATATAAAGGTCTCAAA 59.614 38.462 0.00 0.00 0.00 2.69
4197 6048 6.706716 GGACTAGGCATATAAAGGTCTCAAAC 59.293 42.308 0.00 0.00 0.00 2.93
4198 6049 7.195374 ACTAGGCATATAAAGGTCTCAAACA 57.805 36.000 0.00 0.00 0.00 2.83
4199 6050 7.630082 ACTAGGCATATAAAGGTCTCAAACAA 58.370 34.615 0.00 0.00 0.00 2.83
4200 6051 8.107095 ACTAGGCATATAAAGGTCTCAAACAAA 58.893 33.333 0.00 0.00 0.00 2.83
4201 6052 7.961326 AGGCATATAAAGGTCTCAAACAAAT 57.039 32.000 0.00 0.00 0.00 2.32
4203 6054 9.474313 AGGCATATAAAGGTCTCAAACAAATAA 57.526 29.630 0.00 0.00 0.00 1.40
4204 6055 9.736023 GGCATATAAAGGTCTCAAACAAATAAG 57.264 33.333 0.00 0.00 0.00 1.73
4210 6061 7.881775 AAGGTCTCAAACAAATAAGAAGTGT 57.118 32.000 0.00 0.00 0.00 3.55
4211 6062 7.264373 AGGTCTCAAACAAATAAGAAGTGTG 57.736 36.000 0.00 0.00 0.00 3.82
4212 6063 7.054124 AGGTCTCAAACAAATAAGAAGTGTGA 58.946 34.615 0.00 0.00 0.00 3.58
4213 6064 7.556275 AGGTCTCAAACAAATAAGAAGTGTGAA 59.444 33.333 0.00 0.00 29.73 3.18
4214 6065 8.188139 GGTCTCAAACAAATAAGAAGTGTGAAA 58.812 33.333 0.00 0.00 29.73 2.69
4215 6066 9.010366 GTCTCAAACAAATAAGAAGTGTGAAAC 57.990 33.333 0.00 0.00 29.73 2.78
4216 6067 8.956426 TCTCAAACAAATAAGAAGTGTGAAACT 58.044 29.630 0.00 0.00 42.60 2.66
4231 6082 9.529325 AAGTGTGAAACTAAAGAATTTTAAGCC 57.471 29.630 0.00 0.00 38.56 4.35
4232 6083 8.141909 AGTGTGAAACTAAAGAATTTTAAGCCC 58.858 33.333 0.00 0.00 37.36 5.19
4233 6084 8.141909 GTGTGAAACTAAAGAATTTTAAGCCCT 58.858 33.333 0.00 0.00 32.67 5.19
4234 6085 8.700973 TGTGAAACTAAAGAATTTTAAGCCCTT 58.299 29.630 0.00 0.00 32.67 3.95
4235 6086 8.978539 GTGAAACTAAAGAATTTTAAGCCCTTG 58.021 33.333 0.00 0.00 40.09 3.61
4236 6087 8.147704 TGAAACTAAAGAATTTTAAGCCCTTGG 58.852 33.333 0.00 0.00 40.09 3.61
4237 6088 7.849322 AACTAAAGAATTTTAAGCCCTTGGA 57.151 32.000 0.00 0.00 40.09 3.53
4238 6089 8.435931 AACTAAAGAATTTTAAGCCCTTGGAT 57.564 30.769 0.00 0.00 40.09 3.41
4239 6090 8.435931 ACTAAAGAATTTTAAGCCCTTGGATT 57.564 30.769 0.00 0.00 40.09 3.01
4240 6091 8.531982 ACTAAAGAATTTTAAGCCCTTGGATTC 58.468 33.333 0.00 0.00 40.09 2.52
4241 6092 5.939764 AGAATTTTAAGCCCTTGGATTCC 57.060 39.130 0.00 0.00 31.96 3.01
4242 6093 5.593786 AGAATTTTAAGCCCTTGGATTCCT 58.406 37.500 3.95 0.00 31.96 3.36
4243 6094 6.741724 AGAATTTTAAGCCCTTGGATTCCTA 58.258 36.000 3.95 0.00 31.96 2.94
4244 6095 6.836007 AGAATTTTAAGCCCTTGGATTCCTAG 59.164 38.462 7.14 7.14 31.96 3.02
4245 6096 3.577805 TTAAGCCCTTGGATTCCTAGC 57.422 47.619 8.48 4.12 31.96 3.42
4246 6097 0.553333 AAGCCCTTGGATTCCTAGCC 59.447 55.000 8.48 2.63 0.00 3.93
4247 6098 0.327964 AGCCCTTGGATTCCTAGCCT 60.328 55.000 8.48 4.65 0.00 4.58
4248 6099 0.553333 GCCCTTGGATTCCTAGCCTT 59.447 55.000 8.48 0.00 0.00 4.35
4249 6100 1.063642 GCCCTTGGATTCCTAGCCTTT 60.064 52.381 8.48 0.00 0.00 3.11
4250 6101 2.624293 GCCCTTGGATTCCTAGCCTTTT 60.624 50.000 8.48 0.00 0.00 2.27
4251 6102 3.291584 CCCTTGGATTCCTAGCCTTTTC 58.708 50.000 8.48 0.00 0.00 2.29
4252 6103 2.945668 CCTTGGATTCCTAGCCTTTTCG 59.054 50.000 8.48 0.00 0.00 3.46
4253 6104 3.610911 CTTGGATTCCTAGCCTTTTCGT 58.389 45.455 3.95 0.00 0.00 3.85
4254 6105 3.713826 TGGATTCCTAGCCTTTTCGTT 57.286 42.857 3.95 0.00 0.00 3.85
4255 6106 3.606687 TGGATTCCTAGCCTTTTCGTTC 58.393 45.455 3.95 0.00 0.00 3.95
4256 6107 2.608090 GGATTCCTAGCCTTTTCGTTCG 59.392 50.000 0.00 0.00 0.00 3.95
4257 6108 2.088950 TTCCTAGCCTTTTCGTTCGG 57.911 50.000 0.00 0.00 0.00 4.30
4258 6109 0.971386 TCCTAGCCTTTTCGTTCGGT 59.029 50.000 0.00 0.00 0.00 4.69
4259 6110 1.345415 TCCTAGCCTTTTCGTTCGGTT 59.655 47.619 0.00 0.00 0.00 4.44
4260 6111 1.463444 CCTAGCCTTTTCGTTCGGTTG 59.537 52.381 0.00 0.00 0.00 3.77
4261 6112 2.140717 CTAGCCTTTTCGTTCGGTTGT 58.859 47.619 0.00 0.00 0.00 3.32
4262 6113 1.385528 AGCCTTTTCGTTCGGTTGTT 58.614 45.000 0.00 0.00 0.00 2.83
4263 6114 1.064952 AGCCTTTTCGTTCGGTTGTTG 59.935 47.619 0.00 0.00 0.00 3.33
4264 6115 1.064357 GCCTTTTCGTTCGGTTGTTGA 59.936 47.619 0.00 0.00 0.00 3.18
4265 6116 2.478200 GCCTTTTCGTTCGGTTGTTGAA 60.478 45.455 0.00 0.00 0.00 2.69
4266 6117 3.794138 GCCTTTTCGTTCGGTTGTTGAAT 60.794 43.478 0.00 0.00 0.00 2.57
4267 6118 3.728718 CCTTTTCGTTCGGTTGTTGAATG 59.271 43.478 0.00 0.00 34.40 2.67
4268 6119 4.347813 CTTTTCGTTCGGTTGTTGAATGT 58.652 39.130 0.00 0.00 34.65 2.71
4269 6120 4.358494 TTTCGTTCGGTTGTTGAATGTT 57.642 36.364 0.00 0.00 34.65 2.71
4270 6121 3.326733 TCGTTCGGTTGTTGAATGTTG 57.673 42.857 0.00 0.00 34.65 3.33
4271 6122 2.937149 TCGTTCGGTTGTTGAATGTTGA 59.063 40.909 0.00 0.00 34.65 3.18
4272 6123 3.001838 TCGTTCGGTTGTTGAATGTTGAG 59.998 43.478 0.00 0.00 34.65 3.02
4273 6124 3.001838 CGTTCGGTTGTTGAATGTTGAGA 59.998 43.478 0.00 0.00 0.00 3.27
4274 6125 4.319477 CGTTCGGTTGTTGAATGTTGAGAT 60.319 41.667 0.00 0.00 0.00 2.75
4275 6126 5.519722 GTTCGGTTGTTGAATGTTGAGATT 58.480 37.500 0.00 0.00 0.00 2.40
4276 6127 5.766150 TCGGTTGTTGAATGTTGAGATTT 57.234 34.783 0.00 0.00 0.00 2.17
4277 6128 5.518812 TCGGTTGTTGAATGTTGAGATTTG 58.481 37.500 0.00 0.00 0.00 2.32
4278 6129 4.148696 CGGTTGTTGAATGTTGAGATTTGC 59.851 41.667 0.00 0.00 0.00 3.68
4279 6130 5.291971 GGTTGTTGAATGTTGAGATTTGCT 58.708 37.500 0.00 0.00 0.00 3.91
4280 6131 5.754890 GGTTGTTGAATGTTGAGATTTGCTT 59.245 36.000 0.00 0.00 0.00 3.91
4281 6132 6.922957 GGTTGTTGAATGTTGAGATTTGCTTA 59.077 34.615 0.00 0.00 0.00 3.09
4282 6133 7.437862 GGTTGTTGAATGTTGAGATTTGCTTAA 59.562 33.333 0.00 0.00 0.00 1.85
4283 6134 8.981647 GTTGTTGAATGTTGAGATTTGCTTAAT 58.018 29.630 0.00 0.00 0.00 1.40
4284 6135 8.523523 TGTTGAATGTTGAGATTTGCTTAATG 57.476 30.769 0.00 0.00 0.00 1.90
4285 6136 8.358895 TGTTGAATGTTGAGATTTGCTTAATGA 58.641 29.630 0.00 0.00 0.00 2.57
4286 6137 8.642020 GTTGAATGTTGAGATTTGCTTAATGAC 58.358 33.333 0.00 0.00 0.00 3.06
4287 6138 8.114331 TGAATGTTGAGATTTGCTTAATGACT 57.886 30.769 0.00 0.00 0.00 3.41
4288 6139 8.579006 TGAATGTTGAGATTTGCTTAATGACTT 58.421 29.630 0.00 0.00 0.00 3.01
4289 6140 8.752766 AATGTTGAGATTTGCTTAATGACTTG 57.247 30.769 0.00 0.00 0.00 3.16
4290 6141 7.275888 TGTTGAGATTTGCTTAATGACTTGT 57.724 32.000 0.00 0.00 0.00 3.16
4291 6142 7.715657 TGTTGAGATTTGCTTAATGACTTGTT 58.284 30.769 0.00 0.00 0.00 2.83
4292 6143 8.196771 TGTTGAGATTTGCTTAATGACTTGTTT 58.803 29.630 0.00 0.00 0.00 2.83
4293 6144 8.482429 GTTGAGATTTGCTTAATGACTTGTTTG 58.518 33.333 0.00 0.00 0.00 2.93
4294 6145 7.939782 TGAGATTTGCTTAATGACTTGTTTGA 58.060 30.769 0.00 0.00 0.00 2.69
4295 6146 8.579006 TGAGATTTGCTTAATGACTTGTTTGAT 58.421 29.630 0.00 0.00 0.00 2.57
4296 6147 8.752766 AGATTTGCTTAATGACTTGTTTGATG 57.247 30.769 0.00 0.00 0.00 3.07
4297 6148 8.579006 AGATTTGCTTAATGACTTGTTTGATGA 58.421 29.630 0.00 0.00 0.00 2.92
4298 6149 9.362539 GATTTGCTTAATGACTTGTTTGATGAT 57.637 29.630 0.00 0.00 0.00 2.45
4299 6150 8.523523 TTTGCTTAATGACTTGTTTGATGATG 57.476 30.769 0.00 0.00 0.00 3.07
4300 6151 6.623486 TGCTTAATGACTTGTTTGATGATGG 58.377 36.000 0.00 0.00 0.00 3.51
4301 6152 6.433716 TGCTTAATGACTTGTTTGATGATGGA 59.566 34.615 0.00 0.00 0.00 3.41
4302 6153 7.039853 TGCTTAATGACTTGTTTGATGATGGAA 60.040 33.333 0.00 0.00 0.00 3.53
4303 6154 7.977853 GCTTAATGACTTGTTTGATGATGGAAT 59.022 33.333 0.00 0.00 0.00 3.01
4307 6158 9.811995 AATGACTTGTTTGATGATGGAATATTG 57.188 29.630 0.00 0.00 0.00 1.90
4308 6159 8.352137 TGACTTGTTTGATGATGGAATATTGT 57.648 30.769 0.00 0.00 0.00 2.71
4309 6160 8.245491 TGACTTGTTTGATGATGGAATATTGTG 58.755 33.333 0.00 0.00 0.00 3.33
4310 6161 8.125978 ACTTGTTTGATGATGGAATATTGTGT 57.874 30.769 0.00 0.00 0.00 3.72
4311 6162 9.241919 ACTTGTTTGATGATGGAATATTGTGTA 57.758 29.630 0.00 0.00 0.00 2.90
4314 6165 9.853555 TGTTTGATGATGGAATATTGTGTAAAC 57.146 29.630 0.00 0.00 0.00 2.01
4315 6166 9.301153 GTTTGATGATGGAATATTGTGTAAACC 57.699 33.333 0.00 0.00 0.00 3.27
4316 6167 8.821686 TTGATGATGGAATATTGTGTAAACCT 57.178 30.769 0.00 0.00 0.00 3.50
4317 6168 8.821686 TGATGATGGAATATTGTGTAAACCTT 57.178 30.769 0.00 0.00 0.00 3.50
4318 6169 8.902806 TGATGATGGAATATTGTGTAAACCTTC 58.097 33.333 0.00 0.00 0.00 3.46
4319 6170 8.821686 ATGATGGAATATTGTGTAAACCTTCA 57.178 30.769 0.00 0.00 35.65 3.02
4320 6171 8.821686 TGATGGAATATTGTGTAAACCTTCAT 57.178 30.769 0.00 0.00 0.00 2.57
4321 6172 9.253832 TGATGGAATATTGTGTAAACCTTCATT 57.746 29.630 0.00 0.00 0.00 2.57
4324 6175 9.703892 TGGAATATTGTGTAAACCTTCATTTTG 57.296 29.630 0.00 0.00 0.00 2.44
4325 6176 9.921637 GGAATATTGTGTAAACCTTCATTTTGA 57.078 29.630 0.00 0.00 0.00 2.69
4331 6182 9.743057 TTGTGTAAACCTTCATTTTGATTACTG 57.257 29.630 0.00 0.00 0.00 2.74
4332 6183 9.126151 TGTGTAAACCTTCATTTTGATTACTGA 57.874 29.630 0.00 0.00 0.00 3.41
4361 6212 2.414058 TTTTTGCACATGGCTACACG 57.586 45.000 0.00 0.00 45.15 4.49
4362 6213 1.313772 TTTTGCACATGGCTACACGT 58.686 45.000 0.00 0.00 45.15 4.49
4363 6214 0.590682 TTTGCACATGGCTACACGTG 59.409 50.000 15.48 15.48 43.26 4.49
4365 6216 2.778026 CACATGGCTACACGTGCG 59.222 61.111 17.22 8.37 33.75 5.34
4366 6217 2.027073 CACATGGCTACACGTGCGT 61.027 57.895 17.22 0.00 33.75 5.24
4367 6218 1.301401 ACATGGCTACACGTGCGTT 60.301 52.632 17.22 0.00 0.00 4.84
4368 6219 1.132436 CATGGCTACACGTGCGTTG 59.868 57.895 17.22 4.38 0.00 4.10
4369 6220 2.677003 ATGGCTACACGTGCGTTGC 61.677 57.895 17.22 14.14 36.98 4.17
4370 6221 3.342627 GGCTACACGTGCGTTGCA 61.343 61.111 17.22 0.00 39.06 4.08
4371 6222 2.677003 GGCTACACGTGCGTTGCAT 61.677 57.895 17.22 0.00 41.91 3.96
4391 6242 6.037423 GCATGTGCACATTTACTAGTCTAC 57.963 41.667 29.48 0.00 41.59 2.59
4392 6243 5.580691 GCATGTGCACATTTACTAGTCTACA 59.419 40.000 29.48 0.00 41.59 2.74
4393 6244 6.092122 GCATGTGCACATTTACTAGTCTACAA 59.908 38.462 29.48 0.00 41.59 2.41
4394 6245 7.360861 GCATGTGCACATTTACTAGTCTACAAA 60.361 37.037 29.48 0.00 41.59 2.83
4395 6246 7.652300 TGTGCACATTTACTAGTCTACAAAG 57.348 36.000 17.42 0.00 0.00 2.77
4396 6247 7.438564 TGTGCACATTTACTAGTCTACAAAGA 58.561 34.615 17.42 0.00 0.00 2.52
4397 6248 8.094548 TGTGCACATTTACTAGTCTACAAAGAT 58.905 33.333 17.42 0.00 33.30 2.40
4398 6249 8.596380 GTGCACATTTACTAGTCTACAAAGATC 58.404 37.037 13.17 0.00 33.30 2.75
4399 6250 7.764443 TGCACATTTACTAGTCTACAAAGATCC 59.236 37.037 0.00 0.00 33.30 3.36
4400 6251 7.982354 GCACATTTACTAGTCTACAAAGATCCT 59.018 37.037 0.00 0.00 33.30 3.24
4401 6252 9.522804 CACATTTACTAGTCTACAAAGATCCTC 57.477 37.037 0.00 0.00 33.30 3.71
4402 6253 9.256228 ACATTTACTAGTCTACAAAGATCCTCA 57.744 33.333 0.00 0.00 33.30 3.86
4406 6257 7.962995 ACTAGTCTACAAAGATCCTCATTCA 57.037 36.000 0.00 0.00 33.30 2.57
4407 6258 8.367660 ACTAGTCTACAAAGATCCTCATTCAA 57.632 34.615 0.00 0.00 33.30 2.69
4408 6259 8.816894 ACTAGTCTACAAAGATCCTCATTCAAA 58.183 33.333 0.00 0.00 33.30 2.69
4409 6260 7.913674 AGTCTACAAAGATCCTCATTCAAAC 57.086 36.000 0.00 0.00 33.30 2.93
4410 6261 7.453393 AGTCTACAAAGATCCTCATTCAAACA 58.547 34.615 0.00 0.00 33.30 2.83
4411 6262 7.605691 AGTCTACAAAGATCCTCATTCAAACAG 59.394 37.037 0.00 0.00 33.30 3.16
4412 6263 5.972107 ACAAAGATCCTCATTCAAACAGG 57.028 39.130 0.00 0.00 0.00 4.00
4413 6264 4.219288 ACAAAGATCCTCATTCAAACAGGC 59.781 41.667 0.00 0.00 0.00 4.85
4414 6265 3.726557 AGATCCTCATTCAAACAGGCA 57.273 42.857 0.00 0.00 0.00 4.75
4415 6266 3.350833 AGATCCTCATTCAAACAGGCAC 58.649 45.455 0.00 0.00 0.00 5.01
4416 6267 1.909700 TCCTCATTCAAACAGGCACC 58.090 50.000 0.00 0.00 0.00 5.01
4417 6268 1.425066 TCCTCATTCAAACAGGCACCT 59.575 47.619 0.00 0.00 0.00 4.00
4418 6269 2.158475 TCCTCATTCAAACAGGCACCTT 60.158 45.455 0.00 0.00 0.00 3.50
4419 6270 2.229784 CCTCATTCAAACAGGCACCTTC 59.770 50.000 0.00 0.00 0.00 3.46
4420 6271 2.229784 CTCATTCAAACAGGCACCTTCC 59.770 50.000 0.00 0.00 0.00 3.46
4421 6272 1.273327 CATTCAAACAGGCACCTTCCC 59.727 52.381 0.00 0.00 0.00 3.97
4422 6273 0.469144 TTCAAACAGGCACCTTCCCC 60.469 55.000 0.00 0.00 0.00 4.81
4423 6274 1.153756 CAAACAGGCACCTTCCCCT 59.846 57.895 0.00 0.00 0.00 4.79
4424 6275 0.895559 CAAACAGGCACCTTCCCCTC 60.896 60.000 0.00 0.00 0.00 4.30
4425 6276 1.068352 AAACAGGCACCTTCCCCTCT 61.068 55.000 0.00 0.00 0.00 3.69
4426 6277 0.178873 AACAGGCACCTTCCCCTCTA 60.179 55.000 0.00 0.00 0.00 2.43
4427 6278 0.044855 ACAGGCACCTTCCCCTCTAT 59.955 55.000 0.00 0.00 0.00 1.98
4428 6279 1.216990 CAGGCACCTTCCCCTCTATT 58.783 55.000 0.00 0.00 0.00 1.73
4429 6280 1.141858 CAGGCACCTTCCCCTCTATTC 59.858 57.143 0.00 0.00 0.00 1.75
4430 6281 0.474614 GGCACCTTCCCCTCTATTCC 59.525 60.000 0.00 0.00 0.00 3.01
4431 6282 1.512735 GCACCTTCCCCTCTATTCCT 58.487 55.000 0.00 0.00 0.00 3.36
4432 6283 1.418264 GCACCTTCCCCTCTATTCCTC 59.582 57.143 0.00 0.00 0.00 3.71
4433 6284 2.961977 GCACCTTCCCCTCTATTCCTCT 60.962 54.545 0.00 0.00 0.00 3.69
4434 6285 2.969262 CACCTTCCCCTCTATTCCTCTC 59.031 54.545 0.00 0.00 0.00 3.20
4435 6286 2.243810 CCTTCCCCTCTATTCCTCTCG 58.756 57.143 0.00 0.00 0.00 4.04
4436 6287 2.425102 CCTTCCCCTCTATTCCTCTCGT 60.425 54.545 0.00 0.00 0.00 4.18
4437 6288 2.366640 TCCCCTCTATTCCTCTCGTG 57.633 55.000 0.00 0.00 0.00 4.35
4438 6289 1.850998 TCCCCTCTATTCCTCTCGTGA 59.149 52.381 0.00 0.00 0.00 4.35
4439 6290 1.957877 CCCCTCTATTCCTCTCGTGAC 59.042 57.143 0.00 0.00 0.00 3.67
4440 6291 2.656002 CCCTCTATTCCTCTCGTGACA 58.344 52.381 0.00 0.00 0.00 3.58
4441 6292 2.359531 CCCTCTATTCCTCTCGTGACAC 59.640 54.545 0.00 0.00 0.00 3.67
4442 6293 2.032302 CCTCTATTCCTCTCGTGACACG 59.968 54.545 21.88 21.88 44.19 4.49
4450 6301 4.400109 TCGTGACACGAGCCGAGC 62.400 66.667 26.04 0.00 46.73 5.03
4451 6302 4.406173 CGTGACACGAGCCGAGCT 62.406 66.667 23.39 0.00 46.05 4.09
4470 6321 4.473520 CGGGCTCCGGACTTGCAT 62.474 66.667 15.29 0.00 44.15 3.96
4471 6322 2.514824 GGGCTCCGGACTTGCATC 60.515 66.667 15.29 4.19 0.00 3.91
4472 6323 2.586792 GGCTCCGGACTTGCATCT 59.413 61.111 15.29 0.00 0.00 2.90
4473 6324 1.817099 GGCTCCGGACTTGCATCTG 60.817 63.158 15.29 0.00 0.00 2.90
4474 6325 2.467826 GCTCCGGACTTGCATCTGC 61.468 63.158 0.00 0.00 42.50 4.26
4475 6326 2.125552 TCCGGACTTGCATCTGCG 60.126 61.111 0.00 0.00 45.83 5.18
4476 6327 3.197790 CCGGACTTGCATCTGCGG 61.198 66.667 9.25 9.25 45.83 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
177 178 4.381505 GGAAACCAGTCTGTTCAAGCAAAA 60.382 41.667 0.00 0.00 0.00 2.44
178 179 3.130340 GGAAACCAGTCTGTTCAAGCAAA 59.870 43.478 0.00 0.00 0.00 3.68
237 238 9.853177 GAATAAAGATTCTTTGGATCCTTCCTA 57.147 33.333 19.60 0.00 39.50 2.94
249 250 7.202016 TGACAACGCTGAATAAAGATTCTTT 57.798 32.000 15.57 15.57 41.87 2.52
317 318 6.072286 TGGATCGTTTTTACTCTCTCGTAGTT 60.072 38.462 0.00 0.00 0.00 2.24
409 411 0.741221 GATCTTCCAACGCCGCTCTT 60.741 55.000 0.00 0.00 0.00 2.85
504 506 4.740235 GGATACGACTCTGCCTGC 57.260 61.111 0.00 0.00 0.00 4.85
537 539 1.059657 CTTTCAATGCGCGTCAACCG 61.060 55.000 8.43 0.00 40.40 4.44
538 540 0.237235 TCTTTCAATGCGCGTCAACC 59.763 50.000 8.43 0.00 0.00 3.77
539 541 2.169179 GATCTTTCAATGCGCGTCAAC 58.831 47.619 8.43 0.00 0.00 3.18
540 542 1.803555 TGATCTTTCAATGCGCGTCAA 59.196 42.857 8.43 0.00 0.00 3.18
541 543 1.394572 CTGATCTTTCAATGCGCGTCA 59.605 47.619 8.43 6.86 0.00 4.35
542 544 1.267732 CCTGATCTTTCAATGCGCGTC 60.268 52.381 8.43 0.00 0.00 5.19
543 545 0.729116 CCTGATCTTTCAATGCGCGT 59.271 50.000 8.43 0.00 0.00 6.01
544 546 0.590732 GCCTGATCTTTCAATGCGCG 60.591 55.000 0.00 0.00 0.00 6.86
545 547 0.590732 CGCCTGATCTTTCAATGCGC 60.591 55.000 0.00 0.00 42.49 6.09
546 548 1.004185 CTCGCCTGATCTTTCAATGCG 60.004 52.381 11.21 11.21 46.46 4.73
547 549 2.012673 ACTCGCCTGATCTTTCAATGC 58.987 47.619 0.00 0.00 0.00 3.56
548 550 3.264947 TCACTCGCCTGATCTTTCAATG 58.735 45.455 0.00 0.00 0.00 2.82
549 551 3.616956 TCACTCGCCTGATCTTTCAAT 57.383 42.857 0.00 0.00 0.00 2.57
550 552 3.401033 TTCACTCGCCTGATCTTTCAA 57.599 42.857 0.00 0.00 0.00 2.69
551 553 3.616956 ATTCACTCGCCTGATCTTTCA 57.383 42.857 0.00 0.00 0.00 2.69
552 554 4.433615 TGTATTCACTCGCCTGATCTTTC 58.566 43.478 0.00 0.00 0.00 2.62
553 555 4.471904 TGTATTCACTCGCCTGATCTTT 57.528 40.909 0.00 0.00 0.00 2.52
554 556 4.679373 ATGTATTCACTCGCCTGATCTT 57.321 40.909 0.00 0.00 0.00 2.40
555 557 4.320567 CGTATGTATTCACTCGCCTGATCT 60.321 45.833 0.00 0.00 0.00 2.75
556 558 3.914966 CGTATGTATTCACTCGCCTGATC 59.085 47.826 0.00 0.00 0.00 2.92
557 559 3.318275 ACGTATGTATTCACTCGCCTGAT 59.682 43.478 0.00 0.00 0.00 2.90
558 560 2.686405 ACGTATGTATTCACTCGCCTGA 59.314 45.455 0.00 0.00 0.00 3.86
559 561 3.079960 ACGTATGTATTCACTCGCCTG 57.920 47.619 0.00 0.00 0.00 4.85
560 562 3.795623 AACGTATGTATTCACTCGCCT 57.204 42.857 0.00 0.00 0.00 5.52
561 563 3.244579 GGAAACGTATGTATTCACTCGCC 59.755 47.826 0.00 0.00 0.00 5.54
562 564 3.244579 GGGAAACGTATGTATTCACTCGC 59.755 47.826 0.00 0.00 0.00 5.03
563 565 4.426416 TGGGAAACGTATGTATTCACTCG 58.574 43.478 11.18 0.00 0.00 4.18
564 566 6.143438 CGTATGGGAAACGTATGTATTCACTC 59.857 42.308 11.18 4.63 35.66 3.51
565 567 5.981315 CGTATGGGAAACGTATGTATTCACT 59.019 40.000 11.18 3.59 35.66 3.41
566 568 5.176223 CCGTATGGGAAACGTATGTATTCAC 59.824 44.000 0.00 0.00 38.67 3.18
567 569 5.291178 CCGTATGGGAAACGTATGTATTCA 58.709 41.667 0.00 0.00 38.67 2.57
568 570 4.151157 GCCGTATGGGAAACGTATGTATTC 59.849 45.833 2.41 0.00 38.67 1.75
569 571 4.060205 GCCGTATGGGAAACGTATGTATT 58.940 43.478 2.41 0.00 38.67 1.89
570 572 3.555586 GGCCGTATGGGAAACGTATGTAT 60.556 47.826 2.41 0.00 38.67 2.29
571 573 2.224018 GGCCGTATGGGAAACGTATGTA 60.224 50.000 2.41 0.00 38.67 2.29
572 574 1.473788 GGCCGTATGGGAAACGTATGT 60.474 52.381 2.41 0.00 38.67 2.29
573 575 1.223187 GGCCGTATGGGAAACGTATG 58.777 55.000 2.41 0.00 38.67 2.39
574 576 0.831966 TGGCCGTATGGGAAACGTAT 59.168 50.000 2.41 0.00 38.67 3.06
575 577 0.831966 ATGGCCGTATGGGAAACGTA 59.168 50.000 0.00 0.00 38.67 3.57
576 578 0.831966 TATGGCCGTATGGGAAACGT 59.168 50.000 0.00 0.00 38.67 3.99
577 579 2.073816 GATATGGCCGTATGGGAAACG 58.926 52.381 22.47 0.00 38.47 3.60
578 580 3.418684 AGATATGGCCGTATGGGAAAC 57.581 47.619 22.47 6.59 38.47 2.78
579 581 5.570205 TTTAGATATGGCCGTATGGGAAA 57.430 39.130 22.47 14.79 38.47 3.13
580 582 5.772393 ATTTAGATATGGCCGTATGGGAA 57.228 39.130 22.47 12.80 38.47 3.97
581 583 6.844388 AGATATTTAGATATGGCCGTATGGGA 59.156 38.462 22.47 4.21 38.47 4.37
582 584 6.931281 CAGATATTTAGATATGGCCGTATGGG 59.069 42.308 22.47 0.00 39.58 4.00
583 585 7.653713 GTCAGATATTTAGATATGGCCGTATGG 59.346 40.741 22.47 0.00 38.77 2.74
584 586 7.379797 CGTCAGATATTTAGATATGGCCGTATG 59.620 40.741 22.47 5.44 0.00 2.39
585 587 7.068348 ACGTCAGATATTTAGATATGGCCGTAT 59.932 37.037 17.71 17.71 0.00 3.06
586 588 6.376299 ACGTCAGATATTTAGATATGGCCGTA 59.624 38.462 7.25 7.25 0.00 4.02
587 589 5.185249 ACGTCAGATATTTAGATATGGCCGT 59.815 40.000 1.35 1.35 0.00 5.68
588 590 5.651530 ACGTCAGATATTTAGATATGGCCG 58.348 41.667 0.00 0.00 0.00 6.13
589 591 8.997621 TTAACGTCAGATATTTAGATATGGCC 57.002 34.615 0.00 0.00 0.00 5.36
665 669 3.190118 CAGCTTCTTCTCTTTTCGGCAAT 59.810 43.478 0.00 0.00 0.00 3.56
671 675 1.815613 GGGCCAGCTTCTTCTCTTTTC 59.184 52.381 4.39 0.00 0.00 2.29
821 1749 4.680237 TCAGGTCGGCTGCGGTTG 62.680 66.667 7.10 5.25 0.00 3.77
822 1750 4.681978 GTCAGGTCGGCTGCGGTT 62.682 66.667 7.10 0.00 0.00 4.44
922 1850 0.114364 GGGTGGGGTTTGGATTCTGT 59.886 55.000 0.00 0.00 0.00 3.41
959 1887 2.074920 CGGTTTCGCTTTGCTTCGC 61.075 57.895 0.00 0.00 0.00 4.70
1089 2017 4.615815 ATGGCTCCGATGGCGAGC 62.616 66.667 8.88 8.88 40.82 5.03
1236 2164 0.029577 GGAGGGGAGAGAAAGGGGAT 60.030 60.000 0.00 0.00 0.00 3.85
1327 2255 2.009051 CACACACACACAGACACACAT 58.991 47.619 0.00 0.00 0.00 3.21
1332 2260 0.323302 ACCACACACACACACAGACA 59.677 50.000 0.00 0.00 0.00 3.41
1333 2261 0.726827 CACCACACACACACACAGAC 59.273 55.000 0.00 0.00 0.00 3.51
1334 2262 0.392327 CCACCACACACACACACAGA 60.392 55.000 0.00 0.00 0.00 3.41
1335 2263 1.992233 GCCACCACACACACACACAG 61.992 60.000 0.00 0.00 0.00 3.66
1336 2264 2.043405 GCCACCACACACACACACA 61.043 57.895 0.00 0.00 0.00 3.72
1337 2265 2.798009 GCCACCACACACACACAC 59.202 61.111 0.00 0.00 0.00 3.82
1338 2266 2.821810 CGCCACCACACACACACA 60.822 61.111 0.00 0.00 0.00 3.72
1339 2267 4.250431 GCGCCACCACACACACAC 62.250 66.667 0.00 0.00 0.00 3.82
1340 2268 4.481617 AGCGCCACCACACACACA 62.482 61.111 2.29 0.00 0.00 3.72
1341 2269 3.952675 CAGCGCCACCACACACAC 61.953 66.667 2.29 0.00 0.00 3.82
1541 2469 0.842030 AGATGGTGAAGGAGGTGGCA 60.842 55.000 0.00 0.00 0.00 4.92
1591 2519 2.324330 CGCACCGATGAAACCAGCA 61.324 57.895 0.00 0.00 0.00 4.41
1748 2681 3.981071 TCCACCTGAAGGAATACACAG 57.019 47.619 2.62 0.00 38.94 3.66
1758 2691 6.927416 TGATTTTGAATCAATCCACCTGAAG 58.073 36.000 0.00 0.00 30.64 3.02
1768 2701 9.512435 GATCTCGAACATTGATTTTGAATCAAT 57.488 29.630 18.36 18.36 46.29 2.57
1771 2704 7.430502 GGTGATCTCGAACATTGATTTTGAATC 59.569 37.037 0.00 0.00 0.00 2.52
1783 2716 3.282021 CCAATTGGGTGATCTCGAACAT 58.718 45.455 17.36 0.00 0.00 2.71
1801 2734 1.231018 CTATCATCCCCCAACCCCAA 58.769 55.000 0.00 0.00 0.00 4.12
1837 2770 0.325933 AGAGCAGCAGGTATTGTGCA 59.674 50.000 0.00 0.00 43.82 4.57
2133 3105 2.731451 TCAGCTGTCAAATTTCGACGAG 59.269 45.455 14.67 11.99 36.11 4.18
2177 3315 6.940831 TCATTTGATGAACTCAACAAGTCA 57.059 33.333 3.12 0.00 43.54 3.41
2307 3446 9.640963 GTCAAACTACTACATACTCACTTCATT 57.359 33.333 0.00 0.00 0.00 2.57
2341 3480 3.243334 GGACATACGCTACCTAACCTGAC 60.243 52.174 0.00 0.00 0.00 3.51
2355 3494 0.923403 CGTGCTGATGTGGACATACG 59.077 55.000 0.00 0.00 36.57 3.06
2362 3502 3.770263 AATCAATTCGTGCTGATGTGG 57.230 42.857 0.00 0.00 0.00 4.17
2475 3615 8.795786 TTTCTGAAATTAGGAACATTGTTTCG 57.204 30.769 3.08 0.00 0.00 3.46
2499 3639 4.134563 ACATGAACAGAACGCCTTTACTT 58.865 39.130 0.00 0.00 0.00 2.24
2588 3734 4.900635 ATAATTTGGACAGATGCCGTTC 57.099 40.909 0.00 0.00 0.00 3.95
2589 3735 4.704540 TGAATAATTTGGACAGATGCCGTT 59.295 37.500 0.00 0.00 0.00 4.44
2590 3736 4.269183 TGAATAATTTGGACAGATGCCGT 58.731 39.130 0.00 0.00 0.00 5.68
2591 3737 4.898829 TGAATAATTTGGACAGATGCCG 57.101 40.909 0.00 0.00 0.00 5.69
2592 3738 6.212888 ACTTGAATAATTTGGACAGATGCC 57.787 37.500 0.00 0.00 0.00 4.40
2593 3739 7.989826 ACTACTTGAATAATTTGGACAGATGC 58.010 34.615 0.00 0.00 0.00 3.91
2596 3742 9.349713 ACAAACTACTTGAATAATTTGGACAGA 57.650 29.630 0.00 0.00 38.50 3.41
2683 3990 9.353353 CGCAATTACACTATCATACTTTTTACG 57.647 33.333 0.00 0.00 0.00 3.18
2686 3993 8.941977 TGTCGCAATTACACTATCATACTTTTT 58.058 29.630 0.00 0.00 0.00 1.94
2687 3994 8.487313 TGTCGCAATTACACTATCATACTTTT 57.513 30.769 0.00 0.00 0.00 2.27
2688 3995 8.662781 ATGTCGCAATTACACTATCATACTTT 57.337 30.769 0.00 0.00 0.00 2.66
2689 3996 8.144478 AGATGTCGCAATTACACTATCATACTT 58.856 33.333 0.00 0.00 0.00 2.24
2690 3997 7.661968 AGATGTCGCAATTACACTATCATACT 58.338 34.615 0.00 0.00 0.00 2.12
2691 3998 7.875316 AGATGTCGCAATTACACTATCATAC 57.125 36.000 0.00 0.00 0.00 2.39
2693 4000 9.144747 GATTAGATGTCGCAATTACACTATCAT 57.855 33.333 0.00 0.00 0.00 2.45
2694 4001 8.360390 AGATTAGATGTCGCAATTACACTATCA 58.640 33.333 0.00 0.00 0.00 2.15
2741 4049 6.647895 TCTCAATAACACTTCTTTACCCGTTC 59.352 38.462 0.00 0.00 0.00 3.95
2743 4051 6.105397 TCTCAATAACACTTCTTTACCCGT 57.895 37.500 0.00 0.00 0.00 5.28
2744 4052 7.429636 TTTCTCAATAACACTTCTTTACCCG 57.570 36.000 0.00 0.00 0.00 5.28
2779 4087 3.050619 AGAAAGAAGCGTCGTACAGTTG 58.949 45.455 0.00 0.00 0.00 3.16
2886 4194 4.703897 CTTGTTCCCTGTTACAAGTCTCA 58.296 43.478 0.00 0.00 43.83 3.27
3018 4326 9.355215 CATATTACGGGAAGCTAAACTATGTAG 57.645 37.037 0.00 0.00 0.00 2.74
3019 4327 8.308931 CCATATTACGGGAAGCTAAACTATGTA 58.691 37.037 0.00 0.00 0.00 2.29
3020 4328 7.159372 CCATATTACGGGAAGCTAAACTATGT 58.841 38.462 0.00 0.00 0.00 2.29
3021 4329 7.159372 ACCATATTACGGGAAGCTAAACTATG 58.841 38.462 0.00 0.00 0.00 2.23
3062 4373 9.311916 CTGAAATTGGTTTTGAGTTCAATACAA 57.688 29.630 14.45 11.10 38.82 2.41
3063 4374 7.925483 CCTGAAATTGGTTTTGAGTTCAATACA 59.075 33.333 14.45 4.45 38.82 2.29
3064 4375 7.384932 CCCTGAAATTGGTTTTGAGTTCAATAC 59.615 37.037 6.84 6.84 37.17 1.89
3075 4386 5.147032 TCATGTCTCCCTGAAATTGGTTTT 58.853 37.500 0.00 0.00 0.00 2.43
3222 4533 1.484038 AACAAACCTCAGCCTTTGCA 58.516 45.000 0.00 0.00 41.13 4.08
3255 4566 7.993183 ACTTGTCAAGGAGAATTGAAGTAGAAA 59.007 33.333 16.85 0.00 40.72 2.52
3275 4586 9.757227 AAGCTGAGATGAATATTACTACTTGTC 57.243 33.333 0.00 0.00 0.00 3.18
3341 4652 8.498054 TCAGTTTCATGAGGATATCAAACTTC 57.502 34.615 11.78 0.66 42.53 3.01
3579 4893 2.609459 CACATAGTTCCATCGTGCTTCC 59.391 50.000 0.00 0.00 0.00 3.46
3600 4914 6.317857 CAAATAAGGTTCAGCTAGCAAGAAC 58.682 40.000 29.95 29.95 40.58 3.01
3711 5027 5.645929 ACCGAAATTGACAGTGTATATTGCA 59.354 36.000 0.00 0.00 0.00 4.08
3712 5028 6.119144 ACCGAAATTGACAGTGTATATTGC 57.881 37.500 0.00 0.00 0.00 3.56
3713 5029 8.879759 AGTAACCGAAATTGACAGTGTATATTG 58.120 33.333 0.00 0.00 0.00 1.90
3714 5030 9.095065 GAGTAACCGAAATTGACAGTGTATATT 57.905 33.333 0.00 0.00 0.00 1.28
3715 5031 8.475639 AGAGTAACCGAAATTGACAGTGTATAT 58.524 33.333 0.00 0.00 0.00 0.86
3716 5032 7.758076 CAGAGTAACCGAAATTGACAGTGTATA 59.242 37.037 0.00 0.00 0.00 1.47
3717 5033 6.590292 CAGAGTAACCGAAATTGACAGTGTAT 59.410 38.462 0.00 0.00 0.00 2.29
3718 5034 5.924254 CAGAGTAACCGAAATTGACAGTGTA 59.076 40.000 0.00 0.00 0.00 2.90
3719 5035 4.750098 CAGAGTAACCGAAATTGACAGTGT 59.250 41.667 0.00 0.00 0.00 3.55
3720 5036 4.377431 GCAGAGTAACCGAAATTGACAGTG 60.377 45.833 0.00 0.00 0.00 3.66
3721 5037 3.746492 GCAGAGTAACCGAAATTGACAGT 59.254 43.478 0.00 0.00 0.00 3.55
3722 5038 3.745975 TGCAGAGTAACCGAAATTGACAG 59.254 43.478 0.00 0.00 0.00 3.51
3723 5039 3.734463 TGCAGAGTAACCGAAATTGACA 58.266 40.909 0.00 0.00 0.00 3.58
3724 5040 4.742438 TTGCAGAGTAACCGAAATTGAC 57.258 40.909 0.00 0.00 0.00 3.18
3725 5041 7.766738 TGTATATTGCAGAGTAACCGAAATTGA 59.233 33.333 0.00 0.00 0.00 2.57
3726 5042 7.850982 GTGTATATTGCAGAGTAACCGAAATTG 59.149 37.037 0.00 0.00 0.00 2.32
3727 5043 7.769044 AGTGTATATTGCAGAGTAACCGAAATT 59.231 33.333 0.00 0.00 0.00 1.82
3728 5044 7.224753 CAGTGTATATTGCAGAGTAACCGAAAT 59.775 37.037 0.00 0.00 0.00 2.17
3729 5045 6.533723 CAGTGTATATTGCAGAGTAACCGAAA 59.466 38.462 0.00 0.00 0.00 3.46
3730 5046 6.040247 CAGTGTATATTGCAGAGTAACCGAA 58.960 40.000 0.00 0.00 0.00 4.30
3731 5047 5.126545 ACAGTGTATATTGCAGAGTAACCGA 59.873 40.000 0.00 0.00 0.00 4.69
3732 5048 5.348986 ACAGTGTATATTGCAGAGTAACCG 58.651 41.667 0.00 0.00 0.00 4.44
3733 5049 6.338146 TGACAGTGTATATTGCAGAGTAACC 58.662 40.000 0.00 0.00 0.00 2.85
3734 5050 7.827819 TTGACAGTGTATATTGCAGAGTAAC 57.172 36.000 0.00 0.00 0.00 2.50
3735 5051 9.448438 AAATTGACAGTGTATATTGCAGAGTAA 57.552 29.630 0.00 0.00 0.00 2.24
3736 5052 9.098355 GAAATTGACAGTGTATATTGCAGAGTA 57.902 33.333 0.00 0.00 0.00 2.59
3737 5053 7.607607 TGAAATTGACAGTGTATATTGCAGAGT 59.392 33.333 0.00 0.00 0.00 3.24
3738 5054 7.977904 TGAAATTGACAGTGTATATTGCAGAG 58.022 34.615 0.00 0.00 0.00 3.35
3739 5055 7.607607 ACTGAAATTGACAGTGTATATTGCAGA 59.392 33.333 28.36 6.36 45.19 4.26
3740 5056 7.755591 ACTGAAATTGACAGTGTATATTGCAG 58.244 34.615 23.82 23.82 45.19 4.41
4009 5791 9.997482 AAACGCTCGAAATACAATAATGTTTAT 57.003 25.926 0.00 0.00 41.05 1.40
4011 5793 9.485591 CTAAACGCTCGAAATACAATAATGTTT 57.514 29.630 0.00 0.00 41.05 2.83
4012 5794 8.875803 TCTAAACGCTCGAAATACAATAATGTT 58.124 29.630 0.00 0.00 41.05 2.71
4013 5795 8.415192 TCTAAACGCTCGAAATACAATAATGT 57.585 30.769 0.00 0.00 43.74 2.71
4014 5796 9.517361 GATCTAAACGCTCGAAATACAATAATG 57.483 33.333 0.00 0.00 0.00 1.90
4015 5797 9.256477 TGATCTAAACGCTCGAAATACAATAAT 57.744 29.630 0.00 0.00 0.00 1.28
4018 5800 6.978659 TCTGATCTAAACGCTCGAAATACAAT 59.021 34.615 0.00 0.00 0.00 2.71
4028 5810 9.685828 ACTCTTATATTTCTGATCTAAACGCTC 57.314 33.333 0.00 0.00 0.00 5.03
4096 5878 6.497259 ACTTCATAAGTACTCCCTCTGTGAAA 59.503 38.462 0.00 0.00 40.69 2.69
4097 5879 6.017192 ACTTCATAAGTACTCCCTCTGTGAA 58.983 40.000 0.00 0.00 40.69 3.18
4098 5880 5.580998 ACTTCATAAGTACTCCCTCTGTGA 58.419 41.667 0.00 0.00 40.69 3.58
4099 5881 5.923733 ACTTCATAAGTACTCCCTCTGTG 57.076 43.478 0.00 0.00 40.69 3.66
4101 5883 6.973474 CGTTAACTTCATAAGTACTCCCTCTG 59.027 42.308 3.71 0.00 41.91 3.35
4117 5968 5.187687 TGAATTGGGGGTATCGTTAACTTC 58.812 41.667 3.71 0.00 0.00 3.01
4126 5977 3.288092 GGACTGTTGAATTGGGGGTATC 58.712 50.000 0.00 0.00 0.00 2.24
4145 5996 0.568192 CCATCTTAGAGGGAGGGGGA 59.432 60.000 7.19 0.00 35.26 4.81
4149 6000 5.514484 CCAATTGATCCATCTTAGAGGGAGG 60.514 48.000 20.40 11.31 45.75 4.30
4151 6002 5.072329 GTCCAATTGATCCATCTTAGAGGGA 59.928 44.000 18.21 18.21 46.60 4.20
4152 6003 5.072872 AGTCCAATTGATCCATCTTAGAGGG 59.927 44.000 6.59 6.59 34.49 4.30
4155 6006 6.239714 GCCTAGTCCAATTGATCCATCTTAGA 60.240 42.308 7.12 0.00 0.00 2.10
4157 6008 5.369404 TGCCTAGTCCAATTGATCCATCTTA 59.631 40.000 7.12 0.00 0.00 2.10
4158 6009 4.166725 TGCCTAGTCCAATTGATCCATCTT 59.833 41.667 7.12 0.00 0.00 2.40
4160 6011 4.090761 TGCCTAGTCCAATTGATCCATC 57.909 45.455 7.12 0.00 0.00 3.51
4161 6012 4.736611 ATGCCTAGTCCAATTGATCCAT 57.263 40.909 7.12 0.00 0.00 3.41
4162 6013 5.848286 ATATGCCTAGTCCAATTGATCCA 57.152 39.130 7.12 0.00 0.00 3.41
4163 6014 7.337942 CCTTTATATGCCTAGTCCAATTGATCC 59.662 40.741 7.12 0.00 0.00 3.36
4164 6015 7.885399 ACCTTTATATGCCTAGTCCAATTGATC 59.115 37.037 7.12 0.00 0.00 2.92
4165 6016 7.759607 ACCTTTATATGCCTAGTCCAATTGAT 58.240 34.615 7.12 0.00 0.00 2.57
4166 6017 7.072454 AGACCTTTATATGCCTAGTCCAATTGA 59.928 37.037 7.12 0.00 0.00 2.57
4167 6018 7.227156 AGACCTTTATATGCCTAGTCCAATTG 58.773 38.462 0.00 0.00 0.00 2.32
4168 6019 7.072454 TGAGACCTTTATATGCCTAGTCCAATT 59.928 37.037 0.00 0.00 0.00 2.32
4169 6020 6.558775 TGAGACCTTTATATGCCTAGTCCAAT 59.441 38.462 0.00 0.00 0.00 3.16
4170 6021 5.903010 TGAGACCTTTATATGCCTAGTCCAA 59.097 40.000 0.00 0.00 0.00 3.53
4171 6022 5.464069 TGAGACCTTTATATGCCTAGTCCA 58.536 41.667 0.00 0.00 0.00 4.02
4172 6023 6.420913 TTGAGACCTTTATATGCCTAGTCC 57.579 41.667 0.00 0.00 0.00 3.85
4173 6024 7.272978 TGTTTGAGACCTTTATATGCCTAGTC 58.727 38.462 0.00 0.00 0.00 2.59
4174 6025 7.195374 TGTTTGAGACCTTTATATGCCTAGT 57.805 36.000 0.00 0.00 0.00 2.57
4175 6026 8.506168 TTTGTTTGAGACCTTTATATGCCTAG 57.494 34.615 0.00 0.00 0.00 3.02
4177 6028 7.961326 ATTTGTTTGAGACCTTTATATGCCT 57.039 32.000 0.00 0.00 0.00 4.75
4178 6029 9.736023 CTTATTTGTTTGAGACCTTTATATGCC 57.264 33.333 0.00 0.00 0.00 4.40
4184 6035 9.403583 ACACTTCTTATTTGTTTGAGACCTTTA 57.596 29.630 0.00 0.00 0.00 1.85
4185 6036 8.190784 CACACTTCTTATTTGTTTGAGACCTTT 58.809 33.333 0.00 0.00 0.00 3.11
4186 6037 7.556275 TCACACTTCTTATTTGTTTGAGACCTT 59.444 33.333 0.00 0.00 0.00 3.50
4187 6038 7.054124 TCACACTTCTTATTTGTTTGAGACCT 58.946 34.615 0.00 0.00 0.00 3.85
4188 6039 7.259290 TCACACTTCTTATTTGTTTGAGACC 57.741 36.000 0.00 0.00 0.00 3.85
4189 6040 9.010366 GTTTCACACTTCTTATTTGTTTGAGAC 57.990 33.333 0.00 0.00 0.00 3.36
4190 6041 8.956426 AGTTTCACACTTCTTATTTGTTTGAGA 58.044 29.630 0.00 0.00 27.32 3.27
4205 6056 9.529325 GGCTTAAAATTCTTTAGTTTCACACTT 57.471 29.630 0.00 0.00 36.88 3.16
4206 6057 8.141909 GGGCTTAAAATTCTTTAGTTTCACACT 58.858 33.333 0.00 0.00 39.87 3.55
4207 6058 8.141909 AGGGCTTAAAATTCTTTAGTTTCACAC 58.858 33.333 0.00 0.00 0.00 3.82
4208 6059 8.245195 AGGGCTTAAAATTCTTTAGTTTCACA 57.755 30.769 0.00 0.00 0.00 3.58
4209 6060 8.978539 CAAGGGCTTAAAATTCTTTAGTTTCAC 58.021 33.333 0.00 0.00 0.00 3.18
4210 6061 8.147704 CCAAGGGCTTAAAATTCTTTAGTTTCA 58.852 33.333 0.00 0.00 0.00 2.69
4211 6062 8.364894 TCCAAGGGCTTAAAATTCTTTAGTTTC 58.635 33.333 0.00 0.00 0.00 2.78
4212 6063 8.257602 TCCAAGGGCTTAAAATTCTTTAGTTT 57.742 30.769 0.00 0.00 0.00 2.66
4213 6064 7.849322 TCCAAGGGCTTAAAATTCTTTAGTT 57.151 32.000 0.00 0.00 0.00 2.24
4214 6065 8.435931 AATCCAAGGGCTTAAAATTCTTTAGT 57.564 30.769 0.00 0.00 0.00 2.24
4215 6066 7.981789 GGAATCCAAGGGCTTAAAATTCTTTAG 59.018 37.037 0.00 0.00 0.00 1.85
4216 6067 7.678171 AGGAATCCAAGGGCTTAAAATTCTTTA 59.322 33.333 0.61 0.00 0.00 1.85
4217 6068 6.501805 AGGAATCCAAGGGCTTAAAATTCTTT 59.498 34.615 0.61 0.00 0.00 2.52
4218 6069 6.025539 AGGAATCCAAGGGCTTAAAATTCTT 58.974 36.000 0.61 0.00 0.00 2.52
4219 6070 5.593786 AGGAATCCAAGGGCTTAAAATTCT 58.406 37.500 0.61 0.00 0.00 2.40
4220 6071 5.939764 AGGAATCCAAGGGCTTAAAATTC 57.060 39.130 0.61 0.00 0.00 2.17
4221 6072 5.363868 GCTAGGAATCCAAGGGCTTAAAATT 59.636 40.000 0.61 0.00 0.00 1.82
4222 6073 4.895889 GCTAGGAATCCAAGGGCTTAAAAT 59.104 41.667 0.61 0.00 0.00 1.82
4223 6074 4.278310 GCTAGGAATCCAAGGGCTTAAAA 58.722 43.478 0.61 0.00 0.00 1.52
4224 6075 3.372675 GGCTAGGAATCCAAGGGCTTAAA 60.373 47.826 0.61 0.00 0.00 1.52
4225 6076 2.174854 GGCTAGGAATCCAAGGGCTTAA 59.825 50.000 0.61 0.00 0.00 1.85
4226 6077 1.774856 GGCTAGGAATCCAAGGGCTTA 59.225 52.381 0.61 0.00 0.00 3.09
4227 6078 0.553333 GGCTAGGAATCCAAGGGCTT 59.447 55.000 0.61 0.00 0.00 4.35
4228 6079 0.327964 AGGCTAGGAATCCAAGGGCT 60.328 55.000 0.61 5.76 0.00 5.19
4229 6080 0.553333 AAGGCTAGGAATCCAAGGGC 59.447 55.000 0.61 3.37 0.00 5.19
4230 6081 3.291584 GAAAAGGCTAGGAATCCAAGGG 58.708 50.000 0.61 0.00 0.00 3.95
4231 6082 2.945668 CGAAAAGGCTAGGAATCCAAGG 59.054 50.000 0.61 0.00 0.00 3.61
4232 6083 3.610911 ACGAAAAGGCTAGGAATCCAAG 58.389 45.455 0.61 0.00 0.00 3.61
4233 6084 3.713826 ACGAAAAGGCTAGGAATCCAA 57.286 42.857 0.61 0.00 0.00 3.53
4234 6085 3.606687 GAACGAAAAGGCTAGGAATCCA 58.393 45.455 0.61 0.00 0.00 3.41
4235 6086 2.608090 CGAACGAAAAGGCTAGGAATCC 59.392 50.000 0.00 0.00 0.00 3.01
4236 6087 2.608090 CCGAACGAAAAGGCTAGGAATC 59.392 50.000 0.00 0.00 0.00 2.52
4237 6088 2.027469 ACCGAACGAAAAGGCTAGGAAT 60.027 45.455 0.00 0.00 0.00 3.01
4238 6089 1.345415 ACCGAACGAAAAGGCTAGGAA 59.655 47.619 0.00 0.00 0.00 3.36
4239 6090 0.971386 ACCGAACGAAAAGGCTAGGA 59.029 50.000 0.00 0.00 0.00 2.94
4240 6091 1.463444 CAACCGAACGAAAAGGCTAGG 59.537 52.381 0.00 0.00 0.00 3.02
4241 6092 2.140717 ACAACCGAACGAAAAGGCTAG 58.859 47.619 0.00 0.00 0.00 3.42
4242 6093 2.243602 ACAACCGAACGAAAAGGCTA 57.756 45.000 0.00 0.00 0.00 3.93
4243 6094 1.064952 CAACAACCGAACGAAAAGGCT 59.935 47.619 0.00 0.00 0.00 4.58
4244 6095 1.064357 TCAACAACCGAACGAAAAGGC 59.936 47.619 0.00 0.00 0.00 4.35
4245 6096 3.408288 TTCAACAACCGAACGAAAAGG 57.592 42.857 0.00 0.00 0.00 3.11
4246 6097 4.347813 ACATTCAACAACCGAACGAAAAG 58.652 39.130 0.00 0.00 0.00 2.27
4247 6098 4.358494 ACATTCAACAACCGAACGAAAA 57.642 36.364 0.00 0.00 0.00 2.29
4248 6099 4.099120 CAACATTCAACAACCGAACGAAA 58.901 39.130 0.00 0.00 0.00 3.46
4249 6100 3.374367 TCAACATTCAACAACCGAACGAA 59.626 39.130 0.00 0.00 0.00 3.85
4250 6101 2.937149 TCAACATTCAACAACCGAACGA 59.063 40.909 0.00 0.00 0.00 3.85
4251 6102 3.001838 TCTCAACATTCAACAACCGAACG 59.998 43.478 0.00 0.00 0.00 3.95
4252 6103 4.545823 TCTCAACATTCAACAACCGAAC 57.454 40.909 0.00 0.00 0.00 3.95
4253 6104 5.766150 AATCTCAACATTCAACAACCGAA 57.234 34.783 0.00 0.00 0.00 4.30
4254 6105 5.518812 CAAATCTCAACATTCAACAACCGA 58.481 37.500 0.00 0.00 0.00 4.69
4255 6106 4.148696 GCAAATCTCAACATTCAACAACCG 59.851 41.667 0.00 0.00 0.00 4.44
4256 6107 5.291971 AGCAAATCTCAACATTCAACAACC 58.708 37.500 0.00 0.00 0.00 3.77
4257 6108 6.833342 AAGCAAATCTCAACATTCAACAAC 57.167 33.333 0.00 0.00 0.00 3.32
4258 6109 8.980610 CATTAAGCAAATCTCAACATTCAACAA 58.019 29.630 0.00 0.00 0.00 2.83
4259 6110 8.358895 TCATTAAGCAAATCTCAACATTCAACA 58.641 29.630 0.00 0.00 0.00 3.33
4260 6111 8.642020 GTCATTAAGCAAATCTCAACATTCAAC 58.358 33.333 0.00 0.00 0.00 3.18
4261 6112 8.579006 AGTCATTAAGCAAATCTCAACATTCAA 58.421 29.630 0.00 0.00 0.00 2.69
4262 6113 8.114331 AGTCATTAAGCAAATCTCAACATTCA 57.886 30.769 0.00 0.00 0.00 2.57
4263 6114 8.857216 CAAGTCATTAAGCAAATCTCAACATTC 58.143 33.333 0.00 0.00 0.00 2.67
4264 6115 8.362639 ACAAGTCATTAAGCAAATCTCAACATT 58.637 29.630 0.00 0.00 0.00 2.71
4265 6116 7.889469 ACAAGTCATTAAGCAAATCTCAACAT 58.111 30.769 0.00 0.00 0.00 2.71
4266 6117 7.275888 ACAAGTCATTAAGCAAATCTCAACA 57.724 32.000 0.00 0.00 0.00 3.33
4267 6118 8.482429 CAAACAAGTCATTAAGCAAATCTCAAC 58.518 33.333 0.00 0.00 0.00 3.18
4268 6119 8.412456 TCAAACAAGTCATTAAGCAAATCTCAA 58.588 29.630 0.00 0.00 0.00 3.02
4269 6120 7.939782 TCAAACAAGTCATTAAGCAAATCTCA 58.060 30.769 0.00 0.00 0.00 3.27
4270 6121 8.857216 CATCAAACAAGTCATTAAGCAAATCTC 58.143 33.333 0.00 0.00 0.00 2.75
4271 6122 8.579006 TCATCAAACAAGTCATTAAGCAAATCT 58.421 29.630 0.00 0.00 0.00 2.40
4272 6123 8.746922 TCATCAAACAAGTCATTAAGCAAATC 57.253 30.769 0.00 0.00 0.00 2.17
4273 6124 9.146984 CATCATCAAACAAGTCATTAAGCAAAT 57.853 29.630 0.00 0.00 0.00 2.32
4274 6125 7.599621 CCATCATCAAACAAGTCATTAAGCAAA 59.400 33.333 0.00 0.00 0.00 3.68
4275 6126 7.039853 TCCATCATCAAACAAGTCATTAAGCAA 60.040 33.333 0.00 0.00 0.00 3.91
4276 6127 6.433716 TCCATCATCAAACAAGTCATTAAGCA 59.566 34.615 0.00 0.00 0.00 3.91
4277 6128 6.855836 TCCATCATCAAACAAGTCATTAAGC 58.144 36.000 0.00 0.00 0.00 3.09
4281 6132 9.811995 CAATATTCCATCATCAAACAAGTCATT 57.188 29.630 0.00 0.00 0.00 2.57
4282 6133 8.974238 ACAATATTCCATCATCAAACAAGTCAT 58.026 29.630 0.00 0.00 0.00 3.06
4283 6134 8.245491 CACAATATTCCATCATCAAACAAGTCA 58.755 33.333 0.00 0.00 0.00 3.41
4284 6135 8.246180 ACACAATATTCCATCATCAAACAAGTC 58.754 33.333 0.00 0.00 0.00 3.01
4285 6136 8.125978 ACACAATATTCCATCATCAAACAAGT 57.874 30.769 0.00 0.00 0.00 3.16
4288 6139 9.853555 GTTTACACAATATTCCATCATCAAACA 57.146 29.630 0.00 0.00 0.00 2.83
4289 6140 9.301153 GGTTTACACAATATTCCATCATCAAAC 57.699 33.333 0.00 0.00 0.00 2.93
4290 6141 9.253832 AGGTTTACACAATATTCCATCATCAAA 57.746 29.630 0.00 0.00 0.00 2.69
4291 6142 8.821686 AGGTTTACACAATATTCCATCATCAA 57.178 30.769 0.00 0.00 0.00 2.57
4292 6143 8.821686 AAGGTTTACACAATATTCCATCATCA 57.178 30.769 0.00 0.00 0.00 3.07
4293 6144 8.902806 TGAAGGTTTACACAATATTCCATCATC 58.097 33.333 0.00 0.00 0.00 2.92
4294 6145 8.821686 TGAAGGTTTACACAATATTCCATCAT 57.178 30.769 0.00 0.00 0.00 2.45
4295 6146 8.821686 ATGAAGGTTTACACAATATTCCATCA 57.178 30.769 0.00 0.00 0.00 3.07
4298 6149 9.703892 CAAAATGAAGGTTTACACAATATTCCA 57.296 29.630 0.00 0.00 0.00 3.53
4299 6150 9.921637 TCAAAATGAAGGTTTACACAATATTCC 57.078 29.630 0.00 0.00 0.00 3.01
4305 6156 9.743057 CAGTAATCAAAATGAAGGTTTACACAA 57.257 29.630 0.00 0.00 0.00 3.33
4306 6157 9.126151 TCAGTAATCAAAATGAAGGTTTACACA 57.874 29.630 0.00 0.00 0.00 3.72
4342 6193 1.678627 ACGTGTAGCCATGTGCAAAAA 59.321 42.857 8.58 0.00 44.83 1.94
4343 6194 1.313772 ACGTGTAGCCATGTGCAAAA 58.686 45.000 8.58 0.00 44.83 2.44
4344 6195 3.014037 ACGTGTAGCCATGTGCAAA 57.986 47.368 8.58 0.00 44.83 3.68
4345 6196 4.789977 ACGTGTAGCCATGTGCAA 57.210 50.000 8.58 0.00 44.83 4.08
4349 6200 1.301401 AACGCACGTGTAGCCATGT 60.301 52.632 18.38 2.06 41.54 3.21
4350 6201 1.132436 CAACGCACGTGTAGCCATG 59.868 57.895 18.38 8.26 0.00 3.66
4351 6202 2.677003 GCAACGCACGTGTAGCCAT 61.677 57.895 18.38 0.00 0.00 4.40
4352 6203 3.342627 GCAACGCACGTGTAGCCA 61.343 61.111 18.38 0.00 0.00 4.75
4353 6204 2.677003 ATGCAACGCACGTGTAGCC 61.677 57.895 18.38 0.00 43.04 3.93
4354 6205 1.509787 CATGCAACGCACGTGTAGC 60.510 57.895 18.38 15.68 43.04 3.58
4355 6206 0.450972 CACATGCAACGCACGTGTAG 60.451 55.000 18.38 14.07 45.72 2.74
4356 6207 1.567050 CACATGCAACGCACGTGTA 59.433 52.632 18.38 0.00 45.72 2.90
4357 6208 2.327592 CACATGCAACGCACGTGT 59.672 55.556 18.38 0.00 45.72 4.49
4368 6219 5.580691 TGTAGACTAGTAAATGTGCACATGC 59.419 40.000 31.98 23.12 36.56 4.06
4369 6220 7.595311 TTGTAGACTAGTAAATGTGCACATG 57.405 36.000 31.98 20.14 36.56 3.21
4370 6221 8.094548 TCTTTGTAGACTAGTAAATGTGCACAT 58.905 33.333 26.61 26.61 38.41 3.21
4371 6222 7.438564 TCTTTGTAGACTAGTAAATGTGCACA 58.561 34.615 24.08 24.08 0.00 4.57
4372 6223 7.884816 TCTTTGTAGACTAGTAAATGTGCAC 57.115 36.000 10.75 10.75 0.00 4.57
4373 6224 7.764443 GGATCTTTGTAGACTAGTAAATGTGCA 59.236 37.037 0.00 0.00 31.99 4.57
4374 6225 7.982354 AGGATCTTTGTAGACTAGTAAATGTGC 59.018 37.037 0.00 0.00 31.99 4.57
4375 6226 9.522804 GAGGATCTTTGTAGACTAGTAAATGTG 57.477 37.037 0.00 0.00 31.99 3.21
4376 6227 9.256228 TGAGGATCTTTGTAGACTAGTAAATGT 57.744 33.333 0.00 0.00 34.92 2.71
4380 6231 9.475620 TGAATGAGGATCTTTGTAGACTAGTAA 57.524 33.333 0.00 0.00 32.08 2.24
4381 6232 9.475620 TTGAATGAGGATCTTTGTAGACTAGTA 57.524 33.333 0.00 0.00 32.08 1.82
4382 6233 7.962995 TGAATGAGGATCTTTGTAGACTAGT 57.037 36.000 0.00 0.00 32.08 2.57
4383 6234 9.092876 GTTTGAATGAGGATCTTTGTAGACTAG 57.907 37.037 0.00 0.00 32.08 2.57
4384 6235 8.593679 TGTTTGAATGAGGATCTTTGTAGACTA 58.406 33.333 0.00 0.00 32.08 2.59
4385 6236 7.453393 TGTTTGAATGAGGATCTTTGTAGACT 58.547 34.615 0.00 0.00 32.08 3.24
4386 6237 7.148340 CCTGTTTGAATGAGGATCTTTGTAGAC 60.148 40.741 0.00 0.00 32.08 2.59
4387 6238 6.881065 CCTGTTTGAATGAGGATCTTTGTAGA 59.119 38.462 0.00 0.00 32.08 2.59
4388 6239 6.404074 GCCTGTTTGAATGAGGATCTTTGTAG 60.404 42.308 0.00 0.00 32.08 2.74
4389 6240 5.415701 GCCTGTTTGAATGAGGATCTTTGTA 59.584 40.000 0.00 0.00 32.08 2.41
4390 6241 4.219288 GCCTGTTTGAATGAGGATCTTTGT 59.781 41.667 0.00 0.00 32.08 2.83
4391 6242 4.219070 TGCCTGTTTGAATGAGGATCTTTG 59.781 41.667 0.00 0.00 32.08 2.77
4392 6243 4.219288 GTGCCTGTTTGAATGAGGATCTTT 59.781 41.667 0.00 0.00 34.92 2.52
4393 6244 3.760684 GTGCCTGTTTGAATGAGGATCTT 59.239 43.478 0.00 0.00 34.92 2.40
4394 6245 3.350833 GTGCCTGTTTGAATGAGGATCT 58.649 45.455 0.00 0.00 34.92 2.75
4395 6246 2.424956 GGTGCCTGTTTGAATGAGGATC 59.575 50.000 0.00 0.00 0.00 3.36
4396 6247 2.042162 AGGTGCCTGTTTGAATGAGGAT 59.958 45.455 0.00 0.00 0.00 3.24
4397 6248 1.425066 AGGTGCCTGTTTGAATGAGGA 59.575 47.619 0.00 0.00 0.00 3.71
4398 6249 1.915141 AGGTGCCTGTTTGAATGAGG 58.085 50.000 0.00 0.00 0.00 3.86
4399 6250 2.229784 GGAAGGTGCCTGTTTGAATGAG 59.770 50.000 0.00 0.00 0.00 2.90
4400 6251 2.238521 GGAAGGTGCCTGTTTGAATGA 58.761 47.619 0.00 0.00 0.00 2.57
4401 6252 1.273327 GGGAAGGTGCCTGTTTGAATG 59.727 52.381 0.00 0.00 0.00 2.67
4402 6253 1.632589 GGGAAGGTGCCTGTTTGAAT 58.367 50.000 0.00 0.00 0.00 2.57
4403 6254 0.469144 GGGGAAGGTGCCTGTTTGAA 60.469 55.000 0.00 0.00 0.00 2.69
4404 6255 1.152830 GGGGAAGGTGCCTGTTTGA 59.847 57.895 0.00 0.00 0.00 2.69
4405 6256 0.895559 GAGGGGAAGGTGCCTGTTTG 60.896 60.000 0.00 0.00 0.00 2.93
4406 6257 1.068352 AGAGGGGAAGGTGCCTGTTT 61.068 55.000 0.00 0.00 0.00 2.83
4407 6258 0.178873 TAGAGGGGAAGGTGCCTGTT 60.179 55.000 0.00 0.00 0.00 3.16
4408 6259 0.044855 ATAGAGGGGAAGGTGCCTGT 59.955 55.000 0.00 0.00 0.00 4.00
4409 6260 1.141858 GAATAGAGGGGAAGGTGCCTG 59.858 57.143 0.00 0.00 0.00 4.85
4410 6261 1.512735 GAATAGAGGGGAAGGTGCCT 58.487 55.000 0.00 0.00 0.00 4.75
4411 6262 0.474614 GGAATAGAGGGGAAGGTGCC 59.525 60.000 0.00 0.00 0.00 5.01
4412 6263 1.418264 GAGGAATAGAGGGGAAGGTGC 59.582 57.143 0.00 0.00 0.00 5.01
4413 6264 2.969262 GAGAGGAATAGAGGGGAAGGTG 59.031 54.545 0.00 0.00 0.00 4.00
4414 6265 2.425102 CGAGAGGAATAGAGGGGAAGGT 60.425 54.545 0.00 0.00 0.00 3.50
4415 6266 2.243810 CGAGAGGAATAGAGGGGAAGG 58.756 57.143 0.00 0.00 0.00 3.46
4416 6267 2.625790 CACGAGAGGAATAGAGGGGAAG 59.374 54.545 0.00 0.00 0.00 3.46
4417 6268 2.243994 TCACGAGAGGAATAGAGGGGAA 59.756 50.000 0.00 0.00 0.00 3.97
4418 6269 1.850998 TCACGAGAGGAATAGAGGGGA 59.149 52.381 0.00 0.00 0.00 4.81
4419 6270 1.957877 GTCACGAGAGGAATAGAGGGG 59.042 57.143 0.00 0.00 0.00 4.79
4420 6271 2.359531 GTGTCACGAGAGGAATAGAGGG 59.640 54.545 0.00 0.00 0.00 4.30
4421 6272 2.032302 CGTGTCACGAGAGGAATAGAGG 59.968 54.545 20.75 0.00 46.05 3.69
4422 6273 2.937149 TCGTGTCACGAGAGGAATAGAG 59.063 50.000 23.70 0.00 46.73 2.43
4423 6274 2.981898 TCGTGTCACGAGAGGAATAGA 58.018 47.619 23.70 0.00 46.73 1.98
4434 6285 4.406173 AGCTCGGCTCGTGTCACG 62.406 66.667 19.38 19.38 44.19 4.35
4435 6286 2.505118 GAGCTCGGCTCGTGTCAC 60.505 66.667 9.63 0.00 45.85 3.67
4454 6305 2.514824 GATGCAAGTCCGGAGCCC 60.515 66.667 3.06 0.00 0.00 5.19
4455 6306 1.817099 CAGATGCAAGTCCGGAGCC 60.817 63.158 3.06 0.00 0.00 4.70
4456 6307 2.467826 GCAGATGCAAGTCCGGAGC 61.468 63.158 3.06 5.64 41.59 4.70
4457 6308 2.169789 CGCAGATGCAAGTCCGGAG 61.170 63.158 3.06 0.00 42.21 4.63
4458 6309 2.125552 CGCAGATGCAAGTCCGGA 60.126 61.111 0.00 0.00 42.21 5.14
4459 6310 3.197790 CCGCAGATGCAAGTCCGG 61.198 66.667 5.55 0.00 42.21 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.